Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:42:25 (2660344): wrapper (7.7.26015): starting
16:42:25 (2660344): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 16:42:25] Arguments: --nthreads 12
[2025-06-02 16:42:25] Threads: 12
[2025-06-02 16:42:25] Checking for CVMFS
[2025-06-02 16:42:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 16:42:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 16:42:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 16:42:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 16:42:25] 2.11.5.0 1853674 30839 224156 146723 1 539 32025274 45568001 17446 130560 0 338842122 99.784 214179688 27041 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 16:42:25] CVMFS is ok
[2025-06-02 16:42:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 16:42:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 16:42:25] Further information can be found at the LHC@home message board.
[2025-06-02 16:42:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 16:42:25] Checking for apptainer binary...
[2025-06-02 16:42:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 16:42:25] Running /usr/bin/apptainer --version
[2025-06-02 16:42:25] apptainer version 1.4.0-1.el9
[2025-06-02 16:42:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 16:42:26] wns0050.triumf.lcg
[2025-06-02 16:42:26] apptainer works
[2025-06-02 16:42:26] Set ATHENA_PROC_NUMBER=12
[2025-06-02 16:42:26] Set ATHENA_CORE_NUMBER=12
[2025-06-02 16:42:26] Starting ATLAS job with PandaID=6677401588
[2025-06-02 16:42:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 16:45:26]  *** The last 200 lines of the pilot log: ***
[2025-06-02 16:45:26] 2025-06-02 23:45:12,526 | INFO     | extracted standard info from prmon json
[2025-06-02 16:45:26] 2025-06-02 23:45:12,526 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | WARNING  | found no stored workdir sizes
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | WARNING  | wrong length of table data, x=[1748907777.0], y=[1557.0] (must be same and length>=4)
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | ..............................
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . Timing measurements:
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . get job = 0 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . initial setup = 3 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . payload setup = 4 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . stage-in = 0 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . payload execution = 14 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . stage-out = 0 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . log creation = 0 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | ..............................
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 16:45:26] 2025-06-02 23:45:12,529 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677401588/pilotlog.txt
[2025-06-02 16:45:26] 2025-06-02 23:45:12,538 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 16:45:26] - Log from pilotlog.txt -
[2025-06-02 16:45:26] 2025-06-02 23:45:12,526 | INFO     | extracted standard info from prmon json
[2025-06-02 16:45:26] 2025-06-02 23:45:12,526 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | WARNING  | found no stored workdir sizes
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | WARNING  | wrong length of table data, x=[1748907777.0], y=[1557.0] (must be same and length>=4)
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | ..............................
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . Timing measurements:
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . get job = 0 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . initial setup = 3 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . payload setup = 4 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . stage-in = 0 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . payload execution = 14 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . stage-out = 0 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . log creation = 0 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | ..............................
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 16:45:26] 2025-06-02 23:45:12,529 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677401588/pilotlog.txt
[2025-06-02 16:45:26] 2025-06-02 23:45:12,538 | WARNING  | 
[2025-06-02 16:45:26] [begin log extracts]
[2025-06-02 16:45:26] - Log from pilotlog.txt -
[2025-06-02 16:45:26] 2025-06-02 23:45:12,526 | INFO     | extracted standard info from prmon json
[2025-06-02 16:45:26] 2025-06-02 23:45:12,526 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | WARNING  | found no stored workdir sizes
[2025-06-02 16:45:26] 2025-06-02 23:45:12,527 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | WARNING  | wrong length of table data, x=[1748907777.0], y=[1557.0] (must be same and length>=4)
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | ..............................
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . Timing measurements:
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . get job = 0 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . initial setup = 3 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . payload setup = 4 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . stage-in = 0 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . payload execution = 14 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . stage-out = 0 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | . log creation = 0 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | ..............................
[2025-06-02 16:45:26] 2025-06-02 23:45:12,528 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 16:45:26] 2025-06-02 23:45:12,529 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677401588/pilotlog.txt
[2025-06-02 16:45:26] [end log extracts]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,538 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 16:45:26] 2025-06-02 23:45:12,539 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 16:45:26] 2025-06-02 23:45:12,975 | INFO     | 
[2025-06-02 16:45:26] 2025-06-02 23:45:12,975 | INFO     | job summary report
[2025-06-02 16:45:26] 2025-06-02 23:45:12,975 | INFO     | --------------------------------------------------
[2025-06-02 16:45:26] 2025-06-02 23:45:12,975 | INFO     | PanDA job id: 6677401588
[2025-06-02 16:45:26] 2025-06-02 23:45:12,975 | INFO     | task id: 45006595
[2025-06-02 16:45:26] 2025-06-02 23:45:12,975 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 16:43:04,502 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 16:45:26] 2025-06-02 23:45:12,975 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 16:45:26] 2025-06-02 23:45:12,975 | INFO     | pilot state: failed 
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | transexitcode: 65
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | exeerrorcode: 65
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | exitcode: 65
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | cpuconsumptiontime: 16 s
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | nevents: 0
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | neventsw: 0
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | pid: 2673382
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | pgrp: 2673382
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | corecount: 12
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | event service: False
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | sizes: {0: 2405179, 1: 2405179, 4: 2405413, 11: 2405441, 22: 2428629, 23: 2432996, 24: 2432996, 144: 2433138}
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | --------------------------------------------------
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | 
[2025-06-02 16:45:26] 2025-06-02 23:45:12,976 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 16:45:26] 2025-06-02 23:45:12,992 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,992 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,992 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,992 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | job 6677401588 has completed (purged errors)
[2025-06-02 16:45:26] 2025-06-02 23:45:12,993 | INFO     | overall cleanup function is called
[2025-06-02 16:45:26] 2025-06-02 23:45:13,999 | INFO     | --- collectZombieJob: --- 10, [2673382]
[2025-06-02 16:45:26] 2025-06-02 23:45:13,999 | INFO     | zombie collector waiting for pid 2673382
[2025-06-02 16:45:26] 2025-06-02 23:45:13,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 16:45:26] 2025-06-02 23:45:13,999 | INFO     | collected zombie processes
[2025-06-02 16:45:26] 2025-06-02 23:45:13,999 | INFO     | will attempt to kill all subprocesses of pid=2673382
[2025-06-02 16:45:26] 2025-06-02 23:45:14,162 | INFO     | process IDs to be killed: [2673382] (in reverse order)
[2025-06-02 16:45:26] 2025-06-02 23:45:14,225 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 16:45:26] 2025-06-02 23:45:14,225 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 16:45:26] 2025-06-02 23:45:14,233 | INFO     | did not find any defunct processes belonging to 2673382
[2025-06-02 16:45:26] 2025-06-02 23:45:14,240 | INFO     | did not find any defunct processes belonging to 2673382
[2025-06-02 16:45:26] 2025-06-02 23:45:14,240 | INFO     | ready for new job
[2025-06-02 16:45:26] 2025-06-02 23:45:14,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 16:45:26] 2025-06-02 23:45:14,241 | INFO     | **************************************
[2025-06-02 16:45:26] 2025-06-02 23:45:14,242 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 16:45:26] 2025-06-02 23:45:14,242 | INFO     | **************************************
[2025-06-02 16:45:26] 2025-06-02 23:45:14,242 | INFO     | 
[2025-06-02 16:45:26] 2025-06-02 23:45:14,244 | INFO     | architecture information:
[2025-06-02 16:45:26] 2025-06-02 23:45:14,244 | INFO     | executing command: cat /etc/os-release
[2025-06-02 16:45:26] 2025-06-02 23:45:14,255 | INFO     | cat /etc/os-release:
[2025-06-02 16:45:26] NAME="CentOS Linux"
[2025-06-02 16:45:26] VERSION="7 (Core)"
[2025-06-02 16:45:26] ID="centos"
[2025-06-02 16:45:26] ID_LIKE="rhel fedora"
[2025-06-02 16:45:26] VERSION_ID="7"
[2025-06-02 16:45:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 16:45:26] ANSI_COLOR="0;31"
[2025-06-02 16:45:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 16:45:26] HOME_URL="https://www.centos.org/"
[2025-06-02 16:45:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 16:45:26] 
[2025-06-02 16:45:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 16:45:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 16:45:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 16:45:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 16:45:26] 
[2025-06-02 16:45:26] 2025-06-02 23:45:14,255 | INFO     | **************************************
[2025-06-02 16:45:26] 2025-06-02 23:45:14,757 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 16:45:26] 2025-06-02 23:45:14,769 | INFO     | sufficient remaining disk space (1783242948608 B)
[2025-06-02 16:45:26] 2025-06-02 23:45:14,769 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 16:45:26] 2025-06-02 23:45:14,769 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 16:45:26] 2025-06-02 23:45:14,769 | INFO     | update_server=False
[2025-06-02 16:45:26] 2025-06-02 23:45:14,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 16:45:26] 2025-06-02 23:45:15,165 | INFO     | all job control threads have been joined
[2025-06-02 16:45:26] 2025-06-02 23:45:15,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 16:45:26] 2025-06-02 23:45:15,386 | INFO     | aborting loop
[2025-06-02 16:45:26] 2025-06-02 23:45:15,416 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 16:45:26] 2025-06-02 23:45:15,420 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 16:45:26] 2025-06-02 23:45:15,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 16:45:26] 2025-06-02 23:45:15,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 16:45:26] 2025-06-02 23:45:15,774 | INFO     | [job] retrieve thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:15,808 | INFO     | all payload control threads have been joined
[2025-06-02 16:45:26] 2025-06-02 23:45:15,830 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:15,867 | INFO     | all data control threads have been joined
[2025-06-02 16:45:26] 2025-06-02 23:45:15,894 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:15,902 | INFO     | [payload] validate_post thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:16,057 | INFO     | [data] copytool_in thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:16,170 | INFO     | [job] control thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:16,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 16:45:26] 2025-06-02 23:45:16,391 | INFO     | [job] job monitor thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:16,442 | INFO     | [payload] failed_post thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:16,813 | INFO     | [payload] control thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:16,872 | INFO     | [data] control thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:17,031 | INFO     | [job] validate thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:17,088 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:17,187 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:17,422 | INFO     | [data] copytool_out thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:17,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 16:45:26] 2025-06-02 23:45:18,615 | INFO     | [job] queue monitor thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:20,269 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 16:45:26] 2025-06-02 23:45:21,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139786567710528)>', '<ExcThread(monitor, started 139785800767232)>']
[2025-06-02 16:45:26] 2025-06-02 23:45:22,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 16:45:26] 2025-06-02 23:45:22,455 | INFO     | [monitor] control thread has ended
[2025-06-02 16:45:26] 2025-06-02 23:45:26,718 | INFO     | all workflow threads have been joined
[2025-06-02 16:45:26] 2025-06-02 23:45:26,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 16:45:26] 2025-06-02 23:45:26,718 | INFO     | traces error code: 0
[2025-06-02 16:45:26] 2025-06-02 23:45:26,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 16:45:26] 2025-06-02 23:45:26,873 [wrapper] ==== pilot stdout END ====
[2025-06-02 16:45:26] 2025-06-02 23:45:26,875 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 16:45:26] 2025-06-02 23:45:26,877 [wrapper] pilotpid: 2665999
[2025-06-02 16:45:26] 2025-06-02 23:45:26,879 [wrapper] Pilot exit status: 0
[2025-06-02 16:45:26] 2025-06-02 23:45:26,887 [wrapper] pandaids: 6677401588
[2025-06-02 16:45:26] 2025-06-02 23:45:26,927 [wrapper] cleanup supervisor_pilot 2666005 2666000
[2025-06-02 16:45:26] 2025-06-02 23:45:26,930 [wrapper] Test setup, not cleaning
[2025-06-02 16:45:26] 2025-06-02 23:45:26,932 [wrapper] apfmon messages muted
[2025-06-02 16:45:26] 2025-06-02 23:45:26,934 [wrapper] ==== wrapper stdout END ====
[2025-06-02 16:45:26] 2025-06-02 23:45:26,936 [wrapper] ==== wrapper stderr END ====
[2025-06-02 16:45:26]  *** Error codes and diagnostics ***
[2025-06-02 16:45:26]     "exeErrorCode": 65,
[2025-06-02 16:45:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 16:45:26]     "pilotErrorCode": 1305,
[2025-06-02 16:45:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 16:45:26]  *** Listing of results directory ***
[2025-06-02 16:45:26] total 212372
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc    495897 Jun  2 14:10 pilot3.tar.gz
[2025-06-02 16:45:26] -rwx------. 1 boinc boinc     37140 Jun  2 14:24 runpilot2-wrapper.sh
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc      5111 Jun  2 14:24 queuedata.json
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc       100 Jun  2 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 16:45:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 16:42 run_atlas
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc       105 Jun  2 16:42 job.xml
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc      6601 Jun  2 16:42 init_data.xml
[2025-06-02 16:45:26] -rw-r--r--. 2 boinc boinc 213442155 Jun  2 16:42 EVNT.45006593._000490.pool.root.1
[2025-06-02 16:45:26] -rw-r--r--. 2 boinc boinc     15093 Jun  2 16:42 start_atlas.sh
[2025-06-02 16:45:26] drwxrwx--x. 2 boinc boinc      4096 Jun  2 16:42 shared
[2025-06-02 16:45:26] -rw-r--r--. 2 boinc boinc    508874 Jun  2 16:42 input.tar.gz
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc         0 Jun  2 16:42 boinc_lockfile
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc      2524 Jun  2 16:42 pandaJob.out
[2025-06-02 16:45:26] -rw-------. 1 boinc boinc    988081 Jun  2 16:42 agis_schedconf.cvmfs.json
[2025-06-02 16:45:26] -rw-------. 1 boinc boinc   1603667 Jun  2 16:42 agis_ddmendpoints.agis.ALL.json
[2025-06-02 16:45:26] drwx------. 4 boinc boinc      4096 Jun  2 16:42 pilot3
[2025-06-02 16:45:26] -rw-------. 1 boinc boinc       983 Jun  2 16:43 memory_monitor_summary.json
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc       522 Jun  2 16:43 boinc_task_state.xml
[2025-06-02 16:45:26] -rw-------. 1 boinc boinc     20542 Jun  2 16:43 log.45006595._012242.job.log.tgz.1
[2025-06-02 16:45:26] -rw-------. 1 boinc boinc        95 Jun  2 16:44 pilot_heartbeat.json
[2025-06-02 16:45:26] -rw-------. 1 boinc boinc      8354 Jun  2 16:45 heartbeat.json
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc      8192 Jun  2 16:45 boinc_mmap_file
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc        22 Jun  2 16:45 wrapper_checkpoint.txt
[2025-06-02 16:45:26] -rw-------. 1 boinc boinc      4352 Jun  2 16:45 pilotlog.txt
[2025-06-02 16:45:26] -rw-------. 1 boinc boinc     73105 Jun  2 16:45 log.45006595._012242.job.log.1
[2025-06-02 16:45:26] -rw-------. 1 boinc boinc       188 Jun  2 16:45 output.list
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc       620 Jun  2 16:45 runtime_log
[2025-06-02 16:45:26] -rw-------. 1 boinc boinc    112640 Jun  2 16:45 result.tar.gz
[2025-06-02 16:45:26] -rw-------. 1 boinc boinc       645 Jun  2 16:45 wF7KDmEpRg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtmgKDmAF0jbm.diag
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc      8484 Jun  2 16:45 runtime_log.err
[2025-06-02 16:45:26] -rw-r--r--. 1 boinc boinc     21451 Jun  2 16:45 stderr.txt
[2025-06-02 16:45:27] No HITS result produced
[2025-06-02 16:45:27]  *** Contents of shared directory: ***
[2025-06-02 16:45:27] total 209072
[2025-06-02 16:45:27] -rw-r--r--. 2 boinc boinc 213442155 Jun  2 16:42 ATLAS.root_0
[2025-06-02 16:45:27] -rw-r--r--. 2 boinc boinc     15093 Jun  2 16:42 start_atlas.sh
[2025-06-02 16:45:27] -rw-r--r--. 2 boinc boinc    508874 Jun  2 16:42 input.tar.gz
[2025-06-02 16:45:27] -rw-------. 1 boinc boinc    112640 Jun  2 16:45 result.tar.gz
16:45:28 (2660344): run_atlas exited; CPU time 19.168631
16:45:28 (2660344): called boinc_finish(0)

</stderr_txt>
]]>

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