Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:34:22 (2823): wrapper (7.7.26015): starting
08:34:22 (2823): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:34:22] Arguments: --nthreads 8
[2025-06-03 08:34:22] Threads: 8
[2025-06-03 08:34:22] Checking for CVMFS
[2025-06-03 08:34:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:34:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:34:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:34:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:34:22] 2.11.2.0 408 31414 98012 146731 2 154 20871337 25165824 4053 130560 0 15537049 99.799 17598460 1948 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:34:22] CVMFS is ok
[2025-06-03 08:34:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:34:22] Checking for apptainer binary...
[2025-06-03 08:34:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:34:22] Running /usr/bin/apptainer --version
[2025-06-03 08:34:22] apptainer version 1.3.2-1.el7
[2025-06-03 08:34:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:34:24] cg-vwn429.simple-grid.lan
[2025-06-03 08:34:24] apptainer works
[2025-06-03 08:34:24] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:34:24] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:34:24] Starting ATLAS job with PandaID=6677395925
[2025-06-03 08:34:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:22:17]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:22:17] 2025-06-03 10:25:15,105 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:22:17] 2025-06-03 10:25:15,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:22:17] 2025-06-03 10:25:15,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:22:17] 2025-06-03 10:25:15,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:22:17] 2025-06-03 10:25:15,110 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:22:17] 2025-06-03 10:25:15,111 | INFO     | sum of square deviations: 3485088600.0
[2025-06-03 17:22:17] 2025-06-03 10:25:15,113 | INFO     | sum of deviations: -34879929198.0
[2025-06-03 17:22:17] 2025-06-03 10:25:15,113 | INFO     | mean x: 1748939397.5
[2025-06-03 17:22:17] 2025-06-03 10:25:15,113 | INFO     | mean y: 2520985.625
[2025-06-03 17:22:17] 2025-06-03 10:25:15,113 | INFO     | -- intersect: 17506489853.559315
[2025-06-03 17:22:17] 2025-06-03 10:25:15,113 | INFO     | intersect: 17506489853.559315
[2025-06-03 17:22:17] 2025-06-03 10:25:15,113 | INFO     | chi2: 2.8608726455867948
[2025-06-03 17:22:17] 2025-06-03 10:25:15,114 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 17:22:17] 2025-06-03 10:25:15,116 | INFO     | sum of deviations: -18218743669.000015
[2025-06-03 17:22:17] 2025-06-03 10:25:15,116 | INFO     | mean x: 1748939245.0
[2025-06-03 17:22:17] 2025-06-03 10:25:15,116 | INFO     | mean y: 2531933.178082192
[2025-06-03 17:22:17] 2025-06-03 10:25:15,117 | INFO     | -- intersect: 9785968543.014336
[2025-06-03 17:22:17] 2025-06-03 10:25:15,117 | INFO     | intersect: 9785968543.014336
[2025-06-03 17:22:17] 2025-06-03 10:25:15,117 | INFO     | chi2: 2.0287871796127406
[2025-06-03 17:22:17] 2025-06-03 10:25:15,117 | INFO     | current chi2=2.0287871796127406 (change=29.085022965200352 %)
[2025-06-03 17:22:17] 2025-06-03 10:25:15,118 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 17:22:17] 2025-06-03 10:25:15,120 | INFO     | sum of deviations: -17246146279.5
[2025-06-03 17:22:17] 2025-06-03 10:25:15,120 | INFO     | mean x: 1748939092.5
[2025-06-03 17:22:17] 2025-06-03 10:25:15,120 | INFO     | mean y: 2532613.5934579438
[2025-06-03 17:22:17] 2025-06-03 10:25:15,120 | INFO     | -- intersect: 9928126232.021978
[2025-06-03 17:22:17] 2025-06-03 10:25:15,120 | INFO     | intersect: 9928126232.021978
[2025-06-03 17:22:17] 2025-06-03 10:25:15,121 | INFO     | chi2: 2.028223266955482
[2025-06-03 17:22:17] 2025-06-03 10:25:15,121 | INFO     | current chi2=2.028223266955482 (change=0.0277955550451767 %)
[2025-06-03 17:22:17] 2025-06-03 10:25:15,121 | INFO     | right removable region: 213
[2025-06-03 17:22:17] 2025-06-03 10:25:15,121 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 17:22:17] 2025-06-03 10:25:15,123 | INFO     | sum of deviations: -76496398032.00003
[2025-06-03 17:22:17] 2025-06-03 10:25:15,123 | INFO     | mean x: 1748939550.0
[2025-06-03 17:22:17] 2025-06-03 10:25:15,123 | INFO     | mean y: 2548576.926940639
[2025-06-03 17:22:17] 2025-06-03 10:25:15,124 | INFO     | -- intersect: 41081000809.3077
[2025-06-03 17:22:17] 2025-06-03 10:25:15,124 | INFO     | intersect: 41081000809.3077
[2025-06-03 17:22:17] 2025-06-03 10:25:15,124 | INFO     | chi2: 1.0905145285732354
[2025-06-03 17:22:17] 2025-06-03 10:25:15,124 | INFO     | current chi2=1.0905145285732354 (change=61.88175205018399 %)
[2025-06-03 17:22:17] 2025-06-03 10:25:15,125 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 17:22:17] 2025-06-03 10:25:15,127 | INFO     | sum of deviations: -77133444303.49998
[2025-06-03 17:22:17] 2025-06-03 10:25:15,127 | INFO     | mean x: 1748939702.5
[2025-06-03 17:22:17] 2025-06-03 10:25:15,127 | INFO     | mean y: 2548986.612149533
[2025-06-03 17:22:17] 2025-06-03 10:25:15,127 | INFO     | -- intersect: 44394813621.5685
[2025-06-03 17:22:17] 2025-06-03 10:25:15,127 | INFO     | intersect: 44394813621.5685
[2025-06-03 17:22:17] 2025-06-03 10:25:15,128 | INFO     | chi2: 1.061283250579915
[2025-06-03 17:22:17] 2025-06-03 10:25:15,146 | INFO     | current chi2=1.061283250579915 (change=2.6805033062296606 %)
[2025-06-03 17:22:17] 2025-06-03 10:25:15,146 | INFO     | left removable region: 20
[2025-06-03 17:22:17] 2025-06-03 10:25:15,147 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 17:22:17] 2025-06-03 10:25:15,148 | INFO     | sum of deviations: -47105236085.00001
[2025-06-03 17:22:17] 2025-06-03 10:25:15,148 | INFO     | mean x: 1748939672.0
[2025-06-03 17:22:17] 2025-06-03 10:25:15,148 | INFO     | mean y: 2553666.8082901556
[2025-06-03 17:22:17] 2025-06-03 10:25:15,148 | INFO     | -- intersect: 36960286557.57905
[2025-06-03 17:22:17] 2025-06-03 10:25:15,148 | INFO     | intersect: 36960286557.57905
[2025-06-03 17:22:17] 2025-06-03 10:25:15,149 | INFO     | chi2: 0.18723250069270028
[2025-06-03 17:22:17] 2025-06-03 10:25:15,149 | INFO     | -- intersect: 36960286557.57905
[2025-06-03 17:22:17] 2025-06-03 10:25:15,149 | INFO     | current memory leak: -21.13 B/s (using 193 data points, chi2=0.19)
[2025-06-03 17:22:17] 2025-06-03 10:25:15,150 | INFO     | ..............................
[2025-06-03 17:22:17] 2025-06-03 10:25:15,150 | INFO     | . Timing measurements:
[2025-06-03 17:22:17] 2025-06-03 10:25:15,150 | INFO     | . get job = 0 s
[2025-06-03 17:22:17] 2025-06-03 10:25:15,150 | INFO     | . initial setup = 3 s
[2025-06-03 17:22:17] 2025-06-03 10:25:15,150 | INFO     | . payload setup = 34 s
[2025-06-03 17:22:17] 2025-06-03 10:25:15,150 | INFO     | . stage-in = 0 s
[2025-06-03 17:22:17] 2025-06-03 10:25:15,150 | INFO     | . payload execution = 13659 s
[2025-06-03 17:22:17] 2025-06-03 10:25:15,151 | INFO     | . stage-out = 4 s
[2025-06-03 17:22:17] 2025-06-03 10:25:15,151 | INFO     | . log creation = 1 s
[2025-06-03 17:22:17] 2025-06-03 10:25:15,151 | INFO     | ..............................
[2025-06-03 17:22:17] 2025-06-03 10:25:15,323 | INFO     | 
[2025-06-03 17:22:17] 2025-06-03 10:25:15,324 | INFO     | job summary report
[2025-06-03 17:22:17] 2025-06-03 10:25:15,324 | INFO     | --------------------------------------------------
[2025-06-03 17:22:17] 2025-06-03 10:25:15,324 | INFO     | PanDA job id: 6677395925
[2025-06-03 17:22:17] 2025-06-03 10:25:15,324 | INFO     | task id: 45006595
[2025-06-03 17:22:17] 2025-06-03 10:25:15,324 | INFO     | errors: (none)
[2025-06-03 17:22:17] 2025-06-03 10:25:15,324 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:22:17] 2025-06-03 10:25:15,324 | INFO     | pilot state: finished 
[2025-06-03 17:22:17] 2025-06-03 10:25:15,324 | INFO     | transexitcode: 0
[2025-06-03 17:22:17] 2025-06-03 10:25:15,325 | INFO     | exeerrorcode: 0
[2025-06-03 17:22:17] 2025-06-03 10:25:15,325 | INFO     | exeerrordiag: 
[2025-06-03 17:22:17] 2025-06-03 10:25:15,325 | INFO     | exitcode: 0
[2025-06-03 17:22:17] 2025-06-03 10:25:15,325 | INFO     | exitmsg: OK
[2025-06-03 17:22:17] 2025-06-03 10:25:15,325 | INFO     | cpuconsumptiontime: 51485 s
[2025-06-03 17:22:17] 2025-06-03 10:25:15,325 | INFO     | nevents: 400
[2025-06-03 17:22:17] 2025-06-03 10:25:15,325 | INFO     | neventsw: 0
[2025-06-03 17:22:17] 2025-06-03 10:25:15,325 | INFO     | pid: 18155
[2025-06-03 17:22:17] 2025-06-03 10:25:15,325 | INFO     | pgrp: 18155
[2025-06-03 17:22:17] 2025-06-03 10:25:15,325 | INFO     | corecount: 8
[2025-06-03 17:22:17] 2025-06-03 10:25:15,325 | INFO     | event service: False
[2025-06-03 17:22:17] 2025-06-03 10:25:15,326 | INFO     | sizes: {0: 2405007, 1: 2405206, 12: 2405206, 16: 2405440, 23: 2405468, 13697: 2435293, 13702: 2444236, 13705: 2444292, 13792: 2444462}
[2025-06-03 17:22:17] 2025-06-03 10:25:15,326 | INFO     | --------------------------------------------------
[2025-06-03 17:22:17] 2025-06-03 10:25:15,326 | INFO     | 
[2025-06-03 17:22:17] 2025-06-03 10:25:15,326 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 17:22:17] 2025-06-03 10:25:15,937 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,938 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,938 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,938 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,938 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,939 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,939 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,939 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,939 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:22:17] 2025-06-03 10:25:15,939 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,940 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:22:17] 2025-06-03 10:25:15,940 | INFO     | job 6677395925 has completed (purged errors)
[2025-06-03 17:22:17] 2025-06-03 10:25:15,940 | INFO     | overall cleanup function is called
[2025-06-03 17:22:17] 2025-06-03 10:25:16,949 | INFO     | --- collectZombieJob: --- 10, [18155]
[2025-06-03 17:22:17] 2025-06-03 10:25:16,949 | INFO     | zombie collector waiting for pid 18155
[2025-06-03 17:22:17] 2025-06-03 10:25:16,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:22:17] 2025-06-03 10:25:16,950 | INFO     | collected zombie processes
[2025-06-03 17:22:17] 2025-06-03 10:25:16,950 | INFO     | will attempt to kill all subprocesses of pid=18155
[2025-06-03 17:22:17] 2025-06-03 10:25:17,271 | INFO     | process IDs to be killed: [18155] (in reverse order)
[2025-06-03 17:22:17] 2025-06-03 10:25:17,324 | INFO     | PID=6468 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 17:22:17] 2025-06-03 10:25:17,324 | INFO     | .. there are 9 such processes running
[2025-06-03 17:22:17] 2025-06-03 10:25:18,027 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:22:17] 2025-06-03 10:25:18,027 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:22:17] 2025-06-03 10:25:18,030 | INFO     | did not find any defunct processes belonging to 18155
[2025-06-03 17:22:17] 2025-06-03 10:25:18,033 | INFO     | did not find any defunct processes belonging to 18155
[2025-06-03 17:22:17] 2025-06-03 10:25:18,034 | INFO     | ready for new job
[2025-06-03 17:22:17] 2025-06-03 10:25:18,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:22:17] 2025-06-03 10:25:18,036 | INFO     | **************************************
[2025-06-03 17:22:17] 2025-06-03 10:25:18,036 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:22:17] 2025-06-03 10:25:18,036 | INFO     | **************************************
[2025-06-03 17:22:17] 2025-06-03 10:25:18,036 | INFO     | 
[2025-06-03 17:22:17] 2025-06-03 10:25:18,037 | INFO     | pilot is running in a VM
[2025-06-03 17:22:17] 2025-06-03 10:25:18,037 | INFO     | architecture information:
[2025-06-03 17:22:17] 2025-06-03 10:25:18,042 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:22:17] 2025-06-03 10:25:18,332 | INFO     | cat /etc/os-release:
[2025-06-03 17:22:17] NAME="CentOS Linux"
[2025-06-03 17:22:17] VERSION="7 (Core)"
[2025-06-03 17:22:17] ID="centos"
[2025-06-03 17:22:17] ID_LIKE="rhel fedora"
[2025-06-03 17:22:17] VERSION_ID="7"
[2025-06-03 17:22:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:22:17] ANSI_COLOR="0;31"
[2025-06-03 17:22:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:22:17] HOME_URL="https://www.centos.org/"
[2025-06-03 17:22:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:22:17] 
[2025-06-03 17:22:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:22:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:22:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:22:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:22:17] 
[2025-06-03 17:22:17] 2025-06-03 10:25:18,333 | INFO     | **************************************
[2025-06-03 17:22:17] 2025-06-03 10:25:18,836 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 17:22:17] 2025-06-03 10:25:19,027 | INFO     | sufficient remaining disk space (496816357376 B)
[2025-06-03 17:22:17] 2025-06-03 10:25:19,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:22:17] 2025-06-03 10:25:19,027 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:22:17] 2025-06-03 10:25:19,028 | INFO     | update_server=False
[2025-06-03 17:22:17] 2025-06-03 10:25:19,028 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:22:17] 2025-06-03 10:25:19,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:22:17] 2025-06-03 10:25:19,034 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:22:17] 2025-06-03 10:25:19,034 | INFO     | aborting loop
[2025-06-03 17:22:17] 2025-06-03 10:25:19,332 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:22:17] 2025-06-03 10:25:19,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:22:17] 2025-06-03 10:25:19,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:22:17] 2025-06-03 10:25:19,754 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:22:17] 2025-06-03 10:25:19,780 | INFO     | all data control threads have been joined
[2025-06-03 17:22:17] 2025-06-03 10:25:20,034 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:20,040 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:20,156 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:20,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:22:17] 2025-06-03 10:25:20,437 | INFO     | all payload control threads have been joined
[2025-06-03 17:22:17] 2025-06-03 10:25:20,619 | INFO     | all job control threads have been joined
[2025-06-03 17:22:17] 2025-06-03 10:25:20,686 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:20,786 | INFO     | [data] control thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:20,802 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:21,039 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:21,082 | INFO     | [job] validate thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:21,269 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:21,323 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:21,343 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:21,345 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:21,373 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:21,444 | INFO     | [payload] control thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:21,624 | INFO     | [job] control thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:23,763 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:22:17] 2025-06-03 10:25:24,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140478250399552)>', '<ExcThread(monitor, started 140477793801984)>']
[2025-06-03 17:22:17] 2025-06-03 10:25:25,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:22:17] 2025-06-03 10:25:25,370 | INFO     | [monitor] control thread has ended
[2025-06-03 17:22:17] 2025-06-03 10:25:29,690 | INFO     | all workflow threads have been joined
[2025-06-03 17:22:17] 2025-06-03 10:25:29,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:22:17] 2025-06-03 10:25:29,691 | INFO     | traces error code: 0
[2025-06-03 17:22:17] 2025-06-03 10:25:29,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:22:17] 2025-06-03 10:25:29,983 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:22:17] 2025-06-03 10:25:30,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:22:17] 2025-06-03 10:25:30,195 [wrapper] pilotpid: 6468
[2025-06-03 17:22:17] 2025-06-03 10:25:30,256 [wrapper] Pilot exit status: 0
[2025-06-03 17:22:17] 2025-06-03 10:25:30,724 [wrapper] pandaids: 6677395925
[2025-06-03 17:22:17] 2025-06-03 10:25:31,296 [wrapper] cleanup supervisor_pilot 24570 6469
[2025-06-03 17:22:17] 2025-06-03 10:25:31,338 [wrapper] Test setup, not cleaning
[2025-06-03 17:22:17] 2025-06-03 10:25:31,424 [wrapper] apfmon messages muted
[2025-06-03 17:22:17] 2025-06-03 10:25:31,440 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:22:17] 2025-06-03 10:25:31,452 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:22:17]  *** Error codes and diagnostics ***
[2025-06-03 17:22:17]     "exeErrorCode": 0,
[2025-06-03 17:22:17]     "exeErrorDiag": "",
[2025-06-03 17:22:17]     "pilotErrorCode": 0,
[2025-06-03 17:22:17]     "pilotErrorDiag": "",
[2025-06-03 17:22:17]  *** Listing of results directory ***
[2025-06-03 17:22:17] total 399240
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:34 pilot3.tar.gz
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:40 queuedata.json
[2025-06-03 17:22:17] -rwx------. 1 boinc boinc     37140 Jun  2 21:41 runpilot2-wrapper.sh
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:22:17] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:34 run_atlas
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:34 job.xml
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc      6393 Jun  3 08:34 init_data.xml
[2025-06-03 17:22:17] -rw-r--r--. 2 boinc boinc 213879559 Jun  3 08:34 EVNT.45006593._000393.pool.root.1
[2025-06-03 17:22:17] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:34 start_atlas.sh
[2025-06-03 17:22:17] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:34 shared
[2025-06-03 17:22:17] -rw-r--r--. 2 boinc boinc    508877 Jun  3 08:34 input.tar.gz
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:34 boinc_lockfile
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc      2521 Jun  3 08:34 pandaJob.out
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc    986901 Jun  3 08:34 agis_schedconf.cvmfs.json
[2025-06-03 17:22:17] drwx------. 4 boinc boinc      4096 Jun  3 08:34 pilot3
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc 187951606 Jun  3 12:22 HITS.45006595._009821.pool.root.1
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc       531 Jun  3 12:22 boinc_task_state.xml
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc      1018 Jun  3 12:23 memory_monitor_summary.json
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc   1603667 Jun  3 12:23 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc    392038 Jun  3 12:23 log.45006595._009821.job.log.tgz.1
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc        95 Jun  3 12:25 pilot_heartbeat.json
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc      7689 Jun  3 12:25 heartbeat.json
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc      4417 Jun  3 12:25 pilotlog.txt
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc   1191831 Jun  3 12:25 log.45006595._009821.job.log.1
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc       357 Jun  3 12:25 output.list
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:25 runtime_log
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc   1607680 Jun  3 12:25 result.tar.gz
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc      8673 Jun  3 12:25 runtime_log.err
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc       656 Jun  3 12:25 4iHODmADQg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0MgKDmw24CIo.diag
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc      8192 Jun  3 17:22 boinc_mmap_file
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc        28 Jun  3 17:22 wrapper_checkpoint.txt
[2025-06-03 17:22:17] -rw-r--r--. 1 boinc boinc     20541 Jun  3 17:22 stderr.txt
[2025-06-03 17:22:17] HITS file was successfully produced:
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc 187951606 Jun  3 12:22 shared/HITS.pool.root.1
[2025-06-03 17:22:17]  *** Contents of shared directory: ***
[2025-06-03 17:22:17] total 394504
[2025-06-03 17:22:17] -rw-r--r--. 2 boinc boinc 213879559 Jun  3 08:34 ATLAS.root_0
[2025-06-03 17:22:17] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:34 start_atlas.sh
[2025-06-03 17:22:17] -rw-r--r--. 2 boinc boinc    508877 Jun  3 08:34 input.tar.gz
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc 187951606 Jun  3 12:22 HITS.pool.root.1
[2025-06-03 17:22:17] -rw-------. 1 boinc boinc   1607680 Jun  3 12:25 result.tar.gz
17:22:19 (2823): run_atlas exited; CPU time 51656.037072
17:22:19 (2823): called boinc_finish(0)

</stderr_txt>
]]>

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