Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:57:41 (24822): wrapper (7.7.26015): starting
06:57:41 (24822): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:57:41] Arguments: --nthreads 8
[2025-06-03 06:57:41] Threads: 8
[2025-06-03 06:57:41] Checking for CVMFS
[2025-06-03 06:57:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:57:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:57:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:57:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:57:43] 2.11.2.0 30898 31306 89540 146729 3 60 23300110 25165825 4632 130560 0 15579578 99.806 18055395 2318 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 06:57:43] CVMFS is ok
[2025-06-03 06:57:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:57:43] Checking for apptainer binary...
[2025-06-03 06:57:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:57:43] Running /usr/bin/apptainer --version
[2025-06-03 06:57:43] apptainer version 1.3.2-1.el7
[2025-06-03 06:57:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:45:45] cg-vwn285.simple-grid.lan
[2025-06-03 07:45:45] apptainer works
[2025-06-03 07:45:45] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:45:45] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:45:45] Starting ATLAS job with PandaID=6677394622
[2025-06-03 07:45:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:13:17]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:13:17] 2025-06-03 09:30:49,885 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6677394622/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:13:17] 2025-06-03 09:30:49,886 | INFO     | extracted standard info from prmon json
[2025-06-03 13:13:17] 2025-06-03 09:30:49,886 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:13:17] 2025-06-03 09:30:49,887 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:13:17] 2025-06-03 09:30:49,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:13:17] 2025-06-03 09:30:49,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:13:17] 2025-06-03 09:30:49,893 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:13:17] 2025-06-03 09:30:49,893 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 13:13:17] 2025-06-03 09:30:49,895 | INFO     | sum of deviations: -13312208272.5
[2025-06-03 13:13:17] 2025-06-03 09:30:49,895 | INFO     | mean x: 1748936276.5
[2025-06-03 13:13:17] 2025-06-03 09:30:49,896 | INFO     | mean y: 2489107.380733945
[2025-06-03 13:13:17] 2025-06-03 09:30:49,896 | INFO     | -- intersect: 7249940701.340313
[2025-06-03 13:13:17] 2025-06-03 09:30:49,896 | INFO     | intersect: 7249940701.340313
[2025-06-03 13:13:17] 2025-06-03 09:30:49,896 | INFO     | chi2: 2.8192392652169227
[2025-06-03 13:13:17] 2025-06-03 09:30:49,897 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 13:13:17] 2025-06-03 09:30:49,898 | INFO     | sum of deviations: 1352835613.0000138
[2025-06-03 13:13:17] 2025-06-03 09:30:49,898 | INFO     | mean x: 1748936124.0
[2025-06-03 13:13:17] 2025-06-03 09:30:49,899 | INFO     | mean y: 2499271.408450704
[2025-06-03 13:13:17] 2025-06-03 09:30:49,899 | INFO     | -- intersect: -787108317.8139316
[2025-06-03 13:13:17] 2025-06-03 09:30:49,899 | INFO     | intersect: -787108317.8139316
[2025-06-03 13:13:17] 2025-06-03 09:30:49,899 | INFO     | chi2: 2.0526029537412587
[2025-06-03 13:13:17] 2025-06-03 09:30:49,899 | INFO     | current chi2=2.0526029537412587 (change=27.19302050500762 %)
[2025-06-03 13:13:17] 2025-06-03 09:30:49,900 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 13:13:17] 2025-06-03 09:30:49,901 | INFO     | sum of deviations: 1352390221.5000036
[2025-06-03 13:13:17] 2025-06-03 09:30:49,902 | INFO     | mean x: 1748935971.5
[2025-06-03 13:13:17] 2025-06-03 09:30:49,902 | INFO     | mean y: 2499271.081730769
[2025-06-03 13:13:17] 2025-06-03 09:30:49,902 | INFO     | -- intersect: -845152632.5504175
[2025-06-03 13:13:17] 2025-06-03 09:30:49,902 | INFO     | intersect: -845152632.5504175
[2025-06-03 13:13:17] 2025-06-03 09:30:49,902 | INFO     | chi2: 2.05281285750552
[2025-06-03 13:13:17] 2025-06-03 09:30:49,902 | INFO     | current chi2=2.05281285750552 (change=-0.010226223433934005 %)
[2025-06-03 13:13:17] 2025-06-03 09:30:49,903 | INFO     | right removable region: 207
[2025-06-03 13:13:17] 2025-06-03 09:30:49,903 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 13:13:17] 2025-06-03 09:30:49,905 | INFO     | sum of deviations: -54579008788.99999
[2025-06-03 13:13:17] 2025-06-03 09:30:49,905 | INFO     | mean x: 1748936429.0
[2025-06-03 13:13:17] 2025-06-03 09:30:49,905 | INFO     | mean y: 2518013.3145539905
[2025-06-03 13:13:17] 2025-06-03 09:30:49,905 | INFO     | -- intersect: 31858574028.906055
[2025-06-03 13:13:17] 2025-06-03 09:30:49,905 | INFO     | intersect: 31858574028.906055
[2025-06-03 13:13:17] 2025-06-03 09:30:49,906 | INFO     | chi2: 0.9924908319172703
[2025-06-03 13:13:17] 2025-06-03 09:30:49,906 | INFO     | current chi2=0.9924908319172703 (change=64.79579281679364 %)
[2025-06-03 13:13:17] 2025-06-03 09:30:49,906 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 13:13:17] 2025-06-03 09:30:49,908 | INFO     | sum of deviations: -52541396997.000015
[2025-06-03 13:13:17] 2025-06-03 09:30:49,908 | INFO     | mean x: 1748936581.5
[2025-06-03 13:13:17] 2025-06-03 09:30:49,908 | INFO     | mean y: 2516466.4615384615
[2025-06-03 13:13:17] 2025-06-03 09:30:49,909 | INFO     | -- intersect: 32934454312.26134
[2025-06-03 13:13:17] 2025-06-03 09:30:49,909 | INFO     | intersect: 32934454312.26134
[2025-06-03 13:13:17] 2025-06-03 09:30:49,909 | INFO     | chi2: 0.9781356834440724
[2025-06-03 13:13:17] 2025-06-03 09:30:49,909 | INFO     | current chi2=0.9781356834440724 (change=1.4463759272684582 %)
[2025-06-03 13:13:17] 2025-06-03 09:30:49,909 | INFO     | left removable region: 20
[2025-06-03 13:13:17] 2025-06-03 09:30:49,910 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 13:13:17] 2025-06-03 09:30:49,911 | INFO     | sum of deviations: -23862307814.0
[2025-06-03 13:13:17] 2025-06-03 09:30:49,911 | INFO     | mean x: 1748936551.0
[2025-06-03 13:13:17] 2025-06-03 09:30:49,911 | INFO     | mean y: 2517304.4866310162
[2025-06-03 13:13:17] 2025-06-03 09:30:49,912 | INFO     | -- intersect: 20584901178.432865
[2025-06-03 13:13:17] 2025-06-03 09:30:49,912 | INFO     | intersect: 20584901178.432865
[2025-06-03 13:13:17] 2025-06-03 09:30:49,912 | INFO     | chi2: 0.1505476366615328
[2025-06-03 13:13:17] 2025-06-03 09:30:49,912 | INFO     | -- intersect: 20584901178.432865
[2025-06-03 13:13:17] 2025-06-03 09:30:49,912 | INFO     | current memory leak: -11.77 B/s (using 187 data points, chi2=0.15)
[2025-06-03 13:13:17] 2025-06-03 09:30:49,913 | INFO     | ..............................
[2025-06-03 13:13:17] 2025-06-03 09:30:49,913 | INFO     | . Timing measurements:
[2025-06-03 13:13:17] 2025-06-03 09:30:49,913 | INFO     | . get job = 0 s
[2025-06-03 13:13:17] 2025-06-03 09:30:49,913 | INFO     | . initial setup = 2 s
[2025-06-03 13:13:17] 2025-06-03 09:30:49,913 | INFO     | . payload setup = 16 s
[2025-06-03 13:13:17] 2025-06-03 09:30:49,913 | INFO     | . stage-in = 0 s
[2025-06-03 13:13:17] 2025-06-03 09:30:49,914 | INFO     | . payload execution = 13310 s
[2025-06-03 13:13:17] 2025-06-03 09:30:49,914 | INFO     | . stage-out = 4 s
[2025-06-03 13:13:17] 2025-06-03 09:30:49,914 | INFO     | . log creation = 1 s
[2025-06-03 13:13:17] 2025-06-03 09:30:49,914 | INFO     | ..............................
[2025-06-03 13:13:17] 2025-06-03 09:30:50,042 | INFO     | 
[2025-06-03 13:13:17] 2025-06-03 09:30:50,042 | INFO     | job summary report
[2025-06-03 13:13:17] 2025-06-03 09:30:50,043 | INFO     | --------------------------------------------------
[2025-06-03 13:13:17] 2025-06-03 09:30:50,043 | INFO     | PanDA job id: 6677394622
[2025-06-03 13:13:17] 2025-06-03 09:30:50,043 | INFO     | task id: 45006595
[2025-06-03 13:13:17] 2025-06-03 09:30:50,043 | INFO     | errors: (none)
[2025-06-03 13:13:17] 2025-06-03 09:30:50,043 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:13:17] 2025-06-03 09:30:50,043 | INFO     | pilot state: finished 
[2025-06-03 13:13:17] 2025-06-03 09:30:50,043 | INFO     | transexitcode: 0
[2025-06-03 13:13:17] 2025-06-03 09:30:50,043 | INFO     | exeerrorcode: 0
[2025-06-03 13:13:17] 2025-06-03 09:30:50,043 | INFO     | exeerrordiag: 
[2025-06-03 13:13:17] 2025-06-03 09:30:50,043 | INFO     | exitcode: 0
[2025-06-03 13:13:17] 2025-06-03 09:30:50,043 | INFO     | exitmsg: OK
[2025-06-03 13:13:17] 2025-06-03 09:30:50,043 | INFO     | cpuconsumptiontime: 50490 s
[2025-06-03 13:13:17] 2025-06-03 09:30:50,044 | INFO     | nevents: 400
[2025-06-03 13:13:17] 2025-06-03 09:30:50,044 | INFO     | neventsw: 0
[2025-06-03 13:13:17] 2025-06-03 09:30:50,044 | INFO     | pid: 26795
[2025-06-03 13:13:17] 2025-06-03 09:30:50,044 | INFO     | pgrp: 26795
[2025-06-03 13:13:17] 2025-06-03 09:30:50,044 | INFO     | corecount: 8
[2025-06-03 13:13:17] 2025-06-03 09:30:50,044 | INFO     | event service: False
[2025-06-03 13:13:17] 2025-06-03 09:30:50,044 | INFO     | sizes: {0: 2405008, 1: 2405207, 12: 2405207, 14: 2405441, 23: 2405469, 13331: 2435166, 13336: 2444109, 13339: 2444165, 13436: 2444335}
[2025-06-03 13:13:17] 2025-06-03 09:30:50,044 | INFO     | --------------------------------------------------
[2025-06-03 13:13:17] 2025-06-03 09:30:50,044 | INFO     | 
[2025-06-03 13:13:17] 2025-06-03 09:30:50,044 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-06-03 13:13:17] 2025-06-03 09:30:50,435 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,435 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,435 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,435 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,435 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,436 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,436 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,436 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,436 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,436 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,436 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,436 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,436 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,437 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:13:17] 2025-06-03 09:30:50,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,437 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:13:17] 2025-06-03 09:30:50,437 | INFO     | job 6677394622 has completed (purged errors)
[2025-06-03 13:13:17] 2025-06-03 09:30:50,437 | INFO     | overall cleanup function is called
[2025-06-03 13:13:17] 2025-06-03 09:30:51,446 | INFO     | --- collectZombieJob: --- 10, [26795]
[2025-06-03 13:13:17] 2025-06-03 09:30:51,446 | INFO     | zombie collector waiting for pid 26795
[2025-06-03 13:13:17] 2025-06-03 09:30:51,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:13:17] 2025-06-03 09:30:51,447 | INFO     | collected zombie processes
[2025-06-03 13:13:17] 2025-06-03 09:30:51,447 | INFO     | will attempt to kill all subprocesses of pid=26795
[2025-06-03 13:13:17] 2025-06-03 09:30:51,550 | INFO     | process IDs to be killed: [26795] (in reverse order)
[2025-06-03 13:13:17] 2025-06-03 09:30:52,025 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:13:17] 2025-06-03 09:30:52,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:13:17] 2025-06-03 09:30:52,029 | INFO     | did not find any defunct processes belonging to 26795
[2025-06-03 13:13:17] 2025-06-03 09:30:52,033 | INFO     | did not find any defunct processes belonging to 26795
[2025-06-03 13:13:17] 2025-06-03 09:30:52,033 | INFO     | ready for new job
[2025-06-03 13:13:17] 2025-06-03 09:30:52,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:13:17] 2025-06-03 09:30:52,035 | INFO     | **************************************
[2025-06-03 13:13:17] 2025-06-03 09:30:52,036 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:13:17] 2025-06-03 09:30:52,036 | INFO     | **************************************
[2025-06-03 13:13:17] 2025-06-03 09:30:52,036 | INFO     | 
[2025-06-03 13:13:17] 2025-06-03 09:30:52,037 | INFO     | pilot is running in a VM
[2025-06-03 13:13:17] 2025-06-03 09:30:52,037 | INFO     | architecture information:
[2025-06-03 13:13:17] 2025-06-03 09:30:52,037 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:13:17] 2025-06-03 09:30:52,067 | INFO     | cat /etc/os-release:
[2025-06-03 13:13:17] NAME="CentOS Linux"
[2025-06-03 13:13:17] VERSION="7 (Core)"
[2025-06-03 13:13:17] ID="centos"
[2025-06-03 13:13:17] ID_LIKE="rhel fedora"
[2025-06-03 13:13:17] VERSION_ID="7"
[2025-06-03 13:13:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:13:17] ANSI_COLOR="0;31"
[2025-06-03 13:13:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:13:17] HOME_URL="https://www.centos.org/"
[2025-06-03 13:13:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:13:17] 
[2025-06-03 13:13:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:13:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:13:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:13:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:13:17] 
[2025-06-03 13:13:17] 2025-06-03 09:30:52,068 | INFO     | **************************************
[2025-06-03 13:13:17] 2025-06-03 09:30:52,571 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-06-03 13:13:17] 2025-06-03 09:30:52,671 | INFO     | sufficient remaining disk space (496795385856 B)
[2025-06-03 13:13:17] 2025-06-03 09:30:52,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:13:17] 2025-06-03 09:30:52,672 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:13:17] 2025-06-03 09:30:52,672 | INFO     | update_server=False
[2025-06-03 13:13:17] 2025-06-03 09:30:52,672 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:13:17] 2025-06-03 09:30:52,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:13:17] 2025-06-03 09:30:52,674 | INFO     | aborting loop
[2025-06-03 13:13:17] 2025-06-03 09:30:52,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:13:17] 2025-06-03 09:30:53,141 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:13:17] 2025-06-03 09:30:53,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:13:17] 2025-06-03 09:30:53,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:13:17] 2025-06-03 09:30:53,608 | INFO     | all data control threads have been joined
[2025-06-03 13:13:17] 2025-06-03 09:30:53,678 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:53,679 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:53,787 | INFO     | all job control threads have been joined
[2025-06-03 13:13:17] 2025-06-03 09:30:53,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:13:17] 2025-06-03 09:30:53,930 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:54,044 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:54,085 | INFO     | all payload control threads have been joined
[2025-06-03 13:13:17] 2025-06-03 09:30:54,447 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:54,613 | INFO     | [data] control thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:54,755 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:54,793 | INFO     | [job] control thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:54,799 | INFO     | [job] validate thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:54,857 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:54,871 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:54,996 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:55,055 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:13:17] 2025-06-03 09:30:55,091 | INFO     | [payload] control thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:55,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:56,061 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:57,857 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:13:17] 2025-06-03 09:30:58,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066902353728)>', '<ExcThread(monitor, started 140066466821888)>']
[2025-06-03 13:13:17] 2025-06-03 09:30:58,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:13:17] 2025-06-03 09:30:58,171 | INFO     | [monitor] control thread has ended
[2025-06-03 13:13:17] 2025-06-03 09:31:03,184 | INFO     | all workflow threads have been joined
[2025-06-03 13:13:17] 2025-06-03 09:31:03,184 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:13:17] 2025-06-03 09:31:03,185 | INFO     | traces error code: 0
[2025-06-03 13:13:17] 2025-06-03 09:31:03,185 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:13:17] 2025-06-03 09:31:03,582 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:13:17] 2025-06-03 09:31:03,694 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:13:17] 2025-06-03 09:31:03,811 [wrapper] pilotpid: 18230
[2025-06-03 13:13:17] 2025-06-03 09:31:03,950 [wrapper] Pilot exit status: 0
[2025-06-03 13:13:17] 2025-06-03 09:31:04,495 [wrapper] pandaids: 6677394622
[2025-06-03 13:13:17] 2025-06-03 09:31:05,356 [wrapper] cleanup supervisor_pilot 29722 18231
[2025-06-03 13:13:17] 2025-06-03 09:31:05,496 [wrapper] Test setup, not cleaning
[2025-06-03 13:13:17] 2025-06-03 09:31:05,604 [wrapper] apfmon messages muted
[2025-06-03 13:13:17] 2025-06-03 09:31:05,661 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:13:17] 2025-06-03 09:31:05,699 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:13:17]  *** Error codes and diagnostics ***
[2025-06-03 13:13:17]     "exeErrorCode": 0,
[2025-06-03 13:13:17]     "exeErrorDiag": "",
[2025-06-03 13:13:17]     "pilotErrorCode": 0,
[2025-06-03 13:13:17]     "pilotErrorDiag": "",
[2025-06-03 13:13:17]  *** Listing of results directory ***
[2025-06-03 13:13:17] total 393124
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:18 pilot3.tar.gz
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:26 queuedata.json
[2025-06-03 13:13:17] -rwx------. 1 boinc boinc     37140 Jun  2 21:27 runpilot2-wrapper.sh
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc       100 Jun  3 06:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:13:17] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 06:57 run_atlas
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc       105 Jun  3 06:57 job.xml
[2025-06-03 13:13:17] -rw-r--r--. 2 boinc boinc 213991289 Jun  3 06:57 EVNT.45006593._000376.pool.root.1
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc      6392 Jun  3 06:57 init_data.xml
[2025-06-03 13:13:17] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:57 start_atlas.sh
[2025-06-03 13:13:17] drwxrwx--x. 2 boinc boinc        68 Jun  3 06:57 shared
[2025-06-03 13:13:17] -rw-r--r--. 2 boinc boinc    508883 Jun  3 06:57 input.tar.gz
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc         0 Jun  3 06:57 boinc_lockfile
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc      2522 Jun  3 07:45 pandaJob.out
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc    988073 Jun  3 07:46 agis_schedconf.cvmfs.json
[2025-06-03 13:13:17] drwx------. 4 boinc boinc      4096 Jun  3 07:46 pilot3
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc 181662282 Jun  3 11:27 HITS.45006595._009384.pool.root.1
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc       531 Jun  3 11:28 boinc_task_state.xml
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc      1031 Jun  3 11:29 memory_monitor_summary.json
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc   1603667 Jun  3 11:29 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc    372883 Jun  3 11:29 log.45006595._009384.job.log.tgz.1
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc        95 Jun  3 11:29 pilot_heartbeat.json
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc      7683 Jun  3 11:30 heartbeat.json
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc      4417 Jun  3 11:31 pilotlog.txt
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc   1168366 Jun  3 11:31 log.45006595._009384.job.log.1
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc       357 Jun  3 11:31 output.list
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc       620 Jun  3 11:31 runtime_log
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc   1556480 Jun  3 11:31 result.tar.gz
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc       656 Jun  3 11:31 yYfNDm8zPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7KgKDmCPj0fn.diag
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc      8673 Jun  3 11:31 runtime_log.err
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc      8192 Jun  3 13:13 boinc_mmap_file
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc        28 Jun  3 13:13 wrapper_checkpoint.txt
[2025-06-03 13:13:17] -rw-r--r--. 1 boinc boinc     20507 Jun  3 13:13 stderr.txt
[2025-06-03 13:13:17] HITS file was successfully produced:
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc 181662282 Jun  3 11:27 shared/HITS.pool.root.1
[2025-06-03 13:13:17]  *** Contents of shared directory: ***
[2025-06-03 13:13:17] total 388420
[2025-06-03 13:13:17] -rw-r--r--. 2 boinc boinc 213991289 Jun  3 06:57 ATLAS.root_0
[2025-06-03 13:13:17] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:57 start_atlas.sh
[2025-06-03 13:13:17] -rw-r--r--. 2 boinc boinc    508883 Jun  3 06:57 input.tar.gz
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc 181662282 Jun  3 11:27 HITS.pool.root.1
[2025-06-03 13:13:17] -rw-------. 1 boinc boinc   1556480 Jun  3 11:31 result.tar.gz
13:13:19 (24822): run_atlas exited; CPU time 50659.270168
13:13:19 (24822): called boinc_finish(0)

</stderr_txt>
]]>

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