Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:12:00 (1289042): wrapper (7.7.26015): starting
01:12:00 (1289042): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 01:12:00] Arguments: --nthreads 4
[2025-06-05 01:12:00] Threads: 4
[2025-06-05 01:12:00] Checking for CVMFS
[2025-06-05 01:12:00] No cvmfs_config command found, will try listing directly
[2025-06-05 01:12:00] CVMFS is ok
[2025-06-05 01:12:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:12:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:12:00] Further information can be found at the LHC@home message board.
[2025-06-05 01:12:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:12:00] Checking for apptainer binary...
[2025-06-05 01:12:00] which: no apptainer in ((null))
[2025-06-05 01:12:00] apptainer is not installed, using version from CVMFS
[2025-06-05 01:12:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:12:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-05 01:12:00] apptainer works
[2025-06-05 01:12:00] Set ATHENA_PROC_NUMBER=4
[2025-06-05 01:12:00] Set ATHENA_CORE_NUMBER=4
[2025-06-05 01:12:00] Starting ATLAS job with PandaID=6677401022
[2025-06-05 01:12:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:03:03]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:03:03] 2025-06-05 02:02:27,647 | INFO     | total number of processed events: 400 (read)
[2025-06-05 04:03:03] 2025-06-05 02:02:27,652 | INFO     | executing command: lscpu
[2025-06-05 04:03:03] 2025-06-05 02:02:27,712 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 04:03:03] 2025-06-05 02:02:31,311 | WARNING  | process 1299731 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 04:03:03] 2025-06-05 02:02:31,311 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6677401022/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:03:03] 2025-06-05 02:02:31,666 | INFO     | number of running child processes to parent process 1299731: 1
[2025-06-05 04:03:03] 2025-06-05 02:02:31,667 | INFO     | maximum number of monitored processes: 6
[2025-06-05 04:03:03] 2025-06-05 02:02:32,036 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 04:03:03] 2025-06-05 02:02:32,037 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6677401022/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:03:03] 2025-06-05 02:02:32,037 | INFO     | extracted standard info from prmon json
[2025-06-05 04:03:03] 2025-06-05 02:02:32,038 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:03:03] 2025-06-05 02:02:32,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:03:03] 2025-06-05 02:02:32,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:03:03] 2025-06-05 02:02:32,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:03:03] 2025-06-05 02:02:32,041 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:03:03] 2025-06-05 02:02:32,042 | INFO     | sum of square deviations: 1444149868.0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,043 | INFO     | sum of deviations: 16404254139.0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,043 | INFO     | mean x: 1749083822.0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,043 | INFO     | mean y: 2317618.167664671
[2025-06-05 04:03:03] 2025-06-05 02:02:32,043 | INFO     | -- intersect: -19865714199.22086
[2025-06-05 04:03:03] 2025-06-05 02:02:32,043 | INFO     | intersect: -19865714199.22086
[2025-06-05 04:03:03] 2025-06-05 02:02:32,043 | INFO     | chi2: 1.8400831468435117
[2025-06-05 04:03:03] 2025-06-05 02:02:32,044 | INFO     | sum of square deviations: 1318277740.5
[2025-06-05 04:03:03] 2025-06-05 02:02:32,044 | INFO     | sum of deviations: 15982219508.499998
[2025-06-05 04:03:03] 2025-06-05 02:02:32,045 | INFO     | mean x: 1749083669.5
[2025-06-05 04:03:03] 2025-06-05 02:02:32,045 | INFO     | mean y: 2317106.722222222
[2025-06-05 04:03:03] 2025-06-05 02:02:32,045 | INFO     | -- intersect: -21202804003.855812
[2025-06-05 04:03:03] 2025-06-05 02:02:32,045 | INFO     | intersect: -21202804003.855812
[2025-06-05 04:03:03] 2025-06-05 02:02:32,045 | INFO     | chi2: 1.8421481421207138
[2025-06-05 04:03:03] 2025-06-05 02:02:32,045 | INFO     | current chi2=1.8421481421207138 (change=-0.11222293300954125 %)
[2025-06-05 04:03:03] 2025-06-05 02:02:32,045 | INFO     | right removable region: 161
[2025-06-05 04:03:03] 2025-06-05 02:02:32,046 | INFO     | sum of square deviations: 1318277740.5
[2025-06-05 04:03:03] 2025-06-05 02:02:32,047 | INFO     | sum of deviations: -13189827998.499998
[2025-06-05 04:03:03] 2025-06-05 02:02:32,047 | INFO     | mean x: 1749083974.5
[2025-06-05 04:03:03] 2025-06-05 02:02:32,047 | INFO     | mean y: 2353125.0802469137
[2025-06-05 04:03:03] 2025-06-05 02:02:32,047 | INFO     | -- intersect: 17502547560.463535
[2025-06-05 04:03:03] 2025-06-05 02:02:32,047 | INFO     | intersect: 17502547560.463535
[2025-06-05 04:03:03] 2025-06-05 02:02:32,047 | INFO     | chi2: 0.03292250362768635
[2025-06-05 04:03:03] 2025-06-05 02:02:32,047 | INFO     | current chi2=0.03292250362768635 (change=98.2108143491145 %)
[2025-06-05 04:03:03] 2025-06-05 02:02:32,048 | INFO     | sum of square deviations: 1199940638.0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,048 | INFO     | sum of deviations: -13283126735.999998
[2025-06-05 04:03:03] 2025-06-05 02:02:32,049 | INFO     | mean x: 1749084127.0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,049 | INFO     | mean y: 2353208.6369426753
[2025-06-05 04:03:03] 2025-06-05 02:02:32,049 | INFO     | -- intersect: 19364399459.18398
[2025-06-05 04:03:03] 2025-06-05 02:02:32,049 | INFO     | intersect: 19364399459.18398
[2025-06-05 04:03:03] 2025-06-05 02:02:32,049 | INFO     | chi2: 0.025745597800699044
[2025-06-05 04:03:03] 2025-06-05 02:02:32,049 | INFO     | current chi2=0.025745597800699044 (change=21.79939262259463 %)
[2025-06-05 04:03:03] 2025-06-05 02:02:32,049 | INFO     | left removable region: 20
[2025-06-05 04:03:03] 2025-06-05 02:02:32,050 | INFO     | sum of square deviations: 869188390.0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,050 | INFO     | sum of deviations: -8808576961.0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,050 | INFO     | mean x: 1749084249.0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,051 | INFO     | mean y: 2347908.418439716
[2025-06-05 04:03:03] 2025-06-05 02:02:32,051 | INFO     | -- intersect: 17728014053.808838
[2025-06-05 04:03:03] 2025-06-05 02:02:32,051 | INFO     | intersect: 17728014053.808838
[2025-06-05 04:03:03] 2025-06-05 02:02:32,051 | INFO     | chi2: 0.021673262579859746
[2025-06-05 04:03:03] 2025-06-05 02:02:32,051 | INFO     | -- intersect: 17728014053.808838
[2025-06-05 04:03:03] 2025-06-05 02:02:32,051 | INFO     | current memory leak: -10.13 B/s (using 141 data points, chi2=0.02)
[2025-06-05 04:03:03] 2025-06-05 02:02:32,052 | INFO     | ..............................
[2025-06-05 04:03:03] 2025-06-05 02:02:32,052 | INFO     | . Timing measurements:
[2025-06-05 04:03:03] 2025-06-05 02:02:32,052 | INFO     | . get job = 0 s
[2025-06-05 04:03:03] 2025-06-05 02:02:32,052 | INFO     | . initial setup = 1 s
[2025-06-05 04:03:03] 2025-06-05 02:02:32,052 | INFO     | . payload setup = 7 s
[2025-06-05 04:03:03] 2025-06-05 02:02:32,052 | INFO     | . stage-in = 0 s
[2025-06-05 04:03:03] 2025-06-05 02:02:32,052 | INFO     | . payload execution = 10187 s
[2025-06-05 04:03:03] 2025-06-05 02:02:32,052 | INFO     | . stage-out = 0 s
[2025-06-05 04:03:03] 2025-06-05 02:02:32,052 | INFO     | . log creation = 0 s
[2025-06-05 04:03:03] 2025-06-05 02:02:32,053 | INFO     | ..............................
[2025-06-05 04:03:03] 2025-06-05 02:02:32,166 | INFO     | 
[2025-06-05 04:03:03] 2025-06-05 02:02:32,167 | INFO     | job summary report
[2025-06-05 04:03:03] 2025-06-05 02:02:32,167 | INFO     | --------------------------------------------------
[2025-06-05 04:03:03] 2025-06-05 02:02:32,167 | INFO     | PanDA job id: 6677401022
[2025-06-05 04:03:03] 2025-06-05 02:02:32,167 | INFO     | task id: 45006595
[2025-06-05 04:03:03] 2025-06-05 02:02:32,167 | INFO     | errors: (none)
[2025-06-05 04:03:03] 2025-06-05 02:02:32,167 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:03:03] 2025-06-05 02:02:32,167 | INFO     | pilot state: finished 
[2025-06-05 04:03:03] 2025-06-05 02:02:32,167 | INFO     | transexitcode: 0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,167 | INFO     | exeerrorcode: 0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,167 | INFO     | exeerrordiag: 
[2025-06-05 04:03:03] 2025-06-05 02:02:32,167 | INFO     | exitcode: 0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,167 | INFO     | exitmsg: OK
[2025-06-05 04:03:03] 2025-06-05 02:02:32,168 | INFO     | cpuconsumptiontime: 38482 s
[2025-06-05 04:03:03] 2025-06-05 02:02:32,168 | INFO     | nevents: 400
[2025-06-05 04:03:03] 2025-06-05 02:02:32,168 | INFO     | neventsw: 0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,168 | INFO     | pid: 1299731
[2025-06-05 04:03:03] 2025-06-05 02:02:32,168 | INFO     | pgrp: 1299731
[2025-06-05 04:03:03] 2025-06-05 02:02:32,168 | INFO     | corecount: 4
[2025-06-05 04:03:03] 2025-06-05 02:02:32,168 | INFO     | event service: False
[2025-06-05 04:03:03] 2025-06-05 02:02:32,168 | INFO     | sizes: {0: 2396512, 1: 2397379, 6: 2397585, 12: 2397613, 10199: 2425985, 10200: 2435132, 10205: 2435246}
[2025-06-05 04:03:03] 2025-06-05 02:02:32,168 | INFO     | --------------------------------------------------
[2025-06-05 04:03:03] 2025-06-05 02:02:32,168 | INFO     | 
[2025-06-05 04:03:03] 2025-06-05 02:02:32,168 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-05 04:03:03] 2025-06-05 02:02:32,190 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,191 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,191 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,191 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,191 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,191 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,191 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,192 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,192 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,192 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,192 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:03:03] 2025-06-05 02:02:32,192 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,192 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:03:03] 2025-06-05 02:02:32,193 | INFO     | job 6677401022 has completed (purged errors)
[2025-06-05 04:03:03] 2025-06-05 02:02:32,193 | INFO     | overall cleanup function is called
[2025-06-05 04:03:03] 2025-06-05 02:02:33,198 | INFO     | --- collectZombieJob: --- 10, [1299731]
[2025-06-05 04:03:03] 2025-06-05 02:02:33,198 | INFO     | zombie collector waiting for pid 1299731
[2025-06-05 04:03:03] 2025-06-05 02:02:33,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:03:03] 2025-06-05 02:02:33,199 | INFO     | collected zombie processes
[2025-06-05 04:03:03] 2025-06-05 02:02:33,199 | INFO     | will attempt to kill all subprocesses of pid=1299731
[2025-06-05 04:03:03] 2025-06-05 02:02:33,547 | INFO     | process IDs to be killed: [1299731] (in reverse order)
[2025-06-05 04:03:03] 2025-06-05 02:02:33,658 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:03:03] 2025-06-05 02:02:33,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:03:03] 2025-06-05 02:02:33,670 | INFO     | did not find any defunct processes belonging to 1299731
[2025-06-05 04:03:03] 2025-06-05 02:02:33,682 | INFO     | did not find any defunct processes belonging to 1299731
[2025-06-05 04:03:03] 2025-06-05 02:02:33,682 | INFO     | ready for new job
[2025-06-05 04:03:03] 2025-06-05 02:02:33,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:03:03] 2025-06-05 02:02:33,685 | INFO     | **************************************
[2025-06-05 04:03:03] 2025-06-05 02:02:33,685 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:03:03] 2025-06-05 02:02:33,685 | INFO     | **************************************
[2025-06-05 04:03:03] 2025-06-05 02:02:33,685 | INFO     | 
[2025-06-05 04:03:03] 2025-06-05 02:02:33,689 | INFO     | architecture information:
[2025-06-05 04:03:03] 2025-06-05 02:02:33,690 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:03:03] 2025-06-05 02:02:33,704 | INFO     | cat /etc/os-release:
[2025-06-05 04:03:03] NAME="CentOS Linux"
[2025-06-05 04:03:03] VERSION="7 (Core)"
[2025-06-05 04:03:03] ID="centos"
[2025-06-05 04:03:03] ID_LIKE="rhel fedora"
[2025-06-05 04:03:03] VERSION_ID="7"
[2025-06-05 04:03:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:03:03] ANSI_COLOR="0;31"
[2025-06-05 04:03:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:03:03] HOME_URL="https://www.centos.org/"
[2025-06-05 04:03:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:03:03] 
[2025-06-05 04:03:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:03:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:03:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:03:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:03:03] 
[2025-06-05 04:03:03] 2025-06-05 02:02:33,705 | INFO     | **************************************
[2025-06-05 04:03:03] 2025-06-05 02:02:34,207 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-05 04:03:03] 2025-06-05 02:02:34,223 | INFO     | sufficient remaining disk space (663116316672 B)
[2025-06-05 04:03:03] 2025-06-05 02:02:34,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:03:03] 2025-06-05 02:02:34,223 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:03:03] 2025-06-05 02:02:34,223 | INFO     | update_server=False
[2025-06-05 04:03:03] 2025-06-05 02:02:34,224 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:03:03] 2025-06-05 02:02:34,224 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 04:03:03] 2025-06-05 02:02:34,224 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:03:03] 2025-06-05 02:02:34,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:03:03] 2025-06-05 02:02:34,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:03:03] 2025-06-05 02:02:34,276 | INFO     | all payload control threads have been joined
[2025-06-05 04:03:03] 2025-06-05 02:02:34,600 | INFO     | all job control threads have been joined
[2025-06-05 04:03:03] 2025-06-05 02:02:34,641 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:03:03] 2025-06-05 02:02:35,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:03:03] 2025-06-05 02:02:35,174 | INFO     | aborting loop
[2025-06-05 04:03:03] 2025-06-05 02:02:35,178 | INFO     | all data control threads have been joined
[2025-06-05 04:03:03] 2025-06-05 02:02:35,229 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:35,280 | INFO     | [payload] control thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:35,368 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:35,543 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:35,606 | INFO     | [job] control thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:35,615 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:35,625 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:36,062 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:36,179 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:36,184 | INFO     | [data] control thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:36,342 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:36,376 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:36,647 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:36,692 | INFO     | [job] validate thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:37,176 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:03:03] 2025-06-05 02:02:37,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:03:03] 2025-06-05 02:02:38,181 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:41,234 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:03:03] 2025-06-05 02:02:43,320 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22359356942144)>', '<ExcThread(monitor, started 22359043958528)>']
[2025-06-05 04:03:03] 2025-06-05 02:02:44,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:03:03] 2025-06-05 02:02:44,267 | INFO     | [monitor] control thread has ended
[2025-06-05 04:03:03] 2025-06-05 02:02:48,345 | INFO     | all workflow threads have been joined
[2025-06-05 04:03:03] 2025-06-05 02:02:48,345 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:03:03] 2025-06-05 02:02:48,346 | INFO     | traces error code: 0
[2025-06-05 04:03:03] 2025-06-05 02:02:48,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:03:03] 2025-06-05 02:02:48,539 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:03:03] 2025-06-05 02:02:48,543 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:03:03] 2025-06-05 02:02:48,545 [wrapper] pilotpid: 1292763
[2025-06-05 04:03:03] 2025-06-05 02:02:48,548 [wrapper] Pilot exit status: 0
[2025-06-05 04:03:03] 2025-06-05 02:02:48,587 [wrapper] pandaids: 6677401022
[2025-06-05 04:03:03] 2025-06-05 02:02:48,660 [wrapper] cleanup supervisor_pilot 1598255 1292764
[2025-06-05 04:03:03] 2025-06-05 02:02:48,664 [wrapper] Test setup, not cleaning
[2025-06-05 04:03:03] 2025-06-05 02:02:48,668 [wrapper] apfmon messages muted
[2025-06-05 04:03:03] 2025-06-05 02:02:48,671 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:03:03] 2025-06-05 02:02:48,674 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:03:03]  *** Error codes and diagnostics ***
[2025-06-05 04:03:03]     "exeErrorCode": 0,
[2025-06-05 04:03:03]     "exeErrorDiag": "",
[2025-06-05 04:03:03]     "pilotErrorCode": 0,
[2025-06-05 04:03:03]     "pilotErrorDiag": "",
[2025-06-05 04:03:03]  *** Listing of results directory ***
[2025-06-05 04:03:03] total 393308
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc    495897 Jun  2 22:47 pilot3.tar.gz
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc      5111 Jun  2 23:04 queuedata.json
[2025-06-05 04:03:03] -rwx------ 1 boinc boinc     37140 Jun  2 23:08 runpilot2-wrapper.sh
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc       100 Jun  5 01:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:03:03] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 01:11 run_atlas
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc       105 Jun  5 01:11 job.xml
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc      6636 Jun  5 01:12 init_data.xml
[2025-06-05 04:03:03] -rw-r--r-- 2 boinc boinc 216245244 Jun  5 01:12 EVNT.45006593._000478.pool.root.1
[2025-06-05 04:03:03] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:12 start_atlas.sh
[2025-06-05 04:03:03] drwxrwx--x 2 boinc boinc      4096 Jun  5 01:12 shared
[2025-06-05 04:03:03] -rw-r--r-- 2 boinc boinc    508878 Jun  5 01:12 input.tar.gz
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc         0 Jun  5 01:12 boinc_lockfile
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc      2524 Jun  5 01:12 pandaJob.out
[2025-06-05 04:03:03] -rw------- 1 boinc boinc    987032 Jun  5 01:12 agis_schedconf.cvmfs.json
[2025-06-05 04:03:03] -rw------- 1 boinc boinc   1598969 Jun  5 01:12 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:03:03] drwx------ 4 boinc boinc      4096 Jun  5 01:12 pilot3
[2025-06-05 04:03:03] -rw------- 1 boinc boinc 180147632 Jun  5 04:01 HITS.45006595._011939.pool.root.1
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc       528 Jun  5 04:01 boinc_task_state.xml
[2025-06-05 04:03:03] -rw------- 1 boinc boinc        95 Jun  5 04:02 pilot_heartbeat.json
[2025-06-05 04:03:03] -rw------- 1 boinc boinc      1035 Jun  5 04:02 memory_monitor_summary.json
[2025-06-05 04:03:03] -rw------- 1 boinc boinc    298151 Jun  5 04:02 log.45006595._011939.job.log.tgz.1
[2025-06-05 04:03:03] -rw------- 1 boinc boinc      7725 Jun  5 04:02 heartbeat.json
[2025-06-05 04:03:03] -rw------- 1 boinc boinc      4486 Jun  5 04:02 pilotlog.txt
[2025-06-05 04:03:03] -rw------- 1 boinc boinc    961986 Jun  5 04:02 log.45006595._011939.job.log.1
[2025-06-05 04:03:03] -rw------- 1 boinc boinc       357 Jun  5 04:02 output.list
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc       620 Jun  5 04:02 runtime_log
[2025-06-05 04:03:03] -rw------- 1 boinc boinc   1280000 Jun  5 04:02 result.tar.gz
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc      9026 Jun  5 04:02 runtime_log.err
[2025-06-05 04:03:03] -rw------- 1 boinc boinc       664 Jun  5 04:02 cXEODmKZRg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoigKDmiPJPdm.diag
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc        26 Jun  5 04:02 wrapper_checkpoint.txt
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc      8192 Jun  5 04:03 boinc_mmap_file
[2025-06-05 04:03:03] -rw-r--r-- 1 boinc boinc     20944 Jun  5 04:03 stderr.txt
[2025-06-05 04:03:03] HITS file was successfully produced:
[2025-06-05 04:03:03] -rw------- 1 boinc boinc 180147632 Jun  5 04:01 shared/HITS.pool.root.1
[2025-06-05 04:03:03]  *** Contents of shared directory: ***
[2025-06-05 04:03:03] total 388884
[2025-06-05 04:03:03] -rw-r--r-- 2 boinc boinc 216245244 Jun  5 01:12 ATLAS.root_0
[2025-06-05 04:03:03] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:12 start_atlas.sh
[2025-06-05 04:03:03] -rw-r--r-- 2 boinc boinc    508878 Jun  5 01:12 input.tar.gz
[2025-06-05 04:03:03] -rw------- 1 boinc boinc 180147632 Jun  5 04:01 HITS.pool.root.1
[2025-06-05 04:03:03] -rw------- 1 boinc boinc   1280000 Jun  5 04:02 result.tar.gz
04:03:05 (1289042): run_atlas exited; CPU time 38838.951234
04:03:05 (1289042): called boinc_finish(0)

</stderr_txt>
]]>

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