Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:35:13 (1271644): wrapper (7.7.26015): starting
22:35:13 (1271644): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 22:35:13] Arguments: --nthreads 4
[2025-06-03 22:35:13] Threads: 4
[2025-06-03 22:35:13] Checking for CVMFS
[2025-06-03 22:35:13] No cvmfs_config command found, will try listing directly
[2025-06-03 22:35:13] CVMFS is ok
[2025-06-03 22:35:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 22:35:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 22:35:13] Further information can be found at the LHC@home message board.
[2025-06-03 22:35:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:35:13] Checking for apptainer binary...
[2025-06-03 22:35:13] which: no apptainer in ((null))
[2025-06-03 22:35:13] apptainer is not installed, using version from CVMFS
[2025-06-03 22:35:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:35:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2025-06-03 22:35:13] apptainer works
[2025-06-03 22:35:13] Set ATHENA_PROC_NUMBER=4
[2025-06-03 22:35:13] Set ATHENA_CORE_NUMBER=4
[2025-06-03 22:35:13] Starting ATLAS job with PandaID=6677386424
[2025-06-03 22:35:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:39:26]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:39:26] 2025-06-03 23:35:35,529 | INFO     | PID=1275204 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 01:39:26] 2025-06-03 23:35:35,529 | INFO     | .. there are 4 such processes running
[2025-06-04 01:39:26] 2025-06-03 23:35:36,011 | INFO     | monitor loop #799: job 0:6677386424 is in state 'finished'
[2025-06-04 01:39:26] 2025-06-03 23:35:36,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:39:26] 2025-06-03 23:35:38,514 | INFO     | monitor loop #800: job 0:6677386424 is in state 'finished'
[2025-06-04 01:39:26] 2025-06-03 23:35:38,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:39:26] 2025-06-03 23:35:40,048 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 01:39:26] 2025-06-03 23:35:40,049 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6677386424/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:39:26] 2025-06-03 23:35:40,050 | INFO     | extracted standard info from prmon json
[2025-06-04 01:39:26] 2025-06-03 23:35:40,050 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:39:26] 2025-06-03 23:35:40,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:39:26] 2025-06-03 23:35:40,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:39:26] 2025-06-03 23:35:40,050 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:39:26] 2025-06-03 23:35:40,054 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:39:26] 2025-06-03 23:35:40,055 | INFO     | sum of square deviations: 1719429448.0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,056 | INFO     | sum of deviations: -59008907601.000015
[2025-06-04 01:39:26] 2025-06-03 23:35:40,056 | INFO     | mean x: 1748988316.0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,056 | INFO     | mean y: 2482567.8757062145
[2025-06-04 01:39:26] 2025-06-03 23:35:40,057 | INFO     | -- intersect: 60025817665.526436
[2025-06-04 01:39:26] 2025-06-03 23:35:40,057 | INFO     | intersect: 60025817665.526436
[2025-06-04 01:39:26] 2025-06-03 23:35:40,057 | INFO     | chi2: 1.9866116025822336
[2025-06-04 01:39:26] 2025-06-03 23:35:40,057 | INFO     | sum of square deviations: 1577789583.0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,059 | INFO     | sum of deviations: -55122321576.0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,059 | INFO     | mean x: 1748988163.5
[2025-06-04 01:39:26] 2025-06-03 23:35:40,059 | INFO     | mean y: 2486753.5
[2025-06-04 01:39:26] 2025-06-03 23:35:40,059 | INFO     | -- intersect: 61105874061.809204
[2025-06-04 01:39:26] 2025-06-03 23:35:40,059 | INFO     | intersect: 61105874061.809204
[2025-06-04 01:39:26] 2025-06-03 23:35:40,059 | INFO     | chi2: 1.9824202812673393
[2025-06-04 01:39:26] 2025-06-03 23:35:40,060 | INFO     | current chi2=1.9824202812673393 (change=0.2109783970579024 %)
[2025-06-04 01:39:26] 2025-06-03 23:35:40,060 | INFO     | right removable region: 171
[2025-06-04 01:39:26] 2025-06-03 23:35:40,060 | INFO     | sum of square deviations: 1577789583.0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,061 | INFO     | sum of deviations: -87293537996.5
[2025-06-04 01:39:26] 2025-06-03 23:35:40,061 | INFO     | mean x: 1748988468.5
[2025-06-04 01:39:26] 2025-06-03 23:35:40,061 | INFO     | mean y: 2512662.0290697673
[2025-06-04 01:39:26] 2025-06-03 23:35:40,061 | INFO     | -- intersect: 96767881742.58098
[2025-06-04 01:39:26] 2025-06-03 23:35:40,062 | INFO     | intersect: 96767881742.58098
[2025-06-04 01:39:26] 2025-06-03 23:35:40,062 | INFO     | chi2: 0.3237610685750338
[2025-06-04 01:39:26] 2025-06-03 23:35:40,062 | INFO     | current chi2=0.3237610685750338 (change=83.70285021218021 %)
[2025-06-04 01:39:26] 2025-06-03 23:35:40,062 | INFO     | sum of square deviations: 1444149868.0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,063 | INFO     | sum of deviations: -83394931525.0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,064 | INFO     | mean x: 1748988621.0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,064 | INFO     | mean y: 2508188.880239521
[2025-06-04 01:39:26] 2025-06-03 23:35:40,064 | INFO     | -- intersect: 101000880669.63663
[2025-06-04 01:39:26] 2025-06-03 23:35:40,064 | INFO     | intersect: 101000880669.63663
[2025-06-04 01:39:26] 2025-06-03 23:35:40,064 | INFO     | chi2: 0.3092095680793252
[2025-06-04 01:39:26] 2025-06-03 23:35:40,065 | INFO     | current chi2=0.3092095680793252 (change=4.494518306278747 %)
[2025-06-04 01:39:26] 2025-06-03 23:35:40,065 | INFO     | left removable region: 20
[2025-06-04 01:39:26] 2025-06-03 23:35:40,065 | INFO     | sum of square deviations: 1067554900.0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,066 | INFO     | sum of deviations: -68033060636.0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,066 | INFO     | mean x: 1748988743.0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,066 | INFO     | mean y: 2500765.642384106
[2025-06-04 01:39:26] 2025-06-03 23:35:40,066 | INFO     | -- intersect: 111461927540.04099
[2025-06-04 01:39:26] 2025-06-03 23:35:40,066 | INFO     | intersect: 111461927540.04099
[2025-06-04 01:39:26] 2025-06-03 23:35:40,067 | INFO     | chi2: 0.28579476516966373
[2025-06-04 01:39:26] 2025-06-03 23:35:40,067 | INFO     | -- intersect: 111461927540.04099
[2025-06-04 01:39:26] 2025-06-03 23:35:40,067 | INFO     | current memory leak: -63.73 B/s (using 151 data points, chi2=0.29)
[2025-06-04 01:39:26] 2025-06-03 23:35:40,068 | INFO     | ..............................
[2025-06-04 01:39:26] 2025-06-03 23:35:40,068 | INFO     | . Timing measurements:
[2025-06-04 01:39:26] 2025-06-03 23:35:40,068 | INFO     | . get job = 0 s
[2025-06-04 01:39:26] 2025-06-03 23:35:40,068 | INFO     | . initial setup = 1 s
[2025-06-04 01:39:26] 2025-06-03 23:35:40,068 | INFO     | . payload setup = 6 s
[2025-06-04 01:39:26] 2025-06-03 23:35:40,069 | INFO     | . stage-in = 0 s
[2025-06-04 01:39:26] 2025-06-03 23:35:40,069 | INFO     | . payload execution = 10786 s
[2025-06-04 01:39:26] 2025-06-03 23:35:40,069 | INFO     | . stage-out = 1 s
[2025-06-04 01:39:26] 2025-06-03 23:35:40,069 | INFO     | . log creation = 0 s
[2025-06-04 01:39:26] 2025-06-03 23:35:40,069 | INFO     | ..............................
[2025-06-04 01:39:26] 2025-06-03 23:35:40,184 | INFO     | 
[2025-06-04 01:39:26] 2025-06-03 23:35:40,185 | INFO     | job summary report
[2025-06-04 01:39:26] 2025-06-03 23:35:40,185 | INFO     | --------------------------------------------------
[2025-06-04 01:39:26] 2025-06-03 23:35:40,185 | INFO     | PanDA job id: 6677386424
[2025-06-04 01:39:26] 2025-06-03 23:35:40,185 | INFO     | task id: 45006595
[2025-06-04 01:39:26] 2025-06-03 23:35:40,185 | INFO     | errors: (none)
[2025-06-04 01:39:26] 2025-06-03 23:35:40,185 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:39:26] 2025-06-03 23:35:40,185 | INFO     | pilot state: finished 
[2025-06-04 01:39:26] 2025-06-03 23:35:40,186 | INFO     | transexitcode: 0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,186 | INFO     | exeerrorcode: 0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,186 | INFO     | exeerrordiag: 
[2025-06-04 01:39:26] 2025-06-03 23:35:40,186 | INFO     | exitcode: 0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,186 | INFO     | exitmsg: OK
[2025-06-04 01:39:26] 2025-06-03 23:35:40,186 | INFO     | cpuconsumptiontime: 41526 s
[2025-06-04 01:39:26] 2025-06-03 23:35:40,186 | INFO     | nevents: 400
[2025-06-04 01:39:26] 2025-06-03 23:35:40,186 | INFO     | neventsw: 0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,186 | INFO     | pid: 1281918
[2025-06-04 01:39:26] 2025-06-03 23:35:40,186 | INFO     | pgrp: 1281918
[2025-06-04 01:39:26] 2025-06-03 23:35:40,186 | INFO     | corecount: 4
[2025-06-04 01:39:26] 2025-06-03 23:35:40,187 | INFO     | event service: False
[2025-06-04 01:39:26] 2025-06-03 23:35:40,187 | INFO     | sizes: {0: 2404349, 1: 2405216, 5: 2405422, 12: 2405478, 10796: 2434401, 10797: 2443364, 10798: 2443548, 10803: 2443718}
[2025-06-04 01:39:26] 2025-06-03 23:35:40,187 | INFO     | --------------------------------------------------
[2025-06-04 01:39:26] 2025-06-03 23:35:40,187 | INFO     | 
[2025-06-04 01:39:26] 2025-06-03 23:35:40,187 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-06-04 01:39:26] 2025-06-03 23:35:40,205 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,206 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,206 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,206 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,207 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,207 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,207 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:39:26] 2025-06-03 23:35:40,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,208 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:39:26] 2025-06-03 23:35:40,208 | INFO     | job 6677386424 has completed (purged errors)
[2025-06-04 01:39:26] 2025-06-03 23:35:40,208 | INFO     | overall cleanup function is called
[2025-06-04 01:39:26] 2025-06-03 23:35:41,216 | INFO     | --- collectZombieJob: --- 10, [1281918]
[2025-06-04 01:39:26] 2025-06-03 23:35:41,216 | INFO     | zombie collector waiting for pid 1281918
[2025-06-04 01:39:26] 2025-06-03 23:35:41,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:39:26] 2025-06-03 23:35:41,216 | INFO     | collected zombie processes
[2025-06-04 01:39:26] 2025-06-03 23:35:41,216 | INFO     | will attempt to kill all subprocesses of pid=1281918
[2025-06-04 01:39:26] 2025-06-03 23:35:41,478 | INFO     | process IDs to be killed: [1281918] (in reverse order)
[2025-06-04 01:39:26] 2025-06-03 23:35:41,542 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:39:26] 2025-06-03 23:35:41,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:39:26] 2025-06-03 23:35:41,550 | INFO     | did not find any defunct processes belonging to 1281918
[2025-06-04 01:39:26] 2025-06-03 23:35:41,557 | INFO     | did not find any defunct processes belonging to 1281918
[2025-06-04 01:39:26] 2025-06-03 23:35:41,558 | INFO     | ready for new job
[2025-06-04 01:39:26] 2025-06-03 23:35:41,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:39:26] 2025-06-03 23:35:41,559 | INFO     | **************************************
[2025-06-04 01:39:26] 2025-06-03 23:35:41,560 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:39:26] 2025-06-03 23:35:41,560 | INFO     | **************************************
[2025-06-04 01:39:26] 2025-06-03 23:35:41,560 | INFO     | 
[2025-06-04 01:39:26] 2025-06-03 23:35:41,562 | INFO     | architecture information:
[2025-06-04 01:39:26] 2025-06-03 23:35:41,562 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:39:26] 2025-06-03 23:35:41,574 | INFO     | cat /etc/os-release:
[2025-06-04 01:39:26] NAME="CentOS Linux"
[2025-06-04 01:39:26] VERSION="7 (Core)"
[2025-06-04 01:39:26] ID="centos"
[2025-06-04 01:39:26] ID_LIKE="rhel fedora"
[2025-06-04 01:39:26] VERSION_ID="7"
[2025-06-04 01:39:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:39:26] ANSI_COLOR="0;31"
[2025-06-04 01:39:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:39:26] HOME_URL="https://www.centos.org/"
[2025-06-04 01:39:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:39:26] 
[2025-06-04 01:39:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:39:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:39:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:39:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:39:26] 
[2025-06-04 01:39:26] 2025-06-03 23:35:41,574 | INFO     | **************************************
[2025-06-04 01:39:26] 2025-06-03 23:35:42,077 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-06-04 01:39:26] 2025-06-03 23:35:42,090 | INFO     | sufficient remaining disk space (3457562968064 B)
[2025-06-04 01:39:26] 2025-06-03 23:35:42,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:39:26] 2025-06-03 23:35:42,090 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:39:26] 2025-06-03 23:35:42,090 | INFO     | update_server=False
[2025-06-04 01:39:26] 2025-06-03 23:35:42,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:39:26] 2025-06-03 23:35:42,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:39:26] 2025-06-03 23:35:42,091 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 01:39:26] 2025-06-03 23:35:42,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:39:26] 2025-06-03 23:35:42,092 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:39:26] 2025-06-03 23:35:42,092 | INFO     | aborting loop
[2025-06-04 01:39:26] 2025-06-03 23:35:42,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:39:26] 2025-06-03 23:35:42,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:39:26] 2025-06-03 23:35:42,224 | INFO     | all payload control threads have been joined
[2025-06-04 01:39:26] 2025-06-03 23:35:42,439 | INFO     | all data control threads have been joined
[2025-06-04 01:39:26] 2025-06-03 23:35:42,626 | INFO     | all job control threads have been joined
[2025-06-04 01:39:26] 2025-06-03 23:35:42,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:39:26] 2025-06-03 23:35:43,095 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:43,095 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:43,095 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:43,230 | INFO     | [payload] control thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:43,321 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:43,414 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:43,445 | INFO     | [data] control thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:43,631 | INFO     | [job] control thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:43,726 | INFO     | [job] validate thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:43,837 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:44,037 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:44,138 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:44,513 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:44,670 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:45,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:39:26] 2025-06-03 23:35:49,262 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:52,205 | INFO     | job.realtimelogging is not enabled
[2025-06-04 01:39:26] 2025-06-03 23:35:53,207 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:39:26] 2025-06-03 23:35:53,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22656055957312)>', '<ExcThread(monitor, started 22655470114560)>']
[2025-06-04 01:39:26] 2025-06-03 23:35:54,134 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:39:26] 2025-06-03 23:35:54,134 | INFO     | [monitor] control thread has ended
[2025-06-04 01:39:26] 2025-06-03 23:35:58,876 | INFO     | all workflow threads have been joined
[2025-06-04 01:39:26] 2025-06-03 23:35:58,877 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:39:26] 2025-06-03 23:35:58,877 | INFO     | traces error code: 0
[2025-06-04 01:39:26] 2025-06-03 23:35:58,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:39:26] 2025-06-03 23:35:58,989 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:39:26] 2025-06-03 23:35:58,991 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:39:26] 2025-06-03 23:35:58,993 [wrapper] pilotpid: 1275204
[2025-06-04 01:39:26] 2025-06-03 23:35:58,995 [wrapper] Pilot exit status: 0
[2025-06-04 01:39:26] 2025-06-03 23:35:59,004 [wrapper] pandaids: 6677386424
[2025-06-04 01:39:26] 2025-06-03 23:35:59,048 [wrapper] cleanup supervisor_pilot 1472235 1275205
[2025-06-04 01:39:26] 2025-06-03 23:35:59,051 [wrapper] Test setup, not cleaning
[2025-06-04 01:39:26] 2025-06-03 23:35:59,053 [wrapper] apfmon messages muted
[2025-06-04 01:39:26] 2025-06-03 23:35:59,055 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:39:26] 2025-06-03 23:35:59,057 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:39:26]  *** Error codes and diagnostics ***
[2025-06-04 01:39:26]     "exeErrorCode": 0,
[2025-06-04 01:39:26]     "exeErrorDiag": "",
[2025-06-04 01:39:26]     "pilotErrorCode": 0,
[2025-06-04 01:39:26]     "pilotErrorDiag": "",
[2025-06-04 01:39:26]  *** Listing of results directory ***
[2025-06-04 01:39:26] total 391528
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc    495897 Jun  2 19:07 pilot3.tar.gz
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc      5111 Jun  2 19:08 queuedata.json
[2025-06-04 01:39:26] -rwx------ 1 boinc boinc     37140 Jun  2 19:09 runpilot2-wrapper.sh
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc       100 Jun  3 22:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:39:26] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 22:35 run_atlas
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc       105 Jun  3 22:35 job.xml
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc      6417 Jun  3 22:35 init_data.xml
[2025-06-04 01:39:26] -rw-r--r-- 2 boinc boinc 217366387 Jun  3 22:35 EVNT.45006593._000200.pool.root.1
[2025-06-04 01:39:26] -rw-r--r-- 2 boinc boinc     15093 Jun  3 22:35 start_atlas.sh
[2025-06-04 01:39:26] drwxrwx--x 2 boinc boinc      4096 Jun  3 22:35 shared
[2025-06-04 01:39:26] -rw-r--r-- 2 boinc boinc    508877 Jun  3 22:35 input.tar.gz
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc         0 Jun  3 22:35 boinc_lockfile
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc      2521 Jun  3 22:35 pandaJob.out
[2025-06-04 01:39:26] -rw------- 1 boinc boinc    986853 Jun  3 22:35 agis_schedconf.cvmfs.json
[2025-06-04 01:39:26] drwx------ 4 boinc boinc      4096 Jun  3 22:35 pilot3
[2025-06-04 01:39:26] -rw------- 1 boinc boinc 177083237 Jun  4 01:34 HITS.45006595._004981.pool.root.1
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc       528 Jun  4 01:35 boinc_task_state.xml
[2025-06-04 01:39:26] -rw------- 1 boinc boinc        95 Jun  4 01:35 pilot_heartbeat.json
[2025-06-04 01:39:26] -rw------- 1 boinc boinc      1046 Jun  4 01:35 memory_monitor_summary.json
[2025-06-04 01:39:26] -rw------- 1 boinc boinc   1603667 Jun  4 01:35 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:39:26] -rw------- 1 boinc boinc    291394 Jun  4 01:35 log.45006595._004981.job.log.tgz.1
[2025-06-04 01:39:26] -rw------- 1 boinc boinc      7728 Jun  4 01:35 heartbeat.json
[2025-06-04 01:39:26] -rw------- 1 boinc boinc      4559 Jun  4 01:35 pilotlog.txt
[2025-06-04 01:39:26] -rw------- 1 boinc boinc   1026630 Jun  4 01:35 log.45006595._004981.job.log.1
[2025-06-04 01:39:26] -rw------- 1 boinc boinc       357 Jun  4 01:35 output.list
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc       620 Jun  4 01:35 runtime_log
[2025-06-04 01:39:26] -rw------- 1 boinc boinc   1341440 Jun  4 01:35 result.tar.gz
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc      9021 Jun  4 01:35 runtime_log.err
[2025-06-04 01:39:26] -rw------- 1 boinc boinc       664 Jun  4 01:35 mL0MDm0pNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLffKDm6qXngm.diag
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc        26 Jun  4 01:38 wrapper_checkpoint.txt
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc      8192 Jun  4 01:39 boinc_mmap_file
[2025-06-04 01:39:26] -rw-r--r-- 1 boinc boinc     20922 Jun  4 01:39 stderr.txt
[2025-06-04 01:39:26] HITS file was successfully produced:
[2025-06-04 01:39:26] -rw------- 1 boinc boinc 177083237 Jun  4 01:34 shared/HITS.pool.root.1
[2025-06-04 01:39:26]  *** Contents of shared directory: ***
[2025-06-04 01:39:26] total 387040
[2025-06-04 01:39:26] -rw-r--r-- 2 boinc boinc 217366387 Jun  3 22:35 ATLAS.root_0
[2025-06-04 01:39:26] -rw-r--r-- 2 boinc boinc     15093 Jun  3 22:35 start_atlas.sh
[2025-06-04 01:39:26] -rw-r--r-- 2 boinc boinc    508877 Jun  3 22:35 input.tar.gz
[2025-06-04 01:39:26] -rw------- 1 boinc boinc 177083237 Jun  4 01:34 HITS.pool.root.1
[2025-06-04 01:39:26] -rw------- 1 boinc boinc   1341440 Jun  4 01:35 result.tar.gz
01:39:28 (1271644): run_atlas exited; CPU time 41784.937606
01:39:28 (1271644): called boinc_finish(0)

</stderr_txt>
]]>

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