Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:30:16 (951252): wrapper (7.7.26015): starting
22:30:16 (951252): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 22:30:16] Arguments: --nthreads 4
[2025-06-04 22:30:16] Threads: 4
[2025-06-04 22:30:16] Checking for CVMFS
[2025-06-04 22:30:16] No cvmfs_config command found, will try listing directly
[2025-06-04 22:30:16] CVMFS is ok
[2025-06-04 22:30:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:30:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:30:16] Further information can be found at the LHC@home message board.
[2025-06-04 22:30:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:30:16] Checking for apptainer binary...
[2025-06-04 22:30:16] which: no apptainer in ((null))
[2025-06-04 22:30:16] apptainer is not installed, using version from CVMFS
[2025-06-04 22:30:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:30:17] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-04 22:30:17] apptainer works
[2025-06-04 22:30:17] Set ATHENA_PROC_NUMBER=4
[2025-06-04 22:30:17] Set ATHENA_CORE_NUMBER=4
[2025-06-04 22:30:17] Starting ATLAS job with PandaID=6677395137
[2025-06-04 22:30:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:11:50]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:11:50] 2025-06-04 23:10:24,290 | INFO     | total number of processed events: 400 (read)
[2025-06-05 01:11:50] 2025-06-04 23:10:24,294 | INFO     | executing command: lscpu
[2025-06-05 01:11:50] 2025-06-04 23:10:24,364 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:11:50] 2025-06-04 23:10:26,506 | INFO     | monitor loop #699: job 0:6677395137 is in state 'finished'
[2025-06-05 01:11:50] 2025-06-04 23:10:26,507 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:11:50] 2025-06-04 23:10:29,009 | INFO     | monitor loop #700: job 0:6677395137 is in state 'finished'
[2025-06-05 01:11:50] 2025-06-04 23:10:29,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:11:50] 2025-06-04 23:10:31,038 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 01:11:50] 2025-06-04 23:10:31,039 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6677395137/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:11:50] 2025-06-04 23:10:31,040 | INFO     | extracted standard info from prmon json
[2025-06-05 01:11:50] 2025-06-04 23:10:31,040 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:11:50] 2025-06-04 23:10:31,040 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:11:50] 2025-06-04 23:10:31,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:11:50] 2025-06-04 23:10:31,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:11:50] 2025-06-04 23:10:31,044 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:11:50] 2025-06-04 23:10:31,045 | INFO     | sum of square deviations: 1199940638.0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,046 | INFO     | sum of deviations: -9969847868.999998
[2025-06-05 01:11:50] 2025-06-04 23:10:31,046 | INFO     | mean x: 1749073816.0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,046 | INFO     | mean y: 2359230.6433121017
[2025-06-05 01:11:50] 2025-06-04 23:10:31,046 | INFO     | -- intersect: 14534744671.173159
[2025-06-05 01:11:50] 2025-06-04 23:10:31,046 | INFO     | intersect: 14534744671.173159
[2025-06-05 01:11:50] 2025-06-04 23:10:31,047 | INFO     | chi2: 1.713037533913693
[2025-06-05 01:11:50] 2025-06-04 23:10:31,047 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,048 | INFO     | sum of deviations: -9346086940.0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,048 | INFO     | mean x: 1749073663.5
[2025-06-05 01:11:50] 2025-06-04 23:10:31,048 | INFO     | mean y: 2360087.5789473685
[2025-06-05 01:11:50] 2025-06-04 23:10:31,048 | INFO     | -- intersect: 15014670198.424076
[2025-06-05 01:11:50] 2025-06-04 23:10:31,048 | INFO     | intersect: 15014670198.424076
[2025-06-05 01:11:50] 2025-06-04 23:10:31,049 | INFO     | chi2: 1.7117201797042987
[2025-06-05 01:11:50] 2025-06-04 23:10:31,049 | INFO     | current chi2=1.7117201797042987 (change=0.07690165471065762 %)
[2025-06-05 01:11:50] 2025-06-04 23:10:31,049 | INFO     | right removable region: 151
[2025-06-05 01:11:50] 2025-06-04 23:10:31,049 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,050 | INFO     | sum of deviations: -32672447289.999996
[2025-06-05 01:11:50] 2025-06-04 23:10:31,050 | INFO     | mean x: 1749073968.5
[2025-06-05 01:11:50] 2025-06-04 23:10:31,050 | INFO     | mean y: 2389949.513157895
[2025-06-05 01:11:50] 2025-06-04 23:10:31,050 | INFO     | -- intersect: 52483069775.95247
[2025-06-05 01:11:50] 2025-06-04 23:10:31,050 | INFO     | intersect: 52483069775.95247
[2025-06-05 01:11:50] 2025-06-04 23:10:31,051 | INFO     | chi2: 0.16723076518744884
[2025-06-05 01:11:50] 2025-06-04 23:10:31,051 | INFO     | current chi2=0.16723076518744884 (change=90.23776409584063 %)
[2025-06-05 01:11:50] 2025-06-04 23:10:31,051 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,052 | INFO     | sum of deviations: -26453483138.0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,052 | INFO     | mean x: 1749074121.0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,052 | INFO     | mean y: 2380794.7346938774
[2025-06-05 01:11:50] 2025-06-04 23:10:31,052 | INFO     | -- intersect: 46978890704.512146
[2025-06-05 01:11:50] 2025-06-04 23:10:31,052 | INFO     | intersect: 46978890704.512146
[2025-06-05 01:11:50] 2025-06-04 23:10:31,053 | INFO     | chi2: 0.14795263764267066
[2025-06-05 01:11:50] 2025-06-04 23:10:31,053 | INFO     | current chi2=0.14795263764267066 (change=11.52785943613266 %)
[2025-06-05 01:11:50] 2025-06-04 23:10:31,053 | INFO     | left removable region: 20
[2025-06-05 01:11:50] 2025-06-04 23:10:31,053 | INFO     | sum of square deviations: 697054930.0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,054 | INFO     | sum of deviations: -11491264851.000002
[2025-06-05 01:11:50] 2025-06-04 23:10:31,054 | INFO     | mean x: 1749074243.0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,054 | INFO     | mean y: 2358603.580152672
[2025-06-05 01:11:50] 2025-06-04 23:10:31,054 | INFO     | -- intersect: 28836636226.973965
[2025-06-05 01:11:50] 2025-06-04 23:10:31,054 | INFO     | intersect: 28836636226.973965
[2025-06-05 01:11:50] 2025-06-04 23:10:31,055 | INFO     | chi2: 0.048385985329075176
[2025-06-05 01:11:50] 2025-06-04 23:10:31,055 | INFO     | -- intersect: 28836636226.973965
[2025-06-05 01:11:50] 2025-06-04 23:10:31,055 | INFO     | current memory leak: -16.49 B/s (using 131 data points, chi2=0.05)
[2025-06-05 01:11:50] 2025-06-04 23:10:31,056 | INFO     | ..............................
[2025-06-05 01:11:50] 2025-06-04 23:10:31,056 | INFO     | . Timing measurements:
[2025-06-05 01:11:50] 2025-06-04 23:10:31,056 | INFO     | . get job = 0 s
[2025-06-05 01:11:50] 2025-06-04 23:10:31,056 | INFO     | . initial setup = 1 s
[2025-06-05 01:11:50] 2025-06-04 23:10:31,056 | INFO     | . payload setup = 7 s
[2025-06-05 01:11:50] 2025-06-04 23:10:31,056 | INFO     | . stage-in = 0 s
[2025-06-05 01:11:50] 2025-06-04 23:10:31,056 | INFO     | . payload execution = 9563 s
[2025-06-05 01:11:50] 2025-06-04 23:10:31,056 | INFO     | . stage-out = 0 s
[2025-06-05 01:11:50] 2025-06-04 23:10:31,056 | INFO     | . log creation = 0 s
[2025-06-05 01:11:50] 2025-06-04 23:10:31,056 | INFO     | ..............................
[2025-06-05 01:11:50] 2025-06-04 23:10:31,170 | INFO     | 
[2025-06-05 01:11:50] 2025-06-04 23:10:31,170 | INFO     | job summary report
[2025-06-05 01:11:50] 2025-06-04 23:10:31,170 | INFO     | --------------------------------------------------
[2025-06-05 01:11:50] 2025-06-04 23:10:31,170 | INFO     | PanDA job id: 6677395137
[2025-06-05 01:11:50] 2025-06-04 23:10:31,171 | INFO     | task id: 45006595
[2025-06-05 01:11:50] 2025-06-04 23:10:31,171 | INFO     | errors: (none)
[2025-06-05 01:11:50] 2025-06-04 23:10:31,171 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:11:50] 2025-06-04 23:10:31,171 | INFO     | pilot state: finished 
[2025-06-05 01:11:50] 2025-06-04 23:10:31,171 | INFO     | transexitcode: 0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,171 | INFO     | exeerrorcode: 0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,171 | INFO     | exeerrordiag: 
[2025-06-05 01:11:50] 2025-06-04 23:10:31,171 | INFO     | exitcode: 0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,171 | INFO     | exitmsg: OK
[2025-06-05 01:11:50] 2025-06-04 23:10:31,171 | INFO     | cpuconsumptiontime: 36417 s
[2025-06-05 01:11:50] 2025-06-04 23:10:31,171 | INFO     | nevents: 400
[2025-06-05 01:11:50] 2025-06-04 23:10:31,172 | INFO     | neventsw: 0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,172 | INFO     | pid: 962164
[2025-06-05 01:11:50] 2025-06-04 23:10:31,172 | INFO     | pgrp: 962164
[2025-06-05 01:11:50] 2025-06-04 23:10:31,172 | INFO     | corecount: 4
[2025-06-05 01:11:50] 2025-06-04 23:10:31,172 | INFO     | event service: False
[2025-06-05 01:11:50] 2025-06-04 23:10:31,172 | INFO     | sizes: {0: 2397176, 1: 2397375, 6: 2397581, 12: 2397609, 9574: 2425754, 9576: 2434717, 9578: 2434901, 9586: 2435071}
[2025-06-05 01:11:50] 2025-06-04 23:10:31,172 | INFO     | --------------------------------------------------
[2025-06-05 01:11:50] 2025-06-04 23:10:31,172 | INFO     | 
[2025-06-05 01:11:50] 2025-06-04 23:10:31,172 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-05 01:11:50] 2025-06-04 23:10:31,195 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,196 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,196 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,196 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,196 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,196 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,196 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,196 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,196 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,196 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,197 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,197 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,197 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,197 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,197 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,197 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,197 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,197 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:11:50] 2025-06-04 23:10:31,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,197 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:11:50] 2025-06-04 23:10:31,197 | INFO     | job 6677395137 has completed (purged errors)
[2025-06-05 01:11:50] 2025-06-04 23:10:31,198 | INFO     | overall cleanup function is called
[2025-06-05 01:11:50] 2025-06-04 23:10:32,205 | INFO     | --- collectZombieJob: --- 10, [962164]
[2025-06-05 01:11:50] 2025-06-04 23:10:32,205 | INFO     | zombie collector waiting for pid 962164
[2025-06-05 01:11:50] 2025-06-04 23:10:32,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:11:50] 2025-06-04 23:10:32,205 | INFO     | collected zombie processes
[2025-06-05 01:11:50] 2025-06-04 23:10:32,206 | INFO     | will attempt to kill all subprocesses of pid=962164
[2025-06-05 01:11:50] 2025-06-04 23:10:32,598 | INFO     | process IDs to be killed: [962164] (in reverse order)
[2025-06-05 01:11:50] 2025-06-04 23:10:32,708 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:11:50] 2025-06-04 23:10:32,708 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:11:50] 2025-06-04 23:10:32,720 | INFO     | did not find any defunct processes belonging to 962164
[2025-06-05 01:11:50] 2025-06-04 23:10:32,731 | INFO     | did not find any defunct processes belonging to 962164
[2025-06-05 01:11:50] 2025-06-04 23:10:32,731 | INFO     | ready for new job
[2025-06-05 01:11:50] 2025-06-04 23:10:32,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:11:50] 2025-06-04 23:10:32,733 | INFO     | **************************************
[2025-06-05 01:11:50] 2025-06-04 23:10:32,733 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:11:50] 2025-06-04 23:10:32,733 | INFO     | **************************************
[2025-06-05 01:11:50] 2025-06-04 23:10:32,733 | INFO     | 
[2025-06-05 01:11:50] 2025-06-04 23:10:32,737 | INFO     | architecture information:
[2025-06-05 01:11:50] 2025-06-04 23:10:32,737 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:11:50] 2025-06-04 23:10:32,755 | INFO     | cat /etc/os-release:
[2025-06-05 01:11:50] NAME="CentOS Linux"
[2025-06-05 01:11:50] VERSION="7 (Core)"
[2025-06-05 01:11:50] ID="centos"
[2025-06-05 01:11:50] ID_LIKE="rhel fedora"
[2025-06-05 01:11:50] VERSION_ID="7"
[2025-06-05 01:11:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:11:50] ANSI_COLOR="0;31"
[2025-06-05 01:11:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:11:50] HOME_URL="https://www.centos.org/"
[2025-06-05 01:11:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:11:50] 
[2025-06-05 01:11:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:11:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:11:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:11:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:11:50] 
[2025-06-05 01:11:50] 2025-06-04 23:10:32,755 | INFO     | **************************************
[2025-06-05 01:11:50] 2025-06-04 23:10:33,258 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-05 01:11:50] 2025-06-04 23:10:33,275 | INFO     | sufficient remaining disk space (660743389184 B)
[2025-06-05 01:11:50] 2025-06-04 23:10:33,276 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:11:50] 2025-06-04 23:10:33,276 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:11:50] 2025-06-04 23:10:33,276 | INFO     | update_server=False
[2025-06-05 01:11:50] 2025-06-04 23:10:33,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:11:50] 2025-06-04 23:10:33,277 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:11:50] 2025-06-04 23:10:33,277 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:11:50] 2025-06-04 23:10:33,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:11:50] 2025-06-04 23:10:33,277 | INFO     | aborting loop
[2025-06-05 01:11:50] 2025-06-04 23:10:33,278 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:11:50] 2025-06-04 23:10:33,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:11:50] 2025-06-04 23:10:33,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:11:50] 2025-06-04 23:10:33,428 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:11:50] 2025-06-04 23:10:33,613 | INFO     | all data control threads have been joined
[2025-06-05 01:11:50] 2025-06-04 23:10:33,849 | INFO     | all payload control threads have been joined
[2025-06-05 01:11:50] 2025-06-04 23:10:34,281 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:34,282 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:34,282 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:34,327 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:34,538 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:34,616 | INFO     | [data] control thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:34,634 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:34,834 | INFO     | all job control threads have been joined
[2025-06-05 01:11:50] 2025-06-04 23:10:34,850 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:34,854 | INFO     | [payload] control thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:35,087 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:35,186 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:35,387 | INFO     | [job] validate thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:35,434 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:35,839 | INFO     | [job] control thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:36,181 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:11:50] 2025-06-04 23:10:37,186 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:37,282 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:11:50] 2025-06-04 23:10:39,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23226477250368)>', '<ExcThread(monitor, started 23226021271296)>']
[2025-06-05 01:11:50] 2025-06-04 23:10:39,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:11:50] 2025-06-04 23:10:39,309 | INFO     | [monitor] control thread has ended
[2025-06-05 01:11:50] 2025-06-04 23:10:44,130 | INFO     | all workflow threads have been joined
[2025-06-05 01:11:50] 2025-06-04 23:10:44,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:11:50] 2025-06-04 23:10:44,131 | INFO     | traces error code: 0
[2025-06-05 01:11:50] 2025-06-04 23:10:44,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:11:50] 2025-06-04 23:10:44,278 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:11:50] 2025-06-04 23:10:44,281 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:11:50] 2025-06-04 23:10:44,284 [wrapper] pilotpid: 954959
[2025-06-05 01:11:50] 2025-06-04 23:10:44,287 [wrapper] Pilot exit status: 0
[2025-06-05 01:11:50] 2025-06-04 23:10:44,298 [wrapper] pandaids: 6677395137
[2025-06-05 01:11:50] 2025-06-04 23:10:44,366 [wrapper] cleanup supervisor_pilot 1271512 954960
[2025-06-05 01:11:50] 2025-06-04 23:10:44,369 [wrapper] Test setup, not cleaning
[2025-06-05 01:11:50] 2025-06-04 23:10:44,372 [wrapper] apfmon messages muted
[2025-06-05 01:11:50] 2025-06-04 23:10:44,375 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:11:50] 2025-06-04 23:10:44,378 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:11:50]  *** Error codes and diagnostics ***
[2025-06-05 01:11:50]     "exeErrorCode": 0,
[2025-06-05 01:11:50]     "exeErrorDiag": "",
[2025-06-05 01:11:50]     "pilotErrorCode": 0,
[2025-06-05 01:11:50]     "pilotErrorDiag": "",
[2025-06-05 01:11:50]  *** Listing of results directory ***
[2025-06-05 01:11:50] total 385596
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc    495897 Jun  2 21:34 pilot3.tar.gz
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc      5111 Jun  2 21:38 queuedata.json
[2025-06-05 01:11:50] -rwx------ 1 boinc boinc     37140 Jun  2 21:38 runpilot2-wrapper.sh
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc       100 Jun  4 22:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:11:50] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 22:30 run_atlas
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc       105 Jun  4 22:30 job.xml
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc      6636 Jun  4 22:30 init_data.xml
[2025-06-05 01:11:50] -rw-r--r-- 2 boinc boinc 214944146 Jun  4 22:30 EVNT.45006593._000388.pool.root.1
[2025-06-05 01:11:50] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:30 start_atlas.sh
[2025-06-05 01:11:50] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:30 shared
[2025-06-05 01:11:50] -rw-r--r-- 2 boinc boinc    508877 Jun  4 22:30 input.tar.gz
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:30 boinc_lockfile
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc      2522 Jun  4 22:30 pandaJob.out
[2025-06-05 01:11:50] -rw------- 1 boinc boinc    987032 Jun  4 22:30 agis_schedconf.cvmfs.json
[2025-06-05 01:11:50] -rw------- 1 boinc boinc   1598969 Jun  4 22:30 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:11:50] drwx------ 4 boinc boinc      4096 Jun  4 22:30 pilot3
[2025-06-05 01:11:50] -rw------- 1 boinc boinc 173702251 Jun  5 01:09 HITS.45006595._009682.pool.root.1
[2025-06-05 01:11:50] -rw------- 1 boinc boinc        95 Jun  5 01:10 pilot_heartbeat.json
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc       528 Jun  5 01:10 boinc_task_state.xml
[2025-06-05 01:11:50] -rw------- 1 boinc boinc      1034 Jun  5 01:10 memory_monitor_summary.json
[2025-06-05 01:11:50] -rw------- 1 boinc boinc    282152 Jun  5 01:10 log.45006595._009682.job.log.tgz.1
[2025-06-05 01:11:50] -rw------- 1 boinc boinc      7721 Jun  5 01:10 heartbeat.json
[2025-06-05 01:11:50] -rw------- 1 boinc boinc      4486 Jun  5 01:10 pilotlog.txt
[2025-06-05 01:11:50] -rw------- 1 boinc boinc    903344 Jun  5 01:10 log.45006595._009682.job.log.1
[2025-06-05 01:11:50] -rw------- 1 boinc boinc       357 Jun  5 01:10 output.list
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:10 runtime_log
[2025-06-05 01:11:50] -rw------- 1 boinc boinc   1208320 Jun  5 01:10 result.tar.gz
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc      9025 Jun  5 01:10 runtime_log.err
[2025-06-05 01:11:50] -rw------- 1 boinc boinc       663 Jun  5 01:10 kgTKDm99Pg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0PWKDm6bmD7m.diag
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc        26 Jun  5 01:11 wrapper_checkpoint.txt
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:11 boinc_mmap_file
[2025-06-05 01:11:50] -rw-r--r-- 1 boinc boinc     20922 Jun  5 01:11 stderr.txt
[2025-06-05 01:11:50] HITS file was successfully produced:
[2025-06-05 01:11:50] -rw------- 1 boinc boinc 173702251 Jun  5 01:09 shared/HITS.pool.root.1
[2025-06-05 01:11:50]  *** Contents of shared directory: ***
[2025-06-05 01:11:50] total 381244
[2025-06-05 01:11:50] -rw-r--r-- 2 boinc boinc 214944146 Jun  4 22:30 ATLAS.root_0
[2025-06-05 01:11:50] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:30 start_atlas.sh
[2025-06-05 01:11:50] -rw-r--r-- 2 boinc boinc    508877 Jun  4 22:30 input.tar.gz
[2025-06-05 01:11:50] -rw------- 1 boinc boinc 173702251 Jun  5 01:09 HITS.pool.root.1
[2025-06-05 01:11:50] -rw------- 1 boinc boinc   1208320 Jun  5 01:10 result.tar.gz
01:11:52 (951252): run_atlas exited; CPU time 36777.746084
01:11:52 (951252): called boinc_finish(0)

</stderr_txt>
]]>

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