Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:29:53 (10209): wrapper (7.7.26015): starting
08:29:53 (10209): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:29:53] Arguments: --nthreads 8
[2025-06-03 08:29:53] Threads: 8
[2025-06-03 08:29:53] Checking for CVMFS
[2025-06-03 08:29:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:29:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:29:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:29:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:29:54] 2.11.2.0 11156 31425 91312 146731 1 155 23557268 25165825 4053 130560 0 15321851 99.746 19593958 2067 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:29:54] CVMFS is ok
[2025-06-03 08:29:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:29:54] Checking for apptainer binary...
[2025-06-03 08:29:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:29:54] Running /usr/bin/apptainer --version
[2025-06-03 08:29:54] apptainer version 1.3.2-1.el7
[2025-06-03 08:29:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:29:55] cg-vwn264.simple-grid.lan
[2025-06-03 08:29:55] apptainer works
[2025-06-03 08:29:55] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:29:55] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:29:55] Starting ATLAS job with PandaID=6677394984
[2025-06-03 08:29:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:38:31]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:38:31] 2025-06-03 10:08:20,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:38:31] 2025-06-03 10:08:20,519 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:38:31] 2025-06-03 10:08:20,519 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:38:31] 2025-06-03 10:08:20,524 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:38:31] 2025-06-03 10:08:20,525 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,526 | INFO     | sum of deviations: -34891563240.0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,526 | INFO     | mean x: 1748938726.5
[2025-06-03 12:38:31] 2025-06-03 10:08:20,527 | INFO     | mean y: 2522856.783018868
[2025-06-03 12:38:31] 2025-06-03 10:08:20,527 | INFO     | -- intersect: 20657212717.403427
[2025-06-03 12:38:31] 2025-06-03 10:08:20,527 | INFO     | intersect: 20657212717.403427
[2025-06-03 12:38:31] 2025-06-03 10:08:20,527 | INFO     | chi2: 2.7776879695522076
[2025-06-03 12:38:31] 2025-06-03 10:08:20,528 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,529 | INFO     | sum of deviations: -19270711727.000008
[2025-06-03 12:38:31] 2025-06-03 10:08:20,529 | INFO     | mean x: 1748938574.0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,529 | INFO     | mean y: 2534319.835748792
[2025-06-03 12:38:31] 2025-06-03 10:08:20,530 | INFO     | -- intersect: 12256960684.465607
[2025-06-03 12:38:31] 2025-06-03 10:08:20,530 | INFO     | intersect: 12256960684.465607
[2025-06-03 12:38:31] 2025-06-03 10:08:20,530 | INFO     | chi2: 1.9665276981726443
[2025-06-03 12:38:31] 2025-06-03 10:08:20,530 | INFO     | current chi2=1.9665276981726443 (change=29.202713921475166 %)
[2025-06-03 12:38:31] 2025-06-03 10:08:20,531 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 12:38:31] 2025-06-03 10:08:20,532 | INFO     | sum of deviations: -18315643541.499985
[2025-06-03 12:38:31] 2025-06-03 10:08:20,532 | INFO     | mean x: 1748938421.5
[2025-06-03 12:38:31] 2025-06-03 10:08:20,532 | INFO     | mean y: 2535068.698019802
[2025-06-03 12:38:31] 2025-06-03 10:08:20,532 | INFO     | -- intersect: 12536105694.820763
[2025-06-03 12:38:31] 2025-06-03 10:08:20,532 | INFO     | intersect: 12536105694.820763
[2025-06-03 12:38:31] 2025-06-03 10:08:20,533 | INFO     | chi2: 1.9654668898457954
[2025-06-03 12:38:31] 2025-06-03 10:08:20,533 | INFO     | current chi2=1.9654668898457954 (change=0.05394321818271791 %)
[2025-06-03 12:38:31] 2025-06-03 10:08:20,533 | INFO     | right removable region: 201
[2025-06-03 12:38:31] 2025-06-03 10:08:20,533 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,535 | INFO     | sum of deviations: -73175924947.0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,535 | INFO     | mean x: 1748938879.0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,535 | INFO     | mean y: 2551210.8454106282
[2025-06-03 12:38:31] 2025-06-03 10:08:20,535 | INFO     | -- intersect: 46535816458.76025
[2025-06-03 12:38:31] 2025-06-03 10:08:20,535 | INFO     | intersect: 46535816458.76025
[2025-06-03 12:38:31] 2025-06-03 10:08:20,536 | INFO     | chi2: 1.0621755467889407
[2025-06-03 12:38:31] 2025-06-03 10:08:20,536 | INFO     | current chi2=1.0621755467889407 (change=61.760443993996404 %)
[2025-06-03 12:38:31] 2025-06-03 10:08:20,536 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 12:38:31] 2025-06-03 10:08:20,538 | INFO     | sum of deviations: -72200357681.0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,538 | INFO     | mean x: 1748939031.5
[2025-06-03 12:38:31] 2025-06-03 10:08:20,538 | INFO     | mean y: 2550404.5247524753
[2025-06-03 12:38:31] 2025-06-03 10:08:20,538 | INFO     | -- intersect: 49409965208.123474
[2025-06-03 12:38:31] 2025-06-03 10:08:20,538 | INFO     | intersect: 49409965208.123474
[2025-06-03 12:38:31] 2025-06-03 10:08:20,538 | INFO     | chi2: 1.0407495906668902
[2025-06-03 12:38:31] 2025-06-03 10:08:20,539 | INFO     | current chi2=1.0407495906668902 (change=2.0171765568152256 %)
[2025-06-03 12:38:31] 2025-06-03 10:08:20,539 | INFO     | left removable region: 20
[2025-06-03 12:38:31] 2025-06-03 10:08:20,539 | INFO     | sum of square deviations: 1838657730.0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,540 | INFO     | sum of deviations: -44210962680.000015
[2025-06-03 12:38:31] 2025-06-03 10:08:20,540 | INFO     | mean x: 1748939001.0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,541 | INFO     | mean y: 2555391.5801104973
[2025-06-03 12:38:31] 2025-06-03 10:08:20,541 | INFO     | -- intersect: 42056209881.59088
[2025-06-03 12:38:31] 2025-06-03 10:08:20,541 | INFO     | intersect: 42056209881.59088
[2025-06-03 12:38:31] 2025-06-03 10:08:20,541 | INFO     | chi2: 0.1879582400860368
[2025-06-03 12:38:31] 2025-06-03 10:08:20,541 | INFO     | -- intersect: 42056209881.59088
[2025-06-03 12:38:31] 2025-06-03 10:08:20,541 | INFO     | current memory leak: -24.05 B/s (using 181 data points, chi2=0.19)
[2025-06-03 12:38:31] 2025-06-03 10:08:20,542 | INFO     | ..............................
[2025-06-03 12:38:31] 2025-06-03 10:08:20,542 | INFO     | . Timing measurements:
[2025-06-03 12:38:31] 2025-06-03 10:08:20,542 | INFO     | . get job = 0 s
[2025-06-03 12:38:31] 2025-06-03 10:08:20,543 | INFO     | . initial setup = 2 s
[2025-06-03 12:38:31] 2025-06-03 10:08:20,543 | INFO     | . payload setup = 14 s
[2025-06-03 12:38:31] 2025-06-03 10:08:20,543 | INFO     | . stage-in = 0 s
[2025-06-03 12:38:31] 2025-06-03 10:08:20,543 | INFO     | . payload execution = 12947 s
[2025-06-03 12:38:31] 2025-06-03 10:08:20,543 | INFO     | . stage-out = 3 s
[2025-06-03 12:38:31] 2025-06-03 10:08:20,543 | INFO     | . log creation = 1 s
[2025-06-03 12:38:31] 2025-06-03 10:08:20,543 | INFO     | ..............................
[2025-06-03 12:38:31] 2025-06-03 10:08:20,693 | INFO     | 
[2025-06-03 12:38:31] 2025-06-03 10:08:20,694 | INFO     | job summary report
[2025-06-03 12:38:31] 2025-06-03 10:08:20,694 | INFO     | --------------------------------------------------
[2025-06-03 12:38:31] 2025-06-03 10:08:20,694 | INFO     | PanDA job id: 6677394984
[2025-06-03 12:38:31] 2025-06-03 10:08:20,694 | INFO     | task id: 45006595
[2025-06-03 12:38:31] 2025-06-03 10:08:20,694 | INFO     | errors: (none)
[2025-06-03 12:38:31] 2025-06-03 10:08:20,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:38:31] 2025-06-03 10:08:20,694 | INFO     | pilot state: finished 
[2025-06-03 12:38:31] 2025-06-03 10:08:20,694 | INFO     | transexitcode: 0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,694 | INFO     | exeerrorcode: 0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | exeerrordiag: 
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | exitcode: 0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | exitmsg: OK
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | cpuconsumptiontime: 49320 s
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | nevents: 400
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | neventsw: 0
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | pid: 25472
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | pgrp: 25472
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | corecount: 8
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | event service: False
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | sizes: {0: 2405176, 1: 2405176, 12: 2405204, 14: 2405438, 22: 2405466, 12965: 2434589, 12966: 2434716, 12970: 2443771, 13050: 2443885}
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | --------------------------------------------------
[2025-06-03 12:38:31] 2025-06-03 10:08:20,695 | INFO     | 
[2025-06-03 12:38:31] 2025-06-03 10:08:20,696 | INFO     | executing command: ls -lF /var/lib/boinc/slots/27
[2025-06-03 12:38:31] 2025-06-03 10:08:21,196 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,196 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,196 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,196 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,197 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,197 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,197 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,197 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,198 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,198 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:38:31] 2025-06-03 10:08:21,198 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,198 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:38:31] 2025-06-03 10:08:21,198 | INFO     | job 6677394984 has completed (purged errors)
[2025-06-03 12:38:31] 2025-06-03 10:08:21,198 | INFO     | overall cleanup function is called
[2025-06-03 12:38:31] 2025-06-03 10:08:22,207 | INFO     | --- collectZombieJob: --- 10, [25472]
[2025-06-03 12:38:31] 2025-06-03 10:08:22,208 | INFO     | zombie collector waiting for pid 25472
[2025-06-03 12:38:31] 2025-06-03 10:08:22,208 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:38:31] 2025-06-03 10:08:22,208 | INFO     | collected zombie processes
[2025-06-03 12:38:31] 2025-06-03 10:08:22,208 | INFO     | will attempt to kill all subprocesses of pid=25472
[2025-06-03 12:38:31] 2025-06-03 10:08:22,327 | INFO     | process IDs to be killed: [25472] (in reverse order)
[2025-06-03 12:38:31] 2025-06-03 10:08:22,944 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:38:31] 2025-06-03 10:08:22,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:38:31] 2025-06-03 10:08:22,953 | INFO     | did not find any defunct processes belonging to 25472
[2025-06-03 12:38:31] 2025-06-03 10:08:22,956 | INFO     | did not find any defunct processes belonging to 25472
[2025-06-03 12:38:31] 2025-06-03 10:08:22,956 | INFO     | ready for new job
[2025-06-03 12:38:31] 2025-06-03 10:08:22,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:38:31] 2025-06-03 10:08:22,958 | INFO     | **************************************
[2025-06-03 12:38:31] 2025-06-03 10:08:22,959 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:38:31] 2025-06-03 10:08:22,959 | INFO     | **************************************
[2025-06-03 12:38:31] 2025-06-03 10:08:22,959 | INFO     | 
[2025-06-03 12:38:31] 2025-06-03 10:08:22,959 | INFO     | pilot is running in a VM
[2025-06-03 12:38:31] 2025-06-03 10:08:22,959 | INFO     | architecture information:
[2025-06-03 12:38:31] 2025-06-03 10:08:22,964 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:38:31] 2025-06-03 10:08:23,078 | INFO     | cat /etc/os-release:
[2025-06-03 12:38:31] NAME="CentOS Linux"
[2025-06-03 12:38:31] VERSION="7 (Core)"
[2025-06-03 12:38:31] ID="centos"
[2025-06-03 12:38:31] ID_LIKE="rhel fedora"
[2025-06-03 12:38:31] VERSION_ID="7"
[2025-06-03 12:38:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:38:31] ANSI_COLOR="0;31"
[2025-06-03 12:38:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:38:31] HOME_URL="https://www.centos.org/"
[2025-06-03 12:38:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:38:31] 
[2025-06-03 12:38:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:38:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:38:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:38:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:38:31] 
[2025-06-03 12:38:31] 2025-06-03 10:08:23,078 | INFO     | **************************************
[2025-06-03 12:38:31] 2025-06-03 10:08:23,582 | INFO     | executing command: df -mP /var/lib/boinc/slots/27
[2025-06-03 12:38:31] 2025-06-03 10:08:23,804 | INFO     | sufficient remaining disk space (496744005632 B)
[2025-06-03 12:38:31] 2025-06-03 10:08:23,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:38:31] 2025-06-03 10:08:23,805 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:38:31] 2025-06-03 10:08:23,805 | INFO     | update_server=False
[2025-06-03 12:38:31] 2025-06-03 10:08:23,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:38:31] 2025-06-03 10:08:23,805 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:38:31] 2025-06-03 10:08:23,806 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:38:31] 2025-06-03 10:08:23,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:38:31] 2025-06-03 10:08:23,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:38:31] 2025-06-03 10:08:23,873 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 12:38:31] 2025-06-03 10:08:23,874 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 12:38:31] 2025-06-03 10:08:23,874 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:38:31] 2025-06-03 10:08:23,874 | INFO     | will abort loop
[2025-06-03 12:38:31] 2025-06-03 10:08:24,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:38:31] 2025-06-03 10:08:24,155 | INFO     | all data control threads have been joined
[2025-06-03 12:38:31] 2025-06-03 10:08:24,183 | INFO     | all job control threads have been joined
[2025-06-03 12:38:31] 2025-06-03 10:08:24,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:38:31] 2025-06-03 10:08:24,650 | INFO     | all payload control threads have been joined
[2025-06-03 12:38:31] 2025-06-03 10:08:24,812 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:24,881 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:24,969 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:25,055 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:25,162 | INFO     | [data] control thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:25,167 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:25,189 | INFO     | [job] control thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:25,647 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:25,656 | INFO     | [payload] control thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:25,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:38:31] 2025-06-03 10:08:25,759 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:25,826 | INFO     | [job] validate thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:26,061 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:26,160 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:26,198 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:26,696 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:28,216 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:38:31] 2025-06-03 10:08:28,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140659013482304)>', '<ExcThread(monitor, started 140658316646144)>']
[2025-06-03 12:38:31] 2025-06-03 10:08:28,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:38:31] 2025-06-03 10:08:28,836 | INFO     | [monitor] control thread has ended
[2025-06-03 12:38:31] 2025-06-03 10:08:33,537 | INFO     | all workflow threads have been joined
[2025-06-03 12:38:31] 2025-06-03 10:08:33,538 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:38:31] 2025-06-03 10:08:33,538 | INFO     | traces error code: 0
[2025-06-03 12:38:31] 2025-06-03 10:08:33,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:38:31] 2025-06-03 10:08:33,893 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:38:31] 2025-06-03 10:08:33,991 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:38:31] 2025-06-03 10:08:34,076 [wrapper] pilotpid: 14668
[2025-06-03 12:38:31] 2025-06-03 10:08:34,137 [wrapper] Pilot exit status: 0
[2025-06-03 12:38:31] 2025-06-03 10:08:34,587 [wrapper] pandaids: 6677394984
[2025-06-03 12:38:31] 2025-06-03 10:08:34,673 [wrapper] cleanup supervisor_pilot  8436 14669
[2025-06-03 12:38:31] 2025-06-03 10:08:34,774 [wrapper] Test setup, not cleaning
[2025-06-03 12:38:31] 2025-06-03 10:08:34,798 [wrapper] apfmon messages muted
[2025-06-03 12:38:31] 2025-06-03 10:08:34,828 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:38:31] 2025-06-03 10:08:34,859 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:38:31]  *** Error codes and diagnostics ***
[2025-06-03 12:38:31]     "exeErrorCode": 0,
[2025-06-03 12:38:31]     "exeErrorDiag": "",
[2025-06-03 12:38:31]     "pilotErrorCode": 0,
[2025-06-03 12:38:31]     "pilotErrorDiag": "",
[2025-06-03 12:38:31]  *** Listing of results directory ***
[2025-06-03 12:38:31] total 392872
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:18 pilot3.tar.gz
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:30 queuedata.json
[2025-06-03 12:38:31] -rwx------. 1 boinc boinc     37140 Jun  2 21:31 runpilot2-wrapper.sh
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:38:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:29 run_atlas
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:29 job.xml
[2025-06-03 12:38:31] -rw-r--r--. 2 boinc boinc 215898367 Jun  3 08:29 EVNT.45006593._000382.pool.root.1
[2025-06-03 12:38:31] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:29 start_atlas.sh
[2025-06-03 12:38:31] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:29 shared
[2025-06-03 12:38:31] -rw-r--r--. 2 boinc boinc    508884 Jun  3 08:29 input.tar.gz
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc      6392 Jun  3 08:29 init_data.xml
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:29 boinc_lockfile
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc      2520 Jun  3 08:29 pandaJob.out
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc    986901 Jun  3 08:30 agis_schedconf.cvmfs.json
[2025-06-03 12:38:31] drwx------. 4 boinc boinc      4096 Jun  3 08:30 pilot3
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc 179595701 Jun  3 12:05 HITS.45006595._009530.pool.root.1
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc       531 Jun  3 12:06 boinc_task_state.xml
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc      1017 Jun  3 12:06 memory_monitor_summary.json
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc   1603667 Jun  3 12:06 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc    363689 Jun  3 12:06 log.45006595._009530.job.log.tgz.1
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc        95 Jun  3 12:07 pilot_heartbeat.json
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc      7689 Jun  3 12:08 heartbeat.json
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc      4726 Jun  3 12:08 pilotlog.txt
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc   1130456 Jun  3 12:08 log.45006595._009530.job.log.1
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc       357 Jun  3 12:08 output.list
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:08 runtime_log
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc   1515520 Jun  3 12:08 result.tar.gz
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc      8673 Jun  3 12:08 runtime_log.err
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc       656 Jun  3 12:08 nhNKDmD4Pg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwOWKDm1vllXm.diag
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc      8192 Jun  3 12:38 boinc_mmap_file
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc        28 Jun  3 12:38 wrapper_checkpoint.txt
[2025-06-03 12:38:31] -rw-r--r--. 1 boinc boinc     20514 Jun  3 12:38 stderr.txt
[2025-06-03 12:38:31] HITS file was successfully produced:
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc 179595701 Jun  3 12:05 shared/HITS.pool.root.1
[2025-06-03 12:38:31]  *** Contents of shared directory: ***
[2025-06-03 12:38:31] total 388224
[2025-06-03 12:38:31] -rw-r--r--. 2 boinc boinc 215898367 Jun  3 08:29 ATLAS.root_0
[2025-06-03 12:38:31] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:29 start_atlas.sh
[2025-06-03 12:38:31] -rw-r--r--. 2 boinc boinc    508884 Jun  3 08:29 input.tar.gz
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc 179595701 Jun  3 12:05 HITS.pool.root.1
[2025-06-03 12:38:31] -rw-------. 1 boinc boinc   1515520 Jun  3 12:08 result.tar.gz
12:38:33 (10209): run_atlas exited; CPU time 49476.085037
12:38:33 (10209): called boinc_finish(0)

</stderr_txt>
]]>

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