Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:37:11 (14793): wrapper (7.7.26015): starting
08:37:11 (14793): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:37:11] Arguments: --nthreads 8
[2025-06-03 08:37:11] Threads: 8
[2025-06-03 08:37:11] Checking for CVMFS
[2025-06-03 08:37:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:37:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:37:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:37:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:37:14] 2.11.2.0 15878 31416 95292 146731 1 19 21743982 25165824 4636 130560 0 15853918 99.754 19000658 2125 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:37:14] CVMFS is ok
[2025-06-03 08:37:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:37:14] Checking for apptainer binary...
[2025-06-03 08:37:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:37:14] Running /usr/bin/apptainer --version
[2025-06-03 08:37:14] apptainer version 1.3.2-1.el7
[2025-06-03 08:37:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:37:29] cg-vwn433.simple-grid.lan
[2025-06-03 08:37:29] apptainer works
[2025-06-03 08:37:29] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:37:29] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:37:29] Starting ATLAS job with PandaID=6677395905
[2025-06-03 08:37:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:40:15]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:40:15] 2025-06-03 10:32:37,129 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6677395905/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:40:15] 2025-06-03 10:32:37,130 | INFO     | extracted standard info from prmon json
[2025-06-03 12:40:15] 2025-06-03 10:32:37,130 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:40:15] 2025-06-03 10:32:37,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:40:15] 2025-06-03 10:32:37,131 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:40:15] 2025-06-03 10:32:37,131 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:40:15] 2025-06-03 10:32:37,143 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:40:15] 2025-06-03 10:32:37,143 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 12:40:15] 2025-06-03 10:32:37,145 | INFO     | sum of deviations: 51342970927.99999
[2025-06-03 12:40:15] 2025-06-03 10:32:37,145 | INFO     | mean x: 1748940004.0
[2025-06-03 12:40:15] 2025-06-03 10:32:37,145 | INFO     | mean y: 2444540.6529680365
[2025-06-03 12:40:15] 2025-06-03 10:32:37,146 | INFO     | -- intersect: -27568661818.394123
[2025-06-03 12:40:15] 2025-06-03 10:32:37,146 | INFO     | intersect: -27568661818.394123
[2025-06-03 12:40:15] 2025-06-03 10:32:37,146 | INFO     | chi2: 6.902399182500504
[2025-06-03 12:40:15] 2025-06-03 10:32:37,147 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 12:40:15] 2025-06-03 10:32:37,148 | INFO     | sum of deviations: 64528579891.99999
[2025-06-03 12:40:15] 2025-06-03 10:32:37,149 | INFO     | mean x: 1748939851.5
[2025-06-03 12:40:15] 2025-06-03 10:32:37,149 | INFO     | mean y: 2453576.831775701
[2025-06-03 12:40:15] 2025-06-03 10:32:37,149 | INFO     | -- intersect: -37135393241.69963
[2025-06-03 12:40:15] 2025-06-03 10:32:37,149 | INFO     | intersect: -37135393241.69963
[2025-06-03 12:40:15] 2025-06-03 10:32:37,149 | INFO     | chi2: 6.202658362473945
[2025-06-03 12:40:15] 2025-06-03 10:32:37,149 | INFO     | current chi2=6.202658362473945 (change=10.137646367955606 %)
[2025-06-03 12:40:15] 2025-06-03 10:32:37,150 | INFO     | right removable region: 213
[2025-06-03 12:40:15] 2025-06-03 10:32:37,150 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 12:40:15] 2025-06-03 10:32:37,152 | INFO     | sum of deviations: -25155883238.499985
[2025-06-03 12:40:15] 2025-06-03 10:32:37,152 | INFO     | mean x: 1748940156.5
[2025-06-03 12:40:15] 2025-06-03 10:32:37,152 | INFO     | mean y: 2498008.855140187
[2025-06-03 12:40:15] 2025-06-03 10:32:37,152 | INFO     | -- intersect: 14480354220.512896
[2025-06-03 12:40:15] 2025-06-03 10:32:37,152 | INFO     | intersect: 14480354220.512896
[2025-06-03 12:40:15] 2025-06-03 10:32:37,153 | INFO     | chi2: 1.9769526187750683
[2025-06-03 12:40:15] 2025-06-03 10:32:37,153 | INFO     | current chi2=1.9769526187750683 (change=71.35847164871033 %)
[2025-06-03 12:40:15] 2025-06-03 10:32:37,153 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 12:40:15] 2025-06-03 10:32:37,155 | INFO     | sum of deviations: -54243214219.999985
[2025-06-03 12:40:15] 2025-06-03 10:32:37,155 | INFO     | mean x: 1748940309.0
[2025-06-03 12:40:15] 2025-06-03 10:32:37,155 | INFO     | mean y: 2519157.846889952
[2025-06-03 12:40:15] 2025-06-03 10:32:37,155 | INFO     | -- intersect: 33515500412.394817
[2025-06-03 12:40:15] 2025-06-03 10:32:37,155 | INFO     | intersect: 33515500412.394817
[2025-06-03 12:40:15] 2025-06-03 10:32:37,156 | INFO     | chi2: 0.9903654517325888
[2025-06-03 12:40:15] 2025-06-03 10:32:37,156 | INFO     | current chi2=0.9903654517325888 (change=49.90444169844469 %)
[2025-06-03 12:40:15] 2025-06-03 10:32:37,156 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 12:40:15] 2025-06-03 10:32:37,158 | INFO     | sum of deviations: -53948580011.0
[2025-06-03 12:40:15] 2025-06-03 10:32:37,158 | INFO     | mean x: 1748940461.5
[2025-06-03 12:40:15] 2025-06-03 10:32:37,158 | INFO     | mean y: 2518891.9607843137
[2025-06-03 12:40:15] 2025-06-03 10:32:37,158 | INFO     | -- intersect: 35844875204.11925
[2025-06-03 12:40:15] 2025-06-03 10:32:37,158 | INFO     | intersect: 35844875204.11925
[2025-06-03 12:40:15] 2025-06-03 10:32:37,159 | INFO     | chi2: 0.9708859791836271
[2025-06-03 12:40:15] 2025-06-03 10:32:37,159 | INFO     | current chi2=0.9708859791836271 (change=1.9668974230556528 %)
[2025-06-03 12:40:15] 2025-06-03 10:32:37,159 | INFO     | left removable region: 30
[2025-06-03 12:40:15] 2025-06-03 10:32:37,159 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 12:40:15] 2025-06-03 10:32:37,167 | INFO     | sum of deviations: -19393379128.000004
[2025-06-03 12:40:15] 2025-06-03 10:32:37,167 | INFO     | mean x: 1748940736.0
[2025-06-03 12:40:15] 2025-06-03 10:32:37,167 | INFO     | mean y: 2512714.9672131147
[2025-06-03 12:40:15] 2025-06-03 10:32:37,168 | INFO     | -- intersect: 17851346957.921345
[2025-06-03 12:40:15] 2025-06-03 10:32:37,168 | INFO     | intersect: 17851346957.921345
[2025-06-03 12:40:15] 2025-06-03 10:32:37,168 | INFO     | chi2: 0.1321209510851665
[2025-06-03 12:40:15] 2025-06-03 10:32:37,168 | INFO     | -- intersect: 17851346957.921345
[2025-06-03 12:40:15] 2025-06-03 10:32:37,168 | INFO     | current memory leak: -10.21 B/s (using 183 data points, chi2=0.13)
[2025-06-03 12:40:15] 2025-06-03 10:32:37,169 | INFO     | ..............................
[2025-06-03 12:40:15] 2025-06-03 10:32:37,169 | INFO     | . Timing measurements:
[2025-06-03 12:40:15] 2025-06-03 10:32:37,169 | INFO     | . get job = 0 s
[2025-06-03 12:40:15] 2025-06-03 10:32:37,170 | INFO     | . initial setup = 9 s
[2025-06-03 12:40:15] 2025-06-03 10:32:37,170 | INFO     | . payload setup = 172 s
[2025-06-03 12:40:15] 2025-06-03 10:32:37,170 | INFO     | . stage-in = 0 s
[2025-06-03 12:40:15] 2025-06-03 10:32:37,170 | INFO     | . payload execution = 13463 s
[2025-06-03 12:40:15] 2025-06-03 10:32:37,170 | INFO     | . stage-out = 3 s
[2025-06-03 12:40:15] 2025-06-03 10:32:37,170 | INFO     | . log creation = 1 s
[2025-06-03 12:40:15] 2025-06-03 10:32:37,170 | INFO     | ..............................
[2025-06-03 12:40:15] 2025-06-03 10:32:37,488 | INFO     | 
[2025-06-03 12:40:15] 2025-06-03 10:32:37,488 | INFO     | job summary report
[2025-06-03 12:40:15] 2025-06-03 10:32:37,488 | INFO     | --------------------------------------------------
[2025-06-03 12:40:15] 2025-06-03 10:32:37,488 | INFO     | PanDA job id: 6677395905
[2025-06-03 12:40:15] 2025-06-03 10:32:37,488 | INFO     | task id: 45006595
[2025-06-03 12:40:15] 2025-06-03 10:32:37,488 | INFO     | errors: (none)
[2025-06-03 12:40:15] 2025-06-03 10:32:37,488 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:40:15] 2025-06-03 10:32:37,489 | INFO     | pilot state: finished 
[2025-06-03 12:40:15] 2025-06-03 10:32:37,489 | INFO     | transexitcode: 0
[2025-06-03 12:40:15] 2025-06-03 10:32:37,489 | INFO     | exeerrorcode: 0
[2025-06-03 12:40:15] 2025-06-03 10:32:37,489 | INFO     | exeerrordiag: 
[2025-06-03 12:40:15] 2025-06-03 10:32:37,489 | INFO     | exitcode: 0
[2025-06-03 12:40:15] 2025-06-03 10:32:37,489 | INFO     | exitmsg: OK
[2025-06-03 12:40:15] 2025-06-03 10:32:37,489 | INFO     | cpuconsumptiontime: 47564 s
[2025-06-03 12:40:15] 2025-06-03 10:32:37,489 | INFO     | nevents: 400
[2025-06-03 12:40:15] 2025-06-03 10:32:37,489 | INFO     | neventsw: 0
[2025-06-03 12:40:15] 2025-06-03 10:32:37,489 | INFO     | pid: 30103
[2025-06-03 12:40:15] 2025-06-03 10:32:37,489 | INFO     | pgrp: 30103
[2025-06-03 12:40:15] 2025-06-03 10:32:37,490 | INFO     | corecount: 8
[2025-06-03 12:40:15] 2025-06-03 10:32:37,490 | INFO     | event service: False
[2025-06-03 12:40:15] 2025-06-03 10:32:37,490 | INFO     | sizes: {0: 2405007, 1: 2405206, 12: 2405206, 23: 2405234, 34: 2405262, 44: 2405290, 55: 2405446, 66: 2405474, 77: 2405502, 87: 2405558, 90: 2405792, 98: 2406100, 1
[2025-06-03 12:40:15] 2025-06-03 10:32:37,490 | INFO     | --------------------------------------------------
[2025-06-03 12:40:15] 2025-06-03 10:32:37,490 | INFO     | 
[2025-06-03 12:40:15] 2025-06-03 10:32:37,490 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 12:40:15] 2025-06-03 10:32:37,765 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,766 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,766 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,766 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,766 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,766 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,766 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,766 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,767 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,767 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:40:15] 2025-06-03 10:32:37,767 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,768 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:40:15] 2025-06-03 10:32:37,768 | INFO     | job 6677395905 has completed (purged errors)
[2025-06-03 12:40:15] 2025-06-03 10:32:37,768 | INFO     | overall cleanup function is called
[2025-06-03 12:40:15] 2025-06-03 10:32:38,780 | INFO     | --- collectZombieJob: --- 10, [30103]
[2025-06-03 12:40:15] 2025-06-03 10:32:38,781 | INFO     | zombie collector waiting for pid 30103
[2025-06-03 12:40:15] 2025-06-03 10:32:38,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:40:15] 2025-06-03 10:32:38,781 | INFO     | collected zombie processes
[2025-06-03 12:40:15] 2025-06-03 10:32:38,781 | INFO     | will attempt to kill all subprocesses of pid=30103
[2025-06-03 12:40:15] 2025-06-03 10:32:38,886 | INFO     | process IDs to be killed: [30103] (in reverse order)
[2025-06-03 12:40:15] 2025-06-03 10:32:39,555 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:40:15] 2025-06-03 10:32:39,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:40:15] 2025-06-03 10:32:39,559 | INFO     | did not find any defunct processes belonging to 30103
[2025-06-03 12:40:15] 2025-06-03 10:32:39,562 | INFO     | did not find any defunct processes belonging to 30103
[2025-06-03 12:40:15] 2025-06-03 10:32:39,562 | INFO     | ready for new job
[2025-06-03 12:40:15] 2025-06-03 10:32:39,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:40:15] 2025-06-03 10:32:39,565 | INFO     | **************************************
[2025-06-03 12:40:15] 2025-06-03 10:32:39,565 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:40:15] 2025-06-03 10:32:39,565 | INFO     | **************************************
[2025-06-03 12:40:15] 2025-06-03 10:32:39,565 | INFO     | 
[2025-06-03 12:40:15] 2025-06-03 10:32:39,566 | INFO     | pilot is running in a VM
[2025-06-03 12:40:15] 2025-06-03 10:32:39,566 | INFO     | architecture information:
[2025-06-03 12:40:15] 2025-06-03 10:32:39,570 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:40:15] 2025-06-03 10:32:39,700 | INFO     | cat /etc/os-release:
[2025-06-03 12:40:15] NAME="CentOS Linux"
[2025-06-03 12:40:15] VERSION="7 (Core)"
[2025-06-03 12:40:15] ID="centos"
[2025-06-03 12:40:15] ID_LIKE="rhel fedora"
[2025-06-03 12:40:15] VERSION_ID="7"
[2025-06-03 12:40:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:40:15] ANSI_COLOR="0;31"
[2025-06-03 12:40:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:40:15] HOME_URL="https://www.centos.org/"
[2025-06-03 12:40:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:40:15] 
[2025-06-03 12:40:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:40:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:40:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:40:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:40:15] 
[2025-06-03 12:40:15] 2025-06-03 10:32:39,700 | INFO     | **************************************
[2025-06-03 12:40:15] 2025-06-03 10:32:40,204 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 12:40:15] 2025-06-03 10:32:40,346 | INFO     | sufficient remaining disk space (496342401024 B)
[2025-06-03 12:40:15] 2025-06-03 10:32:40,346 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:40:15] 2025-06-03 10:32:40,346 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:40:15] 2025-06-03 10:32:40,347 | INFO     | update_server=False
[2025-06-03 12:40:15] 2025-06-03 10:32:40,347 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:40:15] 2025-06-03 10:32:40,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:40:15] 2025-06-03 10:32:40,347 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:40:15] 2025-06-03 10:32:40,348 | INFO     | aborting loop
[2025-06-03 12:40:15] 2025-06-03 10:32:40,513 | INFO     | all job control threads have been joined
[2025-06-03 12:40:15] 2025-06-03 10:32:40,518 | INFO     | all data control threads have been joined
[2025-06-03 12:40:15] 2025-06-03 10:32:40,706 | INFO     | all payload control threads have been joined
[2025-06-03 12:40:15] 2025-06-03 10:32:41,029 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:40:15] 2025-06-03 10:32:41,030 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:40:15] 2025-06-03 10:32:41,030 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:40:15] 2025-06-03 10:32:41,353 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:41,353 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:41,494 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:41,520 | INFO     | [job] control thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:41,525 | INFO     | [data] control thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:41,625 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:41,713 | INFO     | [payload] control thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:41,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:40:15] 2025-06-03 10:32:42,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:42,346 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:40:15] 2025-06-03 10:32:42,355 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:42,406 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:42,407 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:42,502 | INFO     | [job] validate thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:42,569 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:42,604 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:43,352 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:45,994 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:40:15] 2025-06-03 10:32:47,304 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140537077921600)>', '<ExcThread(monitor, started 140536413411072)>']
[2025-06-03 12:40:15] 2025-06-03 10:32:48,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:40:15] 2025-06-03 10:32:48,072 | INFO     | [monitor] control thread has ended
[2025-06-03 12:40:15] 2025-06-03 10:32:52,330 | INFO     | all workflow threads have been joined
[2025-06-03 12:40:15] 2025-06-03 10:32:52,330 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:40:15] 2025-06-03 10:32:52,330 | INFO     | traces error code: 0
[2025-06-03 12:40:15] 2025-06-03 10:32:52,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:40:15] 2025-06-03 10:32:52,667 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:40:15] 2025-06-03 10:32:52,735 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:40:15] 2025-06-03 10:32:52,808 [wrapper] pilotpid: 21516
[2025-06-03 12:40:15] 2025-06-03 10:32:52,914 [wrapper] Pilot exit status: 0
[2025-06-03 12:40:15] 2025-06-03 10:32:53,074 [wrapper] pandaids: 6677395905
[2025-06-03 12:40:15] 2025-06-03 10:32:53,205 [wrapper] cleanup supervisor_pilot 25302 21517
[2025-06-03 12:40:15] 2025-06-03 10:32:53,268 [wrapper] Test setup, not cleaning
[2025-06-03 12:40:15] 2025-06-03 10:32:53,369 [wrapper] apfmon messages muted
[2025-06-03 12:40:15] 2025-06-03 10:32:53,453 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:40:15] 2025-06-03 10:32:53,533 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:40:15]  *** Error codes and diagnostics ***
[2025-06-03 12:40:15]     "exeErrorCode": 0,
[2025-06-03 12:40:15]     "exeErrorDiag": "",
[2025-06-03 12:40:15]     "pilotErrorCode": 0,
[2025-06-03 12:40:15]     "pilotErrorDiag": "",
[2025-06-03 12:40:15]  *** Listing of results directory ***
[2025-06-03 12:40:15] total 387020
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:34 pilot3.tar.gz
[2025-06-03 12:40:15] -rwx------. 1 boinc boinc     37140 Jun  2 21:42 runpilot2-wrapper.sh
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:42 queuedata.json
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:40:15] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:37 run_atlas
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:37 job.xml
[2025-06-03 12:40:15] -rw-r--r--. 2 boinc boinc 214983262 Jun  3 08:37 EVNT.45006593._000392.pool.root.1
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc      6392 Jun  3 08:37 init_data.xml
[2025-06-03 12:40:15] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:37 start_atlas.sh
[2025-06-03 12:40:15] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:37 shared
[2025-06-03 12:40:15] -rw-r--r--. 2 boinc boinc    508880 Jun  3 08:37 input.tar.gz
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:37 boinc_lockfile
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc      2522 Jun  3 08:37 pandaJob.out
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc    986901 Jun  3 08:40 agis_schedconf.cvmfs.json
[2025-06-03 12:40:15] drwx------. 4 boinc boinc      4096 Jun  3 08:40 pilot3
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc 174349481 Jun  3 12:30 HITS.45006595._009801.pool.root.1
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc       531 Jun  3 12:30 boinc_task_state.xml
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc      1018 Jun  3 12:31 memory_monitor_summary.json
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc   1603667 Jun  3 12:31 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc    395819 Jun  3 12:31 log.45006595._009801.job.log.tgz.1
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc        95 Jun  3 12:31 pilot_heartbeat.json
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc      7687 Jun  3 12:32 heartbeat.json
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc      4416 Jun  3 12:32 pilotlog.txt
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc   1182734 Jun  3 12:32 log.45006595._009801.job.log.1
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc       357 Jun  3 12:32 output.list
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:32 runtime_log
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc   1597440 Jun  3 12:32 result.tar.gz
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc      8659 Jun  3 12:32 runtime_log.err
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc       657 Jun  3 12:32 ouRNDm9DQg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmoRWKDmgNivJm.diag
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc      8192 Jun  3 12:40 boinc_mmap_file
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc        28 Jun  3 12:40 wrapper_checkpoint.txt
[2025-06-03 12:40:15] -rw-r--r--. 1 boinc boinc     20539 Jun  3 12:40 stderr.txt
[2025-06-03 12:40:15] HITS file was successfully produced:
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc 174349481 Jun  3 12:30 shared/HITS.pool.root.1
[2025-06-03 12:40:15]  *** Contents of shared directory: ***
[2025-06-03 12:40:15] total 382288
[2025-06-03 12:40:15] -rw-r--r--. 2 boinc boinc 214983262 Jun  3 08:37 ATLAS.root_0
[2025-06-03 12:40:15] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:37 start_atlas.sh
[2025-06-03 12:40:15] -rw-r--r--. 2 boinc boinc    508880 Jun  3 08:37 input.tar.gz
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc 174349481 Jun  3 12:30 HITS.pool.root.1
[2025-06-03 12:40:15] -rw-------. 1 boinc boinc   1597440 Jun  3 12:32 result.tar.gz
12:40:17 (14793): run_atlas exited; CPU time 47758.058421
12:40:17 (14793): called boinc_finish(0)

</stderr_txt>
]]>

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