Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:47:54 (599917): wrapper (7.7.26015): starting
12:47:54 (599917): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 12:47:54] Arguments: --nthreads 4
[2025-06-03 12:47:54] Threads: 4
[2025-06-03 12:47:54] Checking for CVMFS
[2025-06-03 12:47:54] No cvmfs_config command found, will try listing directly
[2025-06-03 12:47:54] CVMFS is ok
[2025-06-03 12:47:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:47:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:47:54] Further information can be found at the LHC@home message board.
[2025-06-03 12:47:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:47:54] Checking for apptainer binary...
[2025-06-03 12:47:54] which: no apptainer in ((null))
[2025-06-03 12:47:54] apptainer is not installed, using version from CVMFS
[2025-06-03 12:47:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:47:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2025-06-03 12:47:54] apptainer works
[2025-06-03 12:47:54] Set ATHENA_PROC_NUMBER=4
[2025-06-03 12:47:54] Set ATHENA_CORE_NUMBER=4
[2025-06-03 12:47:54] Starting ATLAS job with PandaID=6677394905
[2025-06-03 12:47:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:50:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:50:26] 2025-06-03 13:49:27,942 | INFO     | executing command: lscpu
[2025-06-03 15:50:26] 2025-06-03 13:49:27,983 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 15:50:26] 2025-06-03 13:49:28,593 | INFO     | PID=603495 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 15:50:26] 2025-06-03 13:49:28,594 | INFO     | .. there are 4 such processes running
[2025-06-03 15:50:26] 2025-06-03 13:49:30,073 | INFO     | monitor loop #804: job 0:6677394905 is in state 'finished'
[2025-06-03 15:50:26] 2025-06-03 13:49:30,073 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 15:50:26] 2025-06-03 13:49:31,462 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 15:50:26] 2025-06-03 13:49:31,462 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6677394905/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:50:26] 2025-06-03 13:49:31,463 | INFO     | extracted standard info from prmon json
[2025-06-03 15:50:26] 2025-06-03 13:49:31,463 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:50:26] 2025-06-03 13:49:31,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:50:26] 2025-06-03 13:49:31,464 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:50:26] 2025-06-03 13:49:31,464 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:50:26] 2025-06-03 13:49:31,468 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:50:26] 2025-06-03 13:49:31,468 | INFO     | sum of square deviations: 1748737904.5
[2025-06-03 15:50:26] 2025-06-03 13:49:31,469 | INFO     | sum of deviations: 17074248615.000004
[2025-06-03 15:50:26] 2025-06-03 13:49:31,469 | INFO     | mean x: 1748953107.5
[2025-06-03 15:50:26] 2025-06-03 13:49:31,469 | INFO     | mean y: 2321676.4606741574
[2025-06-03 15:50:26] 2025-06-03 13:49:31,470 | INFO     | -- intersect: -17074028127.925821
[2025-06-03 15:50:26] 2025-06-03 13:49:31,470 | INFO     | intersect: -17074028127.925821
[2025-06-03 15:50:26] 2025-06-03 13:49:31,470 | INFO     | chi2: 1.6963602933055273
[2025-06-03 15:50:26] 2025-06-03 13:49:31,470 | INFO     | sum of square deviations: 1605470102.0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,472 | INFO     | sum of deviations: 16659416590.0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,472 | INFO     | mean x: 1748952955.0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,472 | INFO     | mean y: 2321235.2716763006
[2025-06-03 15:50:26] 2025-06-03 13:49:31,472 | INFO     | -- intersect: -18145968064.765705
[2025-06-03 15:50:26] 2025-06-03 13:49:31,472 | INFO     | intersect: -18145968064.765705
[2025-06-03 15:50:26] 2025-06-03 13:49:31,472 | INFO     | chi2: 1.6979781421211855
[2025-06-03 15:50:26] 2025-06-03 13:49:31,473 | INFO     | current chi2=1.6979781421211855 (change=-0.09537176872406304 %)
[2025-06-03 15:50:26] 2025-06-03 13:49:31,473 | INFO     | right removable region: 172
[2025-06-03 15:50:26] 2025-06-03 13:49:31,473 | INFO     | sum of square deviations: 1605470102.0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,474 | INFO     | sum of deviations: -11930554338.000004
[2025-06-03 15:50:26] 2025-06-03 13:49:31,474 | INFO     | mean x: 1748953260.0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,474 | INFO     | mean y: 2352221.479768786
[2025-06-03 15:50:26] 2025-06-03 13:49:31,475 | INFO     | -- intersect: 12999157255.132303
[2025-06-03 15:50:26] 2025-06-03 13:49:31,475 | INFO     | intersect: 12999157255.132303
[2025-06-03 15:50:26] 2025-06-03 13:49:31,475 | INFO     | chi2: 0.03944960251561767
[2025-06-03 15:50:26] 2025-06-03 13:49:31,475 | INFO     | current chi2=0.03944960251561767 (change=97.67445614759431 %)
[2025-06-03 15:50:26] 2025-06-03 13:49:31,476 | INFO     | sum of square deviations: 1470248962.0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,477 | INFO     | sum of deviations: -11091740013.5
[2025-06-03 15:50:26] 2025-06-03 13:49:31,477 | INFO     | mean x: 1748953412.5
[2025-06-03 15:50:26] 2025-06-03 13:49:31,477 | INFO     | mean y: 2351253.4464285714
[2025-06-03 15:50:26] 2025-06-03 13:49:31,477 | INFO     | -- intersect: 13196672112.401485
[2025-06-03 15:50:26] 2025-06-03 13:49:31,477 | INFO     | intersect: 13196672112.401485
[2025-06-03 15:50:26] 2025-06-03 13:49:31,477 | INFO     | chi2: 0.036595585595570565
[2025-06-03 15:50:26] 2025-06-03 13:49:31,478 | INFO     | current chi2=0.036595585595570565 (change=7.234589800790078 %)
[2025-06-03 15:50:26] 2025-06-03 13:49:31,478 | INFO     | left removable region: 20
[2025-06-03 15:50:26] 2025-06-03 13:49:31,478 | INFO     | sum of square deviations: 1088905998.0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,479 | INFO     | sum of deviations: -6440618022.0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,479 | INFO     | mean x: 1748953534.5
[2025-06-03 15:50:26] 2025-06-03 13:49:31,479 | INFO     | mean y: 2346172.9736842103
[2025-06-03 15:50:26] 2025-06-03 13:49:31,479 | INFO     | -- intersect: 10346987193.071453
[2025-06-03 15:50:26] 2025-06-03 13:49:31,479 | INFO     | intersect: 10346987193.071453
[2025-06-03 15:50:26] 2025-06-03 13:49:31,480 | INFO     | chi2: 0.030688400650956585
[2025-06-03 15:50:26] 2025-06-03 13:49:31,480 | INFO     | -- intersect: 10346987193.071453
[2025-06-03 15:50:26] 2025-06-03 13:49:31,480 | INFO     | current memory leak: -5.91 B/s (using 152 data points, chi2=0.03)
[2025-06-03 15:50:26] 2025-06-03 13:49:31,481 | INFO     | ..............................
[2025-06-03 15:50:26] 2025-06-03 13:49:31,481 | INFO     | . Timing measurements:
[2025-06-03 15:50:26] 2025-06-03 13:49:31,481 | INFO     | . get job = 0 s
[2025-06-03 15:50:26] 2025-06-03 13:49:31,481 | INFO     | . initial setup = 1 s
[2025-06-03 15:50:26] 2025-06-03 13:49:31,481 | INFO     | . payload setup = 6 s
[2025-06-03 15:50:26] 2025-06-03 13:49:31,481 | INFO     | . stage-in = 0 s
[2025-06-03 15:50:26] 2025-06-03 13:49:31,481 | INFO     | . payload execution = 10854 s
[2025-06-03 15:50:26] 2025-06-03 13:49:31,481 | INFO     | . stage-out = 1 s
[2025-06-03 15:50:26] 2025-06-03 13:49:31,481 | INFO     | . log creation = 0 s
[2025-06-03 15:50:26] 2025-06-03 13:49:31,481 | INFO     | ..............................
[2025-06-03 15:50:26] 2025-06-03 13:49:31,594 | INFO     | 
[2025-06-03 15:50:26] 2025-06-03 13:49:31,595 | INFO     | job summary report
[2025-06-03 15:50:26] 2025-06-03 13:49:31,595 | INFO     | --------------------------------------------------
[2025-06-03 15:50:26] 2025-06-03 13:49:31,595 | INFO     | PanDA job id: 6677394905
[2025-06-03 15:50:26] 2025-06-03 13:49:31,595 | INFO     | task id: 45006595
[2025-06-03 15:50:26] 2025-06-03 13:49:31,595 | INFO     | errors: (none)
[2025-06-03 15:50:26] 2025-06-03 13:49:31,596 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:50:26] 2025-06-03 13:49:31,596 | INFO     | pilot state: finished 
[2025-06-03 15:50:26] 2025-06-03 13:49:31,596 | INFO     | transexitcode: 0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,596 | INFO     | exeerrorcode: 0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,596 | INFO     | exeerrordiag: 
[2025-06-03 15:50:26] 2025-06-03 13:49:31,596 | INFO     | exitcode: 0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,596 | INFO     | exitmsg: OK
[2025-06-03 15:50:26] 2025-06-03 13:49:31,596 | INFO     | cpuconsumptiontime: 41654 s
[2025-06-03 15:50:26] 2025-06-03 13:49:31,596 | INFO     | nevents: 400
[2025-06-03 15:50:26] 2025-06-03 13:49:31,597 | INFO     | neventsw: 0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,597 | INFO     | pid: 610382
[2025-06-03 15:50:26] 2025-06-03 13:49:31,597 | INFO     | pgrp: 610382
[2025-06-03 15:50:26] 2025-06-03 13:49:31,597 | INFO     | corecount: 4
[2025-06-03 15:50:26] 2025-06-03 13:49:31,597 | INFO     | event service: False
[2025-06-03 15:50:26] 2025-06-03 13:49:31,597 | INFO     | sizes: {0: 2404350, 1: 2405217, 5: 2405423, 12: 2405479, 10864: 2434406, 10865: 2434405, 10867: 2443552, 10870: 2443608, 10873: 2443778}
[2025-06-03 15:50:26] 2025-06-03 13:49:31,597 | INFO     | --------------------------------------------------
[2025-06-03 15:50:26] 2025-06-03 13:49:31,597 | INFO     | 
[2025-06-03 15:50:26] 2025-06-03 13:49:31,598 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-06-03 15:50:26] 2025-06-03 13:49:31,616 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,617 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,617 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,617 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,617 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,617 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,618 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,618 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,619 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:50:26] 2025-06-03 13:49:31,619 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,619 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:50:26] 2025-06-03 13:49:31,620 | INFO     | job 6677394905 has completed (purged errors)
[2025-06-03 15:50:26] 2025-06-03 13:49:31,620 | INFO     | overall cleanup function is called
[2025-06-03 15:50:26] 2025-06-03 13:49:32,628 | INFO     | --- collectZombieJob: --- 10, [610382]
[2025-06-03 15:50:26] 2025-06-03 13:49:32,628 | INFO     | zombie collector waiting for pid 610382
[2025-06-03 15:50:26] 2025-06-03 13:49:32,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:50:26] 2025-06-03 13:49:32,629 | INFO     | collected zombie processes
[2025-06-03 15:50:26] 2025-06-03 13:49:32,629 | INFO     | will attempt to kill all subprocesses of pid=610382
[2025-06-03 15:50:26] 2025-06-03 13:49:32,887 | INFO     | process IDs to be killed: [610382] (in reverse order)
[2025-06-03 15:50:26] 2025-06-03 13:49:32,956 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:50:26] 2025-06-03 13:49:32,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:50:26] 2025-06-03 13:49:32,964 | INFO     | did not find any defunct processes belonging to 610382
[2025-06-03 15:50:26] 2025-06-03 13:49:32,971 | INFO     | did not find any defunct processes belonging to 610382
[2025-06-03 15:50:26] 2025-06-03 13:49:32,971 | INFO     | ready for new job
[2025-06-03 15:50:26] 2025-06-03 13:49:32,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:50:26] 2025-06-03 13:49:32,973 | INFO     | **************************************
[2025-06-03 15:50:26] 2025-06-03 13:49:32,973 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:50:26] 2025-06-03 13:49:32,973 | INFO     | **************************************
[2025-06-03 15:50:26] 2025-06-03 13:49:32,974 | INFO     | 
[2025-06-03 15:50:26] 2025-06-03 13:49:32,976 | INFO     | architecture information:
[2025-06-03 15:50:26] 2025-06-03 13:49:32,976 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:50:26] 2025-06-03 13:49:32,989 | INFO     | cat /etc/os-release:
[2025-06-03 15:50:26] NAME="CentOS Linux"
[2025-06-03 15:50:26] VERSION="7 (Core)"
[2025-06-03 15:50:26] ID="centos"
[2025-06-03 15:50:26] ID_LIKE="rhel fedora"
[2025-06-03 15:50:26] VERSION_ID="7"
[2025-06-03 15:50:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:50:26] ANSI_COLOR="0;31"
[2025-06-03 15:50:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:50:26] HOME_URL="https://www.centos.org/"
[2025-06-03 15:50:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:50:26] 
[2025-06-03 15:50:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:50:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:50:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:50:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:50:26] 
[2025-06-03 15:50:26] 2025-06-03 13:49:32,990 | INFO     | **************************************
[2025-06-03 15:50:26] 2025-06-03 13:49:33,493 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-06-03 15:50:26] 2025-06-03 13:49:33,508 | INFO     | sufficient remaining disk space (3462094913536 B)
[2025-06-03 15:50:26] 2025-06-03 13:49:33,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:50:26] 2025-06-03 13:49:33,508 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:50:26] 2025-06-03 13:49:33,509 | INFO     | update_server=False
[2025-06-03 15:50:26] 2025-06-03 13:49:33,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:50:26] 2025-06-03 13:49:33,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:50:26] 2025-06-03 13:49:33,509 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 15:50:26] 2025-06-03 13:49:33,510 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:50:26] 2025-06-03 13:49:33,510 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:50:26] 2025-06-03 13:49:33,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:50:26] 2025-06-03 13:49:33,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:50:26] 2025-06-03 13:49:33,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:50:26] 2025-06-03 13:49:33,582 | INFO     | aborting loop
[2025-06-03 15:50:26] 2025-06-03 13:49:33,804 | INFO     | all data control threads have been joined
[2025-06-03 15:50:26] 2025-06-03 13:49:33,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:50:26] 2025-06-03 13:49:34,511 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:34,514 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:34,541 | INFO     | all payload control threads have been joined
[2025-06-03 15:50:26] 2025-06-03 13:49:34,588 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:34,641 | INFO     | all job control threads have been joined
[2025-06-03 15:50:26] 2025-06-03 13:49:34,809 | INFO     | [data] control thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:35,089 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:35,108 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:35,126 | INFO     | [job] validate thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:35,414 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:35,418 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:35,502 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:35,516 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:35,546 | INFO     | [payload] control thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:35,582 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:35,646 | INFO     | [job] control thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:37,950 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:44,228 | INFO     | job.realtimelogging is not enabled
[2025-06-03 15:50:26] 2025-06-03 13:49:45,234 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:50:26] 2025-06-03 13:49:45,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23040193267520)>', '<ExcThread(monitor, started 23039477540608)>']
[2025-06-03 15:50:26] 2025-06-03 13:49:45,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:50:26] 2025-06-03 13:49:45,559 | INFO     | [monitor] control thread has ended
[2025-06-03 15:50:26] 2025-06-03 13:49:50,575 | INFO     | all workflow threads have been joined
[2025-06-03 15:50:26] 2025-06-03 13:49:50,575 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:50:26] 2025-06-03 13:49:50,575 | INFO     | traces error code: 0
[2025-06-03 15:50:26] 2025-06-03 13:49:50,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:50:26] 2025-06-03 13:49:50,700 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:50:26] 2025-06-03 13:49:50,703 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:50:26] 2025-06-03 13:49:50,705 [wrapper] pilotpid: 603495
[2025-06-03 15:50:26] 2025-06-03 13:49:50,707 [wrapper] Pilot exit status: 0
[2025-06-03 15:50:26] 2025-06-03 13:49:50,717 [wrapper] pandaids: 6677394905
[2025-06-03 15:50:26] 2025-06-03 13:49:50,760 [wrapper] cleanup supervisor_pilot  801808 603496
[2025-06-03 15:50:26] 2025-06-03 13:49:50,762 [wrapper] Test setup, not cleaning
[2025-06-03 15:50:26] 2025-06-03 13:49:50,765 [wrapper] apfmon messages muted
[2025-06-03 15:50:26] 2025-06-03 13:49:50,768 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:50:26] 2025-06-03 13:49:50,771 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:50:26]  *** Error codes and diagnostics ***
[2025-06-03 15:50:26]     "exeErrorCode": 0,
[2025-06-03 15:50:26]     "exeErrorDiag": "",
[2025-06-03 15:50:26]     "pilotErrorCode": 0,
[2025-06-03 15:50:26]     "pilotErrorDiag": "",
[2025-06-03 15:50:26]  *** Listing of results directory ***
[2025-06-03 15:50:26] total 384688
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc    495897 Jun  2 21:18 pilot3.tar.gz
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc      5111 Jun  2 21:29 queuedata.json
[2025-06-03 15:50:26] -rwx------ 1 boinc boinc     37140 Jun  2 21:29 runpilot2-wrapper.sh
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc       100 Jun  3 12:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:50:26] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 12:47 run_atlas
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc       105 Jun  3 12:47 job.xml
[2025-06-03 15:50:26] -rw-r--r-- 2 boinc boinc 214208028 Jun  3 12:47 EVNT.45006593._000378.pool.root.1
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc      6417 Jun  3 12:47 init_data.xml
[2025-06-03 15:50:26] -rw-r--r-- 2 boinc boinc     15093 Jun  3 12:47 start_atlas.sh
[2025-06-03 15:50:26] drwxrwx--x 2 boinc boinc      4096 Jun  3 12:47 shared
[2025-06-03 15:50:26] -rw-r--r-- 2 boinc boinc    508881 Jun  3 12:47 input.tar.gz
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc         0 Jun  3 12:47 boinc_lockfile
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc      2522 Jun  3 12:47 pandaJob.out
[2025-06-03 15:50:26] -rw------- 1 boinc boinc    985490 Jun  3 12:48 agis_schedconf.cvmfs.json
[2025-06-03 15:50:26] drwx------ 4 boinc boinc      4096 Jun  3 12:48 pilot3
[2025-06-03 15:50:26] -rw------- 1 boinc boinc 173173114 Jun  3 15:48 HITS.45006595._009451.pool.root.1
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc       528 Jun  3 15:48 boinc_task_state.xml
[2025-06-03 15:50:26] -rw------- 1 boinc boinc        95 Jun  3 15:49 pilot_heartbeat.json
[2025-06-03 15:50:26] -rw------- 1 boinc boinc      1035 Jun  3 15:49 memory_monitor_summary.json
[2025-06-03 15:50:26] -rw------- 1 boinc boinc   1603667 Jun  3 15:49 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:50:26] -rw------- 1 boinc boinc    317162 Jun  3 15:49 log.45006595._009451.job.log.tgz.1
[2025-06-03 15:50:26] -rw------- 1 boinc boinc      7723 Jun  3 15:49 heartbeat.json
[2025-06-03 15:50:26] -rw------- 1 boinc boinc      4559 Jun  3 15:49 pilotlog.txt
[2025-06-03 15:50:26] -rw------- 1 boinc boinc   1034025 Jun  3 15:49 log.45006595._009451.job.log.1
[2025-06-03 15:50:26] -rw------- 1 boinc boinc       357 Jun  3 15:49 output.list
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc       620 Jun  3 15:49 runtime_log
[2025-06-03 15:50:26] -rw------- 1 boinc boinc   1372160 Jun  3 15:49 result.tar.gz
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc      9021 Jun  3 15:49 runtime_log.err
[2025-06-03 15:50:26] -rw------- 1 boinc boinc       664 Jun  3 15:49 mGNLDm91Pg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpNWKDmK1di9m.diag
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc        26 Jun  3 15:49 wrapper_checkpoint.txt
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc      8192 Jun  3 15:50 boinc_mmap_file
[2025-06-03 15:50:26] -rw-r--r-- 1 boinc boinc     21002 Jun  3 15:50 stderr.txt
[2025-06-03 15:50:26] HITS file was successfully produced:
[2025-06-03 15:50:26] -rw------- 1 boinc boinc 173173114 Jun  3 15:48 shared/HITS.pool.root.1
[2025-06-03 15:50:26]  *** Contents of shared directory: ***
[2025-06-03 15:50:26] total 380168
[2025-06-03 15:50:26] -rw-r--r-- 2 boinc boinc 214208028 Jun  3 12:47 ATLAS.root_0
[2025-06-03 15:50:26] -rw-r--r-- 2 boinc boinc     15093 Jun  3 12:47 start_atlas.sh
[2025-06-03 15:50:26] -rw-r--r-- 2 boinc boinc    508881 Jun  3 12:47 input.tar.gz
[2025-06-03 15:50:26] -rw------- 1 boinc boinc 173173114 Jun  3 15:48 HITS.pool.root.1
[2025-06-03 15:50:26] -rw------- 1 boinc boinc   1372160 Jun  3 15:49 result.tar.gz
15:50:28 (599917): run_atlas exited; CPU time 41929.031592
15:50:28 (599917): called boinc_finish(0)

</stderr_txt>
]]>

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