Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:51:19 (7475): wrapper (7.7.26015): starting
12:51:19 (7475): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:51:19] Arguments: --nthreads 8
[2025-06-03 12:51:19] Threads: 8
[2025-06-03 12:51:19] Checking for CVMFS
[2025-06-03 12:51:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:51:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:51:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:51:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:51:21] 2.11.2.0 32728 31659 91500 146737 1 59 21452578 25165825 4632 130560 0 16023053 99.804 18006086 2171 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 12:51:21] CVMFS is ok
[2025-06-03 12:51:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:51:21] Checking for apptainer binary...
[2025-06-03 12:51:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:51:21] Running /usr/bin/apptainer --version
[2025-06-03 12:51:21] apptainer version 1.3.2-1.el7
[2025-06-03 12:51:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:45:26] cg-vwn337.simple-grid.lan
[2025-06-03 13:45:26] apptainer works
[2025-06-03 13:45:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:45:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:45:26] Starting ATLAS job with PandaID=6677394570
[2025-06-03 13:45:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:54:51]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:54:51] 2025-06-03 15:37:58,583 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677394570/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:54:51] 2025-06-03 15:37:58,584 | INFO     | extracted standard info from prmon json
[2025-06-03 18:54:51] 2025-06-03 15:37:58,584 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:54:51] 2025-06-03 15:37:58,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:54:51] 2025-06-03 15:37:58,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:54:51] 2025-06-03 15:37:58,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:54:51] 2025-06-03 15:37:58,590 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:54:51] 2025-06-03 15:37:58,590 | INFO     | sum of square deviations: 3579276412.5
[2025-06-03 18:54:51] 2025-06-03 15:37:58,592 | INFO     | sum of deviations: -65430402397.499985
[2025-06-03 18:54:51] 2025-06-03 15:37:58,592 | INFO     | mean x: 1748958068.5
[2025-06-03 18:54:51] 2025-06-03 15:37:58,592 | INFO     | mean y: 2570098.4292035396
[2025-06-03 18:54:51] 2025-06-03 15:37:58,592 | INFO     | -- intersect: 31974124404.39588
[2025-06-03 18:54:51] 2025-06-03 15:37:58,593 | INFO     | intersect: 31974124404.39588
[2025-06-03 18:54:51] 2025-06-03 15:37:58,593 | INFO     | chi2: 2.660841471621054
[2025-06-03 18:54:51] 2025-06-03 15:37:58,593 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 18:54:51] 2025-06-03 15:37:58,595 | INFO     | sum of deviations: -47431819959.00001
[2025-06-03 18:54:51] 2025-06-03 15:37:58,595 | INFO     | mean x: 1748957916.0
[2025-06-03 18:54:51] 2025-06-03 15:37:58,596 | INFO     | mean y: 2581736.3393665156
[2025-06-03 18:54:51] 2025-06-03 15:37:58,596 | INFO     | -- intersect: 24788373426.430332
[2025-06-03 18:54:51] 2025-06-03 15:37:58,596 | INFO     | intersect: 24788373426.430332
[2025-06-03 18:54:51] 2025-06-03 15:37:58,596 | INFO     | chi2: 1.8918031906462422
[2025-06-03 18:54:51] 2025-06-03 15:37:58,596 | INFO     | current chi2=1.8918031906462422 (change=28.90207061100464 %)
[2025-06-03 18:54:51] 2025-06-03 15:37:58,597 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 18:54:51] 2025-06-03 15:37:58,598 | INFO     | sum of deviations: -44619360303.00001
[2025-06-03 18:54:51] 2025-06-03 15:37:58,598 | INFO     | mean x: 1748957763.5
[2025-06-03 18:54:51] 2025-06-03 15:37:58,599 | INFO     | mean y: 2583668.037037037
[2025-06-03 18:54:51] 2025-06-03 15:37:58,599 | INFO     | -- intersect: 24975674243.74068
[2025-06-03 18:54:51] 2025-06-03 15:37:58,599 | INFO     | intersect: 24975674243.74068
[2025-06-03 18:54:51] 2025-06-03 15:37:58,599 | INFO     | chi2: 1.8911096428566851
[2025-06-03 18:54:51] 2025-06-03 15:37:58,599 | INFO     | current chi2=1.8911096428566851 (change=0.03666067342450068 %)
[2025-06-03 18:54:51] 2025-06-03 15:37:58,599 | INFO     | right removable region: 215
[2025-06-03 18:54:51] 2025-06-03 15:37:58,600 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 18:54:51] 2025-06-03 15:37:58,602 | INFO     | sum of deviations: -104466588159.00005
[2025-06-03 18:54:51] 2025-06-03 15:37:58,602 | INFO     | mean x: 1748958221.0
[2025-06-03 18:54:51] 2025-06-03 15:37:58,602 | INFO     | mean y: 2595499.742081448
[2025-06-03 18:54:51] 2025-06-03 15:37:58,602 | INFO     | -- intersect: 54592268560.28055
[2025-06-03 18:54:51] 2025-06-03 15:37:58,602 | INFO     | intersect: 54592268560.28055
[2025-06-03 18:54:51] 2025-06-03 15:37:58,602 | INFO     | chi2: 1.0112432542853342
[2025-06-03 18:54:51] 2025-06-03 15:37:58,603 | INFO     | current chi2=1.0112432542853342 (change=61.995358796431475 %)
[2025-06-03 18:54:51] 2025-06-03 15:37:58,603 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 18:54:51] 2025-06-03 15:37:58,605 | INFO     | sum of deviations: -104810845410.5
[2025-06-03 18:54:51] 2025-06-03 15:37:58,605 | INFO     | mean x: 1748958373.5
[2025-06-03 18:54:51] 2025-06-03 15:37:58,605 | INFO     | mean y: 2595700.0694444445
[2025-06-03 18:54:51] 2025-06-03 15:37:58,605 | INFO     | -- intersect: 58664388045.14577
[2025-06-03 18:54:51] 2025-06-03 15:37:58,605 | INFO     | intersect: 58664388045.14577
[2025-06-03 18:54:51] 2025-06-03 15:37:58,605 | INFO     | chi2: 0.9726983221141934
[2025-06-03 18:54:51] 2025-06-03 15:37:58,606 | INFO     | current chi2=0.9726983221141934 (change=3.811638001816025 %)
[2025-06-03 18:54:51] 2025-06-03 15:37:58,606 | INFO     | left removable region: 20
[2025-06-03 18:54:51] 2025-06-03 15:37:58,606 | INFO     | sum of square deviations: 2299168690.0
[2025-06-03 18:54:51] 2025-06-03 15:37:58,607 | INFO     | sum of deviations: -75000950580.00002
[2025-06-03 18:54:51] 2025-06-03 15:37:58,608 | INFO     | mean x: 1748958343.0
[2025-06-03 18:54:51] 2025-06-03 15:37:58,608 | INFO     | mean y: 2605559.153846154
[2025-06-03 18:54:51] 2025-06-03 15:37:58,608 | INFO     | -- intersect: 57055199751.284096
[2025-06-03 18:54:51] 2025-06-03 15:37:58,608 | INFO     | intersect: 57055199751.284096
[2025-06-03 18:54:51] 2025-06-03 15:37:58,608 | INFO     | chi2: 0.16513903823513573
[2025-06-03 18:54:51] 2025-06-03 15:37:58,608 | INFO     | -- intersect: 57055199751.284096
[2025-06-03 18:54:51] 2025-06-03 15:37:58,609 | INFO     | current memory leak: -32.62 B/s (using 195 data points, chi2=0.17)
[2025-06-03 18:54:51] 2025-06-03 15:37:58,610 | INFO     | ..............................
[2025-06-03 18:54:51] 2025-06-03 15:37:58,610 | INFO     | . Timing measurements:
[2025-06-03 18:54:51] 2025-06-03 15:37:58,610 | INFO     | . get job = 0 s
[2025-06-03 18:54:51] 2025-06-03 15:37:58,610 | INFO     | . initial setup = 2 s
[2025-06-03 18:54:51] 2025-06-03 15:37:58,610 | INFO     | . payload setup = 13 s
[2025-06-03 18:54:51] 2025-06-03 15:37:58,610 | INFO     | . stage-in = 0 s
[2025-06-03 18:54:51] 2025-06-03 15:37:58,610 | INFO     | . payload execution = 13790 s
[2025-06-03 18:54:51] 2025-06-03 15:37:58,610 | INFO     | . stage-out = 3 s
[2025-06-03 18:54:51] 2025-06-03 15:37:58,611 | INFO     | . log creation = 1 s
[2025-06-03 18:54:51] 2025-06-03 15:37:58,611 | INFO     | ..............................
[2025-06-03 18:54:51] 2025-06-03 15:37:58,816 | INFO     | 
[2025-06-03 18:54:51] 2025-06-03 15:37:58,817 | INFO     | job summary report
[2025-06-03 18:54:51] 2025-06-03 15:37:58,817 | INFO     | --------------------------------------------------
[2025-06-03 18:54:51] 2025-06-03 15:37:58,817 | INFO     | PanDA job id: 6677394570
[2025-06-03 18:54:51] 2025-06-03 15:37:58,817 | INFO     | task id: 45006595
[2025-06-03 18:54:51] 2025-06-03 15:37:58,817 | INFO     | errors: (none)
[2025-06-03 18:54:51] 2025-06-03 15:37:58,817 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:54:51] 2025-06-03 15:37:58,817 | INFO     | pilot state: finished 
[2025-06-03 18:54:51] 2025-06-03 15:37:58,817 | INFO     | transexitcode: 0
[2025-06-03 18:54:51] 2025-06-03 15:37:58,818 | INFO     | exeerrorcode: 0
[2025-06-03 18:54:51] 2025-06-03 15:37:58,818 | INFO     | exeerrordiag: 
[2025-06-03 18:54:51] 2025-06-03 15:37:58,818 | INFO     | exitcode: 0
[2025-06-03 18:54:51] 2025-06-03 15:37:58,818 | INFO     | exitmsg: OK
[2025-06-03 18:54:51] 2025-06-03 15:37:58,818 | INFO     | cpuconsumptiontime: 49949 s
[2025-06-03 18:54:51] 2025-06-03 15:37:58,818 | INFO     | nevents: 400
[2025-06-03 18:54:51] 2025-06-03 15:37:58,818 | INFO     | neventsw: 0
[2025-06-03 18:54:51] 2025-06-03 15:37:58,818 | INFO     | pid: 17446
[2025-06-03 18:54:51] 2025-06-03 15:37:58,818 | INFO     | pgrp: 17446
[2025-06-03 18:54:51] 2025-06-03 15:37:58,818 | INFO     | corecount: 8
[2025-06-03 18:54:51] 2025-06-03 15:37:58,818 | INFO     | event service: False
[2025-06-03 18:54:51] 2025-06-03 15:37:58,819 | INFO     | sizes: {0: 2405007, 1: 2405206, 9: 2405412, 12: 2405440, 13808: 2435284, 13813: 2444225, 13815: 2444409, 13905: 2444579}
[2025-06-03 18:54:51] 2025-06-03 15:37:58,819 | INFO     | --------------------------------------------------
[2025-06-03 18:54:51] 2025-06-03 15:37:58,819 | INFO     | 
[2025-06-03 18:54:51] 2025-06-03 15:37:58,819 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 18:54:51] 2025-06-03 15:37:59,348 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,348 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,349 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,349 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,349 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,349 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,349 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,350 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,350 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,350 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,350 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,350 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:54:51] 2025-06-03 15:37:59,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,350 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:54:51] 2025-06-03 15:37:59,350 | INFO     | job 6677394570 has completed (purged errors)
[2025-06-03 18:54:51] 2025-06-03 15:37:59,350 | INFO     | overall cleanup function is called
[2025-06-03 18:54:51] 2025-06-03 15:38:00,359 | INFO     | --- collectZombieJob: --- 10, [17446]
[2025-06-03 18:54:51] 2025-06-03 15:38:00,360 | INFO     | zombie collector waiting for pid 17446
[2025-06-03 18:54:51] 2025-06-03 15:38:00,360 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:54:51] 2025-06-03 15:38:00,360 | INFO     | collected zombie processes
[2025-06-03 18:54:51] 2025-06-03 15:38:00,360 | INFO     | will attempt to kill all subprocesses of pid=17446
[2025-06-03 18:54:51] 2025-06-03 15:38:00,470 | INFO     | process IDs to be killed: [17446] (in reverse order)
[2025-06-03 18:54:51] 2025-06-03 15:38:01,371 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:54:51] 2025-06-03 15:38:01,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:54:51] 2025-06-03 15:38:01,375 | INFO     | did not find any defunct processes belonging to 17446
[2025-06-03 18:54:51] 2025-06-03 15:38:01,378 | INFO     | did not find any defunct processes belonging to 17446
[2025-06-03 18:54:51] 2025-06-03 15:38:01,378 | INFO     | ready for new job
[2025-06-03 18:54:51] 2025-06-03 15:38:01,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:54:51] 2025-06-03 15:38:01,381 | INFO     | **************************************
[2025-06-03 18:54:51] 2025-06-03 15:38:01,381 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:54:51] 2025-06-03 15:38:01,381 | INFO     | **************************************
[2025-06-03 18:54:51] 2025-06-03 15:38:01,381 | INFO     | 
[2025-06-03 18:54:51] 2025-06-03 15:38:01,382 | INFO     | pilot is running in a VM
[2025-06-03 18:54:51] 2025-06-03 15:38:01,382 | INFO     | architecture information:
[2025-06-03 18:54:51] 2025-06-03 15:38:01,389 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:54:51] 2025-06-03 15:38:01,550 | INFO     | cat /etc/os-release:
[2025-06-03 18:54:51] NAME="CentOS Linux"
[2025-06-03 18:54:51] VERSION="7 (Core)"
[2025-06-03 18:54:51] ID="centos"
[2025-06-03 18:54:51] ID_LIKE="rhel fedora"
[2025-06-03 18:54:51] VERSION_ID="7"
[2025-06-03 18:54:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:54:51] ANSI_COLOR="0;31"
[2025-06-03 18:54:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:54:51] HOME_URL="https://www.centos.org/"
[2025-06-03 18:54:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:54:51] 
[2025-06-03 18:54:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:54:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:54:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:54:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:54:51] 
[2025-06-03 18:54:51] 2025-06-03 15:38:01,550 | INFO     | **************************************
[2025-06-03 18:54:51] 2025-06-03 15:38:02,054 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 18:54:51] 2025-06-03 15:38:02,273 | INFO     | sufficient remaining disk space (496997761024 B)
[2025-06-03 18:54:51] 2025-06-03 15:38:02,274 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:54:51] 2025-06-03 15:38:02,274 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:54:51] 2025-06-03 15:38:02,274 | INFO     | update_server=False
[2025-06-03 18:54:51] 2025-06-03 15:38:02,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:54:51] 2025-06-03 15:38:02,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:54:51] 2025-06-03 15:38:02,695 | INFO     | all job control threads have been joined
[2025-06-03 18:54:51] 2025-06-03 15:38:02,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:54:51] 2025-06-03 15:38:02,845 | INFO     | aborting loop
[2025-06-03 18:54:51] 2025-06-03 15:38:02,851 | INFO     | all data control threads have been joined
[2025-06-03 18:54:51] 2025-06-03 15:38:03,133 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:54:51] 2025-06-03 15:38:03,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:54:51] 2025-06-03 15:38:03,133 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:54:51] 2025-06-03 15:38:03,280 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:03,409 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:03,492 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:03,510 | INFO     | all payload control threads have been joined
[2025-06-03 18:54:51] 2025-06-03 15:38:03,702 | INFO     | [job] control thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:03,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:54:51] 2025-06-03 15:38:03,776 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:03,801 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:03,851 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:03,858 | INFO     | [data] control thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:04,247 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:04,335 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:04,346 | INFO     | [job] validate thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:04,432 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:04,517 | INFO     | [payload] control thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:04,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:54:51] 2025-06-03 15:38:04,755 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:04,778 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:08,631 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:54:51] 2025-06-03 15:38:09,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051283674944)>', '<ExcThread(monitor, started 140050620737280)>']
[2025-06-03 18:54:51] 2025-06-03 15:38:10,174 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:54:51] 2025-06-03 15:38:10,175 | INFO     | [monitor] control thread has ended
[2025-06-03 18:54:51] 2025-06-03 15:38:14,874 | INFO     | all workflow threads have been joined
[2025-06-03 18:54:51] 2025-06-03 15:38:14,875 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:54:51] 2025-06-03 15:38:14,875 | INFO     | traces error code: 0
[2025-06-03 18:54:51] 2025-06-03 15:38:14,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:54:51] 2025-06-03 15:38:15,252 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:54:51] 2025-06-03 15:38:15,354 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:54:51] 2025-06-03 15:38:15,434 [wrapper] pilotpid: 8870
[2025-06-03 18:54:51] 2025-06-03 15:38:15,512 [wrapper] Pilot exit status: 0
[2025-06-03 18:54:51] 2025-06-03 15:38:15,819 [wrapper] pandaids: 6677394570
[2025-06-03 18:54:51] 2025-06-03 15:38:16,644 [wrapper] cleanup supervisor_pilot 24446 8871
[2025-06-03 18:54:51] 2025-06-03 15:38:16,750 [wrapper] Test setup, not cleaning
[2025-06-03 18:54:51] 2025-06-03 15:38:16,878 [wrapper] apfmon messages muted
[2025-06-03 18:54:51] 2025-06-03 15:38:16,993 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:54:51] 2025-06-03 15:38:17,105 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:54:51]  *** Error codes and diagnostics ***
[2025-06-03 18:54:51]     "exeErrorCode": 0,
[2025-06-03 18:54:51]     "exeErrorDiag": "",
[2025-06-03 18:54:51]     "pilotErrorCode": 0,
[2025-06-03 18:54:51]     "pilotErrorDiag": "",
[2025-06-03 18:54:51]  *** Listing of results directory ***
[2025-06-03 18:54:51] total 391236
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:18 pilot3.tar.gz
[2025-06-03 18:54:51] -rwx------. 1 boinc boinc     37140 Jun  2 21:26 runpilot2-wrapper.sh
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:26 queuedata.json
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc       100 Jun  3 12:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:54:51] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 12:51 run_atlas
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc       105 Jun  3 12:51 job.xml
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc      6391 Jun  3 12:51 init_data.xml
[2025-06-03 18:54:51] -rw-r--r--. 2 boinc boinc 214978849 Jun  3 12:51 EVNT.45006593._000374.pool.root.1
[2025-06-03 18:54:51] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:51 start_atlas.sh
[2025-06-03 18:54:51] drwxrwx--x. 2 boinc boinc        68 Jun  3 12:51 shared
[2025-06-03 18:54:51] -rw-r--r--. 2 boinc boinc    508878 Jun  3 12:51 input.tar.gz
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc         0 Jun  3 12:51 boinc_lockfile
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc      2522 Jun  3 13:45 pandaJob.out
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc    982666 Jun  3 13:45 agis_schedconf.cvmfs.json
[2025-06-03 18:54:51] drwx------. 4 boinc boinc      4096 Jun  3 13:45 pilot3
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc 178651415 Jun  3 17:35 HITS.45006595._009332.pool.root.1
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc       531 Jun  3 17:35 boinc_task_state.xml
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc      1021 Jun  3 17:36 memory_monitor_summary.json
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc   1603667 Jun  3 17:36 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc    375852 Jun  3 17:36 log.45006595._009332.job.log.tgz.1
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc        95 Jun  3 17:37 pilot_heartbeat.json
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc      7692 Jun  3 17:37 heartbeat.json
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc      4416 Jun  3 17:38 pilotlog.txt
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc   1208787 Jun  3 17:38 log.45006595._009332.job.log.1
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc       357 Jun  3 17:38 output.list
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc       620 Jun  3 17:38 runtime_log
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc   1607680 Jun  3 17:38 result.tar.gz
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc      8659 Jun  3 17:38 runtime_log.err
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc       656 Jun  3 17:38 O24NDm2yPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGKgKDm6PQt8n.diag
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc      8192 Jun  3 18:54 boinc_mmap_file
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc        28 Jun  3 18:54 wrapper_checkpoint.txt
[2025-06-03 18:54:51] -rw-r--r--. 1 boinc boinc     20489 Jun  3 18:54 stderr.txt
[2025-06-03 18:54:51] HITS file was successfully produced:
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc 178651415 Jun  3 17:35 shared/HITS.pool.root.1
[2025-06-03 18:54:51]  *** Contents of shared directory: ***
[2025-06-03 18:54:51] total 386500
[2025-06-03 18:54:51] -rw-r--r--. 2 boinc boinc 214978849 Jun  3 12:51 ATLAS.root_0
[2025-06-03 18:54:51] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:51 start_atlas.sh
[2025-06-03 18:54:51] -rw-r--r--. 2 boinc boinc    508878 Jun  3 12:51 input.tar.gz
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc 178651415 Jun  3 17:35 HITS.pool.root.1
[2025-06-03 18:54:51] -rw-------. 1 boinc boinc   1607680 Jun  3 17:38 result.tar.gz
18:54:53 (7475): run_atlas exited; CPU time 50130.504561
18:54:53 (7475): called boinc_finish(0)

</stderr_txt>
]]>

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