Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:03:11 (2231527): wrapper (7.7.26015): starting
11:03:11 (2231527): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 11:03:11] Arguments: --nthreads 4
[2025-06-04 11:03:11] Threads: 4
[2025-06-04 11:03:11] Checking for CVMFS
[2025-06-04 11:03:11] No cvmfs_config command found, will try listing directly
[2025-06-04 11:03:11] CVMFS is ok
[2025-06-04 11:03:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:03:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:03:11] Further information can be found at the LHC@home message board.
[2025-06-04 11:03:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:03:11] Checking for apptainer binary...
[2025-06-04 11:03:11] which: no apptainer in ((null))
[2025-06-04 11:03:11] apptainer is not installed, using version from CVMFS
[2025-06-04 11:03:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:03:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-04 11:03:11] apptainer works
[2025-06-04 11:03:11] Set ATHENA_PROC_NUMBER=4
[2025-06-04 11:03:11] Set ATHENA_CORE_NUMBER=4
[2025-06-04 11:03:11] Starting ATLAS job with PandaID=6677394475
[2025-06-04 11:03:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:28:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:28:55] 2025-06-04 11:25:18,073 | INFO     | mean y: 2324850.8208955224
[2025-06-04 13:28:55] 2025-06-04 11:25:18,073 | INFO     | -- intersect: 216246433.58433706
[2025-06-04 13:28:55] 2025-06-04 11:25:18,073 | INFO     | intersect: 216246433.58433706
[2025-06-04 13:28:55] 2025-06-04 11:25:18,073 | INFO     | chi2: 0.008211043927376989
[2025-06-04 13:28:55] 2025-06-04 11:25:18,074 | INFO     | current chi2=0.008211043927376989 (change=99.48336694512496 %)
[2025-06-04 13:28:55] 2025-06-04 11:25:18,074 | INFO     | sum of square deviations: 665612480.0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,074 | INFO     | sum of deviations: 278830511.99999976
[2025-06-04 13:28:55] 2025-06-04 11:25:18,074 | INFO     | mean x: 1749032355.0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,075 | INFO     | mean y: 2324111.604651163
[2025-06-04 13:28:55] 2025-06-04 11:25:18,075 | INFO     | -- intersect: -730359847.4599614
[2025-06-04 13:28:55] 2025-06-04 11:25:18,075 | INFO     | intersect: -730359847.4599614
[2025-06-04 13:28:55] 2025-06-04 11:25:18,075 | INFO     | chi2: 0.00498629323791074
[2025-06-04 13:28:55] 2025-06-04 11:25:18,075 | INFO     | current chi2=0.00498629323791074 (change=39.273333792727534 %)
[2025-06-04 13:28:55] 2025-06-04 11:25:18,075 | INFO     | sum of square deviations: 591173875.0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,076 | INFO     | sum of deviations: 1321577291.5
[2025-06-04 13:28:55] 2025-06-04 11:25:18,076 | INFO     | mean x: 1749032507.5
[2025-06-04 13:28:55] 2025-06-04 11:25:18,076 | INFO     | mean y: 2321997.60483871
[2025-06-04 13:28:55] 2025-06-04 11:25:18,076 | INFO     | -- intersect: -3907664119.4361134
[2025-06-04 13:28:55] 2025-06-04 11:25:18,076 | INFO     | intersect: -3907664119.4361134
[2025-06-04 13:28:55] 2025-06-04 11:25:18,076 | INFO     | chi2: 0.00023578227657052007
[2025-06-04 13:28:55] 2025-06-04 11:25:18,076 | INFO     | current chi2=0.00023578227657052007 (change=95.27139168675701 %)
[2025-06-04 13:28:55] 2025-06-04 11:25:18,077 | INFO     | sum of square deviations: 522502820.0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,077 | INFO     | sum of deviations: 1003843754.9999999
[2025-06-04 13:28:55] 2025-06-04 11:25:18,077 | INFO     | mean x: 1749032660.0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,077 | INFO     | mean y: 2322701.6974789915
[2025-06-04 13:28:55] 2025-06-04 11:25:18,078 | INFO     | -- intersect: -3357956795.0371766
[2025-06-04 13:28:55] 2025-06-04 11:25:18,078 | INFO     | intersect: -3357956795.0371766
[2025-06-04 13:28:55] 2025-06-04 11:25:18,078 | INFO     | chi2: 0.00014956268859890254
[2025-06-04 13:28:55] 2025-06-04 11:25:18,078 | INFO     | current chi2=0.00014956268859890254 (change=36.56745927882758 %)
[2025-06-04 13:28:55] 2025-06-04 11:25:18,079 | INFO     | sum of square deviations: 459366752.5
[2025-06-04 13:28:55] 2025-06-04 11:25:18,080 | INFO     | sum of deviations: 772802595.0000002
[2025-06-04 13:28:55] 2025-06-04 11:25:18,080 | INFO     | mean x: 1749032812.5
[2025-06-04 13:28:55] 2025-06-04 11:25:18,080 | INFO     | mean y: 2323259.9122807016
[2025-06-04 13:28:55] 2025-06-04 11:25:18,080 | INFO     | -- intersect: -2940112362.35263
[2025-06-04 13:28:55] 2025-06-04 11:25:18,081 | INFO     | intersect: -2940112362.35263
[2025-06-04 13:28:55] 2025-06-04 11:25:18,081 | INFO     | chi2: 0.00010905831409990757
[2025-06-04 13:28:55] 2025-06-04 11:25:18,082 | INFO     | current chi2=0.00010905831409990757 (change=27.081871072550502 %)
[2025-06-04 13:28:55] 2025-06-04 11:25:18,082 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,083 | INFO     | sum of deviations: 665678909.0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,083 | INFO     | mean x: 1749032965.0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,083 | INFO     | mean y: 2323540.779816514
[2025-06-04 13:28:55] 2025-06-04 11:25:18,084 | INFO     | -- intersect: -2897298749.2630525
[2025-06-04 13:28:55] 2025-06-04 11:25:18,084 | INFO     | intersect: -2897298749.2630525
[2025-06-04 13:28:55] 2025-06-04 11:25:18,084 | INFO     | chi2: 0.00010429474253336639
[2025-06-04 13:28:55] 2025-06-04 11:25:18,084 | INFO     | current chi2=0.00010429474253336639 (change=4.367912346579372 %)
[2025-06-04 13:28:55] 2025-06-04 11:25:18,084 | INFO     | left removable region: 60
[2025-06-04 13:28:55] 2025-06-04 11:25:18,085 | INFO     | sum of square deviations: 120605052.0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,085 | INFO     | sum of deviations: 123019127.0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,085 | INFO     | mean x: 1749033697.0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,086 | INFO     | mean y: 2325080.0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,086 | INFO     | -- intersect: -1781717917.6227076
[2025-06-04 13:28:55] 2025-06-04 11:25:18,086 | INFO     | intersect: -1781717917.6227076
[2025-06-04 13:28:55] 2025-06-04 11:25:18,086 | INFO     | chi2: 8.361475281598936e-05
[2025-06-04 13:28:55] 2025-06-04 11:25:18,086 | INFO     | -- intersect: -1781717917.6227076
[2025-06-04 13:28:55] 2025-06-04 11:25:18,086 | INFO     | current memory leak: 1.02 B/s (using 73 data points, chi2=0.00)
[2025-06-04 13:28:55] 2025-06-04 11:25:18,087 | INFO     | ..............................
[2025-06-04 13:28:55] 2025-06-04 11:25:18,087 | INFO     | . Timing measurements:
[2025-06-04 13:28:55] 2025-06-04 11:25:18,087 | INFO     | . get job = 0 s
[2025-06-04 13:28:55] 2025-06-04 11:25:18,087 | INFO     | . initial setup = 1 s
[2025-06-04 13:28:55] 2025-06-04 11:25:18,087 | INFO     | . payload setup = 10 s
[2025-06-04 13:28:55] 2025-06-04 11:25:18,087 | INFO     | . stage-in = 0 s
[2025-06-04 13:28:55] 2025-06-04 11:25:18,087 | INFO     | . payload execution = 8469 s
[2025-06-04 13:28:55] 2025-06-04 11:25:18,087 | INFO     | . stage-out = 0 s
[2025-06-04 13:28:55] 2025-06-04 11:25:18,087 | INFO     | . log creation = 0 s
[2025-06-04 13:28:55] 2025-06-04 11:25:18,087 | INFO     | ..............................
[2025-06-04 13:28:55] 2025-06-04 11:25:18,328 | INFO     | PID=2235415 has CPU usage=20.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 13:28:55] 2025-06-04 11:25:18,329 | INFO     | .. there are 14 such processes running
[2025-06-04 13:28:55] 2025-06-04 11:25:18,432 | INFO     | 
[2025-06-04 13:28:55] 2025-06-04 11:25:18,432 | INFO     | job summary report
[2025-06-04 13:28:55] 2025-06-04 11:25:18,432 | INFO     | --------------------------------------------------
[2025-06-04 13:28:55] 2025-06-04 11:25:18,433 | INFO     | PanDA job id: 6677394475
[2025-06-04 13:28:55] 2025-06-04 11:25:18,433 | INFO     | task id: 45006595
[2025-06-04 13:28:55] 2025-06-04 11:25:18,433 | INFO     | errors: (none)
[2025-06-04 13:28:55] 2025-06-04 11:25:18,433 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:28:55] 2025-06-04 11:25:18,433 | INFO     | pilot state: finished 
[2025-06-04 13:28:55] 2025-06-04 11:25:18,433 | INFO     | transexitcode: 0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,433 | INFO     | exeerrorcode: 0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,433 | INFO     | exeerrordiag: 
[2025-06-04 13:28:55] 2025-06-04 11:25:18,433 | INFO     | exitcode: 0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,433 | INFO     | exitmsg: OK
[2025-06-04 13:28:55] 2025-06-04 11:25:18,433 | INFO     | cpuconsumptiontime: 32000 s
[2025-06-04 13:28:55] 2025-06-04 11:25:18,433 | INFO     | nevents: 400
[2025-06-04 13:28:55] 2025-06-04 11:25:18,434 | INFO     | neventsw: 0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,434 | INFO     | pid: 2242813
[2025-06-04 13:28:55] 2025-06-04 11:25:18,434 | INFO     | pgrp: 2242813
[2025-06-04 13:28:55] 2025-06-04 11:25:18,434 | INFO     | corecount: 4
[2025-06-04 13:28:55] 2025-06-04 11:25:18,434 | INFO     | event service: False
[2025-06-04 13:28:55] 2025-06-04 11:25:18,434 | INFO     | sizes: {0: 2404350, 1: 2405218, 8: 2405424, 12: 2405452, 8484: 2433576, 8485: 2442541, 8486: 2442725, 8495: 2442895}
[2025-06-04 13:28:55] 2025-06-04 11:25:18,434 | INFO     | --------------------------------------------------
[2025-06-04 13:28:55] 2025-06-04 11:25:18,434 | INFO     | 
[2025-06-04 13:28:55] 2025-06-04 11:25:18,434 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-06-04 13:28:55] 2025-06-04 11:25:18,465 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,465 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,465 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,465 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:28:55] 2025-06-04 11:25:18,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,470 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:28:55] 2025-06-04 11:25:18,470 | INFO     | job 6677394475 has completed (purged errors)
[2025-06-04 13:28:55] 2025-06-04 11:25:18,470 | INFO     | overall cleanup function is called
[2025-06-04 13:28:55] 2025-06-04 11:25:19,480 | INFO     | --- collectZombieJob: --- 10, [2242813]
[2025-06-04 13:28:55] 2025-06-04 11:25:19,480 | INFO     | zombie collector waiting for pid 2242813
[2025-06-04 13:28:55] 2025-06-04 11:25:19,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:28:55] 2025-06-04 11:25:19,480 | INFO     | collected zombie processes
[2025-06-04 13:28:55] 2025-06-04 11:25:19,480 | INFO     | will attempt to kill all subprocesses of pid=2242813
[2025-06-04 13:28:55] 2025-06-04 11:25:20,187 | INFO     | process IDs to be killed: [2242813] (in reverse order)
[2025-06-04 13:28:55] 2025-06-04 11:25:20,434 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:28:55] 2025-06-04 11:25:20,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:28:55] 2025-06-04 11:25:20,462 | INFO     | did not find any defunct processes belonging to 2242813
[2025-06-04 13:28:55] 2025-06-04 11:25:20,484 | INFO     | did not find any defunct processes belonging to 2242813
[2025-06-04 13:28:55] 2025-06-04 11:25:20,484 | INFO     | ready for new job
[2025-06-04 13:28:55] 2025-06-04 11:25:20,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:28:55] 2025-06-04 11:25:20,486 | INFO     | **************************************
[2025-06-04 13:28:55] 2025-06-04 11:25:20,486 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:28:55] 2025-06-04 11:25:20,486 | INFO     | **************************************
[2025-06-04 13:28:55] 2025-06-04 11:25:20,487 | INFO     | 
[2025-06-04 13:28:55] 2025-06-04 11:25:20,495 | INFO     | architecture information:
[2025-06-04 13:28:55] 2025-06-04 11:25:20,495 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:28:55] 2025-06-04 11:25:20,513 | INFO     | cat /etc/os-release:
[2025-06-04 13:28:55] NAME="CentOS Linux"
[2025-06-04 13:28:55] VERSION="7 (Core)"
[2025-06-04 13:28:55] ID="centos"
[2025-06-04 13:28:55] ID_LIKE="rhel fedora"
[2025-06-04 13:28:55] VERSION_ID="7"
[2025-06-04 13:28:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:28:55] ANSI_COLOR="0;31"
[2025-06-04 13:28:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:28:55] HOME_URL="https://www.centos.org/"
[2025-06-04 13:28:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:28:55] 
[2025-06-04 13:28:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:28:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:28:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:28:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:28:55] 
[2025-06-04 13:28:55] 2025-06-04 11:25:20,513 | INFO     | **************************************
[2025-06-04 13:28:55] 2025-06-04 11:25:21,016 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-06-04 13:28:55] 2025-06-04 11:25:21,040 | INFO     | sufficient remaining disk space (3254805069824 B)
[2025-06-04 13:28:55] 2025-06-04 11:25:21,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:28:55] 2025-06-04 11:25:21,040 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:28:55] 2025-06-04 11:25:21,041 | INFO     | update_server=False
[2025-06-04 13:28:55] 2025-06-04 11:25:21,041 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:28:55] 2025-06-04 11:25:21,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:28:55] 2025-06-04 11:25:21,042 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:28:55] 2025-06-04 11:25:21,042 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:28:55] 2025-06-04 11:25:21,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:28:55] 2025-06-04 11:25:21,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:28:55] 2025-06-04 11:25:21,070 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:28:55] 2025-06-04 11:25:21,070 | INFO     | aborting loop
[2025-06-04 13:28:55] 2025-06-04 11:25:21,266 | INFO     | all data control threads have been joined
[2025-06-04 13:28:55] 2025-06-04 11:25:22,043 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:22,075 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:22,188 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:22,271 | INFO     | [data] control thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:22,414 | INFO     | all payload control threads have been joined
[2025-06-04 13:28:55] 2025-06-04 11:25:22,473 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:22,479 | INFO     | [job] validate thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:22,688 | INFO     | all job control threads have been joined
[2025-06-04 13:28:55] 2025-06-04 11:25:22,729 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:22,988 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:22,988 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:23,006 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:23,047 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:23,187 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:28:55] 2025-06-04 11:25:23,419 | INFO     | [payload] control thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:23,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:23,693 | INFO     | [job] control thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:23,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:28:55] 2025-06-04 11:25:24,192 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:27,893 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:28:55] 2025-06-04 11:25:29,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22688344766272)>', '<ExcThread(monitor, started 22688105985792)>']
[2025-06-04 13:28:55] 2025-06-04 11:25:30,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:28:55] 2025-06-04 11:25:30,087 | INFO     | [monitor] control thread has ended
[2025-06-04 13:28:55] 2025-06-04 11:25:34,794 | INFO     | all workflow threads have been joined
[2025-06-04 13:28:55] 2025-06-04 11:25:34,794 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:28:55] 2025-06-04 11:25:34,794 | INFO     | traces error code: 0
[2025-06-04 13:28:55] 2025-06-04 11:25:34,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:28:55] 2025-06-04 11:25:34,935 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:28:55] 2025-06-04 11:25:34,939 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:28:55] 2025-06-04 11:25:34,943 [wrapper] pilotpid: 2235415
[2025-06-04 13:28:55] 2025-06-04 11:25:34,947 [wrapper] Pilot exit status: 0
[2025-06-04 13:28:55] 2025-06-04 11:25:34,963 [wrapper] pandaids: 6677394475
[2025-06-04 13:28:55] 2025-06-04 11:25:35,131 [wrapper] cleanup supervisor_pilot 2678076 2235416
[2025-06-04 13:28:55] 2025-06-04 11:25:35,136 [wrapper] Test setup, not cleaning
[2025-06-04 13:28:55] 2025-06-04 11:25:35,140 [wrapper] apfmon messages muted
[2025-06-04 13:28:55] 2025-06-04 11:25:35,144 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:28:55] 2025-06-04 11:25:35,147 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:28:55]  *** Error codes and diagnostics ***
[2025-06-04 13:28:55]     "exeErrorCode": 0,
[2025-06-04 13:28:55]     "exeErrorDiag": "",
[2025-06-04 13:28:55]     "pilotErrorCode": 0,
[2025-06-04 13:28:55]     "pilotErrorDiag": "",
[2025-06-04 13:28:55]  *** Listing of results directory ***
[2025-06-04 13:28:55] total 386732
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc    495897 Jun  2 21:18 pilot3.tar.gz
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc      5111 Jun  2 21:24 queuedata.json
[2025-06-04 13:28:55] -rwx------ 1 boinc boinc     37140 Jun  2 21:24 runpilot2-wrapper.sh
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:28:55] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:03 run_atlas
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:03 job.xml
[2025-06-04 13:28:55] -rw-r--r-- 2 boinc boinc 213956436 Jun  4 11:03 EVNT.45006593._000370.pool.root.1
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc      6689 Jun  4 11:03 init_data.xml
[2025-06-04 13:28:55] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:03 start_atlas.sh
[2025-06-04 13:28:55] drwxrwx--x 2 boinc boinc      4096 Jun  4 11:03 shared
[2025-06-04 13:28:55] -rw-r--r-- 2 boinc boinc    508881 Jun  4 11:03 input.tar.gz
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:03 boinc_lockfile
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc      2522 Jun  4 11:03 pandaJob.out
[2025-06-04 13:28:55] -rw------- 1 boinc boinc    986774 Jun  4 11:03 agis_schedconf.cvmfs.json
[2025-06-04 13:28:55] -rw------- 1 boinc boinc   1603667 Jun  4 11:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:28:55] drwx------ 4 boinc boinc      4096 Jun  4 11:03 pilot3
[2025-06-04 13:28:55] -rw------- 1 boinc boinc 176053124 Jun  4 13:24 HITS.45006595._009237.pool.root.1
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc       529 Jun  4 13:24 boinc_task_state.xml
[2025-06-04 13:28:55] -rw------- 1 boinc boinc        95 Jun  4 13:24 pilot_heartbeat.json
[2025-06-04 13:28:55] -rw------- 1 boinc boinc      1027 Jun  4 13:25 memory_monitor_summary.json
[2025-06-04 13:28:55] -rw------- 1 boinc boinc    276481 Jun  4 13:25 log.45006595._009237.job.log.tgz.1
[2025-06-04 13:28:55] -rw------- 1 boinc boinc      7692 Jun  4 13:25 heartbeat.json
[2025-06-04 13:28:55] -rw------- 1 boinc boinc      4488 Jun  4 13:25 pilotlog.txt
[2025-06-04 13:28:55] -rw------- 1 boinc boinc    805045 Jun  4 13:25 log.45006595._009237.job.log.1
[2025-06-04 13:28:55] -rw------- 1 boinc boinc       357 Jun  4 13:25 output.list
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc       620 Jun  4 13:25 runtime_log
[2025-06-04 13:28:55] -rw------- 1 boinc boinc   1105920 Jun  4 13:25 result.tar.gz
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc      9040 Jun  4 13:25 runtime_log.err
[2025-06-04 13:28:55] -rw------- 1 boinc boinc       663 Jun  4 13:25 ULbKDm9wPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKJgKDmM9dgxn.diag
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc        26 Jun  4 13:28 wrapper_checkpoint.txt
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc      8192 Jun  4 13:28 boinc_mmap_file
[2025-06-04 13:28:55] -rw-r--r-- 1 boinc boinc     20739 Jun  4 13:28 stderr.txt
[2025-06-04 13:28:55] HITS file was successfully produced:
[2025-06-04 13:28:55] -rw------- 1 boinc boinc 176053124 Jun  4 13:24 shared/HITS.pool.root.1
[2025-06-04 13:28:55]  *** Contents of shared directory: ***
[2025-06-04 13:28:55] total 382476
[2025-06-04 13:28:55] -rw-r--r-- 2 boinc boinc 213956436 Jun  4 11:03 ATLAS.root_0
[2025-06-04 13:28:55] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:03 start_atlas.sh
[2025-06-04 13:28:55] -rw-r--r-- 2 boinc boinc    508881 Jun  4 11:03 input.tar.gz
[2025-06-04 13:28:55] -rw------- 1 boinc boinc 176053124 Jun  4 13:24 HITS.pool.root.1
[2025-06-04 13:28:55] -rw------- 1 boinc boinc   1105920 Jun  4 13:25 result.tar.gz
13:28:56 (2231527): run_atlas exited; CPU time 32442.931111
13:28:56 (2231527): called boinc_finish(0)

</stderr_txt>
]]>

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