Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:38:05 (5105): wrapper (7.7.26015): starting
06:38:05 (5105): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:38:05] Arguments: --nthreads 8
[2025-06-03 06:38:05] Threads: 8
[2025-06-03 06:38:05] Checking for CVMFS
[2025-06-03 06:38:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:38:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:38:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:38:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:38:06] 2.11.2.0 2191 31285 92344 146729 2 154 22937722 25165825 3474 130560 0 15652793 99.787 18883691 2300 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 06:38:06] CVMFS is ok
[2025-06-03 06:38:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:38:06] Checking for apptainer binary...
[2025-06-03 06:38:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:38:06] Running /usr/bin/apptainer --version
[2025-06-03 06:38:06] apptainer version 1.3.2-1.el7
[2025-06-03 06:38:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:38:08] cg-vwn409.simple-grid.lan
[2025-06-03 06:38:08] apptainer works
[2025-06-03 06:38:08] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:38:08] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:38:08] Starting ATLAS job with PandaID=6677395008
[2025-06-03 06:38:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:48:44]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:48:44] 2025-06-03 08:22:08,376 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:48:44] 2025-06-03 08:22:08,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:48:44] 2025-06-03 08:22:08,376 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:48:44] 2025-06-03 08:22:08,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:48:44] 2025-06-03 08:22:08,381 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:48:44] 2025-06-03 08:22:08,382 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,383 | INFO     | sum of deviations: -54505200314.0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,384 | INFO     | mean x: 1748932186.0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,384 | INFO     | mean y: 2572817.7465437786
[2025-06-03 12:48:44] 2025-06-03 08:22:08,384 | INFO     | -- intersect: 30088438185.98683
[2025-06-03 12:48:44] 2025-06-03 08:22:08,384 | INFO     | intersect: 30088438185.98683
[2025-06-03 12:48:44] 2025-06-03 08:22:08,384 | INFO     | chi2: 3.0463643571062766
[2025-06-03 12:48:44] 2025-06-03 08:22:08,385 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,390 | INFO     | sum of deviations: -36369577379.99999
[2025-06-03 12:48:44] 2025-06-03 08:22:08,391 | INFO     | mean x: 1748932033.5
[2025-06-03 12:48:44] 2025-06-03 08:22:08,391 | INFO     | mean y: 2585541.962264151
[2025-06-03 12:48:44] 2025-06-03 08:22:08,391 | INFO     | -- intersect: 21532130125.799107
[2025-06-03 12:48:44] 2025-06-03 08:22:08,391 | INFO     | intersect: 21532130125.799107
[2025-06-03 12:48:44] 2025-06-03 08:22:08,392 | INFO     | chi2: 2.206454191844259
[2025-06-03 12:48:44] 2025-06-03 08:22:08,392 | INFO     | current chi2=2.206454191844259 (change=27.570903109562483 %)
[2025-06-03 12:48:44] 2025-06-03 08:22:08,392 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,394 | INFO     | sum of deviations: -33451547342.0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,394 | INFO     | mean x: 1748931881.0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,394 | INFO     | mean y: 2587722.1014492754
[2025-06-03 12:48:44] 2025-06-03 08:22:08,394 | INFO     | -- intersect: 21274659077.664417
[2025-06-03 12:48:44] 2025-06-03 08:22:08,395 | INFO     | intersect: 21274659077.664417
[2025-06-03 12:48:44] 2025-06-03 08:22:08,395 | INFO     | chi2: 2.2072319706978596
[2025-06-03 12:48:44] 2025-06-03 08:22:08,395 | INFO     | current chi2=2.2072319706978596 (change=-0.0352501700001497 %)
[2025-06-03 12:48:44] 2025-06-03 08:22:08,395 | INFO     | right removable region: 206
[2025-06-03 12:48:44] 2025-06-03 08:22:08,396 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,397 | INFO     | sum of deviations: -97642188942.00002
[2025-06-03 12:48:44] 2025-06-03 08:22:08,398 | INFO     | mean x: 1748932338.5
[2025-06-03 12:48:44] 2025-06-03 08:22:08,398 | INFO     | mean y: 2603319.669811321
[2025-06-03 12:48:44] 2025-06-03 08:22:08,398 | INFO     | -- intersect: 57803446170.59511
[2025-06-03 12:48:44] 2025-06-03 08:22:08,398 | INFO     | intersect: 57803446170.59511
[2025-06-03 12:48:44] 2025-06-03 08:22:08,398 | INFO     | chi2: 1.1230788444469977
[2025-06-03 12:48:44] 2025-06-03 08:22:08,398 | INFO     | current chi2=1.1230788444469977 (change=63.13379777349405 %)
[2025-06-03 12:48:44] 2025-06-03 08:22:08,399 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,400 | INFO     | sum of deviations: -102004502987.0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,401 | INFO     | mean x: 1748932491.0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,401 | INFO     | mean y: 2606553.8695652173
[2025-06-03 12:48:44] 2025-06-03 08:22:08,401 | INFO     | -- intersect: 64868001291.90209
[2025-06-03 12:48:44] 2025-06-03 08:22:08,401 | INFO     | intersect: 64868001291.90209
[2025-06-03 12:48:44] 2025-06-03 08:22:08,401 | INFO     | chi2: 1.0433871770844494
[2025-06-03 12:48:44] 2025-06-03 08:22:08,401 | INFO     | current chi2=1.0433871770844494 (change=7.095821255700738 %)
[2025-06-03 12:48:44] 2025-06-03 08:22:08,401 | INFO     | left removable region: 20
[2025-06-03 12:48:44] 2025-06-03 08:22:08,402 | INFO     | sum of square deviations: 1995283922.5
[2025-06-03 12:48:44] 2025-06-03 08:22:08,403 | INFO     | sum of deviations: -72694919145.99998
[2025-06-03 12:48:44] 2025-06-03 08:22:08,403 | INFO     | mean x: 1748932460.5
[2025-06-03 12:48:44] 2025-06-03 08:22:08,403 | INFO     | mean y: 2618897.053763441
[2025-06-03 12:48:44] 2025-06-03 08:22:08,403 | INFO     | -- intersect: 63722123862.82503
[2025-06-03 12:48:44] 2025-06-03 08:22:08,403 | INFO     | intersect: 63722123862.82503
[2025-06-03 12:48:44] 2025-06-03 08:22:08,404 | INFO     | chi2: 0.15181606546706347
[2025-06-03 12:48:44] 2025-06-03 08:22:08,404 | INFO     | -- intersect: 63722123862.82503
[2025-06-03 12:48:44] 2025-06-03 08:22:08,404 | INFO     | current memory leak: -36.43 B/s (using 186 data points, chi2=0.15)
[2025-06-03 12:48:44] 2025-06-03 08:22:08,405 | INFO     | ..............................
[2025-06-03 12:48:44] 2025-06-03 08:22:08,405 | INFO     | . Timing measurements:
[2025-06-03 12:48:44] 2025-06-03 08:22:08,405 | INFO     | . get job = 0 s
[2025-06-03 12:48:44] 2025-06-03 08:22:08,405 | INFO     | . initial setup = 2 s
[2025-06-03 12:48:44] 2025-06-03 08:22:08,405 | INFO     | . payload setup = 20 s
[2025-06-03 12:48:44] 2025-06-03 08:22:08,405 | INFO     | . stage-in = 0 s
[2025-06-03 12:48:44] 2025-06-03 08:22:08,405 | INFO     | . payload execution = 13256 s
[2025-06-03 12:48:44] 2025-06-03 08:22:08,405 | INFO     | . stage-out = 3 s
[2025-06-03 12:48:44] 2025-06-03 08:22:08,406 | INFO     | . log creation = 1 s
[2025-06-03 12:48:44] 2025-06-03 08:22:08,406 | INFO     | ..............................
[2025-06-03 12:48:44] 2025-06-03 08:22:08,926 | INFO     | 
[2025-06-03 12:48:44] 2025-06-03 08:22:08,926 | INFO     | job summary report
[2025-06-03 12:48:44] 2025-06-03 08:22:08,926 | INFO     | --------------------------------------------------
[2025-06-03 12:48:44] 2025-06-03 08:22:08,926 | INFO     | PanDA job id: 6677395008
[2025-06-03 12:48:44] 2025-06-03 08:22:08,926 | INFO     | task id: 45006595
[2025-06-03 12:48:44] 2025-06-03 08:22:08,927 | INFO     | errors: (none)
[2025-06-03 12:48:44] 2025-06-03 08:22:08,927 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:48:44] 2025-06-03 08:22:08,927 | INFO     | pilot state: finished 
[2025-06-03 12:48:44] 2025-06-03 08:22:08,927 | INFO     | transexitcode: 0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,927 | INFO     | exeerrorcode: 0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,927 | INFO     | exeerrordiag: 
[2025-06-03 12:48:44] 2025-06-03 08:22:08,927 | INFO     | exitcode: 0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,927 | INFO     | exitmsg: OK
[2025-06-03 12:48:44] 2025-06-03 08:22:08,927 | INFO     | cpuconsumptiontime: 49464 s
[2025-06-03 12:48:44] 2025-06-03 08:22:08,928 | INFO     | nevents: 400
[2025-06-03 12:48:44] 2025-06-03 08:22:08,928 | INFO     | neventsw: 0
[2025-06-03 12:48:44] 2025-06-03 08:22:08,928 | INFO     | pid: 1898
[2025-06-03 12:48:44] 2025-06-03 08:22:08,928 | INFO     | pgrp: 1898
[2025-06-03 12:48:44] 2025-06-03 08:22:08,928 | INFO     | corecount: 8
[2025-06-03 12:48:44] 2025-06-03 08:22:08,928 | INFO     | event service: False
[2025-06-03 12:48:44] 2025-06-03 08:22:08,928 | INFO     | sizes: {0: 2404348, 1: 2405204, 2: 2405204, 12: 2405232, 13: 2405466, 23: 2405522, 13280: 2435225, 13281: 2435224, 13286: 2444221, 13287: 2444277, 13378: 2444447}
[2025-06-03 12:48:44] 2025-06-03 08:22:08,928 | INFO     | --------------------------------------------------
[2025-06-03 12:48:44] 2025-06-03 08:22:08,928 | INFO     | 
[2025-06-03 12:48:44] 2025-06-03 08:22:08,928 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 12:48:44] 2025-06-03 08:22:09,222 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,223 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,223 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,223 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,223 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,223 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,223 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,223 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,223 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,224 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,224 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,224 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,224 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,224 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,224 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,224 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:48:44] 2025-06-03 08:22:09,224 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,225 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:48:44] 2025-06-03 08:22:09,225 | INFO     | job 6677395008 has completed (purged errors)
[2025-06-03 12:48:44] 2025-06-03 08:22:09,225 | INFO     | overall cleanup function is called
[2025-06-03 12:48:44] 2025-06-03 08:22:10,234 | INFO     | --- collectZombieJob: --- 10, [1898]
[2025-06-03 12:48:44] 2025-06-03 08:22:10,234 | INFO     | zombie collector waiting for pid 1898
[2025-06-03 12:48:44] 2025-06-03 08:22:10,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:48:44] 2025-06-03 08:22:10,234 | INFO     | collected zombie processes
[2025-06-03 12:48:44] 2025-06-03 08:22:10,235 | INFO     | will attempt to kill all subprocesses of pid=1898
[2025-06-03 12:48:44] 2025-06-03 08:22:10,377 | INFO     | 13427s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 12:48:44] 2025-06-03 08:22:10,385 | INFO     | process IDs to be killed: [1898] (in reverse order)
[2025-06-03 12:48:44] 2025-06-03 08:22:11,286 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:48:44] 2025-06-03 08:22:11,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:48:44] 2025-06-03 08:22:11,290 | INFO     | did not find any defunct processes belonging to 1898
[2025-06-03 12:48:44] 2025-06-03 08:22:11,293 | INFO     | did not find any defunct processes belonging to 1898
[2025-06-03 12:48:44] 2025-06-03 08:22:11,293 | INFO     | ready for new job
[2025-06-03 12:48:44] 2025-06-03 08:22:11,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:48:44] 2025-06-03 08:22:11,295 | INFO     | **************************************
[2025-06-03 12:48:44] 2025-06-03 08:22:11,296 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:48:44] 2025-06-03 08:22:11,296 | INFO     | **************************************
[2025-06-03 12:48:44] 2025-06-03 08:22:11,296 | INFO     | 
[2025-06-03 12:48:44] 2025-06-03 08:22:11,297 | INFO     | pilot is running in a VM
[2025-06-03 12:48:44] 2025-06-03 08:22:11,297 | INFO     | architecture information:
[2025-06-03 12:48:44] 2025-06-03 08:22:11,304 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:48:44] 2025-06-03 08:22:11,511 | INFO     | cat /etc/os-release:
[2025-06-03 12:48:44] NAME="CentOS Linux"
[2025-06-03 12:48:44] VERSION="7 (Core)"
[2025-06-03 12:48:44] ID="centos"
[2025-06-03 12:48:44] ID_LIKE="rhel fedora"
[2025-06-03 12:48:44] VERSION_ID="7"
[2025-06-03 12:48:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:48:44] ANSI_COLOR="0;31"
[2025-06-03 12:48:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:48:44] HOME_URL="https://www.centos.org/"
[2025-06-03 12:48:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:48:44] 
[2025-06-03 12:48:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:48:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:48:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:48:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:48:44] 
[2025-06-03 12:48:44] 2025-06-03 08:22:11,512 | INFO     | **************************************
[2025-06-03 12:48:44] 2025-06-03 08:22:12,015 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 12:48:44] 2025-06-03 08:22:12,229 | INFO     | sufficient remaining disk space (496874029056 B)
[2025-06-03 12:48:44] 2025-06-03 08:22:12,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:48:44] 2025-06-03 08:22:12,230 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:48:44] 2025-06-03 08:22:12,230 | INFO     | update_server=False
[2025-06-03 12:48:44] 2025-06-03 08:22:12,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:48:44] 2025-06-03 08:22:12,230 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:48:44] 2025-06-03 08:22:12,231 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:48:44] 2025-06-03 08:22:12,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:48:44] 2025-06-03 08:22:12,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:48:44] 2025-06-03 08:22:12,233 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:48:44] 2025-06-03 08:22:12,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:48:44] 2025-06-03 08:22:12,239 | INFO     | aborting loop
[2025-06-03 12:48:44] 2025-06-03 08:22:12,248 | INFO     | all data control threads have been joined
[2025-06-03 12:48:44] 2025-06-03 08:22:12,366 | INFO     | all payload control threads have been joined
[2025-06-03 12:48:44] 2025-06-03 08:22:13,236 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:13,245 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:13,254 | INFO     | [data] control thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:13,372 | INFO     | [payload] control thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:13,394 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:13,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:48:44] 2025-06-03 08:22:13,583 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:13,600 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:13,651 | INFO     | all job control threads have been joined
[2025-06-03 12:48:44] 2025-06-03 08:22:13,652 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:13,755 | INFO     | [job] validate thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:13,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:48:44] 2025-06-03 08:22:14,106 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:14,240 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:14,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:14,555 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:14,657 | INFO     | [job] control thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:14,707 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:17,911 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:48:44] 2025-06-03 08:22:18,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837098215232)>', '<ExcThread(monitor, started 139836207916800)>']
[2025-06-03 12:48:44] 2025-06-03 08:22:18,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:48:44] 2025-06-03 08:22:18,265 | INFO     | [monitor] control thread has ended
[2025-06-03 12:48:44] 2025-06-03 08:22:23,034 | INFO     | all workflow threads have been joined
[2025-06-03 12:48:44] 2025-06-03 08:22:23,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:48:44] 2025-06-03 08:22:23,034 | INFO     | traces error code: 0
[2025-06-03 12:48:44] 2025-06-03 08:22:23,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:48:44] 2025-06-03 08:22:23,418 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:48:44] 2025-06-03 08:22:23,466 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:48:44] 2025-06-03 08:22:23,489 [wrapper] pilotpid: 8772
[2025-06-03 12:48:44] 2025-06-03 08:22:23,551 [wrapper] Pilot exit status: 0
[2025-06-03 12:48:44] 2025-06-03 08:22:23,854 [wrapper] pandaids: 6677395008
[2025-06-03 12:48:44] 2025-06-03 08:22:24,627 [wrapper] cleanup supervisor_pilot 22321 8773
[2025-06-03 12:48:44] 2025-06-03 08:22:24,698 [wrapper] Test setup, not cleaning
[2025-06-03 12:48:44] 2025-06-03 08:22:24,771 [wrapper] apfmon messages muted
[2025-06-03 12:48:44] 2025-06-03 08:22:24,822 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:48:44] 2025-06-03 08:22:24,916 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:48:44]  *** Error codes and diagnostics ***
[2025-06-03 12:48:44]     "exeErrorCode": 0,
[2025-06-03 12:48:44]     "exeErrorDiag": "",
[2025-06-03 12:48:44]     "pilotErrorCode": 0,
[2025-06-03 12:48:44]     "pilotErrorDiag": "",
[2025-06-03 12:48:44]  *** Listing of results directory ***
[2025-06-03 12:48:44] total 387140
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:34 queuedata.json
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:34 pilot3.tar.gz
[2025-06-03 12:48:44] -rwx------. 1 boinc boinc     37140 Jun  2 21:35 runpilot2-wrapper.sh
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc       100 Jun  3 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:48:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 06:38 run_atlas
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc       105 Jun  3 06:38 job.xml
[2025-06-03 12:48:44] -rw-r--r--. 2 boinc boinc 214583279 Jun  3 06:38 EVNT.45006593._000383.pool.root.1
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc      6392 Jun  3 06:38 init_data.xml
[2025-06-03 12:48:44] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:38 start_atlas.sh
[2025-06-03 12:48:44] drwxrwx--x. 2 boinc boinc        68 Jun  3 06:38 shared
[2025-06-03 12:48:44] -rw-r--r--. 2 boinc boinc    508871 Jun  3 06:38 input.tar.gz
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc         0 Jun  3 06:38 boinc_lockfile
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc      2521 Jun  3 06:38 pandaJob.out
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc    988073 Jun  3 06:38 agis_schedconf.cvmfs.json
[2025-06-03 12:48:44] drwx------. 4 boinc boinc      4096 Jun  3 06:38 pilot3
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc 174967635 Jun  3 10:19 HITS.45006595._009554.pool.root.1
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc       531 Jun  3 10:19 boinc_task_state.xml
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc      1017 Jun  3 10:20 memory_monitor_summary.json
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc   1603667 Jun  3 10:20 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc    365849 Jun  3 10:20 log.45006595._009554.job.log.tgz.1
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc        95 Jun  3 10:21 pilot_heartbeat.json
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc      7690 Jun  3 10:22 heartbeat.json
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc      4539 Jun  3 10:22 pilotlog.txt
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc   1162308 Jun  3 10:22 log.45006595._009554.job.log.1
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc       357 Jun  3 10:22 output.list
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc       620 Jun  3 10:22 runtime_log
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc   1546240 Jun  3 10:22 result.tar.gz
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc      8659 Jun  3 10:22 runtime_log.err
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc       656 Jun  3 10:22 9ECMDmC7Pg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrLgKDm2CkS3n.diag
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc      8192 Jun  3 12:48 boinc_mmap_file
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc        28 Jun  3 12:48 wrapper_checkpoint.txt
[2025-06-03 12:48:44] -rw-r--r--. 1 boinc boinc     20533 Jun  3 12:48 stderr.txt
[2025-06-03 12:48:44] HITS file was successfully produced:
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc 174967635 Jun  3 10:19 shared/HITS.pool.root.1
[2025-06-03 12:48:44]  *** Contents of shared directory: ***
[2025-06-03 12:48:44] total 382452
[2025-06-03 12:48:44] -rw-r--r--. 2 boinc boinc 214583279 Jun  3 06:38 ATLAS.root_0
[2025-06-03 12:48:44] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:38 start_atlas.sh
[2025-06-03 12:48:44] -rw-r--r--. 2 boinc boinc    508871 Jun  3 06:38 input.tar.gz
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc 174967635 Jun  3 10:19 HITS.pool.root.1
[2025-06-03 12:48:44] -rw-------. 1 boinc boinc   1546240 Jun  3 10:22 result.tar.gz
12:48:46 (5105): run_atlas exited; CPU time 49625.887560
12:48:46 (5105): called boinc_finish(0)

</stderr_txt>
]]>

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