Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:20:02 (30964): wrapper (7.7.26015): starting
09:20:02 (30964): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:20:02] Arguments: --nthreads 8
[2025-06-03 09:20:02] Threads: 8
[2025-06-03 09:20:02] Checking for CVMFS
[2025-06-03 09:20:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:20:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:20:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:20:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:20:04] 2.11.2.0 13500 31572 88756 146731 2 63 14538074 25165824 4633 130560 0 15572754 99.849 17588513 2583 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 09:20:04] CVMFS is ok
[2025-06-03 09:20:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:20:04] Checking for apptainer binary...
[2025-06-03 09:20:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:20:04] Running /usr/bin/apptainer --version
[2025-06-03 09:20:04] apptainer version 1.3.2-1.el7
[2025-06-03 09:20:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:39:36] cg-vwn363.simple-grid.lan
[2025-06-03 09:39:36] apptainer works
[2025-06-03 09:39:36] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:39:36] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:39:36] Starting ATLAS job with PandaID=6677387524
[2025-06-03 09:39:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:09:19]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:09:19] 2025-06-03 11:25:30,969 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:09:19] 2025-06-03 11:25:30,969 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:09:19] 2025-06-03 11:25:30,969 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:09:19] 2025-06-03 11:25:30,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:09:19] 2025-06-03 11:25:30,974 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:09:19] 2025-06-03 11:25:30,975 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 14:09:19] 2025-06-03 11:25:30,976 | INFO     | sum of deviations: 45516454606.99999
[2025-06-03 14:09:19] 2025-06-03 11:25:30,976 | INFO     | mean x: 1748943411.5
[2025-06-03 14:09:19] 2025-06-03 11:25:30,976 | INFO     | mean y: 2438120.1333333333
[2025-06-03 14:09:19] 2025-06-03 11:25:30,977 | INFO     | -- intersect: -27719125579.839928
[2025-06-03 14:09:19] 2025-06-03 11:25:30,977 | INFO     | intersect: -27719125579.839928
[2025-06-03 14:09:19] 2025-06-03 11:25:30,979 | INFO     | chi2: 6.617976808759562
[2025-06-03 14:09:19] 2025-06-03 11:25:30,980 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 14:09:19] 2025-06-03 11:25:30,982 | INFO     | sum of deviations: 58162100782.00001
[2025-06-03 14:09:19] 2025-06-03 11:25:30,982 | INFO     | mean x: 1748943259.0
[2025-06-03 14:09:19] 2025-06-03 11:25:30,982 | INFO     | mean y: 2447545.624390244
[2025-06-03 14:09:19] 2025-06-03 11:25:30,982 | INFO     | -- intersect: -38076604789.946815
[2025-06-03 14:09:19] 2025-06-03 11:25:30,982 | INFO     | intersect: -38076604789.946815
[2025-06-03 14:09:19] 2025-06-03 11:25:30,982 | INFO     | chi2: 5.911516224766776
[2025-06-03 14:09:19] 2025-06-03 11:25:30,982 | INFO     | current chi2=5.911516224766776 (change=10.674872463404743 %)
[2025-06-03 14:09:19] 2025-06-03 11:25:30,983 | INFO     | right removable region: 204
[2025-06-03 14:09:19] 2025-06-03 11:25:30,983 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 14:09:19] 2025-06-03 11:25:30,985 | INFO     | sum of deviations: -25969574042.000004
[2025-06-03 14:09:19] 2025-06-03 11:25:30,985 | INFO     | mean x: 1748943564.0
[2025-06-03 14:09:19] 2025-06-03 11:25:30,985 | INFO     | mean y: 2492491.4341463414
[2025-06-03 14:09:19] 2025-06-03 11:25:30,985 | INFO     | -- intersect: 17004920674.677658
[2025-06-03 14:09:19] 2025-06-03 11:25:30,985 | INFO     | intersect: 17004920674.677658
[2025-06-03 14:09:19] 2025-06-03 11:25:30,985 | INFO     | chi2: 1.8889177695449777
[2025-06-03 14:09:19] 2025-06-03 11:25:30,986 | INFO     | current chi2=1.8889177695449777 (change=71.45777593168953 %)
[2025-06-03 14:09:19] 2025-06-03 11:25:30,986 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 14:09:19] 2025-06-03 11:25:30,987 | INFO     | sum of deviations: -52369648355.50003
[2025-06-03 14:09:19] 2025-06-03 11:25:30,988 | INFO     | mean x: 1748943716.5
[2025-06-03 14:09:19] 2025-06-03 11:25:30,988 | INFO     | mean y: 2513422.505
[2025-06-03 14:09:19] 2025-06-03 11:25:30,988 | INFO     | -- intersect: 36925594827.94634
[2025-06-03 14:09:19] 2025-06-03 11:25:30,988 | INFO     | intersect: 36925594827.94634
[2025-06-03 14:09:19] 2025-06-03 11:25:30,988 | INFO     | chi2: 0.9902233329701833
[2025-06-03 14:09:19] 2025-06-03 11:25:30,988 | INFO     | current chi2=0.9902233329701833 (change=47.57721331571153 %)
[2025-06-03 14:09:19] 2025-06-03 11:25:30,989 | INFO     | sum of square deviations: 2299168690.0
[2025-06-03 14:09:19] 2025-06-03 11:25:30,990 | INFO     | sum of deviations: -48521362858.00001
[2025-06-03 14:09:19] 2025-06-03 11:25:30,990 | INFO     | mean x: 1748943869.0
[2025-06-03 14:09:19] 2025-06-03 11:25:30,990 | INFO     | mean y: 2510155.046153846
[2025-06-03 14:09:19] 2025-06-03 11:25:30,991 | INFO     | -- intersect: 36911998551.92556
[2025-06-03 14:09:19] 2025-06-03 11:25:30,991 | INFO     | intersect: 36911998551.92556
[2025-06-03 14:09:19] 2025-06-03 11:25:30,991 | INFO     | chi2: 0.9805190260676823
[2025-06-03 14:09:19] 2025-06-03 11:25:30,991 | INFO     | current chi2=0.9805190260676823 (change=0.9800119406793681 %)
[2025-06-03 14:09:19] 2025-06-03 11:25:30,991 | INFO     | left removable region: 30
[2025-06-03 14:09:19] 2025-06-03 11:25:30,992 | INFO     | sum of square deviations: 1633472487.5
[2025-06-03 14:09:19] 2025-06-03 11:25:31,000 | INFO     | sum of deviations: -15361572782.000002
[2025-06-03 14:09:19] 2025-06-03 11:25:31,000 | INFO     | mean x: 1748944143.5
[2025-06-03 14:09:19] 2025-06-03 11:25:31,000 | INFO     | mean y: 2503282.206896552
[2025-06-03 14:09:19] 2025-06-03 11:25:31,000 | INFO     | -- intersect: 16449999617.542574
[2025-06-03 14:09:19] 2025-06-03 11:25:31,001 | INFO     | intersect: 16449999617.542574
[2025-06-03 14:09:19] 2025-06-03 11:25:31,001 | INFO     | chi2: 0.1284037323554151
[2025-06-03 14:09:19] 2025-06-03 11:25:31,001 | INFO     | -- intersect: 16449999617.542574
[2025-06-03 14:09:19] 2025-06-03 11:25:31,001 | INFO     | current memory leak: -9.40 B/s (using 174 data points, chi2=0.13)
[2025-06-03 14:09:19] 2025-06-03 11:25:31,002 | INFO     | ..............................
[2025-06-03 14:09:19] 2025-06-03 11:25:31,002 | INFO     | . Timing measurements:
[2025-06-03 14:09:19] 2025-06-03 11:25:31,002 | INFO     | . get job = 0 s
[2025-06-03 14:09:19] 2025-06-03 11:25:31,002 | INFO     | . initial setup = 8 s
[2025-06-03 14:09:19] 2025-06-03 11:25:31,002 | INFO     | . payload setup = 136 s
[2025-06-03 14:09:19] 2025-06-03 11:25:31,002 | INFO     | . stage-in = 0 s
[2025-06-03 14:09:19] 2025-06-03 11:25:31,003 | INFO     | . payload execution = 12937 s
[2025-06-03 14:09:19] 2025-06-03 11:25:31,003 | INFO     | . stage-out = 6 s
[2025-06-03 14:09:19] 2025-06-03 11:25:31,003 | INFO     | . log creation = 1 s
[2025-06-03 14:09:19] 2025-06-03 11:25:31,003 | INFO     | ..............................
[2025-06-03 14:09:19] 2025-06-03 11:25:31,215 | INFO     | 
[2025-06-03 14:09:19] 2025-06-03 11:25:31,215 | INFO     | job summary report
[2025-06-03 14:09:19] 2025-06-03 11:25:31,215 | INFO     | --------------------------------------------------
[2025-06-03 14:09:19] 2025-06-03 11:25:31,215 | INFO     | PanDA job id: 6677387524
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | task id: 45006595
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | errors: (none)
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | pilot state: finished 
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | transexitcode: 0
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | exeerrorcode: 0
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | exeerrordiag: 
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | exitcode: 0
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | exitmsg: OK
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | cpuconsumptiontime: 47836 s
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | nevents: 400
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | neventsw: 0
[2025-06-03 14:09:19] 2025-06-03 11:25:31,216 | INFO     | pid: 24714
[2025-06-03 14:09:19] 2025-06-03 11:25:31,217 | INFO     | pgrp: 24714
[2025-06-03 14:09:19] 2025-06-03 11:25:31,217 | INFO     | corecount: 8
[2025-06-03 14:09:19] 2025-06-03 11:25:31,217 | INFO     | event service: False
[2025-06-03 14:09:19] 2025-06-03 11:25:31,217 | INFO     | sizes: {0: 2405006, 1: 2405205, 12: 2405205, 23: 2405233, 33: 2405261, 44: 2405317, 55: 2405473, 66: 2405501, 76: 2405529, 85: 2405791, 87: 2405819, 13077: 2435336
[2025-06-03 14:09:19] 2025-06-03 11:25:31,217 | INFO     | --------------------------------------------------
[2025-06-03 14:09:19] 2025-06-03 11:25:31,217 | INFO     | 
[2025-06-03 14:09:19] 2025-06-03 11:25:31,217 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-03 14:09:19] 2025-06-03 11:25:32,368 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,369 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,369 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,369 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,369 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,369 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,369 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,369 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,369 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,370 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,370 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,370 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,370 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,370 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,370 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,370 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,370 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,370 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:09:19] 2025-06-03 11:25:32,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,370 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:09:19] 2025-06-03 11:25:32,371 | INFO     | job 6677387524 has completed (purged errors)
[2025-06-03 14:09:19] 2025-06-03 11:25:32,371 | INFO     | overall cleanup function is called
[2025-06-03 14:09:19] 2025-06-03 11:25:33,331 | INFO     | PID=16155 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 14:09:19] 2025-06-03 11:25:33,331 | INFO     | .. there are 9 such processes running
[2025-06-03 14:09:19] 2025-06-03 11:25:33,380 | INFO     | --- collectZombieJob: --- 10, [24714]
[2025-06-03 14:09:19] 2025-06-03 11:25:33,380 | INFO     | zombie collector waiting for pid 24714
[2025-06-03 14:09:19] 2025-06-03 11:25:33,380 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:09:19] 2025-06-03 11:25:33,381 | INFO     | collected zombie processes
[2025-06-03 14:09:19] 2025-06-03 11:25:33,381 | INFO     | will attempt to kill all subprocesses of pid=24714
[2025-06-03 14:09:19] 2025-06-03 11:25:33,485 | INFO     | process IDs to be killed: [24714] (in reverse order)
[2025-06-03 14:09:19] 2025-06-03 11:25:33,898 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:09:19] 2025-06-03 11:25:33,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:09:19] 2025-06-03 11:25:33,901 | INFO     | did not find any defunct processes belonging to 24714
[2025-06-03 14:09:19] 2025-06-03 11:25:33,905 | INFO     | did not find any defunct processes belonging to 24714
[2025-06-03 14:09:19] 2025-06-03 11:25:33,905 | INFO     | ready for new job
[2025-06-03 14:09:19] 2025-06-03 11:25:33,905 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:09:19] 2025-06-03 11:25:33,907 | INFO     | **************************************
[2025-06-03 14:09:19] 2025-06-03 11:25:33,907 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:09:19] 2025-06-03 11:25:33,907 | INFO     | **************************************
[2025-06-03 14:09:19] 2025-06-03 11:25:33,907 | INFO     | 
[2025-06-03 14:09:19] 2025-06-03 11:25:33,908 | INFO     | pilot is running in a VM
[2025-06-03 14:09:19] 2025-06-03 11:25:33,908 | INFO     | architecture information:
[2025-06-03 14:09:19] 2025-06-03 11:25:33,916 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:09:19] 2025-06-03 11:25:34,084 | INFO     | cat /etc/os-release:
[2025-06-03 14:09:19] NAME="CentOS Linux"
[2025-06-03 14:09:19] VERSION="7 (Core)"
[2025-06-03 14:09:19] ID="centos"
[2025-06-03 14:09:19] ID_LIKE="rhel fedora"
[2025-06-03 14:09:19] VERSION_ID="7"
[2025-06-03 14:09:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:09:19] ANSI_COLOR="0;31"
[2025-06-03 14:09:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:09:19] HOME_URL="https://www.centos.org/"
[2025-06-03 14:09:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:09:19] 
[2025-06-03 14:09:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:09:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:09:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:09:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:09:19] 
[2025-06-03 14:09:19] 2025-06-03 11:25:34,084 | INFO     | **************************************
[2025-06-03 14:09:19] 2025-06-03 11:25:34,588 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-03 14:09:19] 2025-06-03 11:25:34,811 | INFO     | sufficient remaining disk space (496650682368 B)
[2025-06-03 14:09:19] 2025-06-03 11:25:34,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:09:19] 2025-06-03 11:25:34,812 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:09:19] 2025-06-03 11:25:34,812 | INFO     | update_server=False
[2025-06-03 14:09:19] 2025-06-03 11:25:34,812 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:09:19] 2025-06-03 11:25:34,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:09:19] 2025-06-03 11:25:35,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:09:19] 2025-06-03 11:25:35,061 | INFO     | aborting loop
[2025-06-03 14:09:19] 2025-06-03 11:25:35,338 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:09:19] 2025-06-03 11:25:35,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:09:19] 2025-06-03 11:25:35,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:09:19] 2025-06-03 11:25:35,646 | INFO     | all payload control threads have been joined
[2025-06-03 14:09:19] 2025-06-03 11:25:35,818 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:35,857 | INFO     | all data control threads have been joined
[2025-06-03 14:09:19] 2025-06-03 11:25:35,940 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:35,968 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:36,068 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:36,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:09:19] 2025-06-03 11:25:36,253 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:36,255 | INFO     | [job] validate thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:36,388 | INFO     | all job control threads have been joined
[2025-06-03 14:09:19] 2025-06-03 11:25:36,652 | INFO     | [payload] control thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:36,729 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:36,754 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:36,820 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:36,830 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:36,863 | INFO     | [data] control thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:37,142 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:37,198 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:37,394 | INFO     | [job] control thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:38,179 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:09:19] 2025-06-03 11:25:42,190 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:09:19] 2025-06-03 11:25:42,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143353448256)>', '<ExcThread(monitor, started 140142694098688)>']
[2025-06-03 14:09:19] 2025-06-03 11:25:43,384 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:09:19] 2025-06-03 11:25:43,384 | INFO     | [monitor] control thread has ended
[2025-06-03 14:09:19] 2025-06-03 11:25:47,610 | INFO     | all workflow threads have been joined
[2025-06-03 14:09:19] 2025-06-03 11:25:47,610 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:09:19] 2025-06-03 11:25:47,611 | INFO     | traces error code: 0
[2025-06-03 14:09:19] 2025-06-03 11:25:47,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:09:19] 2025-06-03 11:25:47,894 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:09:19] 2025-06-03 11:25:47,918 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:09:19] 2025-06-03 11:25:47,970 [wrapper] pilotpid: 16155
[2025-06-03 14:09:19] 2025-06-03 11:25:48,025 [wrapper] Pilot exit status: 0
[2025-06-03 14:09:19] 2025-06-03 11:25:48,259 [wrapper] pandaids: 6677387524
[2025-06-03 14:09:19] 2025-06-03 11:25:48,560 [wrapper] cleanup supervisor_pilot 30183 16156
[2025-06-03 14:09:19] 2025-06-03 11:25:48,601 [wrapper] Test setup, not cleaning
[2025-06-03 14:09:19] 2025-06-03 11:25:48,654 [wrapper] apfmon messages muted
[2025-06-03 14:09:19] 2025-06-03 11:25:48,764 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:09:19] 2025-06-03 11:25:48,870 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:09:19]  *** Error codes and diagnostics ***
[2025-06-03 14:09:19]     "exeErrorCode": 0,
[2025-06-03 14:09:19]     "exeErrorDiag": "",
[2025-06-03 14:09:19]     "pilotErrorCode": 0,
[2025-06-03 14:09:19]     "pilotErrorDiag": "",
[2025-06-03 14:09:19]  *** Listing of results directory ***
[2025-06-03 14:09:19] total 385396
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:25 pilot3.tar.gz
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:29 queuedata.json
[2025-06-03 14:09:19] -rwx------. 1 boinc boinc     37140 Jun  2 19:29 runpilot2-wrapper.sh
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc       100 Jun  3 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:09:19] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 09:20 run_atlas
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc       105 Jun  3 09:20 job.xml
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc      6392 Jun  3 09:20 init_data.xml
[2025-06-03 14:09:19] -rw-r--r--. 2 boinc boinc 214854431 Jun  3 09:20 EVNT.45006593._000222.pool.root.1
[2025-06-03 14:09:19] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:20 start_atlas.sh
[2025-06-03 14:09:19] drwxrwx--x. 2 boinc boinc        68 Jun  3 09:20 shared
[2025-06-03 14:09:19] -rw-r--r--. 2 boinc boinc    508878 Jun  3 09:20 input.tar.gz
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc         0 Jun  3 09:20 boinc_lockfile
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc      2521 Jun  3 09:39 pandaJob.out
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc    985499 Jun  3 09:42 agis_schedconf.cvmfs.json
[2025-06-03 14:09:19] drwx------. 4 boinc boinc      4096 Jun  3 09:42 pilot3
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc 172953959 Jun  3 13:22 HITS.45006595._005531.pool.root.1
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc       531 Jun  3 13:23 boinc_task_state.xml
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc      1020 Jun  3 13:23 memory_monitor_summary.json
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc   1603667 Jun  3 13:23 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc    366506 Jun  3 13:23 log.45006595._005531.job.log.tgz.1
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc        95 Jun  3 13:25 pilot_heartbeat.json
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc      7691 Jun  3 13:25 heartbeat.json
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc      4416 Jun  3 13:25 pilotlog.txt
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc   1139709 Jun  3 13:25 log.45006595._005531.job.log.1
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc       357 Jun  3 13:25 output.list
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc       620 Jun  3 13:25 runtime_log
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc   1525760 Jun  3 13:25 result.tar.gz
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc      8659 Jun  3 13:25 runtime_log.err
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc       657 Jun  3 13:25 DePLDmd9Ng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYkfKDm7nYSqn.diag
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc      8192 Jun  3 14:09 boinc_mmap_file
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc        28 Jun  3 14:09 wrapper_checkpoint.txt
[2025-06-03 14:09:19] -rw-r--r--. 1 boinc boinc     20593 Jun  3 14:09 stderr.txt
[2025-06-03 14:09:19] HITS file was successfully produced:
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc 172953959 Jun  3 13:22 shared/HITS.pool.root.1
[2025-06-03 14:09:19]  *** Contents of shared directory: ***
[2025-06-03 14:09:19] total 380732
[2025-06-03 14:09:19] -rw-r--r--. 2 boinc boinc 214854431 Jun  3 09:20 ATLAS.root_0
[2025-06-03 14:09:19] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:20 start_atlas.sh
[2025-06-03 14:09:19] -rw-r--r--. 2 boinc boinc    508878 Jun  3 09:20 input.tar.gz
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc 172953959 Jun  3 13:22 HITS.pool.root.1
[2025-06-03 14:09:19] -rw-------. 1 boinc boinc   1525760 Jun  3 13:25 result.tar.gz
14:09:21 (30964): run_atlas exited; CPU time 48024.092479
14:09:21 (30964): called boinc_finish(0)

</stderr_txt>
]]>

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