Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:15:20 (9136): wrapper (7.7.26015): starting
20:15:20 (9136): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 20:15:20] Arguments: --nthreads 12
[2025-06-02 20:15:20] Threads: 12
[2025-06-02 20:15:20] Checking for CVMFS
[2025-06-02 20:15:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 20:15:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 20:15:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 20:15:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 20:15:21] 2.10.0.0 29567 396 75664 146724 3 187 13525434 16777216 922 130560 0 1546071 99.997 148489 6767 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-02 20:15:21] CVMFS is ok
[2025-06-02 20:15:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 20:15:21] Checking for apptainer binary...
[2025-06-02 20:15:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 20:15:21] Running /usr/bin/apptainer --version
[2025-06-02 20:15:21] apptainer version 1.3.6-150600.4.9.1
[2025-06-02 20:15:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 20:15:21] boinc-runner
[2025-06-02 20:15:21] apptainer works
[2025-06-02 20:15:21] Set ATHENA_PROC_NUMBER=12
[2025-06-02 20:15:21] Set ATHENA_CORE_NUMBER=12
[2025-06-02 20:15:21] Starting ATLAS job with PandaID=6677386344
[2025-06-02 20:15:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 20:44:42]  *** The last 200 lines of the pilot log: ***
[2025-06-02 20:44:42]  is_tar=False
[2025-06-02 20:44:42]  lfn=log.45006595._004903.job.log.tgz.1
[2025-06-02 20:44:42]  mtime=0
[2025-06-02 20:44:42]  protocol_id=None
[2025-06-02 20:44:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-02 20:44:42]  replicas=None
[2025-06-02 20:44:42]  scope=mc23_13p6TeV
[2025-06-02 20:44:42]  status=None
[2025-06-02 20:44:42]  status_code=0
[2025-06-02 20:44:42]  storage_token=
[2025-06-02 20:44:42]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6677386344/log.45006595._004903.job.log.tgz.1
[2025-06-02 20:44:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/b3/log.45006595._004903.job.log.tgz.1
[2025-06-02 20:44:42]  workdir=None
[2025-06-02 20:44:42] ]
[2025-06-02 20:44:42] 2025-06-03 01:44:14,151 | INFO     | transferring file log.45006595._004903.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6677386344/log.45006595._004903.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-02 20:44:42] 2025-06-03 01:44:14,151 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6677386344/log.45006595._004903.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._004903.job
[2025-06-02 20:44:42] 2025-06-03 01:44:14,163 | INFO     | adding to output.list: log.45006595._004903.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/b3/log.45006595._004903.job.log.tg
[2025-06-02 20:44:42] 2025-06-03 01:44:14,164 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-02 20:44:42] 2025-06-03 01:44:14,164 | INFO     | summary of transferred files:
[2025-06-02 20:44:42] 2025-06-03 01:44:14,164 | INFO     |  -- lfn=log.45006595._004903.job.log.tgz.1, status_code=0, status=transferred
[2025-06-02 20:44:42] 2025-06-03 01:44:14,164 | INFO     | stage-out finished correctly
[2025-06-02 20:44:42] 2025-06-03 01:44:15,225 | INFO     | monitor loop #137: job 0:6677386344 is in state 'finished'
[2025-06-02 20:44:42] 2025-06-03 01:44:15,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 20:44:42] 2025-06-03 01:44:17,177 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-02 20:44:42] 2025-06-03 01:44:17,603 | INFO     | PID=12998 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-02 20:44:42] 2025-06-03 01:44:17,603 | INFO     | .. there are 2 such processes running
[2025-06-02 20:44:42] 2025-06-03 01:44:17,734 | INFO     | monitor loop #138: job 0:6677386344 is in state 'finished'
[2025-06-02 20:44:42] 2025-06-03 01:44:17,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 20:44:42] 2025-06-03 01:44:19,450 | INFO     | job 6677386344 has state=finished
[2025-06-02 20:44:42] 2025-06-03 01:44:19,451 | INFO     | preparing for final server update for job 6677386344 in state='finished'
[2025-06-02 20:44:42] 2025-06-03 01:44:19,451 | INFO     | this job has now completed (state=finished)
[2025-06-02 20:44:42] 2025-06-03 01:44:19,451 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-02 20:44:42] 2025-06-03 01:44:19,451 | INFO     | log transfer has been attempted: DONE
[2025-06-02 20:44:42] 2025-06-03 01:44:19,451 | INFO     | job 6677386344 has finished - writing final server update
[2025-06-02 20:44:42] 2025-06-03 01:44:19,452 | INFO     | total number of processed events: 400 (read)
[2025-06-02 20:44:42] 2025-06-03 01:44:19,454 | INFO     | executing command: lscpu
[2025-06-02 20:44:42] 2025-06-03 01:44:19,477 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-02 20:44:42] 2025-06-03 01:44:20,237 | INFO     | monitor loop #139: job 0:6677386344 is in state 'finished'
[2025-06-02 20:44:42] 2025-06-03 01:44:20,237 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 20:44:42] 2025-06-03 01:44:22,413 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 20:44:42] 2025-06-03 01:44:22,414 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6677386344/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 20:44:42] 2025-06-03 01:44:22,415 | INFO     | extracted standard info from prmon json
[2025-06-02 20:44:42] 2025-06-03 01:44:22,415 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 20:44:42] 2025-06-03 01:44:22,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 20:44:42] 2025-06-03 01:44:22,415 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 20:44:42] 2025-06-03 01:44:22,415 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 20:44:42] 2025-06-03 01:44:22,416 | INFO     | fitting pss+swap vs Time
[2025-06-02 20:44:42] 2025-06-03 01:44:22,416 | INFO     | sum of square deviations: 2865170.0
[2025-06-02 20:44:42] 2025-06-03 01:44:22,416 | INFO     | sum of deviations: 135745435.0
[2025-06-02 20:44:42] 2025-06-03 01:44:22,416 | INFO     | mean x: 1748914264.0
[2025-06-02 20:44:42] 2025-06-03 01:44:22,416 | INFO     | mean y: 2706227.714285714
[2025-06-02 20:44:42] 2025-06-03 01:44:22,416 | INFO     | -- intersect: -82856994084.79243
[2025-06-02 20:44:42] 2025-06-03 01:44:22,416 | INFO     | intersect: -82856994084.79243
[2025-06-02 20:44:42] 2025-06-03 01:44:22,416 | INFO     | chi2: 0.0002125301260733321
[2025-06-02 20:44:42] 2025-06-03 01:44:22,416 | INFO     | -- intersect: -82856994084.79243
[2025-06-02 20:44:42] 2025-06-03 01:44:22,416 | INFO     | current memory leak: 47.38 B/s (using 21 data points, chi2=0.00)
[2025-06-02 20:44:42] 2025-06-03 01:44:22,417 | INFO     | ..............................
[2025-06-02 20:44:42] 2025-06-03 01:44:22,417 | INFO     | . Timing measurements:
[2025-06-02 20:44:42] 2025-06-03 01:44:22,417 | INFO     | . get job = 0 s
[2025-06-02 20:44:42] 2025-06-03 01:44:22,417 | INFO     | . initial setup = 2 s
[2025-06-02 20:44:42] 2025-06-03 01:44:22,417 | INFO     | . payload setup = 3 s
[2025-06-02 20:44:42] 2025-06-03 01:44:22,417 | INFO     | . stage-in = 0 s
[2025-06-02 20:44:42] 2025-06-03 01:44:22,417 | INFO     | . payload execution = 1703 s
[2025-06-02 20:44:42] 2025-06-03 01:44:22,417 | INFO     | . stage-out = 0 s
[2025-06-02 20:44:42] 2025-06-03 01:44:22,417 | INFO     | . log creation = 0 s
[2025-06-02 20:44:42] 2025-06-03 01:44:22,417 | INFO     | ..............................
[2025-06-02 20:44:42] 2025-06-03 01:44:22,472 | INFO     | 
[2025-06-02 20:44:42] 2025-06-03 01:44:22,472 | INFO     | job summary report
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | --------------------------------------------------
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | PanDA job id: 6677386344
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | task id: 45006595
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | errors: (none)
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | pilot state: finished 
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | transexitcode: 0
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | exeerrorcode: 0
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | exeerrordiag: 
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | exitcode: 0
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | exitmsg: OK
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | cpuconsumptiontime: 18196 s
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | nevents: 400
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | neventsw: 0
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | pid: 20072
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | pgrp: 20072
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | corecount: 12
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | event service: False
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | sizes: {0: 2405171, 3: 2405377, 11: 2405405, 1711: 2430214, 1712: 2439155, 1715: 2439211, 1720: 2439509}
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | --------------------------------------------------
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | 
[2025-06-02 20:44:42] 2025-06-03 01:44:22,473 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-02 20:44:42] 2025-06-03 01:44:22,487 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,487 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,487 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,487 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | job 6677386344 has completed (purged errors)
[2025-06-02 20:44:42] 2025-06-03 01:44:22,488 | INFO     | overall cleanup function is called
[2025-06-02 20:44:42] 2025-06-03 01:44:23,494 | INFO     | --- collectZombieJob: --- 10, [20072]
[2025-06-02 20:44:42] 2025-06-03 01:44:23,494 | INFO     | zombie collector waiting for pid 20072
[2025-06-02 20:44:42] 2025-06-03 01:44:23,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 20:44:42] 2025-06-03 01:44:23,494 | INFO     | collected zombie processes
[2025-06-02 20:44:42] 2025-06-03 01:44:23,494 | INFO     | will attempt to kill all subprocesses of pid=20072
[2025-06-02 20:44:42] 2025-06-03 01:44:23,555 | INFO     | process IDs to be killed: [20072] (in reverse order)
[2025-06-02 20:44:42] 2025-06-03 01:44:23,585 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 20:44:42] 2025-06-03 01:44:23,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 20:44:42] 2025-06-03 01:44:23,587 | INFO     | did not find any defunct processes belonging to 20072
[2025-06-02 20:44:42] 2025-06-03 01:44:23,589 | INFO     | did not find any defunct processes belonging to 20072
[2025-06-02 20:44:42] 2025-06-03 01:44:23,589 | INFO     | ready for new job
[2025-06-02 20:44:42] 2025-06-03 01:44:23,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 20:44:42] 2025-06-03 01:44:23,591 | INFO     | **************************************
[2025-06-02 20:44:42] 2025-06-03 01:44:23,591 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 20:44:42] 2025-06-03 01:44:23,591 | INFO     | **************************************
[2025-06-02 20:44:42] 2025-06-03 01:44:23,591 | INFO     | 
[2025-06-02 20:44:42] 2025-06-03 01:44:23,592 | INFO     | architecture information:
[2025-06-02 20:44:42] 2025-06-03 01:44:23,592 | INFO     | executing command: cat /etc/os-release
[2025-06-02 20:44:42] 2025-06-03 01:44:23,603 | INFO     | cat /etc/os-release:
[2025-06-02 20:44:42] NAME="CentOS Linux"
[2025-06-02 20:44:42] VERSION="7 (Core)"
[2025-06-02 20:44:42] ID="centos"
[2025-06-02 20:44:42] ID_LIKE="rhel fedora"
[2025-06-02 20:44:42] VERSION_ID="7"
[2025-06-02 20:44:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 20:44:42] ANSI_COLOR="0;31"
[2025-06-02 20:44:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 20:44:42] HOME_URL="https://www.centos.org/"
[2025-06-02 20:44:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 20:44:42] 
[2025-06-02 20:44:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 20:44:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 20:44:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 20:44:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 20:44:42] 
[2025-06-02 20:44:42] 2025-06-03 01:44:23,603 | INFO     | **************************************
[2025-06-02 20:44:42] 2025-06-03 01:44:24,104 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-02 20:44:42] 2025-06-03 01:44:24,116 | INFO     | sufficient remaining disk space (3890166628352 B)
[2025-06-02 20:44:42] 2025-06-03 01:44:24,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 20:44:42] 2025-06-03 01:44:24,116 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 20:44:42] 2025-06-03 01:44:24,116 | INFO     | update_server=False
[2025-06-02 20:44:42] 2025-06-03 01:44:24,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 20:44:42] 2025-06-03 01:44:24,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 20:44:42] 2025-06-03 01:44:24,117 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 20:44:42] 2025-06-03 01:44:24,117 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 20:44:42] 2025-06-03 01:44:24,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 20:44:42] 2025-06-03 01:44:24,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 20:44:42] 2025-06-03 01:44:24,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 20:44:42] 2025-06-03 01:44:24,118 | INFO     | aborting loop
[2025-06-02 20:44:42] 2025-06-03 01:44:24,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 20:44:42] 2025-06-03 01:44:24,625 | INFO     | all data control threads have been joined
[2025-06-02 20:44:42] 2025-06-03 01:44:24,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 20:44:42] 2025-06-03 01:44:24,926 | INFO     | all job control threads have been joined
[2025-06-02 20:44:42] 2025-06-03 01:44:25,122 | INFO     | [job] retrieve thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:25,122 | INFO     | [job] queue monitor thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:25,122 | INFO     | [job] job monitor thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:25,414 | INFO     | all payload control threads have been joined
[2025-06-02 20:44:42] 2025-06-03 01:44:25,519 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:25,553 | INFO     | [data] copytool_in thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:25,630 | INFO     | [data] control thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:25,654 | INFO     | [job] validate thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:25,814 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:25,930 | INFO     | [job] control thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:26,126 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:26,173 | INFO     | [payload] failed_post thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:26,418 | INFO     | [payload] control thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:26,674 | INFO     | [payload] validate_post thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:26,743 | INFO     | [data] copytool_out thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:28,122 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:34,766 | INFO     | job.realtimelogging is not enabled
[2025-06-02 20:44:42] 2025-06-03 01:44:35,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 20:44:42] 2025-06-03 01:44:37,619 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140147480799040)>', '<ExcThread(monitor, started 140146846455552)>']
[2025-06-02 20:44:42] 2025-06-03 01:44:38,182 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 20:44:42] 2025-06-03 01:44:38,182 | INFO     | [monitor] control thread has ended
[2025-06-02 20:44:42] 2025-06-03 01:44:42,645 | INFO     | all workflow threads have been joined
[2025-06-02 20:44:42] 2025-06-03 01:44:42,645 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 20:44:42] 2025-06-03 01:44:42,645 | INFO     | traces error code: 0
[2025-06-02 20:44:42] 2025-06-03 01:44:42,645 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 20:44:42] 2025-06-03 01:44:42,706 [wrapper] ==== pilot stdout END ====
[2025-06-02 20:44:42] 2025-06-03 01:44:42,708 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 20:44:42] 2025-06-03 01:44:42,709 [wrapper] pilotpid: 12998
[2025-06-02 20:44:42] 2025-06-03 01:44:42,711 [wrapper] Pilot exit status: 0
[2025-06-02 20:44:42] 2025-06-03 01:44:42,716 [wrapper] pandaids: 6677386344
[2025-06-02 20:44:42] 2025-06-03 01:44:42,734 [wrapper] cleanup supervisor_pilot  3604 12999
[2025-06-02 20:44:42] 2025-06-03 01:44:42,736 [wrapper] Test setup, not cleaning
[2025-06-02 20:44:42] 2025-06-03 01:44:42,737 [wrapper] apfmon messages muted
[2025-06-02 20:44:42] 2025-06-03 01:44:42,739 [wrapper] ==== wrapper stdout END ====
[2025-06-02 20:44:42] 2025-06-03 01:44:42,741 [wrapper] ==== wrapper stderr END ====
[2025-06-02 20:44:42]  *** Error codes and diagnostics ***
[2025-06-02 20:44:42]     "exeErrorCode": 0,
[2025-06-02 20:44:42]     "exeErrorDiag": "",
[2025-06-02 20:44:42]     "pilotErrorCode": 0,
[2025-06-02 20:44:42]     "pilotErrorDiag": "",
[2025-06-02 20:44:42]  *** Listing of results directory ***
[2025-06-02 20:44:42] total 390012
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc    495897 Jun  2 11:40 pilot3.tar.gz
[2025-06-02 20:44:42] -rwx------ 1 boinc boinc     37140 Jun  2 12:05 runpilot2-wrapper.sh
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc      5111 Jun  2 12:05 queuedata.json
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc       100 Jun  2 20:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 20:44:42] -rwxr-xr-x 1 boinc boinc      7986 Jun  2 20:15 run_atlas
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc       105 Jun  2 20:15 job.xml
[2025-06-02 20:44:42] -rw-r--r-- 2 boinc boinc     15093 Jun  2 20:15 start_atlas.sh
[2025-06-02 20:44:42] drwxrwx--x 1 boinc boinc        76 Jun  2 20:15 shared
[2025-06-02 20:44:42] -rw-r--r-- 2 boinc boinc    508876 Jun  2 20:15 input.tar.gz
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc     10043 Jun  2 20:15 init_data.xml
[2025-06-02 20:44:42] -rw-r--r-- 2 boinc boinc 213665115 Jun  2 20:15 EVNT.45006593._000197.pool.root.1
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc         0 Jun  2 20:15 boinc_lockfile
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc      2518 Jun  2 20:15 pandaJob.out
[2025-06-02 20:44:42] -rw------- 1 boinc boinc    988073 Jun  2 20:15 agis_schedconf.cvmfs.json
[2025-06-02 20:44:42] -rw------- 1 boinc boinc   1603667 Jun  2 20:15 agis_ddmendpoints.agis.ALL.json
[2025-06-02 20:44:42] drwx------ 1 boinc boinc       368 Jun  2 20:15 pilot3
[2025-06-02 20:44:42] -rw------- 1 boinc boinc        95 Jun  2 20:43 pilot_heartbeat.json
[2025-06-02 20:44:42] -rw------- 1 boinc boinc 180830485 Jun  2 20:43 HITS.45006595._004903.pool.root.1
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc       529 Jun  2 20:43 boinc_task_state.xml
[2025-06-02 20:44:42] -rw------- 1 boinc boinc      1028 Jun  2 20:44 memory_monitor_summary.json
[2025-06-02 20:44:42] -rw------- 1 boinc boinc    319481 Jun  2 20:44 log.45006595._004903.job.log.tgz.1
[2025-06-02 20:44:42] -rw------- 1 boinc boinc      7680 Jun  2 20:44 heartbeat.json
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc        27 Jun  2 20:44 wrapper_checkpoint.txt
[2025-06-02 20:44:42] -rw------- 1 boinc boinc      4550 Jun  2 20:44 pilotlog.txt
[2025-06-02 20:44:42] -rw------- 1 boinc boinc    205596 Jun  2 20:44 log.45006595._004903.job.log.1
[2025-06-02 20:44:42] -rw------- 1 boinc boinc       357 Jun  2 20:44 output.list
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc       620 Jun  2 20:44 runtime_log
[2025-06-02 20:44:42] -rw------- 1 boinc boinc    542720 Jun  2 20:44 result.tar.gz
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc      8683 Jun  2 20:44 runtime_log.err
[2025-06-02 20:44:42] -rw------- 1 boinc boinc       653 Jun  2 20:44 8mcKDmumNg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtsVKDmFlDT5m.diag
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc     21229 Jun  2 20:44 stderr.txt
[2025-06-02 20:44:42] -rw-r--r-- 1 boinc boinc      8192 Jun  2 20:44 boinc_mmap_file
[2025-06-02 20:44:42] HITS file was successfully produced:
[2025-06-02 20:44:42] -rw------- 1 boinc boinc 180830485 Jun  2 20:43 shared/HITS.pool.root.1
[2025-06-02 20:44:42]  *** Contents of shared directory: ***
[2025-06-02 20:44:42] total 386304
[2025-06-02 20:44:42] -rw-r--r-- 2 boinc boinc     15093 Jun  2 20:15 start_atlas.sh
[2025-06-02 20:44:42] -rw-r--r-- 2 boinc boinc    508876 Jun  2 20:15 input.tar.gz
[2025-06-02 20:44:42] -rw-r--r-- 2 boinc boinc 213665115 Jun  2 20:15 ATLAS.root_0
[2025-06-02 20:44:42] -rw------- 1 boinc boinc 180830485 Jun  2 20:43 HITS.pool.root.1
[2025-06-02 20:44:42] -rw------- 1 boinc boinc    542720 Jun  2 20:44 result.tar.gz
20:44:44 (9136): run_atlas exited; CPU time 18205.509732
20:44:44 (9136): called boinc_finish(0)

</stderr_txt>
]]>

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