Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:06:16 (22517): wrapper (7.7.26015): starting
08:06:16 (22517): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:06:16] Arguments: --nthreads 8
[2025-06-03 08:06:16] Threads: 8
[2025-06-03 08:06:16] Checking for CVMFS
[2025-06-03 08:06:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:06:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:06:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:06:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:06:19] 2.11.2.0 28532 31481 89208 146729 3 210 20571187 25165824 4632 130560 0 16471203 99.780 18996060 2565 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:06:19] CVMFS is ok
[2025-06-03 08:06:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:06:19] Checking for apptainer binary...
[2025-06-03 08:06:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:06:19] Running /usr/bin/apptainer --version
[2025-06-03 08:06:19] apptainer version 1.3.2-1.el7
[2025-06-03 08:06:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:47:17] cg-vwn472.simple-grid.lan
[2025-06-03 08:47:17] apptainer works
[2025-06-03 08:47:17] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:47:17] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:47:18] Starting ATLAS job with PandaID=6677394007
[2025-06-03 08:47:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:41:32]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:41:32] 2025-06-03 10:03:39,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:41:32] 2025-06-03 10:03:39,865 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:41:32] 2025-06-03 10:03:39,866 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 13:41:32] 2025-06-03 10:03:39,867 | INFO     | sum of deviations: -17166996461.50001
[2025-06-03 13:41:32] 2025-06-03 10:03:39,867 | INFO     | mean x: 1748939098.5
[2025-06-03 13:41:32] 2025-06-03 10:03:39,867 | INFO     | mean y: 2498873.1842105263
[2025-06-03 13:41:32] 2025-06-03 10:03:39,867 | INFO     | -- intersect: 14119479152.6104
[2025-06-03 13:41:32] 2025-06-03 10:03:39,868 | INFO     | intersect: 14119479152.6104
[2025-06-03 13:41:32] 2025-06-03 10:03:39,868 | INFO     | chi2: 2.8700652555304473
[2025-06-03 13:41:32] 2025-06-03 10:03:39,868 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 13:41:32] 2025-06-03 10:03:39,870 | INFO     | sum of deviations: -3493133828.9999943
[2025-06-03 13:41:32] 2025-06-03 10:03:39,870 | INFO     | mean x: 1748938946.0
[2025-06-03 13:41:32] 2025-06-03 10:03:39,870 | INFO     | mean y: 2511363.9945945945
[2025-06-03 13:41:32] 2025-06-03 10:03:39,870 | INFO     | -- intersect: 3114291856.6270976
[2025-06-03 13:41:32] 2025-06-03 10:03:39,870 | INFO     | intersect: 3114291856.6270976
[2025-06-03 13:41:32] 2025-06-03 10:03:39,871 | INFO     | chi2: 2.031022354327882
[2025-06-03 13:41:32] 2025-06-03 10:03:39,871 | INFO     | current chi2=2.031022354327882 (change=29.234279589489443 %)
[2025-06-03 13:41:32] 2025-06-03 10:03:39,871 | INFO     | sum of square deviations: 1808350185.0
[2025-06-03 13:41:32] 2025-06-03 10:03:39,872 | INFO     | sum of deviations: -3177099478.0000014
[2025-06-03 13:41:32] 2025-06-03 10:03:39,873 | INFO     | mean x: 1748938793.5
[2025-06-03 13:41:32] 2025-06-03 10:03:39,873 | INFO     | mean y: 2511675.1666666665
[2025-06-03 13:41:32] 2025-06-03 10:03:39,873 | INFO     | -- intersect: 3075230982.5074635
[2025-06-03 13:41:32] 2025-06-03 10:03:39,873 | INFO     | intersect: 3075230982.5074635
[2025-06-03 13:41:32] 2025-06-03 10:03:39,873 | INFO     | chi2: 2.031141432804727
[2025-06-03 13:41:32] 2025-06-03 10:03:39,873 | INFO     | current chi2=2.031141432804727 (change=-0.005862982088379368 %)
[2025-06-03 13:41:32] 2025-06-03 10:03:39,874 | INFO     | right removable region: 179
[2025-06-03 13:41:32] 2025-06-03 10:03:39,874 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 13:41:32] 2025-06-03 10:03:39,881 | INFO     | sum of deviations: -52530491478.0
[2025-06-03 13:41:32] 2025-06-03 10:03:39,881 | INFO     | mean x: 1748939251.0
[2025-06-03 13:41:32] 2025-06-03 10:03:39,881 | INFO     | mean y: 2531547.172972973
[2025-06-03 13:41:32] 2025-06-03 10:03:39,881 | INFO     | -- intersect: 46798158384.93615
[2025-06-03 13:41:32] 2025-06-03 10:03:39,881 | INFO     | intersect: 46798158384.93615
[2025-06-03 13:41:32] 2025-06-03 10:03:39,881 | INFO     | chi2: 1.0704505874295136
[2025-06-03 13:41:32] 2025-06-03 10:03:39,882 | INFO     | current chi2=1.0704505874295136 (change=62.70291815258145 %)
[2025-06-03 13:41:32] 2025-06-03 10:03:39,882 | INFO     | sum of square deviations: 1808350185.0
[2025-06-03 13:41:32] 2025-06-03 10:03:39,883 | INFO     | sum of deviations: -51303522654.99999
[2025-06-03 13:41:32] 2025-06-03 10:03:39,883 | INFO     | mean x: 1748939403.5
[2025-06-03 13:41:32] 2025-06-03 10:03:39,884 | INFO     | mean y: 2530287.9444444445
[2025-06-03 13:41:32] 2025-06-03 10:03:39,884 | INFO     | -- intersect: 49620548442.80996
[2025-06-03 13:41:32] 2025-06-03 10:03:39,884 | INFO     | intersect: 49620548442.80996
[2025-06-03 13:41:32] 2025-06-03 10:03:39,884 | INFO     | chi2: 1.0538725236560693
[2025-06-03 13:41:32] 2025-06-03 10:03:39,884 | INFO     | current chi2=1.0538725236560693 (change=1.5486995820380087 %)
[2025-06-03 13:41:32] 2025-06-03 10:03:39,884 | INFO     | left removable region: 20
[2025-06-03 13:41:32] 2025-06-03 10:03:39,885 | INFO     | sum of square deviations: 1246386160.0
[2025-06-03 13:41:32] 2025-06-03 10:03:39,886 | INFO     | sum of deviations: -26321499573.00001
[2025-06-03 13:41:32] 2025-06-03 10:03:39,886 | INFO     | mean x: 1748939373.0
[2025-06-03 13:41:32] 2025-06-03 10:03:39,886 | INFO     | mean y: 2534057.3018867923
[2025-06-03 13:41:32] 2025-06-03 10:03:39,886 | INFO     | -- intersect: 36937080056.77159
[2025-06-03 13:41:32] 2025-06-03 10:03:39,886 | INFO     | intersect: 36937080056.77159
[2025-06-03 13:41:32] 2025-06-03 10:03:39,887 | INFO     | chi2: 0.1608406989702073
[2025-06-03 13:41:32] 2025-06-03 10:03:39,887 | INFO     | -- intersect: 36937080056.77159
[2025-06-03 13:41:32] 2025-06-03 10:03:39,887 | INFO     | current memory leak: -21.12 B/s (using 159 data points, chi2=0.16)
[2025-06-03 13:41:32] 2025-06-03 10:03:39,888 | INFO     | ..............................
[2025-06-03 13:41:32] 2025-06-03 10:03:39,888 | INFO     | . Timing measurements:
[2025-06-03 13:41:32] 2025-06-03 10:03:39,888 | INFO     | . get job = 0 s
[2025-06-03 13:41:32] 2025-06-03 10:03:39,888 | INFO     | . initial setup = 2 s
[2025-06-03 13:41:32] 2025-06-03 10:03:39,888 | INFO     | . payload setup = 24 s
[2025-06-03 13:41:32] 2025-06-03 10:03:39,888 | INFO     | . stage-in = 0 s
[2025-06-03 13:41:32] 2025-06-03 10:03:39,888 | INFO     | . payload execution = 11605 s
[2025-06-03 13:41:32] 2025-06-03 10:03:39,888 | INFO     | . stage-out = 3 s
[2025-06-03 13:41:32] 2025-06-03 10:03:39,889 | INFO     | . log creation = 1 s
[2025-06-03 13:41:32] 2025-06-03 10:03:39,889 | INFO     | ..............................
[2025-06-03 13:41:32] 2025-06-03 10:03:40,272 | INFO     | 
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | job summary report
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | --------------------------------------------------
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | PanDA job id: 6677394007
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | task id: 45006595
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | errors: (none)
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | pilot state: finished 
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | transexitcode: 0
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | exeerrorcode: 0
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | exeerrordiag: 
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | exitcode: 0
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | exitmsg: OK
[2025-06-03 13:41:32] 2025-06-03 10:03:40,273 | INFO     | cpuconsumptiontime: 43318 s
[2025-06-03 13:41:32] 2025-06-03 10:03:40,274 | INFO     | nevents: 400
[2025-06-03 13:41:32] 2025-06-03 10:03:40,274 | INFO     | neventsw: 0
[2025-06-03 13:41:32] 2025-06-03 10:03:40,274 | INFO     | pid: 25927
[2025-06-03 13:41:32] 2025-06-03 10:03:40,274 | INFO     | pgrp: 25927
[2025-06-03 13:41:32] 2025-06-03 10:03:40,274 | INFO     | corecount: 8
[2025-06-03 13:41:32] 2025-06-03 10:03:40,274 | INFO     | event service: False
[2025-06-03 13:41:32] 2025-06-03 10:03:40,274 | INFO     | sizes: {0: 2404950, 1: 2405205, 2: 2405205, 10: 2405439, 12: 2405467, 11633: 2434248, 11634: 2434375, 11637: 2443372, 11641: 2443428, 11732: 2443598}
[2025-06-03 13:41:32] 2025-06-03 10:03:40,274 | INFO     | --------------------------------------------------
[2025-06-03 13:41:32] 2025-06-03 10:03:40,274 | INFO     | 
[2025-06-03 13:41:32] 2025-06-03 10:03:40,274 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 13:41:32] 2025-06-03 10:03:40,707 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,708 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,709 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:41:32] 2025-06-03 10:03:40,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,709 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:41:32] 2025-06-03 10:03:40,709 | INFO     | job 6677394007 has completed (purged errors)
[2025-06-03 13:41:32] 2025-06-03 10:03:40,710 | INFO     | overall cleanup function is called
[2025-06-03 13:41:32] 2025-06-03 10:03:41,718 | INFO     | --- collectZombieJob: --- 10, [25927]
[2025-06-03 13:41:32] 2025-06-03 10:03:41,719 | INFO     | zombie collector waiting for pid 25927
[2025-06-03 13:41:32] 2025-06-03 10:03:41,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:41:32] 2025-06-03 10:03:41,719 | INFO     | collected zombie processes
[2025-06-03 13:41:32] 2025-06-03 10:03:41,719 | INFO     | will attempt to kill all subprocesses of pid=25927
[2025-06-03 13:41:32] 2025-06-03 10:03:41,820 | INFO     | process IDs to be killed: [25927] (in reverse order)
[2025-06-03 13:41:32] 2025-06-03 10:03:42,369 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:41:32] 2025-06-03 10:03:42,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:41:32] 2025-06-03 10:03:42,373 | INFO     | did not find any defunct processes belonging to 25927
[2025-06-03 13:41:32] 2025-06-03 10:03:42,376 | INFO     | did not find any defunct processes belonging to 25927
[2025-06-03 13:41:32] 2025-06-03 10:03:42,376 | INFO     | ready for new job
[2025-06-03 13:41:32] 2025-06-03 10:03:42,377 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:41:32] 2025-06-03 10:03:42,379 | INFO     | **************************************
[2025-06-03 13:41:32] 2025-06-03 10:03:42,379 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:41:32] 2025-06-03 10:03:42,379 | INFO     | **************************************
[2025-06-03 13:41:32] 2025-06-03 10:03:42,379 | INFO     | 
[2025-06-03 13:41:32] 2025-06-03 10:03:42,380 | INFO     | pilot is running in a VM
[2025-06-03 13:41:32] 2025-06-03 10:03:42,380 | INFO     | architecture information:
[2025-06-03 13:41:32] 2025-06-03 10:03:42,380 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:41:32] 2025-06-03 10:03:42,515 | INFO     | cat /etc/os-release:
[2025-06-03 13:41:32] NAME="CentOS Linux"
[2025-06-03 13:41:32] VERSION="7 (Core)"
[2025-06-03 13:41:32] ID="centos"
[2025-06-03 13:41:32] ID_LIKE="rhel fedora"
[2025-06-03 13:41:32] VERSION_ID="7"
[2025-06-03 13:41:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:41:32] ANSI_COLOR="0;31"
[2025-06-03 13:41:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:41:32] HOME_URL="https://www.centos.org/"
[2025-06-03 13:41:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:41:32] 
[2025-06-03 13:41:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:41:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:41:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:41:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:41:32] 
[2025-06-03 13:41:32] 2025-06-03 10:03:42,516 | INFO     | **************************************
[2025-06-03 13:41:32] 2025-06-03 10:03:43,019 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 13:41:32] 2025-06-03 10:03:43,286 | INFO     | sufficient remaining disk space (497080598528 B)
[2025-06-03 13:41:32] 2025-06-03 10:03:43,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:41:32] 2025-06-03 10:03:43,287 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:41:32] 2025-06-03 10:03:43,287 | INFO     | update_server=False
[2025-06-03 13:41:32] 2025-06-03 10:03:43,287 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:41:32] 2025-06-03 10:03:43,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:41:32] 2025-06-03 10:03:43,647 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 13:41:32] 2025-06-03 10:03:43,647 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 13:41:32] 2025-06-03 10:03:43,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:41:32] 2025-06-03 10:03:43,648 | INFO     | will abort loop
[2025-06-03 13:41:32] 2025-06-03 10:03:44,047 | INFO     | all data control threads have been joined
[2025-06-03 13:41:32] 2025-06-03 10:03:44,354 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:44,355 | INFO     | all job control threads have been joined
[2025-06-03 13:41:32] 2025-06-03 10:03:44,454 | INFO     | all payload control threads have been joined
[2025-06-03 13:41:32] 2025-06-03 10:03:44,489 | INFO     | PID=17388 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 13:41:32] 2025-06-03 10:03:44,489 | INFO     | .. there are 9 such processes running
[2025-06-03 13:41:32] 2025-06-03 10:03:44,490 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:41:32] 2025-06-03 10:03:44,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:41:32] 2025-06-03 10:03:44,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:41:32] 2025-06-03 10:03:44,515 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:41:32] 2025-06-03 10:03:44,583 | INFO     | [job] validate thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:44,613 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:44,652 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:44,799 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:44,866 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:45,053 | INFO     | [data] control thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:45,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:41:32] 2025-06-03 10:03:45,267 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:45,361 | INFO     | [job] control thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:45,440 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:45,460 | INFO     | [payload] control thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:45,624 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:45,782 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:46,066 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:48,524 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:54,152 | INFO     | job.realtimelogging is not enabled
[2025-06-03 13:41:32] 2025-06-03 10:03:55,158 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:41:32] 2025-06-03 10:03:56,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280546010944)>', '<ExcThread(monitor, started 140280116266752)>']
[2025-06-03 13:41:32] 2025-06-03 10:03:56,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:41:32] 2025-06-03 10:03:56,561 | INFO     | [monitor] control thread has ended
[2025-06-03 13:41:32] 2025-06-03 10:04:01,192 | INFO     | all workflow threads have been joined
[2025-06-03 13:41:32] 2025-06-03 10:04:01,193 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:41:32] 2025-06-03 10:04:01,193 | INFO     | traces error code: 0
[2025-06-03 13:41:32] 2025-06-03 10:04:01,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:41:32] 2025-06-03 10:04:01,693 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:41:32] 2025-06-03 10:04:01,791 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:41:32] 2025-06-03 10:04:01,883 [wrapper] pilotpid: 17388
[2025-06-03 13:41:32] 2025-06-03 10:04:01,974 [wrapper] Pilot exit status: 0
[2025-06-03 13:41:32] 2025-06-03 10:04:02,475 [wrapper] pandaids: 6677394007
[2025-06-03 13:41:32] 2025-06-03 10:04:02,985 [wrapper] cleanup supervisor_pilot 25058 17389
[2025-06-03 13:41:32] 2025-06-03 10:04:03,037 [wrapper] Test setup, not cleaning
[2025-06-03 13:41:32] 2025-06-03 10:04:03,084 [wrapper] apfmon messages muted
[2025-06-03 13:41:32] 2025-06-03 10:04:03,142 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:41:32] 2025-06-03 10:04:03,241 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:41:32]  *** Error codes and diagnostics ***
[2025-06-03 13:41:32]     "exeErrorCode": 0,
[2025-06-03 13:41:32]     "exeErrorDiag": "",
[2025-06-03 13:41:32]     "pilotErrorCode": 0,
[2025-06-03 13:41:32]     "pilotErrorDiag": "",
[2025-06-03 13:41:32]  *** Listing of results directory ***
[2025-06-03 13:41:32] total 385232
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:02 pilot3.tar.gz
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:14 queuedata.json
[2025-06-03 13:41:32] -rwx------. 1 boinc boinc     37140 Jun  2 21:14 runpilot2-wrapper.sh
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:41:32] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:06 run_atlas
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:06 job.xml
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc      6392 Jun  3 08:06 init_data.xml
[2025-06-03 13:41:32] -rw-r--r--. 2 boinc boinc 213652944 Jun  3 08:06 EVNT.45006593._000358.pool.root.1
[2025-06-03 13:41:32] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:06 start_atlas.sh
[2025-06-03 13:41:32] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:06 shared
[2025-06-03 13:41:32] -rw-r--r--. 2 boinc boinc    508867 Jun  3 08:06 input.tar.gz
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:06 boinc_lockfile
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc      2521 Jun  3 08:47 pandaJob.out
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc    986901 Jun  3 08:47 agis_schedconf.cvmfs.json
[2025-06-03 13:41:32] drwx------. 4 boinc boinc      4096 Jun  3 08:47 pilot3
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc 174232351 Jun  3 12:00 HITS.45006595._008935.pool.root.1
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc       531 Jun  3 12:01 boinc_task_state.xml
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc      1029 Jun  3 12:01 memory_monitor_summary.json
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc   1603667 Jun  3 12:02 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc    358799 Jun  3 12:02 log.45006595._008935.job.log.tgz.1
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc        95 Jun  3 12:02 pilot_heartbeat.json
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc      7690 Jun  3 12:03 heartbeat.json
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc      5066 Jun  3 12:04 pilotlog.txt
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc   1025681 Jun  3 12:04 log.45006595._008935.job.log.1
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc       357 Jun  3 12:04 output.list
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:04 runtime_log
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc   1402880 Jun  3 12:04 result.tar.gz
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc      8659 Jun  3 12:04 runtime_log.err
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc       656 Jun  3 12:04 JXmKDm6mPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVFgKDmtV1fhm.diag
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc      8192 Jun  3 13:41 boinc_mmap_file
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc        28 Jun  3 13:41 wrapper_checkpoint.txt
[2025-06-03 13:41:32] -rw-r--r--. 1 boinc boinc     20595 Jun  3 13:41 stderr.txt
[2025-06-03 13:41:32] HITS file was successfully produced:
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc 174232351 Jun  3 12:00 shared/HITS.pool.root.1
[2025-06-03 13:41:32]  *** Contents of shared directory: ***
[2025-06-03 13:41:32] total 380688
[2025-06-03 13:41:32] -rw-r--r--. 2 boinc boinc 213652944 Jun  3 08:06 ATLAS.root_0
[2025-06-03 13:41:32] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:06 start_atlas.sh
[2025-06-03 13:41:32] -rw-r--r--. 2 boinc boinc    508867 Jun  3 08:06 input.tar.gz
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc 174232351 Jun  3 12:00 HITS.pool.root.1
[2025-06-03 13:41:32] -rw-------. 1 boinc boinc   1402880 Jun  3 12:04 result.tar.gz
13:41:34 (22517): run_atlas exited; CPU time 43453.532843
13:41:34 (22517): called boinc_finish(0)

</stderr_txt>
]]>

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