Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:23:04 (70454): wrapper (7.7.26015): starting
18:23:04 (70454): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 18:23:04] Arguments: --nthreads 8
[2025-06-02 18:23:04] Threads: 8
[2025-06-02 18:23:04] Checking for CVMFS
[2025-06-02 18:23:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 18:23:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 18:23:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 18:23:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 18:23:05] 2.11.2.0 73730 8700 297304 146722 0 198 17083275 18432000 21649 130560 0 64642716 99.282 98306093 72583 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-02 18:23:05] CVMFS is ok
[2025-06-02 18:23:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 18:23:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 18:23:05] Further information can be found at the LHC@home message board.
[2025-06-02 18:23:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 18:23:05] Checking for apptainer binary...
[2025-06-02 18:23:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 18:23:05] Running /usr/bin/apptainer --version
[2025-06-02 18:23:05] apptainer version 1.3.2-1.el7
[2025-06-02 18:23:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 18:23:10] c-212-10.aglt2.org
[2025-06-02 18:23:10] apptainer works
[2025-06-02 18:23:10] Set ATHENA_PROC_NUMBER=8
[2025-06-02 18:23:10] Set ATHENA_CORE_NUMBER=8
[2025-06-02 18:23:10] Starting ATLAS job with PandaID=6677388797
[2025-06-02 18:23:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 21:18:12]  *** The last 200 lines of the pilot log: ***
[2025-06-02 21:18:12] 2025-06-03 01:17:56,110 | INFO     | mean x: 1748908290.0754716
[2025-06-02 21:18:12] 2025-06-03 01:17:56,110 | INFO     | mean y: 2319681.6981132077
[2025-06-02 21:18:12] 2025-06-03 01:17:56,110 | INFO     | -- intersect: -159980356954.59384
[2025-06-02 21:18:12] 2025-06-03 01:17:56,111 | INFO     | intersect: -159980356954.59384
[2025-06-02 21:18:12] 2025-06-03 01:17:56,111 | INFO     | chi2: 9.328266690284428
[2025-06-02 21:18:12] 2025-06-03 01:17:56,111 | INFO     | current chi2=9.328266690284428 (change=-0.2539062132108791 %)
[2025-06-02 21:18:12] 2025-06-03 01:17:56,111 | INFO     | right removable region: 158
[2025-06-02 21:18:12] 2025-06-03 01:17:56,111 | INFO     | sum of square deviations: 1246367999.0943365
[2025-06-02 21:18:12] 2025-06-03 01:17:56,112 | INFO     | sum of deviations: 61903445690.39619
[2025-06-02 21:18:12] 2025-06-03 01:17:56,112 | INFO     | mean x: 1748908595.0754716
[2025-06-02 21:18:12] 2025-06-03 01:17:56,112 | INFO     | mean y: 2395318.3836477986
[2025-06-02 21:18:12] 2025-06-03 01:17:56,112 | INFO     | -- intersect: -86860768940.80011
[2025-06-02 21:18:12] 2025-06-03 01:17:56,112 | INFO     | intersect: -86860768940.80011
[2025-06-02 21:18:12] 2025-06-03 01:17:56,112 | INFO     | chi2: 3.6026059121690914
[2025-06-02 21:18:12] 2025-06-03 01:17:56,112 | INFO     | current chi2=3.6026059121690914 (change=61.28162634780476 %)
[2025-06-02 21:18:12] 2025-06-03 01:17:56,113 | INFO     | sum of square deviations: 1132436621.5649304
[2025-06-02 21:18:12] 2025-06-03 01:17:56,113 | INFO     | sum of deviations: 16931005905.058447
[2025-06-02 21:18:12] 2025-06-03 01:17:56,114 | INFO     | mean x: 1748908747.577922
[2025-06-02 21:18:12] 2025-06-03 01:17:56,114 | INFO     | mean y: 2455422.3701298703
[2025-06-02 21:18:12] 2025-06-03 01:17:56,114 | INFO     | -- intersect: -26145395829.323414
[2025-06-02 21:18:12] 2025-06-03 01:17:56,114 | INFO     | intersect: -26145395829.323414
[2025-06-02 21:18:12] 2025-06-03 01:17:56,114 | INFO     | chi2: 0.36691090028474777
[2025-06-02 21:18:12] 2025-06-03 01:17:56,114 | INFO     | current chi2=0.36691090028474777 (change=89.81540281590681 %)
[2025-06-02 21:18:12] 2025-06-03 01:17:56,114 | INFO     | sum of square deviations: 1025668169.0335563
[2025-06-02 21:18:12] 2025-06-03 01:17:56,115 | INFO     | sum of deviations: 2150258740.7248316
[2025-06-02 21:18:12] 2025-06-03 01:17:56,115 | INFO     | mean x: 1748908900.0805368
[2025-06-02 21:18:12] 2025-06-03 01:17:56,115 | INFO     | mean y: 2476421.9395973156
[2025-06-02 21:18:12] 2025-06-03 01:17:56,115 | INFO     | -- intersect: -3664018027.891176
[2025-06-02 21:18:12] 2025-06-03 01:17:56,115 | INFO     | intersect: -3664018027.891176
[2025-06-02 21:18:12] 2025-06-03 01:17:56,115 | INFO     | chi2: 0.021067840857015706
[2025-06-02 21:18:12] 2025-06-03 01:17:56,115 | INFO     | current chi2=0.021067840857015706 (change=94.25804988604438 %)
[2025-06-02 21:18:12] 2025-06-03 01:17:56,116 | INFO     | sum of square deviations: 925830078.9999982
[2025-06-02 21:18:12] 2025-06-03 01:17:56,116 | INFO     | sum of deviations: -15896425.333333366
[2025-06-02 21:18:12] 2025-06-03 01:17:56,116 | INFO     | mean x: 1748909052.5833333
[2025-06-02 21:18:12] 2025-06-03 01:17:56,116 | INFO     | mean y: 2479672.361111111
[2025-06-02 21:18:12] 2025-06-03 01:17:56,116 | INFO     | -- intersect: 32508295.107101854
[2025-06-02 21:18:12] 2025-06-03 01:17:56,116 | INFO     | intersect: 32508295.107101854
[2025-06-02 21:18:12] 2025-06-03 01:17:56,117 | INFO     | chi2: 0.003288871372871322
[2025-06-02 21:18:12] 2025-06-03 01:17:56,117 | INFO     | current chi2=0.003288871372871322 (change=84.38913890041033 %)
[2025-06-02 21:18:12] 2025-06-03 01:17:56,117 | INFO     | sum of square deviations: 832689788.9640276
[2025-06-02 21:18:12] 2025-06-03 01:17:56,118 | INFO     | sum of deviations: -41086527.2302158
[2025-06-02 21:18:12] 2025-06-03 01:17:56,118 | INFO     | mean x: 1748909205.086331
[2025-06-02 21:18:12] 2025-06-03 01:17:56,118 | INFO     | mean y: 2479705.3525179857
[2025-06-02 21:18:12] 2025-06-03 01:17:56,118 | INFO     | -- intersect: 88774273.42612605
[2025-06-02 21:18:12] 2025-06-03 01:17:56,118 | INFO     | intersect: 88774273.42612605
[2025-06-02 21:18:12] 2025-06-03 01:17:56,118 | INFO     | chi2: 0.003161711451197345
[2025-06-02 21:18:12] 2025-06-03 01:17:56,118 | INFO     | current chi2=0.003161711451197345 (change=3.8663695613903313 %)
[2025-06-02 21:18:12] 2025-06-03 01:17:56,118 | INFO     | left removable region: 50
[2025-06-02 21:18:12] 2025-06-03 01:17:56,118 | INFO     | sum of square deviations: 390560078.2499988
[2025-06-02 21:18:12] 2025-06-03 01:17:56,119 | INFO     | sum of deviations: 1240322369.2500002
[2025-06-02 21:18:12] 2025-06-03 01:17:56,119 | INFO     | mean x: 1748909784.5833333
[2025-06-02 21:18:12] 2025-06-03 01:17:56,119 | INFO     | mean y: 2476398.9166666665
[2025-06-02 21:18:12] 2025-06-03 01:17:56,119 | INFO     | -- intersect: -5551629226.365361
[2025-06-02 21:18:12] 2025-06-03 01:17:56,119 | INFO     | intersect: -5551629226.365361
[2025-06-02 21:18:12] 2025-06-03 01:17:56,119 | INFO     | chi2: 9.58238808630848e-05
[2025-06-02 21:18:12] 2025-06-03 01:17:56,119 | INFO     | -- intersect: -5551629226.365361
[2025-06-02 21:18:12] 2025-06-03 01:17:56,119 | INFO     | current memory leak: 3.18 B/s (using 108 data points, chi2=0.00)
[2025-06-02 21:18:12] 2025-06-03 01:17:56,120 | INFO     | ..............................
[2025-06-02 21:18:12] 2025-06-03 01:17:56,120 | INFO     | . Timing measurements:
[2025-06-02 21:18:12] 2025-06-03 01:17:56,120 | INFO     | . get job = 0 s
[2025-06-02 21:18:12] 2025-06-03 01:17:56,120 | INFO     | . initial setup = 6 s
[2025-06-02 21:18:12] 2025-06-03 01:17:56,120 | INFO     | . payload setup = 138 s
[2025-06-02 21:18:12] 2025-06-03 01:17:56,120 | INFO     | . stage-in = 0 s
[2025-06-02 21:18:12] 2025-06-03 01:17:56,120 | INFO     | . payload execution = 10089 s
[2025-06-02 21:18:12] 2025-06-03 01:17:56,120 | INFO     | . stage-out = 1 s
[2025-06-02 21:18:12] 2025-06-03 01:17:56,120 | INFO     | . log creation = 0 s
[2025-06-02 21:18:12] 2025-06-03 01:17:56,120 | INFO     | ..............................
[2025-06-02 21:18:12] 2025-06-03 01:17:56,209 | INFO     | 
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | job summary report
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | --------------------------------------------------
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | PanDA job id: 6677388797
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | task id: 45006595
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | errors: (none)
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | pilot state: finished 
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | transexitcode: 0
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | exeerrorcode: 0
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | exeerrordiag: 
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | exitcode: 0
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | exitmsg: OK
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | cpuconsumptiontime: 30728 s
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | nevents: 400
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | neventsw: 0
[2025-06-02 21:18:12] 2025-06-03 01:17:56,210 | INFO     | pid: 3226
[2025-06-02 21:18:12] 2025-06-03 01:17:56,211 | INFO     | pgrp: 3226
[2025-06-02 21:18:12] 2025-06-03 01:17:56,211 | INFO     | corecount: 8
[2025-06-02 21:18:12] 2025-06-03 01:17:56,211 | INFO     | event service: False
[2025-06-02 21:18:12] 2025-06-03 01:17:56,211 | INFO     | sizes: {0: 2405177, 1: 2405177, 12: 2405205, 23: 2405233, 34: 2405261, 45: 2405289, 55: 2405445, 60: 2405679, 66: 2405707, 10232: 2434216, 10233: 2443157, 10234: 2
[2025-06-02 21:18:12] 2025-06-03 01:17:56,211 | INFO     | --------------------------------------------------
[2025-06-02 21:18:12] 2025-06-03 01:17:56,211 | INFO     | 
[2025-06-02 21:18:12] 2025-06-03 01:17:56,211 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-02 21:18:12] 2025-06-03 01:17:56,234 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,234 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,234 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,234 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,234 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 21:18:12] 2025-06-03 01:17:56,235 | INFO     | job 6677388797 has completed (purged errors)
[2025-06-02 21:18:12] 2025-06-03 01:17:56,236 | INFO     | overall cleanup function is called
[2025-06-02 21:18:12] 2025-06-03 01:17:57,243 | INFO     | --- collectZombieJob: --- 10, [3226]
[2025-06-02 21:18:12] 2025-06-03 01:17:57,243 | INFO     | zombie collector waiting for pid 3226
[2025-06-02 21:18:12] 2025-06-03 01:17:57,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 21:18:12] 2025-06-03 01:17:57,243 | INFO     | collected zombie processes
[2025-06-02 21:18:12] 2025-06-03 01:17:57,243 | INFO     | will attempt to kill all subprocesses of pid=3226
[2025-06-02 21:18:12] 2025-06-03 01:17:57,635 | INFO     | process IDs to be killed: [3226] (in reverse order)
[2025-06-02 21:18:12] 2025-06-03 01:17:57,981 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 21:18:12] 2025-06-03 01:17:57,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 21:18:12] 2025-06-03 01:17:57,989 | INFO     | did not find any defunct processes belonging to 3226
[2025-06-02 21:18:12] 2025-06-03 01:17:57,996 | INFO     | did not find any defunct processes belonging to 3226
[2025-06-02 21:18:12] 2025-06-03 01:17:57,996 | INFO     | ready for new job
[2025-06-02 21:18:12] 2025-06-03 01:17:57,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 21:18:12] 2025-06-03 01:17:57,998 | INFO     | **************************************
[2025-06-02 21:18:12] 2025-06-03 01:17:57,998 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 21:18:12] 2025-06-03 01:17:57,998 | INFO     | **************************************
[2025-06-02 21:18:12] 2025-06-03 01:17:57,998 | INFO     | 
[2025-06-02 21:18:12] 2025-06-03 01:17:58,003 | INFO     | architecture information:
[2025-06-02 21:18:12] 2025-06-03 01:17:58,003 | INFO     | executing command: cat /etc/os-release
[2025-06-02 21:18:12] 2025-06-03 01:17:58,059 | INFO     | cat /etc/os-release:
[2025-06-02 21:18:12] NAME="CentOS Linux"
[2025-06-02 21:18:12] VERSION="7 (Core)"
[2025-06-02 21:18:12] ID="centos"
[2025-06-02 21:18:12] ID_LIKE="rhel fedora"
[2025-06-02 21:18:12] VERSION_ID="7"
[2025-06-02 21:18:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 21:18:12] ANSI_COLOR="0;31"
[2025-06-02 21:18:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 21:18:12] HOME_URL="https://www.centos.org/"
[2025-06-02 21:18:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 21:18:12] 
[2025-06-02 21:18:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 21:18:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 21:18:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 21:18:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 21:18:12] 
[2025-06-02 21:18:12] 2025-06-03 01:17:58,060 | INFO     | **************************************
[2025-06-02 21:18:12] 2025-06-03 01:17:58,563 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-02 21:18:12] 2025-06-03 01:17:58,575 | INFO     | sufficient remaining disk space (103531151360 B)
[2025-06-02 21:18:12] 2025-06-03 01:17:58,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 21:18:12] 2025-06-03 01:17:58,576 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 21:18:12] 2025-06-03 01:17:58,576 | INFO     | update_server=False
[2025-06-02 21:18:12] 2025-06-03 01:17:58,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 21:18:12] 2025-06-03 01:17:58,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 21:18:12] 2025-06-03 01:17:58,576 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 21:18:12] 2025-06-03 01:17:58,577 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 21:18:12] 2025-06-03 01:17:58,577 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 21:18:12] 2025-06-03 01:17:58,577 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 21:18:12] 2025-06-03 01:17:58,675 | INFO     | all payload control threads have been joined
[2025-06-02 21:18:12] 2025-06-03 01:17:58,715 | INFO     | all job control threads have been joined
[2025-06-02 21:18:12] 2025-06-03 01:17:59,177 | INFO     | all data control threads have been joined
[2025-06-02 21:18:12] 2025-06-03 01:17:59,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 21:18:12] 2025-06-03 01:17:59,562 | INFO     | aborting loop
[2025-06-02 21:18:12] 2025-06-03 01:17:59,582 | INFO     | [job] retrieve thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:17:59,681 | INFO     | [payload] control thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:17:59,710 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:17:59,721 | INFO     | [job] control thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:17:59,771 | INFO     | [data] copytool_in thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:18:00,183 | INFO     | [data] control thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:18:00,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:18:00,441 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:18:00,441 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:18:00,446 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 21:18:12] 2025-06-03 01:18:00,447 | INFO     | [payload] failed_post thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:18:00,568 | INFO     | [job] job monitor thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:18:00,582 | INFO     | [data] copytool_out thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:18:00,701 | INFO     | [job] validate thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:18:00,826 | INFO     | [payload] validate_post thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:18:01,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 21:18:12] 2025-06-03 01:18:02,224 | INFO     | [job] queue monitor thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:18:04,459 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 21:18:12] 2025-06-03 01:18:05,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975206418240)>', '<ExcThread(monitor, started 139974762542848)>']
[2025-06-02 21:18:12] 2025-06-03 01:18:06,623 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 21:18:12] 2025-06-03 01:18:06,623 | INFO     | [monitor] control thread has ended
[2025-06-02 21:18:12] 2025-06-03 01:18:10,897 | INFO     | all workflow threads have been joined
[2025-06-02 21:18:12] 2025-06-03 01:18:10,897 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 21:18:12] 2025-06-03 01:18:10,898 | INFO     | traces error code: 0
[2025-06-02 21:18:12] 2025-06-03 01:18:10,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 21:18:12] 2025-06-03 01:18:11,383 [wrapper] ==== pilot stdout END ====
[2025-06-02 21:18:12] 2025-06-03 01:18:11,388 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 21:18:12] 2025-06-03 01:18:11,390 [wrapper] pilotpid: 83299
[2025-06-02 21:18:12] 2025-06-03 01:18:11,392 [wrapper] Pilot exit status: 0
[2025-06-02 21:18:12] 2025-06-03 01:18:11,409 [wrapper] pandaids: 6677388797
[2025-06-02 21:18:12] 2025-06-03 01:18:11,488 [wrapper] cleanup supervisor_pilot 16161 83300
[2025-06-02 21:18:12] 2025-06-03 01:18:11,491 [wrapper] Test setup, not cleaning
[2025-06-02 21:18:12] 2025-06-03 01:18:11,494 [wrapper] apfmon messages muted
[2025-06-02 21:18:12] 2025-06-03 01:18:11,496 [wrapper] ==== wrapper stdout END ====
[2025-06-02 21:18:12] 2025-06-03 01:18:11,498 [wrapper] ==== wrapper stderr END ====
[2025-06-02 21:18:12]  *** Error codes and diagnostics ***
[2025-06-02 21:18:12]     "exeErrorCode": 0,
[2025-06-02 21:18:12]     "exeErrorDiag": "",
[2025-06-02 21:18:12]     "pilotErrorCode": 0,
[2025-06-02 21:18:12]     "pilotErrorDiag": "",
[2025-06-02 21:18:12]  *** Listing of results directory ***
[2025-06-02 21:18:12] total 387876
[2025-06-02 21:18:12] -rwx------ 1 boincer umatlas     37140 Jun  2 13:47 runpilot2-wrapper.sh
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas      5111 Jun  2 13:47 queuedata.json
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas    495897 Jun  2 13:47 pilot3.tar.gz
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas       100 Jun  2 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 21:18:12] -rwxr-xr-x 1 boincer umatlas      7986 Jun  2 18:22 run_atlas
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas       105 Jun  2 18:22 job.xml
[2025-06-02 21:18:12] -rw-r--r-- 2 boincer umatlas 212135956 Jun  2 18:23 EVNT.45006593._000246.pool.root.1
[2025-06-02 21:18:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  2 18:23 start_atlas.sh
[2025-06-02 21:18:12] drwxrwx--x 2 boincer umatlas      4096 Jun  2 18:23 shared
[2025-06-02 21:18:12] -rw-r--r-- 2 boincer umatlas    508868 Jun  2 18:23 input.tar.gz
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas         0 Jun  2 18:23 boinc_lockfile
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas      2521 Jun  2 18:23 pandaJob.out
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas    988091 Jun  2 18:25 agis_schedconf.cvmfs.json
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas   1603667 Jun  2 18:25 agis_ddmendpoints.agis.ALL.json
[2025-06-02 21:18:12] drwx------ 4 boincer umatlas      4096 Jun  2 18:25 pilot3
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas      6388 Jun  2 21:10 init_data.xml
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas 178669595 Jun  2 21:17 HITS.45006595._006135.pool.root.1
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas       531 Jun  2 21:17 boinc_task_state.xml
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas      1077 Jun  2 21:17 memory_monitor_summary.json
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas    353614 Jun  2 21:17 log.45006595._006135.job.log.tgz.1
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas        95 Jun  2 21:17 pilot_heartbeat.json
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas      7744 Jun  2 21:17 heartbeat.json
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas        28 Jun  2 21:18 wrapper_checkpoint.txt
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas      8192 Jun  2 21:18 boinc_mmap_file
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas      4477 Jun  2 21:18 pilotlog.txt
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas    914085 Jun  2 21:18 log.45006595._006135.job.log.1
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas       357 Jun  2 21:18 output.list
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas       620 Jun  2 21:18 runtime_log
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas   1290240 Jun  2 21:18 result.tar.gz
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas      8660 Jun  2 21:18 runtime_log.err
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas       661 Jun  2 21:18 A6JNDmyQOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm81VKDmCbrMhn.diag
[2025-06-02 21:18:12] -rw-r--r-- 1 boincer umatlas     20902 Jun  2 21:18 stderr.txt
[2025-06-02 21:18:12] HITS file was successfully produced:
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas 178669595 Jun  2 21:17 shared/HITS.pool.root.1
[2025-06-02 21:18:12]  *** Contents of shared directory: ***
[2025-06-02 21:18:12] total 383432
[2025-06-02 21:18:12] -rw-r--r-- 2 boincer umatlas 212135956 Jun  2 18:23 ATLAS.root_0
[2025-06-02 21:18:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  2 18:23 start_atlas.sh
[2025-06-02 21:18:12] -rw-r--r-- 2 boincer umatlas    508868 Jun  2 18:23 input.tar.gz
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas 178669595 Jun  2 21:17 HITS.pool.root.1
[2025-06-02 21:18:12] -rw------- 1 boincer umatlas   1290240 Jun  2 21:18 result.tar.gz
21:18:13 (70454): run_atlas exited; CPU time 30443.852214
21:18:13 (70454): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN