Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:57:23 (30143): wrapper (7.7.26015): starting
07:57:23 (30143): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:57:23] Arguments: --nthreads 8
[2025-06-03 07:57:23] Threads: 8
[2025-06-03 07:57:23] Checking for CVMFS
[2025-06-03 07:57:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:57:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:57:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:57:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:57:24] 2.11.2.0 7869 31389 89836 146729 0 210 23021597 25165825 3427 130560 0 15465037 99.776 18572186 1975 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 07:57:24] CVMFS is ok
[2025-06-03 07:57:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:57:24] Checking for apptainer binary...
[2025-06-03 07:57:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:57:24] Running /usr/bin/apptainer --version
[2025-06-03 07:57:24] apptainer version 1.3.2-1.el7
[2025-06-03 07:57:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:57:26] cg-vwn276.simple-grid.lan
[2025-06-03 07:57:26] apptainer works
[2025-06-03 07:57:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:57:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:57:26] Starting ATLAS job with PandaID=6677393392
[2025-06-03 07:57:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:02:13]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:02:14] 2025-06-03 09:42:10,162 | INFO     | .. there are 9 such processes running
[2025-06-03 12:02:14] 2025-06-03 09:42:10,665 | INFO     | monitor loop #967: job 0:6677393392 is in state 'finished'
[2025-06-03 12:02:14] 2025-06-03 09:42:10,665 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:02:14] 2025-06-03 09:42:13,179 | INFO     | monitor loop #968: job 0:6677393392 is in state 'finished'
[2025-06-03 12:02:14] 2025-06-03 09:42:13,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:02:14] 2025-06-03 09:42:13,818 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 12:02:14] 2025-06-03 09:42:13,818 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6677393392/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:02:14] 2025-06-03 09:42:13,819 | INFO     | extracted standard info from prmon json
[2025-06-03 12:02:14] 2025-06-03 09:42:13,820 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:02:14] 2025-06-03 09:42:13,820 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:02:14] 2025-06-03 09:42:13,820 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:02:14] 2025-06-03 09:42:13,820 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:02:14] 2025-06-03 09:42:13,825 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:02:14] 2025-06-03 09:42:13,825 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 12:02:14] 2025-06-03 09:42:13,827 | INFO     | sum of deviations: 59460869411.000015
[2025-06-03 12:02:14] 2025-06-03 09:42:13,833 | INFO     | mean x: 1748937094.5
[2025-06-03 12:02:14] 2025-06-03 09:42:13,833 | INFO     | mean y: 2433547.168224299
[2025-06-03 12:02:14] 2025-06-03 09:42:13,833 | INFO     | -- intersect: -34218762433.457123
[2025-06-03 12:02:14] 2025-06-03 09:42:13,833 | INFO     | intersect: -34218762433.457123
[2025-06-03 12:02:14] 2025-06-03 09:42:13,834 | INFO     | chi2: 5.102936202670261
[2025-06-03 12:02:14] 2025-06-03 09:42:13,834 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 12:02:14] 2025-06-03 09:42:13,836 | INFO     | sum of deviations: 71894600610.0
[2025-06-03 12:02:14] 2025-06-03 09:42:13,836 | INFO     | mean x: 1748936942.0
[2025-06-03 12:02:14] 2025-06-03 09:42:13,836 | INFO     | mean y: 2442464.688995215
[2025-06-03 12:02:14] 2025-06-03 09:42:13,836 | INFO     | -- intersect: -44415975556.68931
[2025-06-03 12:02:14] 2025-06-03 09:42:13,836 | INFO     | intersect: -44415975556.68931
[2025-06-03 12:02:14] 2025-06-03 09:42:13,837 | INFO     | chi2: 4.3761147145967545
[2025-06-03 12:02:14] 2025-06-03 09:42:13,837 | INFO     | current chi2=4.3761147145967545 (change=14.243201545282414 %)
[2025-06-03 12:02:14] 2025-06-03 09:42:13,837 | INFO     | right removable region: 208
[2025-06-03 12:02:14] 2025-06-03 09:42:13,837 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 12:02:14] 2025-06-03 09:42:13,839 | INFO     | sum of deviations: -7908280706.000002
[2025-06-03 12:02:14] 2025-06-03 09:42:13,839 | INFO     | mean x: 1748937247.0
[2025-06-03 12:02:14] 2025-06-03 09:42:13,839 | INFO     | mean y: 2482823.7033492825
[2025-06-03 12:02:14] 2025-06-03 09:42:13,839 | INFO     | -- intersect: 4888432206.664148
[2025-06-03 12:02:14] 2025-06-03 09:42:13,839 | INFO     | intersect: 4888432206.664148
[2025-06-03 12:02:14] 2025-06-03 09:42:13,839 | INFO     | chi2: 1.146349229416209
[2025-06-03 12:02:14] 2025-06-03 09:42:13,840 | INFO     | current chi2=1.146349229416209 (change=77.53549752755387 %)
[2025-06-03 12:02:14] 2025-06-03 09:42:13,840 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 12:02:14] 2025-06-03 09:42:13,841 | INFO     | sum of deviations: -21337582352.0
[2025-06-03 12:02:14] 2025-06-03 09:42:13,842 | INFO     | mean x: 1748937399.5
[2025-06-03 12:02:14] 2025-06-03 09:42:13,842 | INFO     | mean y: 2493027.8529411764
[2025-06-03 12:02:14] 2025-06-03 09:42:13,842 | INFO     | -- intersect: 14178730666.937178
[2025-06-03 12:02:14] 2025-06-03 09:42:13,842 | INFO     | intersect: 14178730666.937178
[2025-06-03 12:02:14] 2025-06-03 09:42:13,842 | INFO     | chi2: 0.8620345276012873
[2025-06-03 12:02:14] 2025-06-03 09:42:13,842 | INFO     | current chi2=0.8620345276012873 (change=24.80175277473795 %)
[2025-06-03 12:02:14] 2025-06-03 09:42:13,842 | INFO     | left removable region: 20
[2025-06-03 12:02:14] 2025-06-03 09:42:13,843 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 12:02:14] 2025-06-03 09:42:13,844 | INFO     | sum of deviations: 4515043862.5
[2025-06-03 12:02:14] 2025-06-03 09:42:13,844 | INFO     | mean x: 1748937521.5
[2025-06-03 12:02:14] 2025-06-03 09:42:13,844 | INFO     | mean y: 2493260.494680851
[2025-06-03 12:02:14] 2025-06-03 09:42:13,844 | INFO     | -- intersect: -3830134005.631381
[2025-06-03 12:02:14] 2025-06-03 09:42:13,844 | INFO     | intersect: -3830134005.631381
[2025-06-03 12:02:14] 2025-06-03 09:42:13,845 | INFO     | chi2: 0.0005703508397304299
[2025-06-03 12:02:14] 2025-06-03 09:42:13,845 | INFO     | -- intersect: -3830134005.631381
[2025-06-03 12:02:14] 2025-06-03 09:42:13,845 | INFO     | current memory leak: 2.19 B/s (using 188 data points, chi2=0.00)
[2025-06-03 12:02:14] 2025-06-03 09:42:13,846 | INFO     | ..............................
[2025-06-03 12:02:14] 2025-06-03 09:42:13,846 | INFO     | . Timing measurements:
[2025-06-03 12:02:14] 2025-06-03 09:42:13,846 | INFO     | . get job = 0 s
[2025-06-03 12:02:14] 2025-06-03 09:42:13,846 | INFO     | . initial setup = 4 s
[2025-06-03 12:02:14] 2025-06-03 09:42:13,846 | INFO     | . payload setup = 88 s
[2025-06-03 12:02:14] 2025-06-03 09:42:13,846 | INFO     | . stage-in = 0 s
[2025-06-03 12:02:14] 2025-06-03 09:42:13,846 | INFO     | . payload execution = 13172 s
[2025-06-03 12:02:14] 2025-06-03 09:42:13,846 | INFO     | . stage-out = 4 s
[2025-06-03 12:02:14] 2025-06-03 09:42:13,846 | INFO     | . log creation = 1 s
[2025-06-03 12:02:14] 2025-06-03 09:42:13,847 | INFO     | ..............................
[2025-06-03 12:02:14] 2025-06-03 09:42:14,099 | INFO     | 
[2025-06-03 12:02:14] 2025-06-03 09:42:14,099 | INFO     | job summary report
[2025-06-03 12:02:14] 2025-06-03 09:42:14,099 | INFO     | --------------------------------------------------
[2025-06-03 12:02:14] 2025-06-03 09:42:14,099 | INFO     | PanDA job id: 6677393392
[2025-06-03 12:02:14] 2025-06-03 09:42:14,099 | INFO     | task id: 45006595
[2025-06-03 12:02:14] 2025-06-03 09:42:14,099 | INFO     | errors: (none)
[2025-06-03 12:02:14] 2025-06-03 09:42:14,099 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:02:14] 2025-06-03 09:42:14,099 | INFO     | pilot state: finished 
[2025-06-03 12:02:14] 2025-06-03 09:42:14,100 | INFO     | transexitcode: 0
[2025-06-03 12:02:14] 2025-06-03 09:42:14,100 | INFO     | exeerrorcode: 0
[2025-06-03 12:02:14] 2025-06-03 09:42:14,100 | INFO     | exeerrordiag: 
[2025-06-03 12:02:14] 2025-06-03 09:42:14,100 | INFO     | exitcode: 0
[2025-06-03 12:02:14] 2025-06-03 09:42:14,100 | INFO     | exitmsg: OK
[2025-06-03 12:02:14] 2025-06-03 09:42:14,100 | INFO     | cpuconsumptiontime: 48865 s
[2025-06-03 12:02:14] 2025-06-03 09:42:14,100 | INFO     | nevents: 400
[2025-06-03 12:02:14] 2025-06-03 09:42:14,100 | INFO     | neventsw: 0
[2025-06-03 12:02:14] 2025-06-03 09:42:14,100 | INFO     | pid: 1891
[2025-06-03 12:02:14] 2025-06-03 09:42:14,100 | INFO     | pgrp: 1891
[2025-06-03 12:02:14] 2025-06-03 09:42:14,100 | INFO     | corecount: 8
[2025-06-03 12:02:14] 2025-06-03 09:42:14,100 | INFO     | event service: False
[2025-06-03 12:02:14] 2025-06-03 09:42:14,101 | INFO     | sizes: {0: 2405006, 1: 2405205, 2: 2405205, 12: 2405233, 23: 2405261, 26: 2405495, 34: 2405651, 13265: 2434942, 13270: 2443883, 13271: 2443939, 13370: 2444109}
[2025-06-03 12:02:14] 2025-06-03 09:42:14,101 | INFO     | --------------------------------------------------
[2025-06-03 12:02:14] 2025-06-03 09:42:14,101 | INFO     | 
[2025-06-03 12:02:14] 2025-06-03 09:42:14,101 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 12:02:14] 2025-06-03 09:42:14,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,629 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:02:14] 2025-06-03 09:42:14,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,631 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:02:14] 2025-06-03 09:42:14,631 | INFO     | job 6677393392 has completed (purged errors)
[2025-06-03 12:02:14] 2025-06-03 09:42:14,631 | INFO     | overall cleanup function is called
[2025-06-03 12:02:14] 2025-06-03 09:42:15,641 | INFO     | --- collectZombieJob: --- 10, [1891]
[2025-06-03 12:02:14] 2025-06-03 09:42:15,641 | INFO     | zombie collector waiting for pid 1891
[2025-06-03 12:02:14] 2025-06-03 09:42:15,641 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:02:14] 2025-06-03 09:42:15,641 | INFO     | collected zombie processes
[2025-06-03 12:02:14] 2025-06-03 09:42:15,641 | INFO     | will attempt to kill all subprocesses of pid=1891
[2025-06-03 12:02:14] 2025-06-03 09:42:15,819 | INFO     | process IDs to be killed: [1891] (in reverse order)
[2025-06-03 12:02:14] 2025-06-03 09:42:16,164 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:02:14] 2025-06-03 09:42:16,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:02:14] 2025-06-03 09:42:16,174 | INFO     | did not find any defunct processes belonging to 1891
[2025-06-03 12:02:14] 2025-06-03 09:42:16,177 | INFO     | did not find any defunct processes belonging to 1891
[2025-06-03 12:02:14] 2025-06-03 09:42:16,178 | INFO     | ready for new job
[2025-06-03 12:02:14] 2025-06-03 09:42:16,178 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:02:14] 2025-06-03 09:42:16,180 | INFO     | **************************************
[2025-06-03 12:02:14] 2025-06-03 09:42:16,180 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:02:14] 2025-06-03 09:42:16,180 | INFO     | **************************************
[2025-06-03 12:02:14] 2025-06-03 09:42:16,180 | INFO     | 
[2025-06-03 12:02:14] 2025-06-03 09:42:16,181 | INFO     | pilot is running in a VM
[2025-06-03 12:02:14] 2025-06-03 09:42:16,181 | INFO     | architecture information:
[2025-06-03 12:02:14] 2025-06-03 09:42:16,190 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:02:14] 2025-06-03 09:42:16,448 | INFO     | cat /etc/os-release:
[2025-06-03 12:02:14] NAME="CentOS Linux"
[2025-06-03 12:02:14] VERSION="7 (Core)"
[2025-06-03 12:02:14] ID="centos"
[2025-06-03 12:02:14] ID_LIKE="rhel fedora"
[2025-06-03 12:02:14] VERSION_ID="7"
[2025-06-03 12:02:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:02:14] ANSI_COLOR="0;31"
[2025-06-03 12:02:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:02:14] HOME_URL="https://www.centos.org/"
[2025-06-03 12:02:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:02:14] 
[2025-06-03 12:02:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:02:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:02:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:02:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:02:14] 
[2025-06-03 12:02:14] 2025-06-03 09:42:16,449 | INFO     | **************************************
[2025-06-03 12:02:14] 2025-06-03 09:42:16,952 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 12:02:14] 2025-06-03 09:42:17,105 | INFO     | sufficient remaining disk space (496937992192 B)
[2025-06-03 12:02:14] 2025-06-03 09:42:17,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:02:14] 2025-06-03 09:42:17,105 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:02:14] 2025-06-03 09:42:17,105 | INFO     | update_server=False
[2025-06-03 12:02:14] 2025-06-03 09:42:17,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:02:14] 2025-06-03 09:42:17,107 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:02:14] 2025-06-03 09:42:17,107 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:02:14] 2025-06-03 09:42:17,107 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:02:14] 2025-06-03 09:42:17,107 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:02:14] 2025-06-03 09:42:17,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:02:14] 2025-06-03 09:42:17,108 | INFO     | aborting loop
[2025-06-03 12:02:14] 2025-06-03 09:42:17,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:02:14] 2025-06-03 09:42:17,175 | INFO     | all payload control threads have been joined
[2025-06-03 12:02:14] 2025-06-03 09:42:18,025 | INFO     | all job control threads have been joined
[2025-06-03 12:02:14] 2025-06-03 09:42:18,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:02:14] 2025-06-03 09:42:18,112 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:18,114 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:18,181 | INFO     | [payload] control thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:18,184 | INFO     | all data control threads have been joined
[2025-06-03 12:02:14] 2025-06-03 09:42:18,275 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:18,349 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:18,439 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:18,870 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:18,870 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:18,989 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:19,031 | INFO     | [job] control thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:19,035 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:19,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:02:14] 2025-06-03 09:42:19,190 | INFO     | [data] control thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:19,525 | INFO     | [job] validate thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:20,049 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:20,056 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:21,117 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:02:14] 2025-06-03 09:42:22,503 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307287525184)>', '<ExcThread(monitor, started 140306582337280)>']
[2025-06-03 12:02:14] 2025-06-03 09:42:23,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:02:14] 2025-06-03 09:42:23,143 | INFO     | [monitor] control thread has ended
[2025-06-03 12:02:14] 2025-06-03 09:42:27,529 | INFO     | all workflow threads have been joined
[2025-06-03 12:02:14] 2025-06-03 09:42:27,529 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:02:14] 2025-06-03 09:42:27,529 | INFO     | traces error code: 0
[2025-06-03 12:02:14] 2025-06-03 09:42:27,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:02:14] 2025-06-03 09:43:27,746 [wrapper] supervise_pilot (15 min periods counter: 16)
[2025-06-03 12:02:14] 2025-06-03 09:43:27,745 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:02:14] 2025-06-03 09:43:27,816 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:02:14] 2025-06-03 09:43:27,863 [wrapper] pilotpid: 9902
[2025-06-03 12:02:14] 2025-06-03 09:43:27,936 [wrapper] Pilot exit status: 0
[2025-06-03 12:02:14] 2025-06-03 09:43:28,279 [wrapper] pandaids: 6677393392
[2025-06-03 12:02:14] 2025-06-03 09:43:29,041 [wrapper] cleanup supervisor_pilot 13484 9903
[2025-06-03 12:02:14] 2025-06-03 09:43:29,138 [wrapper] Test setup, not cleaning
[2025-06-03 12:02:14] 2025-06-03 09:43:29,223 [wrapper] apfmon messages muted
[2025-06-03 12:02:14] 2025-06-03 09:43:29,345 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:02:14] 2025-06-03 09:43:29,450 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:02:14]  *** Error codes and diagnostics ***
[2025-06-03 12:02:14]     "exeErrorCode": 0,
[2025-06-03 12:02:14]     "exeErrorDiag": "",
[2025-06-03 12:02:14]     "pilotErrorCode": 0,
[2025-06-03 12:02:14]     "pilotErrorDiag": "",
[2025-06-03 12:02:14]  *** Listing of results directory ***
[2025-06-03 12:02:14] total 392800
[2025-06-03 12:02:14] -rwx------. 1 boinc boinc     37140 Jun  2 21:02 runpilot2-wrapper.sh
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:02 pilot3.tar.gz
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:02 queuedata.json
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc       100 Jun  3 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:02:14] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 07:57 run_atlas
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc       105 Jun  3 07:57 job.xml
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc      6390 Jun  3 07:57 init_data.xml
[2025-06-03 12:02:14] -rw-r--r--. 2 boinc boinc 213944580 Jun  3 07:57 EVNT.45006593._000343.pool.root.1
[2025-06-03 12:02:14] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:57 start_atlas.sh
[2025-06-03 12:02:14] drwxrwx--x. 2 boinc boinc        68 Jun  3 07:57 shared
[2025-06-03 12:02:14] -rw-r--r--. 2 boinc boinc    508869 Jun  3 07:57 input.tar.gz
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc         0 Jun  3 07:57 boinc_lockfile
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc      2521 Jun  3 07:57 pandaJob.out
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc    988073 Jun  3 07:58 agis_schedconf.cvmfs.json
[2025-06-03 12:02:14] drwx------. 4 boinc boinc      4096 Jun  3 07:58 pilot3
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc 181380712 Jun  3 11:39 HITS.45006595._008567.pool.root.1
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc       531 Jun  3 11:39 boinc_task_state.xml
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc      1013 Jun  3 11:40 memory_monitor_summary.json
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc   1603667 Jun  3 11:40 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc    382793 Jun  3 11:40 log.45006595._008567.job.log.tgz.1
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc        95 Jun  3 11:41 pilot_heartbeat.json
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc      7682 Jun  3 11:42 heartbeat.json
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc      4539 Jun  3 11:42 pilotlog.txt
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc   1158227 Jun  3 11:43 log.45006595._008567.job.log.1
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc       357 Jun  3 11:43 output.list
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc       620 Jun  3 11:43 runtime_log
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc   1556480 Jun  3 11:43 result.tar.gz
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc      8659 Jun  3 11:43 runtime_log.err
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc       656 Jun  3 11:43 pfZKDmwbPg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaKWKDmQIuWKm.diag
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc      8192 Jun  3 12:02 boinc_mmap_file
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc        28 Jun  3 12:02 wrapper_checkpoint.txt
[2025-06-03 12:02:14] -rw-r--r--. 1 boinc boinc     20718 Jun  3 12:02 stderr.txt
[2025-06-03 12:02:14] HITS file was successfully produced:
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc 181380712 Jun  3 11:39 shared/HITS.pool.root.1
[2025-06-03 12:02:14]  *** Contents of shared directory: ***
[2025-06-03 12:02:14] total 388100
[2025-06-03 12:02:14] -rw-r--r--. 2 boinc boinc 213944580 Jun  3 07:57 ATLAS.root_0
[2025-06-03 12:02:14] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:57 start_atlas.sh
[2025-06-03 12:02:14] -rw-r--r--. 2 boinc boinc    508869 Jun  3 07:57 input.tar.gz
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc 181380712 Jun  3 11:39 HITS.pool.root.1
[2025-06-03 12:02:14] -rw-------. 1 boinc boinc   1556480 Jun  3 11:43 result.tar.gz
12:02:15 (30143): run_atlas exited; CPU time 49042.800720
12:02:15 (30143): called boinc_finish(0)

</stderr_txt>
]]>

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