Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:31:44 (2512875): wrapper (7.7.26015): starting
14:31:44 (2512875): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 14:31:44] Arguments: --nthreads 4
[2025-06-04 14:31:44] Threads: 4
[2025-06-04 14:31:44] Checking for CVMFS
[2025-06-04 14:31:44] No cvmfs_config command found, will try listing directly
[2025-06-04 14:31:44] CVMFS is ok
[2025-06-04 14:31:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:31:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:31:44] Further information can be found at the LHC@home message board.
[2025-06-04 14:31:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:31:44] Checking for apptainer binary...
[2025-06-04 14:31:44] which: no apptainer in ((null))
[2025-06-04 14:31:44] apptainer is not installed, using version from CVMFS
[2025-06-04 14:31:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:31:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-06-04 14:31:44] apptainer works
[2025-06-04 14:31:44] Set ATHENA_PROC_NUMBER=4
[2025-06-04 14:31:44] Set ATHENA_CORE_NUMBER=4
[2025-06-04 14:31:44] Starting ATLAS job with PandaID=6677384521
[2025-06-04 14:31:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:47:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:47:04] 2025-06-04 14:46:23,633 | INFO     | monitor loop #560: job 0:6677384521 is in state 'finished'
[2025-06-04 16:47:04] 2025-06-04 14:46:23,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:47:04] 2025-06-04 14:46:25,809 | INFO     | PID=2516797 has CPU usage=21.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 16:47:04] 2025-06-04 14:46:25,809 | INFO     | .. there are 13 such processes running
[2025-06-04 16:47:04] 2025-06-04 14:46:26,136 | INFO     | monitor loop #561: job 0:6677384521 is in state 'finished'
[2025-06-04 16:47:04] 2025-06-04 14:46:26,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:47:04] 2025-06-04 14:46:27,771 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 16:47:04] 2025-06-04 14:46:27,771 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6677384521/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:47:04] 2025-06-04 14:46:27,772 | INFO     | extracted standard info from prmon json
[2025-06-04 16:47:04] 2025-06-04 14:46:27,772 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:47:04] 2025-06-04 14:46:27,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:47:04] 2025-06-04 14:46:27,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:47:04] 2025-06-04 14:46:27,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:47:04] 2025-06-04 14:46:27,775 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:47:04] 2025-06-04 14:46:27,775 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 16:47:04] 2025-06-04 14:46:27,776 | INFO     | sum of deviations: 4583227192.000005
[2025-06-04 16:47:04] 2025-06-04 14:46:27,776 | INFO     | mean x: 1749044351.5
[2025-06-04 16:47:04] 2025-06-04 14:46:27,776 | INFO     | mean y: 2334922.6515151514
[2025-06-04 16:47:04] 2025-06-04 14:46:27,776 | INFO     | -- intersect: -11238457198.173035
[2025-06-04 16:47:04] 2025-06-04 14:46:27,776 | INFO     | intersect: -11238457198.173035
[2025-06-04 16:47:04] 2025-06-04 14:46:27,776 | INFO     | chi2: 1.5893820220870638
[2025-06-04 16:47:04] 2025-06-04 14:46:27,776 | INFO     | sum of square deviations: 635130048.0
[2025-06-04 16:47:04] 2025-06-04 14:46:27,777 | INFO     | sum of deviations: 4513273123.999996
[2025-06-04 16:47:04] 2025-06-04 14:46:27,777 | INFO     | mean x: 1749044199.0
[2025-06-04 16:47:04] 2025-06-04 14:46:27,777 | INFO     | mean y: 2334796.157480315
[2025-06-04 16:47:04] 2025-06-04 14:46:27,777 | INFO     | -- intersect: -12426480689.57246
[2025-06-04 16:47:04] 2025-06-04 14:46:27,777 | INFO     | intersect: -12426480689.57246
[2025-06-04 16:47:04] 2025-06-04 14:46:27,778 | INFO     | chi2: 1.5908382458067234
[2025-06-04 16:47:04] 2025-06-04 14:46:27,778 | INFO     | current chi2=1.5908382458067234 (change=-0.09162200776295297 %)
[2025-06-04 16:47:04] 2025-06-04 14:46:27,778 | INFO     | right removable region: 126
[2025-06-04 16:47:04] 2025-06-04 14:46:27,778 | INFO     | sum of square deviations: 635130048.0
[2025-06-04 16:47:04] 2025-06-04 14:46:27,779 | INFO     | sum of deviations: -14603195101.0
[2025-06-04 16:47:04] 2025-06-04 14:46:27,779 | INFO     | mean x: 1749044504.0
[2025-06-04 16:47:04] 2025-06-04 14:46:27,779 | INFO     | mean y: 2371764.4645669293
[2025-06-04 16:47:04] 2025-06-04 14:46:27,779 | INFO     | -- intersect: 40217187946.87226
[2025-06-04 16:47:04] 2025-06-04 14:46:27,779 | INFO     | intersect: 40217187946.87226
[2025-06-04 16:47:04] 2025-06-04 14:46:27,779 | INFO     | chi2: 0.028404486026590535
[2025-06-04 16:47:04] 2025-06-04 14:46:27,779 | INFO     | current chi2=0.028404486026590535 (change=98.21285973844779 %)
[2025-06-04 16:47:04] 2025-06-04 14:46:27,780 | INFO     | sum of square deviations: 563026370.5
[2025-06-04 16:47:04] 2025-06-04 14:46:27,780 | INFO     | sum of deviations: -13109339657.500025
[2025-06-04 16:47:04] 2025-06-04 14:46:27,780 | INFO     | mean x: 1749044656.5
[2025-06-04 16:47:04] 2025-06-04 14:46:27,780 | INFO     | mean y: 2368559.2540983604
[2025-06-04 16:47:04] 2025-06-04 14:46:27,781 | INFO     | -- intersect: 40726607563.959755
[2025-06-04 16:47:04] 2025-06-04 14:46:27,781 | INFO     | intersect: 40726607563.959755
[2025-06-04 16:47:04] 2025-06-04 14:46:27,781 | INFO     | chi2: 0.025304083165252303
[2025-06-04 16:47:04] 2025-06-04 14:46:27,781 | INFO     | current chi2=0.025304083165252303 (change=10.915187334971757 %)
[2025-06-04 16:47:04] 2025-06-04 14:46:27,781 | INFO     | left removable region: 20
[2025-06-04 16:47:04] 2025-06-04 14:46:27,781 | INFO     | sum of square deviations: 369281342.5
[2025-06-04 16:47:04] 2025-06-04 14:46:27,782 | INFO     | sum of deviations: -7599360205.5
[2025-06-04 16:47:04] 2025-06-04 14:46:27,782 | INFO     | mean x: 1749044778.5
[2025-06-04 16:47:04] 2025-06-04 14:46:27,782 | INFO     | mean y: 2357403.5
[2025-06-04 16:47:04] 2025-06-04 14:46:27,782 | INFO     | -- intersect: 35995568426.2596
[2025-06-04 16:47:04] 2025-06-04 14:46:27,782 | INFO     | intersect: 35995568426.2596
[2025-06-04 16:47:04] 2025-06-04 14:46:27,782 | INFO     | chi2: 0.013987317873731402
[2025-06-04 16:47:04] 2025-06-04 14:46:27,782 | INFO     | -- intersect: 35995568426.2596
[2025-06-04 16:47:04] 2025-06-04 14:46:27,782 | INFO     | current memory leak: -20.58 B/s (using 106 data points, chi2=0.01)
[2025-06-04 16:47:04] 2025-06-04 14:46:27,783 | INFO     | ..............................
[2025-06-04 16:47:04] 2025-06-04 14:46:27,783 | INFO     | . Timing measurements:
[2025-06-04 16:47:04] 2025-06-04 14:46:27,783 | INFO     | . get job = 0 s
[2025-06-04 16:47:04] 2025-06-04 14:46:27,783 | INFO     | . initial setup = 1 s
[2025-06-04 16:47:04] 2025-06-04 14:46:27,783 | INFO     | . payload setup = 10 s
[2025-06-04 16:47:04] 2025-06-04 14:46:27,783 | INFO     | . stage-in = 0 s
[2025-06-04 16:47:04] 2025-06-04 14:46:27,783 | INFO     | . payload execution = 8024 s
[2025-06-04 16:47:04] 2025-06-04 14:46:27,783 | INFO     | . stage-out = 0 s
[2025-06-04 16:47:04] 2025-06-04 14:46:27,784 | INFO     | . log creation = 0 s
[2025-06-04 16:47:04] 2025-06-04 14:46:27,784 | INFO     | ..............................
[2025-06-04 16:47:04] 2025-06-04 14:46:27,871 | INFO     | 
[2025-06-04 16:47:04] 2025-06-04 14:46:27,871 | INFO     | job summary report
[2025-06-04 16:47:04] 2025-06-04 14:46:27,871 | INFO     | --------------------------------------------------
[2025-06-04 16:47:04] 2025-06-04 14:46:27,871 | INFO     | PanDA job id: 6677384521
[2025-06-04 16:47:04] 2025-06-04 14:46:27,871 | INFO     | task id: 45006595
[2025-06-04 16:47:04] 2025-06-04 14:46:27,871 | INFO     | errors: (none)
[2025-06-04 16:47:04] 2025-06-04 14:46:27,871 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:47:04] 2025-06-04 14:46:27,871 | INFO     | pilot state: finished 
[2025-06-04 16:47:04] 2025-06-04 14:46:27,871 | INFO     | transexitcode: 0
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | exeerrorcode: 0
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | exeerrordiag: 
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | exitcode: 0
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | exitmsg: OK
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | cpuconsumptiontime: 30377 s
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | nevents: 400
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | neventsw: 0
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | pid: 2524546
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | pgrp: 2524546
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | corecount: 4
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | event service: False
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | sizes: {0: 2397176, 1: 2397375, 8: 2397581, 11: 2397609, 8039: 2425593, 8040: 2434558, 8043: 2434742, 8051: 2434912}
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | --------------------------------------------------
[2025-06-04 16:47:04] 2025-06-04 14:46:27,872 | INFO     | 
[2025-06-04 16:47:04] 2025-06-04 14:46:27,873 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-06-04 16:47:04] 2025-06-04 14:46:27,903 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:47:04] 2025-06-04 14:46:27,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,905 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:47:04] 2025-06-04 14:46:27,905 | INFO     | job 6677384521 has completed (purged errors)
[2025-06-04 16:47:04] 2025-06-04 14:46:27,905 | INFO     | overall cleanup function is called
[2025-06-04 16:47:04] 2025-06-04 14:46:28,913 | INFO     | --- collectZombieJob: --- 10, [2524546]
[2025-06-04 16:47:04] 2025-06-04 14:46:28,914 | INFO     | zombie collector waiting for pid 2524546
[2025-06-04 16:47:04] 2025-06-04 14:46:28,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:47:04] 2025-06-04 14:46:28,914 | INFO     | collected zombie processes
[2025-06-04 16:47:04] 2025-06-04 14:46:28,914 | INFO     | will attempt to kill all subprocesses of pid=2524546
[2025-06-04 16:47:04] 2025-06-04 14:46:29,571 | INFO     | process IDs to be killed: [2524546] (in reverse order)
[2025-06-04 16:47:04] 2025-06-04 14:46:29,827 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:47:04] 2025-06-04 14:46:29,828 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:47:04] 2025-06-04 14:46:29,873 | INFO     | did not find any defunct processes belonging to 2524546
[2025-06-04 16:47:04] 2025-06-04 14:46:29,913 | INFO     | did not find any defunct processes belonging to 2524546
[2025-06-04 16:47:04] 2025-06-04 14:46:29,914 | INFO     | ready for new job
[2025-06-04 16:47:04] 2025-06-04 14:46:29,914 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:47:04] 2025-06-04 14:46:29,917 | INFO     | **************************************
[2025-06-04 16:47:04] 2025-06-04 14:46:29,917 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:47:04] 2025-06-04 14:46:29,918 | INFO     | **************************************
[2025-06-04 16:47:04] 2025-06-04 14:46:29,918 | INFO     | 
[2025-06-04 16:47:04] 2025-06-04 14:46:29,929 | INFO     | architecture information:
[2025-06-04 16:47:04] 2025-06-04 14:46:29,929 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:47:04] 2025-06-04 14:46:29,954 | INFO     | cat /etc/os-release:
[2025-06-04 16:47:04] NAME="CentOS Linux"
[2025-06-04 16:47:04] VERSION="7 (Core)"
[2025-06-04 16:47:04] ID="centos"
[2025-06-04 16:47:04] ID_LIKE="rhel fedora"
[2025-06-04 16:47:04] VERSION_ID="7"
[2025-06-04 16:47:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:47:04] ANSI_COLOR="0;31"
[2025-06-04 16:47:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:47:04] HOME_URL="https://www.centos.org/"
[2025-06-04 16:47:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:47:04] 
[2025-06-04 16:47:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:47:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:47:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:47:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:47:04] 
[2025-06-04 16:47:04] 2025-06-04 14:46:29,955 | INFO     | **************************************
[2025-06-04 16:47:04] 2025-06-04 14:46:30,457 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-06-04 16:47:04] 2025-06-04 14:46:30,480 | INFO     | sufficient remaining disk space (3243505614848 B)
[2025-06-04 16:47:04] 2025-06-04 14:46:30,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:47:04] 2025-06-04 14:46:30,481 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:47:04] 2025-06-04 14:46:30,481 | INFO     | update_server=False
[2025-06-04 16:47:04] 2025-06-04 14:46:30,481 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:47:04] 2025-06-04 14:46:30,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:47:04] 2025-06-04 14:46:30,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:47:04] 2025-06-04 14:46:30,483 | INFO     | aborting loop
[2025-06-04 16:47:04] 2025-06-04 14:46:30,483 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:47:04] 2025-06-04 14:46:30,484 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:47:04] 2025-06-04 14:46:30,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:47:04] 2025-06-04 14:46:30,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:47:04] 2025-06-04 14:46:30,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:47:04] 2025-06-04 14:46:30,594 | INFO     | all payload control threads have been joined
[2025-06-04 16:47:04] 2025-06-04 14:46:30,599 | INFO     | all job control threads have been joined
[2025-06-04 16:47:04] 2025-06-04 14:46:31,332 | INFO     | all data control threads have been joined
[2025-06-04 16:47:04] 2025-06-04 14:46:31,487 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:31,487 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:31,599 | INFO     | [payload] control thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:31,605 | INFO     | [job] control thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:31,807 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:31,820 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:32,310 | INFO     | [job] validate thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:32,338 | INFO     | [data] control thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:32,379 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:32,490 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:32,801 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:32,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:47:04] 2025-06-04 14:46:32,885 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:32,907 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:33,885 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:34,488 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:41,458 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:47:04] 2025-06-04 14:46:42,463 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:47:04] 2025-06-04 14:46:44,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22424639960896)>', '<ExcThread(monitor, started 22424393299712)>']
[2025-06-04 16:47:04] 2025-06-04 14:46:44,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:47:04] 2025-06-04 14:46:44,555 | INFO     | [monitor] control thread has ended
[2025-06-04 16:47:04] 2025-06-04 14:46:49,421 | INFO     | all workflow threads have been joined
[2025-06-04 16:47:04] 2025-06-04 14:46:49,422 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:47:04] 2025-06-04 14:46:49,422 | INFO     | traces error code: 0
[2025-06-04 16:47:04] 2025-06-04 14:46:49,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:47:04] 2025-06-04 14:46:49,584 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:47:04] 2025-06-04 14:46:49,588 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:47:04] 2025-06-04 14:46:49,592 [wrapper] pilotpid: 2516797
[2025-06-04 16:47:04] 2025-06-04 14:46:49,598 [wrapper] Pilot exit status: 0
[2025-06-04 16:47:04] 2025-06-04 14:46:49,614 [wrapper] pandaids: 6677384521
[2025-06-04 16:47:04] 2025-06-04 14:46:49,775 [wrapper] cleanup supervisor_pilot 2948746 2516798
[2025-06-04 16:47:04] 2025-06-04 14:46:49,780 [wrapper] Test setup, not cleaning
[2025-06-04 16:47:04] 2025-06-04 14:46:49,784 [wrapper] apfmon messages muted
[2025-06-04 16:47:04] 2025-06-04 14:46:49,788 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:47:04] 2025-06-04 14:46:49,791 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:47:04]  *** Error codes and diagnostics ***
[2025-06-04 16:47:04]     "exeErrorCode": 0,
[2025-06-04 16:47:04]     "exeErrorDiag": "",
[2025-06-04 16:47:04]     "pilotErrorCode": 0,
[2025-06-04 16:47:04]     "pilotErrorDiag": "",
[2025-06-04 16:47:04]  *** Listing of results directory ***
[2025-06-04 16:47:04] total 389516
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc    495897 Jun  2 18:40 pilot3.tar.gz
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc      5111 Jun  2 18:50 queuedata.json
[2025-06-04 16:47:04] -rwx------ 1 boinc boinc     37140 Jun  2 18:51 runpilot2-wrapper.sh
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc       100 Jun  4 14:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:47:04] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 14:31 run_atlas
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc       105 Jun  4 14:31 job.xml
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc      6687 Jun  4 14:31 init_data.xml
[2025-06-04 16:47:04] -rw-r--r-- 2 boinc boinc 214267453 Jun  4 14:31 EVNT.45006593._000173.pool.root.1
[2025-06-04 16:47:04] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:31 start_atlas.sh
[2025-06-04 16:47:04] drwxrwx--x 2 boinc boinc      4096 Jun  4 14:31 shared
[2025-06-04 16:47:04] -rw-r--r-- 2 boinc boinc    508880 Jun  4 14:31 input.tar.gz
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc         0 Jun  4 14:31 boinc_lockfile
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc      2521 Jun  4 14:31 pandaJob.out
[2025-06-04 16:47:04] -rw------- 1 boinc boinc    986811 Jun  4 14:31 agis_schedconf.cvmfs.json
[2025-06-04 16:47:04] -rw------- 1 boinc boinc   1598969 Jun  4 14:31 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:47:04] drwx------ 4 boinc boinc      4096 Jun  4 14:31 pilot3
[2025-06-04 16:47:04] -rw------- 1 boinc boinc        95 Jun  4 16:45 pilot_heartbeat.json
[2025-06-04 16:47:04] -rw------- 1 boinc boinc 178688214 Jun  4 16:45 HITS.45006595._004311.pool.root.1
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc       528 Jun  4 16:45 boinc_task_state.xml
[2025-06-04 16:47:04] -rw------- 1 boinc boinc      1029 Jun  4 16:46 memory_monitor_summary.json
[2025-06-04 16:47:04] -rw------- 1 boinc boinc    271781 Jun  4 16:46 log.45006595._004311.job.log.tgz.1
[2025-06-04 16:47:04] -rw------- 1 boinc boinc      7695 Jun  4 16:46 heartbeat.json
[2025-06-04 16:47:04] -rw------- 1 boinc boinc      4560 Jun  4 16:46 pilotlog.txt
[2025-06-04 16:47:04] -rw------- 1 boinc boinc    763807 Jun  4 16:46 log.45006595._004311.job.log.1
[2025-06-04 16:47:04] -rw------- 1 boinc boinc       357 Jun  4 16:46 output.list
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc       620 Jun  4 16:46 runtime_log
[2025-06-04 16:47:04] -rw------- 1 boinc boinc   1054720 Jun  4 16:46 result.tar.gz
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc      9040 Jun  4 16:46 runtime_log.err
[2025-06-04 16:47:04] -rw------- 1 boinc boinc       663 Jun  4 16:46 GPAODmnYNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdWfKDmZyc7Gn.diag
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc        26 Jun  4 16:46 wrapper_checkpoint.txt
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc      8192 Jun  4 16:47 boinc_mmap_file
[2025-06-04 16:47:04] -rw-r--r-- 1 boinc boinc     20934 Jun  4 16:47 stderr.txt
[2025-06-04 16:47:04] HITS file was successfully produced:
[2025-06-04 16:47:04] -rw------- 1 boinc boinc 178688214 Jun  4 16:45 shared/HITS.pool.root.1
[2025-06-04 16:47:04]  *** Contents of shared directory: ***
[2025-06-04 16:47:04] total 385308
[2025-06-04 16:47:04] -rw-r--r-- 2 boinc boinc 214267453 Jun  4 14:31 ATLAS.root_0
[2025-06-04 16:47:04] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:31 start_atlas.sh
[2025-06-04 16:47:04] -rw-r--r-- 2 boinc boinc    508880 Jun  4 14:31 input.tar.gz
[2025-06-04 16:47:04] -rw------- 1 boinc boinc 178688214 Jun  4 16:45 HITS.pool.root.1
[2025-06-04 16:47:04] -rw------- 1 boinc boinc   1054720 Jun  4 16:46 result.tar.gz
16:47:06 (2512875): run_atlas exited; CPU time 30812.843516
16:47:06 (2512875): called boinc_finish(0)

</stderr_txt>
]]>

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