Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:48:53 (29220): wrapper (7.7.26015): starting
12:48:53 (29220): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:48:53] Arguments: --nthreads 8
[2025-06-03 12:48:53] Threads: 8
[2025-06-03 12:48:53] Checking for CVMFS
[2025-06-03 12:48:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:48:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:48:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:48:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:48:56] 2.11.2.0 23601 31684 98820 146737 0 16 18557144 25165825 4636 130560 0 16250577 99.808 18220662 2111 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 12:48:56] CVMFS is ok
[2025-06-03 12:48:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:48:56] Checking for apptainer binary...
[2025-06-03 12:48:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:48:56] Running /usr/bin/apptainer --version
[2025-06-03 12:48:56] apptainer version 1.3.2-1.el7
[2025-06-03 12:48:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:49:49] cg-vwn275.simple-grid.lan
[2025-06-03 12:49:49] apptainer works
[2025-06-03 12:49:49] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:49:49] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:49:49] Starting ATLAS job with PandaID=6677393028
[2025-06-03 12:49:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:58:21]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:58:21] 2025-06-03 14:36:16,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:58:21] 2025-06-03 14:36:18,507 | INFO     | monitor loop #1010: job 0:6677393028 is in state 'finished'
[2025-06-03 21:58:21] 2025-06-03 14:36:18,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:58:21] 2025-06-03 14:36:18,773 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 21:58:21] 2025-06-03 14:36:18,773 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6677393028/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:58:21] 2025-06-03 14:36:18,774 | INFO     | extracted standard info from prmon json
[2025-06-03 21:58:21] 2025-06-03 14:36:18,774 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:58:21] 2025-06-03 14:36:18,775 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:58:21] 2025-06-03 14:36:18,775 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:58:21] 2025-06-03 14:36:18,775 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:58:21] 2025-06-03 14:36:18,779 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:58:21] 2025-06-03 14:36:18,780 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 21:58:21] 2025-06-03 14:36:18,782 | INFO     | sum of deviations: 30758000354.000008
[2025-06-03 21:58:21] 2025-06-03 14:36:18,782 | INFO     | mean x: 1748954889.0
[2025-06-03 21:58:21] 2025-06-03 14:36:18,782 | INFO     | mean y: 2448310.8246445497
[2025-06-03 21:58:21] 2025-06-03 14:36:18,782 | INFO     | -- intersect: -18465585904.04763
[2025-06-03 21:58:21] 2025-06-03 14:36:18,782 | INFO     | intersect: -18465585904.04763
[2025-06-03 21:58:21] 2025-06-03 14:36:18,782 | INFO     | chi2: 3.874251493962457
[2025-06-03 21:58:21] 2025-06-03 14:36:18,783 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 21:58:21] 2025-06-03 14:36:18,784 | INFO     | sum of deviations: 43695557789.5
[2025-06-03 21:58:21] 2025-06-03 14:36:18,785 | INFO     | mean x: 1748954736.5
[2025-06-03 21:58:21] 2025-06-03 14:36:18,785 | INFO     | mean y: 2457866.2572815535
[2025-06-03 21:58:21] 2025-06-03 14:36:18,785 | INFO     | -- intersect: -28190848243.45618
[2025-06-03 21:58:21] 2025-06-03 14:36:18,785 | INFO     | intersect: -28190848243.45618
[2025-06-03 21:58:21] 2025-06-03 14:36:18,785 | INFO     | chi2: 3.125481645233772
[2025-06-03 21:58:21] 2025-06-03 14:36:18,785 | INFO     | current chi2=3.125481645233772 (change=19.32682609519672 %)
[2025-06-03 21:58:21] 2025-06-03 14:36:18,785 | INFO     | right removable region: 205
[2025-06-03 21:58:21] 2025-06-03 14:36:18,786 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 21:58:21] 2025-06-03 14:36:18,787 | INFO     | sum of deviations: -23295867395.5
[2025-06-03 21:58:21] 2025-06-03 14:36:18,787 | INFO     | mean x: 1748955041.5
[2025-06-03 21:58:21] 2025-06-03 14:36:18,787 | INFO     | mean y: 2488845.208737864
[2025-06-03 21:58:21] 2025-06-03 14:36:18,788 | INFO     | -- intersect: 15033482116.280901
[2025-06-03 21:58:21] 2025-06-03 14:36:18,788 | INFO     | intersect: 15033482116.280901
[2025-06-03 21:58:21] 2025-06-03 14:36:18,788 | INFO     | chi2: 0.9138463249720337
[2025-06-03 21:58:21] 2025-06-03 14:36:18,788 | INFO     | current chi2=0.9138463249720337 (change=76.41231276812694 %)
[2025-06-03 21:58:21] 2025-06-03 14:36:18,789 | INFO     | sum of square deviations: 2518000700.0
[2025-06-03 21:58:21] 2025-06-03 14:36:18,790 | INFO     | sum of deviations: -23816562389.0
[2025-06-03 21:58:21] 2025-06-03 14:36:18,790 | INFO     | mean x: 1748955194.0
[2025-06-03 21:58:21] 2025-06-03 14:36:18,790 | INFO     | mean y: 2489192.4378109453
[2025-06-03 21:58:21] 2025-06-03 14:36:18,790 | INFO     | -- intersect: 16545018546.566505
[2025-06-03 21:58:21] 2025-06-03 14:36:18,790 | INFO     | intersect: 16545018546.566505
[2025-06-03 21:58:21] 2025-06-03 14:36:18,791 | INFO     | chi2: 0.8808214869594536
[2025-06-03 21:58:21] 2025-06-03 14:36:18,791 | INFO     | current chi2=0.8808214869594536 (change=3.6138283987289332 %)
[2025-06-03 21:58:21] 2025-06-03 14:36:18,791 | INFO     | left removable region: 20
[2025-06-03 21:58:21] 2025-06-03 14:36:18,791 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 21:58:21] 2025-06-03 14:36:18,793 | INFO     | sum of deviations: 3766725111.9999995
[2025-06-03 21:58:21] 2025-06-03 14:36:18,793 | INFO     | mean x: 1748955316.0
[2025-06-03 21:58:21] 2025-06-03 14:36:18,793 | INFO     | mean y: 2487571.7945945947
[2025-06-03 21:58:21] 2025-06-03 14:36:18,793 | INFO     | -- intersect: -3353047030.8295946
[2025-06-03 21:58:21] 2025-06-03 14:36:18,793 | INFO     | intersect: -3353047030.8295946
[2025-06-03 21:58:21] 2025-06-03 14:36:18,793 | INFO     | chi2: 0.0004039209825459268
[2025-06-03 21:58:21] 2025-06-03 14:36:18,793 | INFO     | -- intersect: -3353047030.8295946
[2025-06-03 21:58:21] 2025-06-03 14:36:18,794 | INFO     | current memory leak: 1.92 B/s (using 185 data points, chi2=0.00)
[2025-06-03 21:58:21] 2025-06-03 14:36:18,794 | INFO     | ..............................
[2025-06-03 21:58:21] 2025-06-03 14:36:18,794 | INFO     | . Timing measurements:
[2025-06-03 21:58:21] 2025-06-03 14:36:18,794 | INFO     | . get job = 0 s
[2025-06-03 21:58:21] 2025-06-03 14:36:18,795 | INFO     | . initial setup = 7 s
[2025-06-03 21:58:21] 2025-06-03 14:36:18,795 | INFO     | . payload setup = 186 s
[2025-06-03 21:58:21] 2025-06-03 14:36:18,795 | INFO     | . stage-in = 0 s
[2025-06-03 21:58:21] 2025-06-03 14:36:18,795 | INFO     | . payload execution = 12974 s
[2025-06-03 21:58:21] 2025-06-03 14:36:18,795 | INFO     | . stage-out = 1 s
[2025-06-03 21:58:21] 2025-06-03 14:36:18,795 | INFO     | . log creation = 0 s
[2025-06-03 21:58:21] 2025-06-03 14:36:18,795 | INFO     | ..............................
[2025-06-03 21:58:21] 2025-06-03 14:36:18,934 | INFO     | 
[2025-06-03 21:58:21] 2025-06-03 14:36:18,935 | INFO     | job summary report
[2025-06-03 21:58:21] 2025-06-03 14:36:18,935 | INFO     | --------------------------------------------------
[2025-06-03 21:58:21] 2025-06-03 14:36:18,935 | INFO     | PanDA job id: 6677393028
[2025-06-03 21:58:21] 2025-06-03 14:36:18,935 | INFO     | task id: 45006595
[2025-06-03 21:58:21] 2025-06-03 14:36:18,935 | INFO     | errors: (none)
[2025-06-03 21:58:21] 2025-06-03 14:36:18,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:58:21] 2025-06-03 14:36:18,935 | INFO     | pilot state: finished 
[2025-06-03 21:58:21] 2025-06-03 14:36:18,935 | INFO     | transexitcode: 0
[2025-06-03 21:58:21] 2025-06-03 14:36:18,935 | INFO     | exeerrorcode: 0
[2025-06-03 21:58:21] 2025-06-03 14:36:18,935 | INFO     | exeerrordiag: 
[2025-06-03 21:58:21] 2025-06-03 14:36:18,935 | INFO     | exitcode: 0
[2025-06-03 21:58:21] 2025-06-03 14:36:18,935 | INFO     | exitmsg: OK
[2025-06-03 21:58:21] 2025-06-03 14:36:18,936 | INFO     | cpuconsumptiontime: 47341 s
[2025-06-03 21:58:21] 2025-06-03 14:36:18,936 | INFO     | nevents: 400
[2025-06-03 21:58:21] 2025-06-03 14:36:18,936 | INFO     | neventsw: 0
[2025-06-03 21:58:21] 2025-06-03 14:36:18,936 | INFO     | pid: 17380
[2025-06-03 21:58:21] 2025-06-03 14:36:18,936 | INFO     | pgrp: 17380
[2025-06-03 21:58:21] 2025-06-03 14:36:18,936 | INFO     | corecount: 8
[2025-06-03 21:58:21] 2025-06-03 14:36:18,936 | INFO     | event service: False
[2025-06-03 21:58:21] 2025-06-03 14:36:18,940 | INFO     | sizes: {0: 2404349, 1: 2405034, 2: 2405233, 13: 2405233, 23: 2405289, 34: 2405317, 45: 2405473, 55: 2405501, 66: 2405529, 77: 2405557, 87: 2405819, 88: 2406127, 13
[2025-06-03 21:58:21] 2025-06-03 14:36:18,940 | INFO     | --------------------------------------------------
[2025-06-03 21:58:21] 2025-06-03 14:36:18,941 | INFO     | 
[2025-06-03 21:58:21] 2025-06-03 14:36:18,941 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 21:58:21] 2025-06-03 14:36:19,145 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,145 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,145 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,145 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,145 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,146 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,146 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,146 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:58:21] 2025-06-03 14:36:19,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,147 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:58:21] 2025-06-03 14:36:19,147 | INFO     | job 6677393028 has completed (purged errors)
[2025-06-03 21:58:21] 2025-06-03 14:36:19,147 | INFO     | overall cleanup function is called
[2025-06-03 21:58:21] 2025-06-03 14:36:20,156 | INFO     | --- collectZombieJob: --- 10, [17380]
[2025-06-03 21:58:21] 2025-06-03 14:36:20,156 | INFO     | zombie collector waiting for pid 17380
[2025-06-03 21:58:21] 2025-06-03 14:36:20,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:58:21] 2025-06-03 14:36:20,157 | INFO     | collected zombie processes
[2025-06-03 21:58:21] 2025-06-03 14:36:20,157 | INFO     | will attempt to kill all subprocesses of pid=17380
[2025-06-03 21:58:21] 2025-06-03 14:36:20,441 | INFO     | process IDs to be killed: [17380] (in reverse order)
[2025-06-03 21:58:21] 2025-06-03 14:36:20,551 | INFO     | PID=2858 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 21:58:21] 2025-06-03 14:36:20,551 | INFO     | .. there are 9 such processes running
[2025-06-03 21:58:21] 2025-06-03 14:36:20,750 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:58:21] 2025-06-03 14:36:20,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:58:21] 2025-06-03 14:36:20,753 | INFO     | did not find any defunct processes belonging to 17380
[2025-06-03 21:58:21] 2025-06-03 14:36:20,757 | INFO     | did not find any defunct processes belonging to 17380
[2025-06-03 21:58:21] 2025-06-03 14:36:20,757 | INFO     | ready for new job
[2025-06-03 21:58:21] 2025-06-03 14:36:20,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:58:21] 2025-06-03 14:36:20,759 | INFO     | **************************************
[2025-06-03 21:58:21] 2025-06-03 14:36:20,759 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:58:21] 2025-06-03 14:36:20,760 | INFO     | **************************************
[2025-06-03 21:58:21] 2025-06-03 14:36:20,760 | INFO     | 
[2025-06-03 21:58:21] 2025-06-03 14:36:20,760 | INFO     | pilot is running in a VM
[2025-06-03 21:58:21] 2025-06-03 14:36:20,760 | INFO     | architecture information:
[2025-06-03 21:58:21] 2025-06-03 14:36:20,765 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:58:21] 2025-06-03 14:36:20,877 | INFO     | cat /etc/os-release:
[2025-06-03 21:58:21] NAME="CentOS Linux"
[2025-06-03 21:58:21] VERSION="7 (Core)"
[2025-06-03 21:58:21] ID="centos"
[2025-06-03 21:58:21] ID_LIKE="rhel fedora"
[2025-06-03 21:58:21] VERSION_ID="7"
[2025-06-03 21:58:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:58:21] ANSI_COLOR="0;31"
[2025-06-03 21:58:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:58:21] HOME_URL="https://www.centos.org/"
[2025-06-03 21:58:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:58:21] 
[2025-06-03 21:58:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:58:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:58:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:58:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:58:21] 
[2025-06-03 21:58:21] 2025-06-03 14:36:20,877 | INFO     | **************************************
[2025-06-03 21:58:21] 2025-06-03 14:36:21,380 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 21:58:21] 2025-06-03 14:36:21,538 | INFO     | sufficient remaining disk space (497011392512 B)
[2025-06-03 21:58:21] 2025-06-03 14:36:21,538 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:58:21] 2025-06-03 14:36:21,539 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:58:21] 2025-06-03 14:36:21,539 | INFO     | update_server=False
[2025-06-03 21:58:21] 2025-06-03 14:36:21,539 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:58:21] 2025-06-03 14:36:21,539 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:58:21] 2025-06-03 14:36:21,539 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:58:21] 2025-06-03 14:36:21,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:58:21] 2025-06-03 14:36:21,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:58:21] 2025-06-03 14:36:21,694 | INFO     | all job control threads have been joined
[2025-06-03 21:58:21] 2025-06-03 14:36:22,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:58:21] 2025-06-03 14:36:22,043 | INFO     | aborting loop
[2025-06-03 21:58:21] 2025-06-03 14:36:22,095 | INFO     | all data control threads have been joined
[2025-06-03 21:58:21] 2025-06-03 14:36:22,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:58:21] 2025-06-03 14:36:22,315 | INFO     | all payload control threads have been joined
[2025-06-03 21:58:21] 2025-06-03 14:36:22,545 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:22,700 | INFO     | [job] control thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:22,959 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:22,967 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:23,048 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:23,101 | INFO     | [data] control thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:23,207 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:23,321 | INFO     | [payload] control thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:23,385 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:23,500 | INFO     | [job] validate thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:23,543 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:23,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:58:21] 2025-06-03 14:36:23,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:58:21] 2025-06-03 14:36:24,039 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:24,318 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:24,953 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:27,831 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:31,972 | INFO     | job.realtimelogging is not enabled
[2025-06-03 21:58:21] 2025-06-03 14:36:32,977 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:58:21] 2025-06-03 14:36:33,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140637709346624)>', '<ExcThread(monitor, started 140637278033664)>']
[2025-06-03 21:58:21] 2025-06-03 14:36:34,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:58:21] 2025-06-03 14:36:34,618 | INFO     | [monitor] control thread has ended
[2025-06-03 21:58:21] 2025-06-03 14:36:38,714 | INFO     | all workflow threads have been joined
[2025-06-03 21:58:21] 2025-06-03 14:36:38,714 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:58:21] 2025-06-03 14:36:38,715 | INFO     | traces error code: 0
[2025-06-03 21:58:21] 2025-06-03 14:36:38,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:58:21] 2025-06-03 14:36:39,047 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:58:21] 2025-06-03 14:36:39,121 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:58:21] 2025-06-03 14:36:39,195 [wrapper] pilotpid: 2858
[2025-06-03 21:58:21] 2025-06-03 14:36:39,232 [wrapper] Pilot exit status: 0
[2025-06-03 21:58:21] 2025-06-03 14:36:39,605 [wrapper] pandaids: 6677393028
[2025-06-03 21:58:21] 2025-06-03 14:36:40,185 [wrapper] cleanup supervisor_pilot 14618 2859
[2025-06-03 21:58:21] 2025-06-03 14:36:40,255 [wrapper] Test setup, not cleaning
[2025-06-03 21:58:21] 2025-06-03 14:36:40,351 [wrapper] apfmon messages muted
[2025-06-03 21:58:21] 2025-06-03 14:36:40,421 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:58:21] 2025-06-03 14:36:40,543 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:58:21]  *** Error codes and diagnostics ***
[2025-06-03 21:58:21]     "exeErrorCode": 0,
[2025-06-03 21:58:21]     "exeErrorDiag": "",
[2025-06-03 21:58:21]     "pilotErrorCode": 0,
[2025-06-03 21:58:21]     "pilotErrorDiag": "",
[2025-06-03 21:58:21]  *** Listing of results directory ***
[2025-06-03 21:58:21] total 386536
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:47 pilot3.tar.gz
[2025-06-03 21:58:21] -rwx------. 1 boinc boinc     37140 Jun  2 20:52 runpilot2-wrapper.sh
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:52 queuedata.json
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc       100 Jun  3 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:58:21] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 12:48 run_atlas
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc       105 Jun  3 12:48 job.xml
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc      6390 Jun  3 12:48 init_data.xml
[2025-06-03 21:58:21] -rw-r--r--. 2 boinc boinc 215591077 Jun  3 12:48 EVNT.45006593._000329.pool.root.1
[2025-06-03 21:58:21] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:48 start_atlas.sh
[2025-06-03 21:58:21] drwxrwx--x. 2 boinc boinc        68 Jun  3 12:48 shared
[2025-06-03 21:58:21] -rw-r--r--. 2 boinc boinc    508873 Jun  3 12:48 input.tar.gz
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc         0 Jun  3 12:48 boinc_lockfile
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc      2521 Jun  3 12:49 pandaJob.out
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc    985490 Jun  3 12:52 agis_schedconf.cvmfs.json
[2025-06-03 21:58:21] drwx------. 4 boinc boinc      4096 Jun  3 12:52 pilot3
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc 173308303 Jun  3 16:34 HITS.45006595._008217.pool.root.1
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc       531 Jun  3 16:34 boinc_task_state.xml
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc      1020 Jun  3 16:35 memory_monitor_summary.json
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc   1603667 Jun  3 16:35 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc    384811 Jun  3 16:35 log.45006595._008217.job.log.tgz.1
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc        95 Jun  3 16:36 pilot_heartbeat.json
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc      7686 Jun  3 16:36 heartbeat.json
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc      4611 Jun  3 16:36 pilotlog.txt
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc   1162817 Jun  3 16:36 log.45006595._008217.job.log.1
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc       357 Jun  3 16:36 output.list
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc       620 Jun  3 16:36 runtime_log
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc   1566720 Jun  3 16:36 result.tar.gz
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc       656 Jun  3 16:36 XCpMDmvRPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmM7fKDmWtggXn.diag
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc      8659 Jun  3 16:36 runtime_log.err
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:58 boinc_mmap_file
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc        28 Jun  3 21:58 wrapper_checkpoint.txt
[2025-06-03 21:58:21] -rw-r--r--. 1 boinc boinc     20837 Jun  3 21:58 stderr.txt
[2025-06-03 21:58:21] HITS file was successfully produced:
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc 173308303 Jun  3 16:34 shared/HITS.pool.root.1
[2025-06-03 21:58:21]  *** Contents of shared directory: ***
[2025-06-03 21:58:21] total 381836
[2025-06-03 21:58:21] -rw-r--r--. 2 boinc boinc 215591077 Jun  3 12:48 ATLAS.root_0
[2025-06-03 21:58:21] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:48 start_atlas.sh
[2025-06-03 21:58:21] -rw-r--r--. 2 boinc boinc    508873 Jun  3 12:48 input.tar.gz
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc 173308303 Jun  3 16:34 HITS.pool.root.1
[2025-06-03 21:58:21] -rw-------. 1 boinc boinc   1566720 Jun  3 16:36 result.tar.gz
21:58:23 (29220): run_atlas exited; CPU time 47519.058414
21:58:23 (29220): called boinc_finish(0)

</stderr_txt>
]]>

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