Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-03 06:27:37 (268726): Detected: vboxwrapper 26206
2025-06-03 06:27:37 (268726): Detected: BOINC client v8.0.2
2025-06-03 06:27:37 (268726): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-03 06:27:37 (268726): Successfully copied 'init_data.xml' to the shared directory.
2025-06-03 06:27:38 (268726): Create VM. (boinc_5208d52342609e72, slot#5)
2025-06-03 06:27:38 (268726): Setting Memory Size for VM. (4000MB)
2025-06-03 06:27:38 (268726): Setting CPU Count for VM. (4)
2025-06-03 06:27:38 (268726): Setting Chipset Options for VM.
2025-06-03 06:27:38 (268726): Setting Graphics Controller Options for VM.
2025-06-03 06:27:38 (268726): Setting Boot Options for VM.
2025-06-03 06:27:38 (268726): Setting Network Configuration for NAT.
2025-06-03 06:27:38 (268726): Enabling VM Network Access.
2025-06-03 06:27:38 (268726): Disabling USB Support for VM.
2025-06-03 06:27:38 (268726): Disabling COM Port Support for VM.
2025-06-03 06:27:38 (268726): Disabling LPT Port Support for VM.
2025-06-03 06:27:38 (268726): Disabling Audio Support for VM.
2025-06-03 06:27:39 (268726): Disabling Clipboard Support for VM.
2025-06-03 06:27:39 (268726): Disabling Drag and Drop Support for VM.
2025-06-03 06:27:39 (268726): Adding storage controller(s) to VM.
2025-06-03 06:27:39 (268726): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-03 06:27:39 (268726): Adding VirtualBox Guest Additions to VM.
2025-06-03 06:27:39 (268726): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-03 06:27:39 (268726): forwarding host port 46745 to guest port 80
2025-06-03 06:27:39 (268726): Enabling remote desktop for VM.
2025-06-03 06:27:39 (268726): Required extension pack not installed, remote desktop not enabled.
2025-06-03 06:27:39 (268726): Enabling shared directory for VM.
2025-06-03 06:27:39 (268726): Starting VM using VBoxManage interface. (boinc_5208d52342609e72, slot#5)
2025-06-03 06:27:40 (268726): Successfully started VM. (PID = '269211')
2025-06-03 06:27:40 (268726): Reporting VM Process ID to BOINC.
2025-06-03 06:27:40 (268726): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-03 06:27:40 (268726): Guest Log: CPUID EDX: 0x178bfbff
2025-06-03 06:27:40 (268726): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-03 06:27:40 (268726): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-03 06:27:40 (268726): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-03 06:27:40 (268726): Detected: Web Application Enabled (http://localhost:46745)
2025-06-03 06:27:40 (268726): Preference change detected
2025-06-03 06:27:40 (268726): Setting CPU throttle for VM. (100%)
2025-06-03 06:27:41 (268726): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-03 06:27:42 (268726): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-03 06:27:42 (268726): Guest Log: BIOS: Booting from Hard Disk...
2025-06-03 06:27:45 (268726): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-03 06:27:45 (268726): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-03 06:27:45 (268726): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-03 06:27:50 (268726): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-03 06:27:50 (268726): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-03 06:27:58 (268726): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-03 06:27:58 (268726): Guest Log: 00:00:00.000191 main     Log opened 2025-06-03T04:27:55.532798000Z
2025-06-03 06:27:58 (268726): Guest Log: 00:00:00.000303 main     OS Product: Linux
2025-06-03 06:27:58 (268726): Guest Log: 00:00:00.000345 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-03 06:27:58 (268726): Guest Log: 00:00:00.000378 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-03 06:27:58 (268726): Guest Log: 00:00:00.000417 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-03 06:27:58 (268726): Guest Log: 00:00:00.000419 main     Process ID: 1288
2025-06-03 06:27:58 (268726): Guest Log: 00:00:00.000419 main     Package type: LINUX_64BITS_GENERIC
2025-06-03 06:27:58 (268726): Guest Log: 00:00:00.001691 main     5.2.32 r132073 started. Verbose level = 0
2025-06-03 06:28:07 (268726): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-03 06:28:07 (268726): Guest Log: [INFO] Mounting shared directory
2025-06-03 06:28:07 (268726): Guest Log: [INFO] Checking for init_data.xml
2025-06-03 06:29:53 (268726): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-03 06:29:53 (268726): Guest Log: [INFO] Detected branch: prod
2025-06-03 06:29:53 (268726): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-03 06:29:53 (268726): Guest Log: Copying input files
2025-06-03 06:29:54 (268726): Guest Log: Copied input files into RunAtlas.
2025-06-03 06:29:54 (268726): Guest Log: Detected user-configured HTTP proxy at http://172.19.229.100:3128 - will set in /etc/cvmfs/default.local
2025-06-03 06:30:03 (268726): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-03 06:30:03 (268726): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-03 06:30:03 (268726): Guest Log: 2.6.3.0 1605 1 29612 146729 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://172.19.229.100:3128 1
2025-06-03 06:30:06 (268726): Guest Log: copied the webapp to /var/www
2025-06-03 06:30:06 (268726): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-03 06:30:06 (268726): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-03 06:30:06 (268726): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-03 06:30:06 (268726): Guest Log:  *** Starting ATLAS job. (PandaID=6677393237 taskID=45006595) ***
2025-06-03 08:06:44 (268726): Status Report: Elapsed Time: '6000.000000'
2025-06-03 08:06:44 (268726): Status Report: CPU Time: '20375.130000'
2025-06-03 09:12:59 (268726): Guest Log:  *** Job finished ***
2025-06-03 09:12:59 (268726): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:09,594 | INFO     | [job] validate thread has finished
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:10,073 | INFO     | [data] copytool_out thread has finished
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:11,638 | INFO     | [data] queue_monitor thread has finished
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:12,733 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309075507008)>', '<ExcThread(monitor, started 140308478138112)>']
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:13,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:13,130 | INFO     | [monitor] control thread has ended
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,739 | INFO     | all workflow threads have been joined
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,740 | INFO     | end of generic workflow (traces error code: 0)
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,740 | INFO     | traces error code: 0
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,841 [wrapper] ==== pilot stdout END ====
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,849 [wrapper] ==== wrapper stdout RESUME ====
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,856 [wrapper] pilotpid: 5908
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,863 [wrapper] Pilot exit status: 0
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,892 [wrapper] pandaids: 6677393237
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,931 [wrapper] cleanup supervisor_pilot  7927 5909
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,938 [wrapper] Test setup, not cleaning
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,944 [wrapper] apfmon messages muted
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,950 [wrapper] ==== wrapper stdout END ====
2025-06-03 09:12:59 (268726): Guest Log: 2025-06-03 07:12:17,956 [wrapper] ==== wrapper stderr END ====
2025-06-03 09:12:59 (268726): Guest Log:  *** Error codes and diagnostics ***
2025-06-03 09:12:59 (268726): Guest Log:     "exeErrorCode": 0,
2025-06-03 09:12:59 (268726): Guest Log:     "exeErrorDiag": "",
2025-06-03 09:12:59 (268726): Guest Log:     "pilotErrorCode": 0,
2025-06-03 09:12:59 (268726): Guest Log:     "pilotErrorDiag": "",
2025-06-03 09:12:59 (268726): Guest Log:  *** Listing of results directory ***
2025-06-03 09:12:59 (268726): Guest Log: total 173952
2025-06-03 09:12:59 (268726): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  2 18:47 pilot3.tar.gz
2025-06-03 09:12:59 (268726): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  2 19:00 runpilot2-wrapper.sh
2025-06-03 09:12:59 (268726): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  2 19:00 queuedata.json
2025-06-03 09:12:59 (268726): Guest Log: -rw-r--r--. 1 atlas atlas    508877 Jun  3 04:29 input.tar.gz
2025-06-03 09:12:59 (268726): Guest Log: -rw-r--r--. 1 atlas atlas     15093 Jun  3 04:29 start_atlas.sh
2025-06-03 09:12:59 (268726): Guest Log: -rw-r--r--. 1 atlas atlas      9491 Jun  3 04:29 init_data.xml
2025-06-03 09:12:59 (268726): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  3 04:29 EVNT.45006593._000337.pool.root.1 -> /data/./ATLAS.root_0
2025-06-03 09:12:59 (268726): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Jun  3 04:30 pandaJob.out
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas    988073 Jun  3 04:30 agis_schedconf.cvmfs.json
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  3 04:30 agis_ddmendpoints.agis.ALL.json
2025-06-03 09:12:59 (268726): Guest Log: drwx------. 4 atlas atlas      4096 Jun  3 04:30 pilot3
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas 172185695 Jun  3 07:11 HITS.45006595._008414.pool.root.1
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas      1033 Jun  3 07:11 memory_monitor_summary.json
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas        95 Jun  3 07:11 pilot_heartbeat.json
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas    281117 Jun  3 07:11 log.45006595._008414.job.log.tgz.1
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas      7696 Jun  3 07:12 heartbeat.json
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas      4599 Jun  3 07:12 pilotlog.txt
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas    803513 Jun  3 07:12 log.45006595._008414.job.log.1
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas       357 Jun  3 07:12 output.list
2025-06-03 09:12:59 (268726): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  3 07:12 runtime_log
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas   1105920 Jun  3 07:12 result.tar.gz
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas       654 Jun  3 07:12 SEtMDmyZPg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkJWKDmKV3ihm.diag
2025-06-03 09:12:59 (268726): Guest Log: -rw-r--r--. 1 atlas atlas      8579 Jun  3 07:12 runtime_log.err
2025-06-03 09:12:59 (268726): Guest Log: Looking for outputfile HITS.45006595._008414.pool.root.1
2025-06-03 09:12:59 (268726): Guest Log: HITS file was successfully produced
2025-06-03 09:12:59 (268726): Guest Log: -rw-------. 1 atlas atlas 172185695 Jun  3 07:11 /home/atlas/RunAtlas/HITS.45006595._008414.pool.root.1
2025-06-03 09:13:00 (268726): Guest Log: Successfully finished the ATLAS job!
2025-06-03 09:13:00 (268726): Guest Log: Copying the results back to the shared directory!
2025-06-03 09:13:00 (268726): Guest Log:  *** Contents of shared directory: ***
2025-06-03 09:13:00 (268726): Guest Log: total 212340
2025-06-03 09:13:00 (268726): Guest Log: -rw-r--r--. 1 root root 215788132 Jun  3 04:27 ATLAS.root_0
2025-06-03 09:13:00 (268726): Guest Log: -rw-r--r--. 1 root root      9491 Jun  3 04:27 init_data.xml
2025-06-03 09:13:00 (268726): Guest Log: -rw-r--r--. 1 root root    508877 Jun  3 04:27 input.tar.gz
2025-06-03 09:13:00 (268726): Guest Log: -rw-r--r--. 1 root root   1105920 Jun  3  2025 result.tar.gz
2025-06-03 09:13:00 (268726): Guest Log: -rw-r--r--. 1 root root     15093 Jun  3 04:27 start_atlas.sh
2025-06-03 09:13:00 (268726): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-03 09:13:00 (268726): VM Completion File Detected.
2025-06-03 09:13:00 (268726): Powering off VM.
2025-06-03 09:13:00 (268726): Successfully stopped VM.
2025-06-03 09:13:00 (268726): Deregistering VM. (boinc_5208d52342609e72, slot#5)
2025-06-03 09:13:01 (268726): Removing network bandwidth throttle group from VM.
2025-06-03 09:13:01 (268726): Removing VM from VirtualBox.
09:13:06 (268726): called boinc_finish(0)

</stderr_txt>
]]>

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