Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:32:50 (27556): wrapper (7.7.26015): starting
08:32:50 (27556): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:32:50] Arguments: --nthreads 8
[2025-06-03 08:32:50] Threads: 8
[2025-06-03 08:32:50] Checking for CVMFS
[2025-06-03 08:32:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:32:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:32:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:32:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:32:51] 2.11.2.0 27084 31400 90452 146731 1 114 22812366 25165824 4097 130560 0 15547685 99.814 17852999 2106 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:32:51] CVMFS is ok
[2025-06-03 08:32:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:32:51] Checking for apptainer binary...
[2025-06-03 08:32:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:32:51] Running /usr/bin/apptainer --version
[2025-06-03 08:32:51] apptainer version 1.3.2-1.el7
[2025-06-03 08:32:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:32:52] cg-vwn405.simple-grid.lan
[2025-06-03 08:32:52] apptainer works
[2025-06-03 08:32:52] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:32:52] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:32:52] Starting ATLAS job with PandaID=6677398085
[2025-06-03 08:32:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:15:22]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:15:22] 2025-06-03 10:13:30,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:15:22] 2025-06-03 10:13:30,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:15:22] 2025-06-03 10:13:30,425 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:15:22] 2025-06-03 10:13:30,425 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 12:15:22] 2025-06-03 10:13:30,427 | INFO     | sum of deviations: -39191875603.99999
[2025-06-03 12:15:22] 2025-06-03 10:13:30,427 | INFO     | mean x: 1748938980.0
[2025-06-03 12:15:22] 2025-06-03 10:13:30,427 | INFO     | mean y: 2524607.3488372094
[2025-06-03 12:15:22] 2025-06-03 10:13:30,428 | INFO     | -- intersect: 22245162770.482784
[2025-06-03 12:15:22] 2025-06-03 10:13:30,428 | INFO     | intersect: 22245162770.482784
[2025-06-03 12:15:22] 2025-06-03 10:13:30,428 | INFO     | chi2: 2.749347478389353
[2025-06-03 12:15:22] 2025-06-03 10:13:30,429 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 12:15:22] 2025-06-03 10:13:30,430 | INFO     | sum of deviations: -23698681322.499992
[2025-06-03 12:15:22] 2025-06-03 10:13:30,431 | INFO     | mean x: 1748938827.5
[2025-06-03 12:15:22] 2025-06-03 10:13:30,431 | INFO     | mean y: 2535663.1761904764
[2025-06-03 12:15:22] 2025-06-03 10:13:30,431 | INFO     | -- intersect: 14436058389.148663
[2025-06-03 12:15:22] 2025-06-03 10:13:30,431 | INFO     | intersect: 14436058389.148663
[2025-06-03 12:15:22] 2025-06-03 10:13:30,431 | INFO     | chi2: 1.9870097184942894
[2025-06-03 12:15:22] 2025-06-03 10:13:30,432 | INFO     | current chi2=1.9870097184942894 (change=27.727952391876737 %)
[2025-06-03 12:15:22] 2025-06-03 10:13:30,432 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 12:15:22] 2025-06-03 10:13:30,434 | INFO     | sum of deviations: -22531454344.000004
[2025-06-03 12:15:22] 2025-06-03 10:13:30,434 | INFO     | mean x: 1748938675.0
[2025-06-03 12:15:22] 2025-06-03 10:13:30,434 | INFO     | mean y: 2536552.136585366
[2025-06-03 12:15:22] 2025-06-03 10:13:30,434 | INFO     | -- intersect: 14753966931.373178
[2025-06-03 12:15:22] 2025-06-03 10:13:30,434 | INFO     | intersect: 14753966931.373178
[2025-06-03 12:15:22] 2025-06-03 10:13:30,435 | INFO     | chi2: 1.9857380179084325
[2025-06-03 12:15:22] 2025-06-03 10:13:30,435 | INFO     | current chi2=1.9857380179084325 (change=0.06400072299699525 %)
[2025-06-03 12:15:22] 2025-06-03 10:13:30,435 | INFO     | right removable region: 204
[2025-06-03 12:15:22] 2025-06-03 10:13:30,435 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 12:15:22] 2025-06-03 10:13:30,437 | INFO     | sum of deviations: -78485093161.49997
[2025-06-03 12:15:22] 2025-06-03 10:13:30,438 | INFO     | mean x: 1748939132.5
[2025-06-03 12:15:22] 2025-06-03 10:13:30,438 | INFO     | mean y: 2552897.3
[2025-06-03 12:15:22] 2025-06-03 10:13:30,438 | INFO     | -- intersect: 47803380206.39432
[2025-06-03 12:15:22] 2025-06-03 10:13:30,438 | INFO     | intersect: 47803380206.39432
[2025-06-03 12:15:22] 2025-06-03 10:13:30,438 | INFO     | chi2: 1.000620234964059
[2025-06-03 12:15:22] 2025-06-03 10:13:30,439 | INFO     | current chi2=1.000620234964059 (change=63.605173852006104 %)
[2025-06-03 12:15:22] 2025-06-03 10:13:30,439 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 12:15:22] 2025-06-03 10:13:30,440 | INFO     | sum of deviations: -75588465370.00005
[2025-06-03 12:15:22] 2025-06-03 10:13:30,441 | INFO     | mean x: 1748939285.0
[2025-06-03 12:15:22] 2025-06-03 10:13:30,441 | INFO     | mean y: 2550661.3609756096
[2025-06-03 12:15:22] 2025-06-03 10:13:30,441 | INFO     | -- intersect: 49490628805.86228
[2025-06-03 12:15:22] 2025-06-03 10:13:30,441 | INFO     | intersect: 49490628805.86228
[2025-06-03 12:15:22] 2025-06-03 10:13:30,441 | INFO     | chi2: 0.9892348749235914
[2025-06-03 12:15:22] 2025-06-03 10:13:30,441 | INFO     | current chi2=0.9892348749235914 (change=1.1378302819227395 %)
[2025-06-03 12:15:22] 2025-06-03 10:13:30,442 | INFO     | left removable region: 20
[2025-06-03 12:15:22] 2025-06-03 10:13:30,442 | INFO     | sum of square deviations: 1931608310.0
[2025-06-03 12:15:22] 2025-06-03 10:13:30,443 | INFO     | sum of deviations: -46725417602.5
[2025-06-03 12:15:22] 2025-06-03 10:13:30,443 | INFO     | mean x: 1748939254.5
[2025-06-03 12:15:22] 2025-06-03 10:13:30,443 | INFO     | mean y: 2554832.407608696
[2025-06-03 12:15:22] 2025-06-03 10:13:30,444 | INFO     | -- intersect: 42309225706.026665
[2025-06-03 12:15:22] 2025-06-03 10:13:30,444 | INFO     | intersect: 42309225706.026665
[2025-06-03 12:15:22] 2025-06-03 10:13:30,444 | INFO     | chi2: 0.18669338415636003
[2025-06-03 12:15:22] 2025-06-03 10:13:30,444 | INFO     | -- intersect: 42309225706.026665
[2025-06-03 12:15:22] 2025-06-03 10:13:30,444 | INFO     | current memory leak: -24.19 B/s (using 184 data points, chi2=0.19)
[2025-06-03 12:15:22] 2025-06-03 10:13:30,445 | INFO     | ..............................
[2025-06-03 12:15:22] 2025-06-03 10:13:30,445 | INFO     | . Timing measurements:
[2025-06-03 12:15:22] 2025-06-03 10:13:30,445 | INFO     | . get job = 0 s
[2025-06-03 12:15:22] 2025-06-03 10:13:30,446 | INFO     | . initial setup = 2 s
[2025-06-03 12:15:22] 2025-06-03 10:13:30,446 | INFO     | . payload setup = 16 s
[2025-06-03 12:15:22] 2025-06-03 10:13:30,446 | INFO     | . stage-in = 0 s
[2025-06-03 12:15:22] 2025-06-03 10:13:30,446 | INFO     | . payload execution = 13083 s
[2025-06-03 12:15:22] 2025-06-03 10:13:30,446 | INFO     | . stage-out = 3 s
[2025-06-03 12:15:22] 2025-06-03 10:13:30,446 | INFO     | . log creation = 1 s
[2025-06-03 12:15:22] 2025-06-03 10:13:30,446 | INFO     | ..............................
[2025-06-03 12:15:22] 2025-06-03 10:13:30,579 | INFO     | 
[2025-06-03 12:15:22] 2025-06-03 10:13:30,580 | INFO     | job summary report
[2025-06-03 12:15:22] 2025-06-03 10:13:30,580 | INFO     | --------------------------------------------------
[2025-06-03 12:15:22] 2025-06-03 10:13:30,580 | INFO     | PanDA job id: 6677398085
[2025-06-03 12:15:22] 2025-06-03 10:13:30,580 | INFO     | task id: 45006595
[2025-06-03 12:15:22] 2025-06-03 10:13:30,580 | INFO     | errors: (none)
[2025-06-03 12:15:22] 2025-06-03 10:13:30,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:15:22] 2025-06-03 10:13:30,580 | INFO     | pilot state: finished 
[2025-06-03 12:15:22] 2025-06-03 10:13:30,580 | INFO     | transexitcode: 0
[2025-06-03 12:15:22] 2025-06-03 10:13:30,580 | INFO     | exeerrorcode: 0
[2025-06-03 12:15:22] 2025-06-03 10:13:30,580 | INFO     | exeerrordiag: 
[2025-06-03 12:15:22] 2025-06-03 10:13:30,580 | INFO     | exitcode: 0
[2025-06-03 12:15:22] 2025-06-03 10:13:30,581 | INFO     | exitmsg: OK
[2025-06-03 12:15:22] 2025-06-03 10:13:30,581 | INFO     | cpuconsumptiontime: 49583 s
[2025-06-03 12:15:22] 2025-06-03 10:13:30,581 | INFO     | nevents: 400
[2025-06-03 12:15:22] 2025-06-03 10:13:30,581 | INFO     | neventsw: 0
[2025-06-03 12:15:22] 2025-06-03 10:13:30,581 | INFO     | pid: 7350
[2025-06-03 12:15:22] 2025-06-03 10:13:30,581 | INFO     | pgrp: 7350
[2025-06-03 12:15:22] 2025-06-03 10:13:30,581 | INFO     | corecount: 8
[2025-06-03 12:15:22] 2025-06-03 10:13:30,581 | INFO     | event service: False
[2025-06-03 12:15:22] 2025-06-03 10:13:30,581 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405444, 13104: 2434865, 13108: 2443806, 13109: 2443862, 13198: 2444160}
[2025-06-03 12:15:22] 2025-06-03 10:13:30,581 | INFO     | --------------------------------------------------
[2025-06-03 12:15:22] 2025-06-03 10:13:30,581 | INFO     | 
[2025-06-03 12:15:22] 2025-06-03 10:13:30,582 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 12:15:22] 2025-06-03 10:13:30,621 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,622 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,622 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,622 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,622 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,622 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,622 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,622 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,623 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,623 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,623 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,623 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,623 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,623 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,623 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,623 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,623 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:15:22] 2025-06-03 10:13:30,623 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,624 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:15:22] 2025-06-03 10:13:30,624 | INFO     | job 6677398085 has completed (purged errors)
[2025-06-03 12:15:22] 2025-06-03 10:13:30,624 | INFO     | overall cleanup function is called
[2025-06-03 12:15:22] 2025-06-03 10:13:31,632 | INFO     | --- collectZombieJob: --- 10, [7350]
[2025-06-03 12:15:22] 2025-06-03 10:13:31,633 | INFO     | zombie collector waiting for pid 7350
[2025-06-03 12:15:22] 2025-06-03 10:13:31,633 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:15:22] 2025-06-03 10:13:31,633 | INFO     | collected zombie processes
[2025-06-03 12:15:22] 2025-06-03 10:13:31,633 | INFO     | will attempt to kill all subprocesses of pid=7350
[2025-06-03 12:15:22] 2025-06-03 10:13:31,768 | INFO     | process IDs to be killed: [7350] (in reverse order)
[2025-06-03 12:15:22] 2025-06-03 10:13:32,619 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:15:22] 2025-06-03 10:13:32,619 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:15:22] 2025-06-03 10:13:32,623 | INFO     | did not find any defunct processes belonging to 7350
[2025-06-03 12:15:22] 2025-06-03 10:13:32,626 | INFO     | did not find any defunct processes belonging to 7350
[2025-06-03 12:15:22] 2025-06-03 10:13:32,627 | INFO     | ready for new job
[2025-06-03 12:15:22] 2025-06-03 10:13:32,627 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:15:22] 2025-06-03 10:13:32,629 | INFO     | **************************************
[2025-06-03 12:15:22] 2025-06-03 10:13:32,629 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:15:22] 2025-06-03 10:13:32,629 | INFO     | **************************************
[2025-06-03 12:15:22] 2025-06-03 10:13:32,629 | INFO     | 
[2025-06-03 12:15:22] 2025-06-03 10:13:32,630 | INFO     | pilot is running in a VM
[2025-06-03 12:15:22] 2025-06-03 10:13:32,630 | INFO     | architecture information:
[2025-06-03 12:15:22] 2025-06-03 10:13:32,645 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:15:22] 2025-06-03 10:13:32,823 | INFO     | PID=31229 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 12:15:22] 2025-06-03 10:13:32,823 | INFO     | .. there are 9 such processes running
[2025-06-03 12:15:22] 2025-06-03 10:13:32,836 | INFO     | cat /etc/os-release:
[2025-06-03 12:15:22] NAME="CentOS Linux"
[2025-06-03 12:15:22] VERSION="7 (Core)"
[2025-06-03 12:15:22] ID="centos"
[2025-06-03 12:15:22] ID_LIKE="rhel fedora"
[2025-06-03 12:15:22] VERSION_ID="7"
[2025-06-03 12:15:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:15:22] ANSI_COLOR="0;31"
[2025-06-03 12:15:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:15:22] HOME_URL="https://www.centos.org/"
[2025-06-03 12:15:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:15:22] 
[2025-06-03 12:15:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:15:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:15:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:15:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:15:22] 
[2025-06-03 12:15:22] 2025-06-03 10:13:32,836 | INFO     | **************************************
[2025-06-03 12:15:22] 2025-06-03 10:13:33,340 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 12:15:22] 2025-06-03 10:13:33,552 | INFO     | sufficient remaining disk space (496579379200 B)
[2025-06-03 12:15:22] 2025-06-03 10:13:33,553 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:15:22] 2025-06-03 10:13:33,553 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:15:22] 2025-06-03 10:13:33,553 | INFO     | update_server=False
[2025-06-03 12:15:22] 2025-06-03 10:13:33,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:15:22] 2025-06-03 10:13:33,555 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:15:22] 2025-06-03 10:13:33,555 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:15:22] 2025-06-03 10:13:33,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:15:22] 2025-06-03 10:13:33,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:15:22] 2025-06-03 10:13:33,649 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:15:22] 2025-06-03 10:13:33,773 | INFO     | all job control threads have been joined
[2025-06-03 12:15:22] 2025-06-03 10:13:33,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:15:22] 2025-06-03 10:13:33,967 | INFO     | aborting loop
[2025-06-03 12:15:22] 2025-06-03 10:13:34,116 | INFO     | all data control threads have been joined
[2025-06-03 12:15:22] 2025-06-03 10:13:34,245 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:15:22] 2025-06-03 10:13:34,560 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:34,564 | INFO     | all payload control threads have been joined
[2025-06-03 12:15:22] 2025-06-03 10:13:34,581 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:34,780 | INFO     | [job] control thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:34,973 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:34,985 | INFO     | [job] validate thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:35,122 | INFO     | [data] control thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:35,198 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:35,261 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:35,297 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:35,570 | INFO     | [payload] control thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:35,590 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:35,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:15:22] 2025-06-03 10:13:35,965 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:36,252 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:36,601 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:37,658 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:43,633 | INFO     | job.realtimelogging is not enabled
[2025-06-03 12:15:22] 2025-06-03 10:13:44,639 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:15:22] 2025-06-03 10:13:45,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139855109863232)>', '<ExcThread(monitor, started 139854882965248)>']
[2025-06-03 12:15:22] 2025-06-03 10:13:46,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:15:22] 2025-06-03 10:13:46,632 | INFO     | [monitor] control thread has ended
[2025-06-03 12:15:22] 2025-06-03 10:13:50,972 | INFO     | all workflow threads have been joined
[2025-06-03 12:15:22] 2025-06-03 10:13:50,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:15:22] 2025-06-03 10:13:50,973 | INFO     | traces error code: 0
[2025-06-03 12:15:22] 2025-06-03 10:13:50,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:15:22] 2025-06-03 10:13:51,305 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:15:22] 2025-06-03 10:13:51,390 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:15:22] 2025-06-03 10:13:51,453 [wrapper] pilotpid: 31229
[2025-06-03 12:15:22] 2025-06-03 10:13:51,486 [wrapper] Pilot exit status: 0
[2025-06-03 12:15:22] 2025-06-03 10:13:51,712 [wrapper] pandaids: 6677398085
[2025-06-03 12:15:22] 2025-06-03 10:13:52,068 [wrapper] cleanup supervisor_pilot 14620 31230
[2025-06-03 12:15:22] 2025-06-03 10:13:52,148 [wrapper] Test setup, not cleaning
[2025-06-03 12:15:22] 2025-06-03 10:13:52,200 [wrapper] apfmon messages muted
[2025-06-03 12:15:22] 2025-06-03 10:13:52,286 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:15:22] 2025-06-03 10:13:52,357 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:15:22]  *** Error codes and diagnostics ***
[2025-06-03 12:15:22]     "exeErrorCode": 0,
[2025-06-03 12:15:22]     "exeErrorDiag": "",
[2025-06-03 12:15:22]     "pilotErrorCode": 0,
[2025-06-03 12:15:22]     "pilotErrorDiag": "",
[2025-06-03 12:15:22]  *** Listing of results directory ***
[2025-06-03 12:15:22] total 391000
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:34 pilot3.tar.gz
[2025-06-03 12:15:22] -rwx------. 1 boinc boinc     37140 Jun  2 22:09 runpilot2-wrapper.sh
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc      5111 Jun  2 22:09 queuedata.json
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:15:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:32 run_atlas
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:32 job.xml
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc      6392 Jun  3 08:32 init_data.xml
[2025-06-03 12:15:22] -rw-r--r--. 2 boinc boinc 214086634 Jun  3 08:32 EVNT.45006593._000426.pool.root.1
[2025-06-03 12:15:22] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:32 start_atlas.sh
[2025-06-03 12:15:22] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:32 shared
[2025-06-03 12:15:22] -rw-r--r--. 2 boinc boinc    508873 Jun  3 08:32 input.tar.gz
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:32 boinc_lockfile
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc      2524 Jun  3 08:32 pandaJob.out
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc    986901 Jun  3 08:33 agis_schedconf.cvmfs.json
[2025-06-03 12:15:22] drwx------. 4 boinc boinc      4096 Jun  3 08:33 pilot3
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc 179420064 Jun  3 12:10 HITS.45006595._010644.pool.root.1
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc       531 Jun  3 12:11 boinc_task_state.xml
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc      1017 Jun  3 12:11 memory_monitor_summary.json
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc   1603667 Jun  3 12:11 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc    383049 Jun  3 12:12 log.45006595._010644.job.log.tgz.1
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc        95 Jun  3 12:13 pilot_heartbeat.json
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc      7706 Jun  3 12:13 heartbeat.json
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc      5003 Jun  3 12:13 pilotlog.txt
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc   1142812 Jun  3 12:13 log.45006595._010644.job.log.1
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc       357 Jun  3 12:13 output.list
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:13 runtime_log
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc   1546240 Jun  3 12:13 result.tar.gz
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc       656 Jun  3 12:13 dHyKDm6dQg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQVgKDmOSKMXm.diag
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc      8659 Jun  3 12:13 runtime_log.err
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc      8192 Jun  3 12:15 boinc_mmap_file
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc        28 Jun  3 12:15 wrapper_checkpoint.txt
[2025-06-03 12:15:22] -rw-r--r--. 1 boinc boinc     20560 Jun  3 12:15 stderr.txt
[2025-06-03 12:15:22] HITS file was successfully produced:
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc 179420064 Jun  3 12:10 shared/HITS.pool.root.1
[2025-06-03 12:15:22]  *** Contents of shared directory: ***
[2025-06-03 12:15:22] total 386316
[2025-06-03 12:15:22] -rw-r--r--. 2 boinc boinc 214086634 Jun  3 08:32 ATLAS.root_0
[2025-06-03 12:15:22] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:32 start_atlas.sh
[2025-06-03 12:15:22] -rw-r--r--. 2 boinc boinc    508873 Jun  3 08:32 input.tar.gz
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc 179420064 Jun  3 12:10 HITS.pool.root.1
[2025-06-03 12:15:22] -rw-------. 1 boinc boinc   1546240 Jun  3 12:13 result.tar.gz
12:15:24 (27556): run_atlas exited; CPU time 49751.645762
12:15:24 (27556): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN