Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:36:43 (413464): wrapper (7.7.26015): starting
14:36:43 (413464): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 14:36:43] Arguments: --nthreads 12
[2025-06-02 14:36:43] Threads: 12
[2025-06-02 14:36:43] Checking for CVMFS
[2025-06-02 14:36:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 14:36:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 14:36:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 14:36:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 14:36:44] 2.11.5.0 3404812 30835 199808 146720 3 222 38118869 45568000 15020 130560 0 315468383 99.784 199936001 26203 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 14:36:44] CVMFS is ok
[2025-06-02 14:36:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 14:36:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 14:36:44] Further information can be found at the LHC@home message board.
[2025-06-02 14:36:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 14:36:44] Checking for apptainer binary...
[2025-06-02 14:36:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 14:36:44] Running /usr/bin/apptainer --version
[2025-06-02 14:36:45] apptainer version 1.4.0-1.el9
[2025-06-02 14:36:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 14:36:45] wns0083.triumf.lcg
[2025-06-02 14:36:45] apptainer works
[2025-06-02 14:36:45] Set ATHENA_PROC_NUMBER=12
[2025-06-02 14:36:45] Set ATHENA_CORE_NUMBER=12
[2025-06-02 14:36:45] Starting ATLAS job with PandaID=6677398090
[2025-06-02 14:36:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 14:40:49]  *** The last 200 lines of the pilot log: ***
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | WARNING  | wrong length of table data, x=[1748900289.0], y=[1944.0] (must be same and length>=4)
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | ..............................
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . Timing measurements:
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . get job = 0 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . initial setup = 3 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . payload setup = 13 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . stage-in = 0 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . payload execution = 30 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . stage-out = 0 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . log creation = 0 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | ..............................
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 14:40:49] 2025-06-02 21:40:36,693 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677398090/pilotlog.txt
[2025-06-02 14:40:49] 2025-06-02 21:40:36,705 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 14:40:49] - Log from pilotlog.txt -
[2025-06-02 14:40:49] 2025-06-02 21:40:36,690 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 14:40:49] 2025-06-02 21:40:36,690 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677398090/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | INFO     | extracted standard info from prmon json
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | WARNING  | wrong length of table data, x=[1748900289.0], y=[1944.0] (must be same and length>=4)
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | ..............................
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . Timing measurements:
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . get job = 0 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . initial setup = 3 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . payload setup = 13 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . stage-in = 0 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . payload execution = 30 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . stage-out = 0 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . log creation = 0 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | ..............................
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 14:40:49] 2025-06-02 21:40:36,693 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677398090/pilotlog.txt
[2025-06-02 14:40:49] 2025-06-02 21:40:36,705 | WARNING  | 
[2025-06-02 14:40:49] [begin log extracts]
[2025-06-02 14:40:49] - Log from pilotlog.txt -
[2025-06-02 14:40:49] 2025-06-02 21:40:36,690 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 14:40:49] 2025-06-02 21:40:36,690 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677398090/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | INFO     | extracted standard info from prmon json
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 14:40:49] 2025-06-02 21:40:36,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | WARNING  | wrong length of table data, x=[1748900289.0], y=[1944.0] (must be same and length>=4)
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | ..............................
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . Timing measurements:
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . get job = 0 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . initial setup = 3 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . payload setup = 13 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . stage-in = 0 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . payload execution = 30 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . stage-out = 0 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | . log creation = 0 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | ..............................
[2025-06-02 14:40:49] 2025-06-02 21:40:36,692 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 14:40:49] 2025-06-02 21:40:36,693 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677398090/pilotlog.txt
[2025-06-02 14:40:49] [end log extracts]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,706 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 14:40:49] 2025-06-02 21:40:36,706 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 14:40:49] 2025-06-02 21:40:36,765 | INFO     | 
[2025-06-02 14:40:49] 2025-06-02 21:40:36,765 | INFO     | job summary report
[2025-06-02 14:40:49] 2025-06-02 21:40:36,765 | INFO     | --------------------------------------------------
[2025-06-02 14:40:49] 2025-06-02 21:40:36,765 | INFO     | PanDA job id: 6677398090
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | task id: 45006595
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 14:38:23,716 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | pilot state: failed 
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | transexitcode: 65
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | exeerrorcode: 65
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | exitcode: 65
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | cpuconsumptiontime: 17 s
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | nevents: 0
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | neventsw: 0
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | pid: 425239
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | pgrp: 425239
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | corecount: 12
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | event service: False
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | sizes: {0: 2405008, 1: 2405207, 11: 2405207, 16: 2405441, 22: 2405469, 47: 2428916, 48: 2433179, 173: 2433293}
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | --------------------------------------------------
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | 
[2025-06-02 14:40:49] 2025-06-02 21:40:36,766 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 14:40:49] 2025-06-02 21:40:36,786 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,786 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,786 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,786 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | job 6677398090 has completed (purged errors)
[2025-06-02 14:40:49] 2025-06-02 21:40:36,787 | INFO     | overall cleanup function is called
[2025-06-02 14:40:49] 2025-06-02 21:40:37,795 | INFO     | --- collectZombieJob: --- 10, [425239]
[2025-06-02 14:40:49] 2025-06-02 21:40:37,795 | INFO     | zombie collector waiting for pid 425239
[2025-06-02 14:40:49] 2025-06-02 21:40:37,795 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 14:40:49] 2025-06-02 21:40:37,795 | INFO     | collected zombie processes
[2025-06-02 14:40:49] 2025-06-02 21:40:37,795 | INFO     | will attempt to kill all subprocesses of pid=425239
[2025-06-02 14:40:49] 2025-06-02 21:40:38,307 | INFO     | process IDs to be killed: [425239] (in reverse order)
[2025-06-02 14:40:49] 2025-06-02 21:40:38,437 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 14:40:49] 2025-06-02 21:40:38,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 14:40:49] 2025-06-02 21:40:38,446 | INFO     | did not find any defunct processes belonging to 425239
[2025-06-02 14:40:49] 2025-06-02 21:40:38,460 | INFO     | did not find any defunct processes belonging to 425239
[2025-06-02 14:40:49] 2025-06-02 21:40:38,460 | INFO     | ready for new job
[2025-06-02 14:40:49] 2025-06-02 21:40:38,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 14:40:49] 2025-06-02 21:40:38,462 | INFO     | **************************************
[2025-06-02 14:40:49] 2025-06-02 21:40:38,462 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 14:40:49] 2025-06-02 21:40:38,462 | INFO     | **************************************
[2025-06-02 14:40:49] 2025-06-02 21:40:38,462 | INFO     | 
[2025-06-02 14:40:49] 2025-06-02 21:40:38,471 | INFO     | architecture information:
[2025-06-02 14:40:49] 2025-06-02 21:40:38,473 | INFO     | executing command: cat /etc/os-release
[2025-06-02 14:40:49] 2025-06-02 21:40:38,545 | INFO     | cat /etc/os-release:
[2025-06-02 14:40:49] NAME="CentOS Linux"
[2025-06-02 14:40:49] VERSION="7 (Core)"
[2025-06-02 14:40:49] ID="centos"
[2025-06-02 14:40:49] ID_LIKE="rhel fedora"
[2025-06-02 14:40:49] VERSION_ID="7"
[2025-06-02 14:40:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 14:40:49] ANSI_COLOR="0;31"
[2025-06-02 14:40:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 14:40:49] HOME_URL="https://www.centos.org/"
[2025-06-02 14:40:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 14:40:49] 
[2025-06-02 14:40:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 14:40:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 14:40:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 14:40:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 14:40:49] 
[2025-06-02 14:40:49] 2025-06-02 21:40:38,546 | INFO     | **************************************
[2025-06-02 14:40:49] 2025-06-02 21:40:39,049 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 14:40:49] 2025-06-02 21:40:39,067 | INFO     | sufficient remaining disk space (1863978057728 B)
[2025-06-02 14:40:49] 2025-06-02 21:40:39,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 14:40:49] 2025-06-02 21:40:39,068 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 14:40:49] 2025-06-02 21:40:39,068 | INFO     | update_server=False
[2025-06-02 14:40:49] 2025-06-02 21:40:39,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 14:40:49] 2025-06-02 21:40:39,069 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 14:40:49] 2025-06-02 21:40:39,069 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 14:40:49] 2025-06-02 21:40:39,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 14:40:49] 2025-06-02 21:40:39,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 14:40:49] 2025-06-02 21:40:39,456 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-02 14:40:49] 2025-06-02 21:40:39,456 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-02 14:40:49] 2025-06-02 21:40:39,456 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 14:40:49] 2025-06-02 21:40:39,456 | INFO     | will abort loop
[2025-06-02 14:40:49] 2025-06-02 21:40:39,741 | INFO     | all payload control threads have been joined
[2025-06-02 14:40:49] 2025-06-02 21:40:39,789 | INFO     | all job control threads have been joined
[2025-06-02 14:40:49] 2025-06-02 21:40:39,810 | INFO     | all data control threads have been joined
[2025-06-02 14:40:49] 2025-06-02 21:40:39,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 14:40:49] 2025-06-02 21:40:40,074 | INFO     | [job] retrieve thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:40,173 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:40,462 | INFO     | [job] job monitor thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:40,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 14:40:49] 2025-06-02 21:40:40,692 | INFO     | [payload] failed_post thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:40,729 | INFO     | [job] validate thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:40,747 | INFO     | [payload] control thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:40,795 | INFO     | [job] control thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:40,813 | INFO     | [payload] validate_post thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:40,816 | INFO     | [data] control thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:40,824 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:40,982 | INFO     | [data] copytool_in thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:40,995 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:41,486 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:41,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 14:40:49] 2025-06-02 21:40:42,504 | INFO     | [data] copytool_out thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:42,786 | INFO     | [job] queue monitor thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:43,961 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 14:40:49] 2025-06-02 21:40:44,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139701027272512)>', '<ExcThread(monitor, started 139700480222976)>']
[2025-06-02 14:40:49] 2025-06-02 21:40:44,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 14:40:49] 2025-06-02 21:40:44,101 | INFO     | [monitor] control thread has ended
[2025-06-02 14:40:49] 2025-06-02 21:40:49,075 | INFO     | all workflow threads have been joined
[2025-06-02 14:40:49] 2025-06-02 21:40:49,075 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 14:40:49] 2025-06-02 21:40:49,075 | INFO     | traces error code: 0
[2025-06-02 14:40:49] 2025-06-02 21:40:49,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 14:40:49] 2025-06-02 21:40:49,377 [wrapper] ==== pilot stdout END ====
[2025-06-02 14:40:49] 2025-06-02 21:40:49,380 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 14:40:49] 2025-06-02 21:40:49,384 [wrapper] pilotpid: 417028
[2025-06-02 14:40:49] 2025-06-02 21:40:49,386 [wrapper] Pilot exit status: 0
[2025-06-02 14:40:49] 2025-06-02 21:40:49,406 [wrapper] pandaids: 6677398090
[2025-06-02 14:40:49] 2025-06-02 21:40:49,452 [wrapper] cleanup supervisor_pilot  417034 417029
[2025-06-02 14:40:49] 2025-06-02 21:40:49,456 [wrapper] Test setup, not cleaning
[2025-06-02 14:40:49] 2025-06-02 21:40:49,459 [wrapper] apfmon messages muted
[2025-06-02 14:40:49] 2025-06-02 21:40:49,461 [wrapper] ==== wrapper stdout END ====
[2025-06-02 14:40:49] 2025-06-02 21:40:49,463 [wrapper] ==== wrapper stderr END ====
[2025-06-02 14:40:49]  *** Error codes and diagnostics ***
[2025-06-02 14:40:49]     "exeErrorCode": 65,
[2025-06-02 14:40:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 14:40:49]     "pilotErrorCode": 1305,
[2025-06-02 14:40:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 14:40:49]  *** Listing of results directory ***
[2025-06-02 14:40:49] total 213016
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc    495897 Jun  2 12:34 pilot3.tar.gz
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc      5111 Jun  2 13:09 queuedata.json
[2025-06-02 14:40:49] -rwx------. 1 boinc boinc     37140 Jun  2 13:09 runpilot2-wrapper.sh
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc       100 Jun  2 14:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 14:40:49] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 14:36 run_atlas
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc       105 Jun  2 14:36 job.xml
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc      6602 Jun  2 14:36 init_data.xml
[2025-06-02 14:40:49] -rw-r--r--. 2 boinc boinc 214086634 Jun  2 14:36 EVNT.45006593._000426.pool.root.1
[2025-06-02 14:40:49] -rw-r--r--. 2 boinc boinc     15093 Jun  2 14:36 start_atlas.sh
[2025-06-02 14:40:49] drwxrwx--x. 2 boinc boinc      4096 Jun  2 14:36 shared
[2025-06-02 14:40:49] -rw-r--r--. 2 boinc boinc    508880 Jun  2 14:36 input.tar.gz
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc         0 Jun  2 14:36 boinc_lockfile
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc      2524 Jun  2 14:36 pandaJob.out
[2025-06-02 14:40:49] -rw-------. 1 boinc boinc    987967 Jun  2 14:37 agis_schedconf.cvmfs.json
[2025-06-02 14:40:49] -rw-------. 1 boinc boinc   1603667 Jun  2 14:37 agis_ddmendpoints.agis.ALL.json
[2025-06-02 14:40:49] drwx------. 4 boinc boinc      4096 Jun  2 14:37 pilot3
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc       523 Jun  2 14:38 boinc_task_state.xml
[2025-06-02 14:40:49] -rw-------. 1 boinc boinc       989 Jun  2 14:38 memory_monitor_summary.json
[2025-06-02 14:40:49] -rw-------. 1 boinc boinc     21507 Jun  2 14:38 log.45006595._010649.job.log.tgz.1
[2025-06-02 14:40:49] -rw-------. 1 boinc boinc        95 Jun  2 14:40 pilot_heartbeat.json
[2025-06-02 14:40:49] -rw-------. 1 boinc boinc      8370 Jun  2 14:40 heartbeat.json
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc      8192 Jun  2 14:40 boinc_mmap_file
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc        22 Jun  2 14:40 wrapper_checkpoint.txt
[2025-06-02 14:40:49] -rw-------. 1 boinc boinc      4661 Jun  2 14:40 pilotlog.txt
[2025-06-02 14:40:49] -rw-------. 1 boinc boinc     76376 Jun  2 14:40 log.45006595._010649.job.log.1
[2025-06-02 14:40:49] -rw-------. 1 boinc boinc       188 Jun  2 14:40 output.list
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc       620 Jun  2 14:40 runtime_log
[2025-06-02 14:40:49] -rw-------. 1 boinc boinc    122880 Jun  2 14:40 result.tar.gz
[2025-06-02 14:40:49] -rw-------. 1 boinc boinc       645 Jun  2 14:40 vDeKDmAeQg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVVgKDm3cswon.diag
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc      8484 Jun  2 14:40 runtime_log.err
[2025-06-02 14:40:49] -rw-r--r--. 1 boinc boinc     21651 Jun  2 14:40 stderr.txt
[2025-06-02 14:40:49] No HITS result produced
[2025-06-02 14:40:49]  *** Contents of shared directory: ***
[2025-06-02 14:40:49] total 209712
[2025-06-02 14:40:49] -rw-r--r--. 2 boinc boinc 214086634 Jun  2 14:36 ATLAS.root_0
[2025-06-02 14:40:49] -rw-r--r--. 2 boinc boinc     15093 Jun  2 14:36 start_atlas.sh
[2025-06-02 14:40:49] -rw-r--r--. 2 boinc boinc    508880 Jun  2 14:36 input.tar.gz
[2025-06-02 14:40:49] -rw-------. 1 boinc boinc    122880 Jun  2 14:40 result.tar.gz
14:40:50 (413464): run_atlas exited; CPU time 23.239264
14:40:50 (413464): called boinc_finish(0)

</stderr_txt>
]]>

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