Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:29:06 (22481): wrapper (7.7.26015): starting
07:29:06 (22481): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:29:06] Arguments: --nthreads 8
[2025-06-03 07:29:06] Threads: 8
[2025-06-03 07:29:06] Checking for CVMFS
[2025-06-03 07:29:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:29:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:29:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:29:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:29:07] 2.11.2.0 555 31461 100132 146729 3 210 24061293 25165824 4096 130560 0 16465327 99.818 19332445 2696 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 07:29:07] CVMFS is ok
[2025-06-03 07:29:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:29:07] Checking for apptainer binary...
[2025-06-03 07:29:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:29:07] Running /usr/bin/apptainer --version
[2025-06-03 07:29:07] apptainer version 1.3.2-1.el7
[2025-06-03 07:29:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:29:08] cg-vwn340.simple-grid.lan
[2025-06-03 07:29:08] apptainer works
[2025-06-03 07:29:08] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:29:08] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:29:08] Starting ATLAS job with PandaID=6677392573
[2025-06-03 07:29:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:04:01]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:04:01] 2025-06-03 09:03:45,479 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6677392573/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:04:01] 2025-06-03 09:03:45,479 | INFO     | extracted standard info from prmon json
[2025-06-03 11:04:01] 2025-06-03 09:03:45,479 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:04:01] 2025-06-03 09:03:45,479 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:04:01] 2025-06-03 09:03:45,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:04:01] 2025-06-03 09:03:45,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:04:01] 2025-06-03 09:03:45,484 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:04:01] 2025-06-03 09:03:45,485 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,486 | INFO     | sum of deviations: -37908716509.0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,487 | INFO     | mean x: 1748934974.0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,487 | INFO     | mean y: 2514369.789473684
[2025-06-03 11:04:01] 2025-06-03 09:03:45,487 | INFO     | -- intersect: 23423512713.31828
[2025-06-03 11:04:01] 2025-06-03 09:03:45,487 | INFO     | intersect: 23423512713.31828
[2025-06-03 11:04:01] 2025-06-03 09:03:45,487 | INFO     | chi2: 2.5868384842960213
[2025-06-03 11:04:01] 2025-06-03 09:03:45,489 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,491 | INFO     | sum of deviations: -23011520135.0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,491 | INFO     | mean x: 1748934821.5
[2025-06-03 11:04:01] 2025-06-03 09:03:45,491 | INFO     | mean y: 2525620.470588235
[2025-06-03 11:04:01] 2025-06-03 09:03:45,491 | INFO     | -- intersect: 15290869521.52473
[2025-06-03 11:04:01] 2025-06-03 09:03:45,491 | INFO     | intersect: 15290869521.52473
[2025-06-03 11:04:01] 2025-06-03 09:03:45,492 | INFO     | chi2: 1.822783170385681
[2025-06-03 11:04:01] 2025-06-03 09:03:45,492 | INFO     | current chi2=1.822783170385681 (change=29.53625897205056 %)
[2025-06-03 11:04:01] 2025-06-03 09:03:45,492 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,494 | INFO     | sum of deviations: -21921448305.000004
[2025-06-03 11:04:01] 2025-06-03 09:03:45,494 | INFO     | mean x: 1748934669.0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,494 | INFO     | mean y: 2526500.8492462314
[2025-06-03 11:04:01] 2025-06-03 09:03:45,494 | INFO     | -- intersect: 15692280858.176504
[2025-06-03 11:04:01] 2025-06-03 09:03:45,494 | INFO     | intersect: 15692280858.176504
[2025-06-03 11:04:01] 2025-06-03 09:03:45,494 | INFO     | chi2: 1.821288885224788
[2025-06-03 11:04:01] 2025-06-03 09:03:45,494 | INFO     | current chi2=1.821288885224788 (change=0.08197821798940742 %)
[2025-06-03 11:04:01] 2025-06-03 09:03:45,495 | INFO     | right removable region: 198
[2025-06-03 11:04:01] 2025-06-03 09:03:45,495 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,496 | INFO     | sum of deviations: -72200088244.0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,497 | INFO     | mean x: 1748935126.5
[2025-06-03 11:04:01] 2025-06-03 09:03:45,497 | INFO     | mean y: 2540479.3529411764
[2025-06-03 11:04:01] 2025-06-03 09:03:45,497 | INFO     | -- intersect: 47970687076.458
[2025-06-03 11:04:01] 2025-06-03 09:03:45,497 | INFO     | intersect: 47970687076.458
[2025-06-03 11:04:01] 2025-06-03 09:03:45,497 | INFO     | chi2: 1.0049191828303072
[2025-06-03 11:04:01] 2025-06-03 09:03:45,497 | INFO     | current chi2=1.0049191828303072 (change=61.15261200376858 %)
[2025-06-03 11:04:01] 2025-06-03 09:03:45,498 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,499 | INFO     | sum of deviations: -69093062760.0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,499 | INFO     | mean x: 1748935279.0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,499 | INFO     | mean y: 2537939.135678392
[2025-06-03 11:04:01] 2025-06-03 09:03:45,500 | INFO     | -- intersect: 49454268751.678566
[2025-06-03 11:04:01] 2025-06-03 09:03:45,500 | INFO     | intersect: 49454268751.678566
[2025-06-03 11:04:01] 2025-06-03 09:03:45,500 | INFO     | chi2: 0.9947665943865284
[2025-06-03 11:04:01] 2025-06-03 09:03:45,500 | INFO     | current chi2=0.9947665943865284 (change=1.010289047840104 %)
[2025-06-03 11:04:01] 2025-06-03 09:03:45,500 | INFO     | left removable region: 20
[2025-06-03 11:04:01] 2025-06-03 09:03:45,501 | INFO     | sum of square deviations: 1748737904.5
[2025-06-03 11:04:01] 2025-06-03 09:03:45,502 | INFO     | sum of deviations: -41339263788.99999
[2025-06-03 11:04:01] 2025-06-03 09:03:45,502 | INFO     | mean x: 1748935248.5
[2025-06-03 11:04:01] 2025-06-03 09:03:45,502 | INFO     | mean y: 2541764.6516853934
[2025-06-03 11:04:01] 2025-06-03 09:03:45,502 | INFO     | -- intersect: 41346470664.21638
[2025-06-03 11:04:01] 2025-06-03 09:03:45,502 | INFO     | intersect: 41346470664.21638
[2025-06-03 11:04:01] 2025-06-03 09:03:45,503 | INFO     | chi2: 0.19134853317235956
[2025-06-03 11:04:01] 2025-06-03 09:03:45,503 | INFO     | -- intersect: 41346470664.21638
[2025-06-03 11:04:01] 2025-06-03 09:03:45,503 | INFO     | current memory leak: -23.64 B/s (using 178 data points, chi2=0.19)
[2025-06-03 11:04:01] 2025-06-03 09:03:45,504 | INFO     | ..............................
[2025-06-03 11:04:01] 2025-06-03 09:03:45,504 | INFO     | . Timing measurements:
[2025-06-03 11:04:01] 2025-06-03 09:03:45,504 | INFO     | . get job = 0 s
[2025-06-03 11:04:01] 2025-06-03 09:03:45,504 | INFO     | . initial setup = 2 s
[2025-06-03 11:04:01] 2025-06-03 09:03:45,504 | INFO     | . payload setup = 11 s
[2025-06-03 11:04:01] 2025-06-03 09:03:45,504 | INFO     | . stage-in = 0 s
[2025-06-03 11:04:01] 2025-06-03 09:03:45,504 | INFO     | . payload execution = 12713 s
[2025-06-03 11:04:01] 2025-06-03 09:03:45,504 | INFO     | . stage-out = 11 s
[2025-06-03 11:04:01] 2025-06-03 09:03:45,504 | INFO     | . log creation = 1 s
[2025-06-03 11:04:01] 2025-06-03 09:03:45,505 | INFO     | ..............................
[2025-06-03 11:04:01] 2025-06-03 09:03:45,621 | INFO     | 
[2025-06-03 11:04:01] 2025-06-03 09:03:45,621 | INFO     | job summary report
[2025-06-03 11:04:01] 2025-06-03 09:03:45,621 | INFO     | --------------------------------------------------
[2025-06-03 11:04:01] 2025-06-03 09:03:45,621 | INFO     | PanDA job id: 6677392573
[2025-06-03 11:04:01] 2025-06-03 09:03:45,621 | INFO     | task id: 45006595
[2025-06-03 11:04:01] 2025-06-03 09:03:45,621 | INFO     | errors: (none)
[2025-06-03 11:04:01] 2025-06-03 09:03:45,621 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:04:01] 2025-06-03 09:03:45,621 | INFO     | pilot state: finished 
[2025-06-03 11:04:01] 2025-06-03 09:03:45,622 | INFO     | transexitcode: 0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,622 | INFO     | exeerrorcode: 0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,622 | INFO     | exeerrordiag: 
[2025-06-03 11:04:01] 2025-06-03 09:03:45,622 | INFO     | exitcode: 0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,622 | INFO     | exitmsg: OK
[2025-06-03 11:04:01] 2025-06-03 09:03:45,622 | INFO     | cpuconsumptiontime: 48509 s
[2025-06-03 11:04:01] 2025-06-03 09:03:45,622 | INFO     | nevents: 400
[2025-06-03 11:04:01] 2025-06-03 09:03:45,622 | INFO     | neventsw: 0
[2025-06-03 11:04:01] 2025-06-03 09:03:45,622 | INFO     | pid: 3445
[2025-06-03 11:04:01] 2025-06-03 09:03:45,622 | INFO     | pgrp: 3445
[2025-06-03 11:04:01] 2025-06-03 09:03:45,622 | INFO     | corecount: 8
[2025-06-03 11:04:01] 2025-06-03 09:03:45,622 | INFO     | event service: False
[2025-06-03 11:04:01] 2025-06-03 09:03:45,623 | INFO     | sizes: {0: 2405007, 1: 2405206, 12: 2405206, 14: 2405440, 23: 2405468, 12729: 2434712, 12740: 2443655, 12742: 2443711, 12826: 2443881}
[2025-06-03 11:04:01] 2025-06-03 09:03:45,623 | INFO     | --------------------------------------------------
[2025-06-03 11:04:01] 2025-06-03 09:03:45,623 | INFO     | 
[2025-06-03 11:04:01] 2025-06-03 09:03:45,623 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 11:04:01] 2025-06-03 09:03:45,846 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,846 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,846 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,846 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,847 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,847 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,847 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,847 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,847 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,847 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,847 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,847 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,847 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,847 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,847 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,847 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,848 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:04:01] 2025-06-03 09:03:45,848 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,848 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:04:01] 2025-06-03 09:03:45,848 | INFO     | job 6677392573 has completed (purged errors)
[2025-06-03 11:04:01] 2025-06-03 09:03:45,848 | INFO     | overall cleanup function is called
[2025-06-03 11:04:01] 2025-06-03 09:03:46,861 | INFO     | --- collectZombieJob: --- 10, [3445]
[2025-06-03 11:04:01] 2025-06-03 09:03:46,861 | INFO     | zombie collector waiting for pid 3445
[2025-06-03 11:04:01] 2025-06-03 09:03:46,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:04:01] 2025-06-03 09:03:46,861 | INFO     | collected zombie processes
[2025-06-03 11:04:01] 2025-06-03 09:03:46,861 | INFO     | will attempt to kill all subprocesses of pid=3445
[2025-06-03 11:04:01] 2025-06-03 09:03:46,997 | INFO     | process IDs to be killed: [3445] (in reverse order)
[2025-06-03 11:04:01] 2025-06-03 09:03:47,791 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:04:01] 2025-06-03 09:03:47,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:04:01] 2025-06-03 09:03:47,795 | INFO     | did not find any defunct processes belonging to 3445
[2025-06-03 11:04:01] 2025-06-03 09:03:47,798 | INFO     | did not find any defunct processes belonging to 3445
[2025-06-03 11:04:01] 2025-06-03 09:03:47,798 | INFO     | ready for new job
[2025-06-03 11:04:01] 2025-06-03 09:03:47,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:04:01] 2025-06-03 09:03:47,800 | INFO     | **************************************
[2025-06-03 11:04:01] 2025-06-03 09:03:47,801 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:04:01] 2025-06-03 09:03:47,801 | INFO     | **************************************
[2025-06-03 11:04:01] 2025-06-03 09:03:47,801 | INFO     | 
[2025-06-03 11:04:01] 2025-06-03 09:03:47,802 | INFO     | pilot is running in a VM
[2025-06-03 11:04:01] 2025-06-03 09:03:47,802 | INFO     | architecture information:
[2025-06-03 11:04:01] 2025-06-03 09:03:47,806 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:04:01] 2025-06-03 09:03:47,843 | INFO     | cat /etc/os-release:
[2025-06-03 11:04:01] NAME="CentOS Linux"
[2025-06-03 11:04:01] VERSION="7 (Core)"
[2025-06-03 11:04:01] ID="centos"
[2025-06-03 11:04:01] ID_LIKE="rhel fedora"
[2025-06-03 11:04:01] VERSION_ID="7"
[2025-06-03 11:04:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:04:01] ANSI_COLOR="0;31"
[2025-06-03 11:04:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:04:01] HOME_URL="https://www.centos.org/"
[2025-06-03 11:04:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:04:01] 
[2025-06-03 11:04:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:04:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:04:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:04:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:04:01] 
[2025-06-03 11:04:01] 2025-06-03 09:03:47,844 | INFO     | **************************************
[2025-06-03 11:04:01] 2025-06-03 09:03:48,347 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 11:04:01] 2025-06-03 09:03:48,428 | INFO     | sufficient remaining disk space (496729325568 B)
[2025-06-03 11:04:01] 2025-06-03 09:03:48,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:04:01] 2025-06-03 09:03:48,428 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:04:01] 2025-06-03 09:03:48,428 | INFO     | update_server=False
[2025-06-03 11:04:01] 2025-06-03 09:03:48,428 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:04:01] 2025-06-03 09:03:48,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:04:01] 2025-06-03 09:03:48,429 | INFO     | aborting loop
[2025-06-03 11:04:01] 2025-06-03 09:03:48,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:04:01] 2025-06-03 09:03:48,476 | INFO     | all job control threads have been joined
[2025-06-03 11:04:01] 2025-06-03 09:03:48,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:04:01] 2025-06-03 09:03:48,860 | INFO     | all payload control threads have been joined
[2025-06-03 11:04:01] 2025-06-03 09:03:48,984 | INFO     | all data control threads have been joined
[2025-06-03 11:04:01] 2025-06-03 09:03:49,362 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:04:01] 2025-06-03 09:03:49,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:04:01] 2025-06-03 09:03:49,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:04:01] 2025-06-03 09:03:49,434 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:49,438 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:49,440 | INFO     | [job] validate thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:49,482 | INFO     | [job] control thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:49,807 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:49,862 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:49,866 | INFO     | [payload] control thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:49,871 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:49,990 | INFO     | [data] control thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:50,115 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:50,240 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:50,444 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:50,536 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:50,626 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:50,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:04:01] 2025-06-03 09:03:51,640 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:52,518 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:04:01] 2025-06-03 09:03:53,718 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140676240459584)>', '<ExcThread(monitor, started 140675781736192)>']
[2025-06-03 11:04:01] 2025-06-03 09:03:54,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:04:01] 2025-06-03 09:03:54,392 | INFO     | [monitor] control thread has ended
[2025-06-03 11:04:01] 2025-06-03 09:03:58,744 | INFO     | all workflow threads have been joined
[2025-06-03 11:04:01] 2025-06-03 09:03:58,744 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:04:01] 2025-06-03 09:03:58,744 | INFO     | traces error code: 0
[2025-06-03 11:04:01] 2025-06-03 09:03:58,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:04:01] 2025-06-03 09:03:59,027 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:04:01] 2025-06-03 09:03:59,117 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:04:01] 2025-06-03 09:03:59,164 [wrapper] pilotpid: 26178
[2025-06-03 11:04:01] 2025-06-03 09:03:59,223 [wrapper] Pilot exit status: 0
[2025-06-03 11:04:01] 2025-06-03 09:03:59,555 [wrapper] pandaids: 6677392573
[2025-06-03 11:04:01] 2025-06-03 09:03:59,775 [wrapper] cleanup supervisor_pilot 22357 26179
[2025-06-03 11:04:01] 2025-06-03 09:03:59,821 [wrapper] Test setup, not cleaning
[2025-06-03 11:04:01] 2025-06-03 09:03:59,845 [wrapper] apfmon messages muted
[2025-06-03 11:04:01] 2025-06-03 09:03:59,867 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:04:01] 2025-06-03 09:03:59,878 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:04:01]  *** Error codes and diagnostics ***
[2025-06-03 11:04:01]     "exeErrorCode": 0,
[2025-06-03 11:04:01]     "exeErrorDiag": "",
[2025-06-03 11:04:01]     "pilotErrorCode": 0,
[2025-06-03 11:04:01]     "pilotErrorDiag": "",
[2025-06-03 11:04:01]  *** Listing of results directory ***
[2025-06-03 11:04:01] total 387344
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:45 queuedata.json
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:47 pilot3.tar.gz
[2025-06-03 11:04:01] -rwx------. 1 boinc boinc     37140 Jun  2 20:47 runpilot2-wrapper.sh
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc       100 Jun  3 07:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:04:01] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 07:29 run_atlas
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc       105 Jun  3 07:29 job.xml
[2025-06-03 11:04:01] -rw-r--r--. 2 boinc boinc 213432789 Jun  3 07:29 EVNT.45006593._000321.pool.root.1
[2025-06-03 11:04:01] -rw-r--r--. 2 boinc boinc    508878 Jun  3 07:29 input.tar.gz
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc      6391 Jun  3 07:29 init_data.xml
[2025-06-03 11:04:01] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:29 start_atlas.sh
[2025-06-03 11:04:01] drwxrwx--x. 2 boinc boinc        68 Jun  3 07:29 shared
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc         0 Jun  3 07:29 boinc_lockfile
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc      2521 Jun  3 07:29 pandaJob.out
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc    988073 Jun  3 07:29 agis_schedconf.cvmfs.json
[2025-06-03 11:04:01] drwx------. 4 boinc boinc      4096 Jun  3 07:29 pilot3
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc 176396721 Jun  3 11:00 HITS.45006595._008021.pool.root.1
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc       531 Jun  3 11:01 boinc_task_state.xml
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc      1017 Jun  3 11:02 memory_monitor_summary.json
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc   1603667 Jun  3 11:02 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc    382494 Jun  3 11:02 log.45006595._008021.job.log.tgz.1
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc        95 Jun  3 11:03 pilot_heartbeat.json
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc      7689 Jun  3 11:03 heartbeat.json
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc      8192 Jun  3 11:03 boinc_mmap_file
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc        28 Jun  3 11:03 wrapper_checkpoint.txt
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc      4417 Jun  3 11:03 pilotlog.txt
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc   1113966 Jun  3 11:03 log.45006595._008021.job.log.1
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc       357 Jun  3 11:04 output.list
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc       620 Jun  3 11:04 runtime_log
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc   1515520 Jun  3 11:04 result.tar.gz
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc       656 Jun  3 11:04 VgjKDmTNPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDma5fKDm120aXo.diag
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc      8673 Jun  3 11:04 runtime_log.err
[2025-06-03 11:04:01] -rw-r--r--. 1 boinc boinc     20235 Jun  3 11:04 stderr.txt
[2025-06-03 11:04:01] HITS file was successfully produced:
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc 176396721 Jun  3 11:00 shared/HITS.pool.root.1
[2025-06-03 11:04:01]  *** Contents of shared directory: ***
[2025-06-03 11:04:01] total 382692
[2025-06-03 11:04:01] -rw-r--r--. 2 boinc boinc 213432789 Jun  3 07:29 ATLAS.root_0
[2025-06-03 11:04:01] -rw-r--r--. 2 boinc boinc    508878 Jun  3 07:29 input.tar.gz
[2025-06-03 11:04:01] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:29 start_atlas.sh
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc 176396721 Jun  3 11:00 HITS.pool.root.1
[2025-06-03 11:04:01] -rw-------. 1 boinc boinc   1515520 Jun  3 11:04 result.tar.gz
11:04:03 (22481): run_atlas exited; CPU time 48672.144492
11:04:03 (22481): called boinc_finish(0)

</stderr_txt>
]]>

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