Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:34:06 (11229): wrapper (7.7.26015): starting
06:34:06 (11229): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:34:06] Arguments: --nthreads 8
[2025-06-03 06:34:06] Threads: 8
[2025-06-03 06:34:06] Checking for CVMFS
[2025-06-03 06:34:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:34:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:34:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:34:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:34:08] 2.11.2.0 22417 31282 90284 146729 3 200 21737551 25165824 4593 130560 0 15700090 99.772 18240390 2169 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 06:34:08] CVMFS is ok
[2025-06-03 06:34:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:34:08] Checking for apptainer binary...
[2025-06-03 06:34:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:34:08] Running /usr/bin/apptainer --version
[2025-06-03 06:34:08] apptainer version 1.3.2-1.el7
[2025-06-03 06:34:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:34:13] cg-vwn254.simple-grid.lan
[2025-06-03 06:34:13] apptainer works
[2025-06-03 06:34:13] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:34:13] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:34:13] Starting ATLAS job with PandaID=6677392531
[2025-06-03 06:34:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:40:57]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:40:57] 2025-06-03 08:27:16,917 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6677392531/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 10:40:57] 2025-06-03 08:27:16,918 | INFO     | extracted standard info from prmon json
[2025-06-03 10:40:57] 2025-06-03 08:27:16,918 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 10:40:57] 2025-06-03 08:27:16,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:40:57] 2025-06-03 08:27:16,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:40:57] 2025-06-03 08:27:16,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:40:57] 2025-06-03 08:27:16,923 | INFO     | fitting pss+swap vs Time
[2025-06-03 10:40:57] 2025-06-03 08:27:16,924 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 10:40:57] 2025-06-03 08:27:16,926 | INFO     | sum of deviations: 33038876119.99993
[2025-06-03 10:40:57] 2025-06-03 08:27:16,926 | INFO     | mean x: 1748932540.0
[2025-06-03 10:40:57] 2025-06-03 08:27:16,926 | INFO     | mean y: 2504383.34562212
[2025-06-03 10:40:57] 2025-06-03 08:27:16,926 | INFO     | -- intersect: -18234349611.013138
[2025-06-03 10:40:57] 2025-06-03 08:27:16,926 | INFO     | intersect: -18234349611.013138
[2025-06-03 10:40:57] 2025-06-03 08:27:16,927 | INFO     | chi2: 7.905770272363146
[2025-06-03 10:40:57] 2025-06-03 08:27:16,927 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 10:40:57] 2025-06-03 08:27:16,929 | INFO     | sum of deviations: 48062536504.500015
[2025-06-03 10:40:57] 2025-06-03 08:27:16,929 | INFO     | mean x: 1748932387.5
[2025-06-03 10:40:57] 2025-06-03 08:27:16,929 | INFO     | mean y: 2514898.853773585
[2025-06-03 10:40:57] 2025-06-03 08:27:16,929 | INFO     | -- intersect: -28448866900.8381
[2025-06-03 10:40:57] 2025-06-03 08:27:16,929 | INFO     | intersect: -28448866900.8381
[2025-06-03 10:40:57] 2025-06-03 08:27:16,929 | INFO     | chi2: 7.210066345895155
[2025-06-03 10:40:57] 2025-06-03 08:27:16,929 | INFO     | current chi2=7.210066345895155 (change=8.799951206525957 %)
[2025-06-03 10:40:57] 2025-06-03 08:27:16,930 | INFO     | right removable region: 211
[2025-06-03 10:40:57] 2025-06-03 08:27:16,930 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 10:40:57] 2025-06-03 08:27:16,932 | INFO     | sum of deviations: -42539336278.5
[2025-06-03 10:40:57] 2025-06-03 08:27:16,932 | INFO     | mean x: 1748932692.5
[2025-06-03 10:40:57] 2025-06-03 08:27:16,932 | INFO     | mean y: 2558191.2594339624
[2025-06-03 10:40:57] 2025-06-03 08:27:16,932 | INFO     | -- intersect: 25184398290.752274
[2025-06-03 10:40:57] 2025-06-03 08:27:16,932 | INFO     | intersect: 25184398290.752274
[2025-06-03 10:40:57] 2025-06-03 08:27:16,932 | INFO     | chi2: 3.0581732574284026
[2025-06-03 10:40:57] 2025-06-03 08:27:16,933 | INFO     | current chi2=3.0581732574284026 (change=61.31720057539351 %)
[2025-06-03 10:40:57] 2025-06-03 08:27:16,933 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 10:40:57] 2025-06-03 08:27:16,934 | INFO     | sum of deviations: -89520396219.00002
[2025-06-03 10:40:57] 2025-06-03 08:27:16,935 | INFO     | mean x: 1748932845.0
[2025-06-03 10:40:57] 2025-06-03 08:27:16,935 | INFO     | mean y: 2593139.072463768
[2025-06-03 10:40:57] 2025-06-03 08:27:16,935 | INFO     | -- intersect: 56929266405.009766
[2025-06-03 10:40:57] 2025-06-03 08:27:16,935 | INFO     | intersect: 56929266405.009766
[2025-06-03 10:40:57] 2025-06-03 08:27:16,935 | INFO     | chi2: 1.0516869794543273
[2025-06-03 10:40:57] 2025-06-03 08:27:16,935 | INFO     | current chi2=1.0516869794543273 (change=65.61061486952235 %)
[2025-06-03 10:40:57] 2025-06-03 08:27:16,936 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 10:40:57] 2025-06-03 08:27:16,937 | INFO     | sum of deviations: -93284591844.0
[2025-06-03 10:40:57] 2025-06-03 08:27:16,937 | INFO     | mean x: 1748932997.5
[2025-06-03 10:40:57] 2025-06-03 08:27:16,937 | INFO     | mean y: 2596026.920792079
[2025-06-03 10:40:57] 2025-06-03 08:27:16,937 | INFO     | -- intersect: 63837939379.131485
[2025-06-03 10:40:57] 2025-06-03 08:27:16,938 | INFO     | intersect: 63837939379.131485
[2025-06-03 10:40:57] 2025-06-03 08:27:16,938 | INFO     | chi2: 0.9642230801681592
[2025-06-03 10:40:57] 2025-06-03 08:27:16,938 | INFO     | current chi2=0.9642230801681592 (change=8.316533435789916 %)
[2025-06-03 10:40:57] 2025-06-03 08:27:16,938 | INFO     | left removable region: 30
[2025-06-03 10:40:57] 2025-06-03 08:27:16,938 | INFO     | sum of square deviations: 1838657730.0
[2025-06-03 10:40:57] 2025-06-03 08:27:16,940 | INFO     | sum of deviations: -64083948878.99998
[2025-06-03 10:40:57] 2025-06-03 08:27:16,940 | INFO     | mean x: 1748933272.0
[2025-06-03 10:40:57] 2025-06-03 08:27:16,940 | INFO     | mean y: 2599357.0607734807
[2025-06-03 10:40:57] 2025-06-03 08:27:16,940 | INFO     | -- intersect: 60959322605.18275
[2025-06-03 10:40:57] 2025-06-03 08:27:16,940 | INFO     | intersect: 60959322605.18275
[2025-06-03 10:40:57] 2025-06-03 08:27:16,940 | INFO     | chi2: 0.1665378923024907
[2025-06-03 10:40:57] 2025-06-03 08:27:16,941 | INFO     | -- intersect: 60959322605.18275
[2025-06-03 10:40:57] 2025-06-03 08:27:16,941 | INFO     | current memory leak: -34.85 B/s (using 181 data points, chi2=0.17)
[2025-06-03 10:40:57] 2025-06-03 08:27:16,942 | INFO     | ..............................
[2025-06-03 10:40:57] 2025-06-03 08:27:16,942 | INFO     | . Timing measurements:
[2025-06-03 10:40:57] 2025-06-03 08:27:16,942 | INFO     | . get job = 0 s
[2025-06-03 10:40:57] 2025-06-03 08:27:16,942 | INFO     | . initial setup = 7 s
[2025-06-03 10:40:57] 2025-06-03 08:27:16,942 | INFO     | . payload setup = 162 s
[2025-06-03 10:40:57] 2025-06-03 08:27:16,942 | INFO     | . stage-in = 0 s
[2025-06-03 10:40:57] 2025-06-03 08:27:16,942 | INFO     | . payload execution = 13351 s
[2025-06-03 10:40:57] 2025-06-03 08:27:16,942 | INFO     | . stage-out = 3 s
[2025-06-03 10:40:57] 2025-06-03 08:27:16,942 | INFO     | . log creation = 1 s
[2025-06-03 10:40:57] 2025-06-03 08:27:16,942 | INFO     | ..............................
[2025-06-03 10:40:57] 2025-06-03 08:27:17,533 | INFO     | 
[2025-06-03 10:40:57] 2025-06-03 08:27:17,533 | INFO     | job summary report
[2025-06-03 10:40:57] 2025-06-03 08:27:17,533 | INFO     | --------------------------------------------------
[2025-06-03 10:40:57] 2025-06-03 08:27:17,533 | INFO     | PanDA job id: 6677392531
[2025-06-03 10:40:57] 2025-06-03 08:27:17,533 | INFO     | task id: 45006595
[2025-06-03 10:40:57] 2025-06-03 08:27:17,533 | INFO     | errors: (none)
[2025-06-03 10:40:57] 2025-06-03 08:27:17,533 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:40:57] 2025-06-03 08:27:17,534 | INFO     | pilot state: finished 
[2025-06-03 10:40:57] 2025-06-03 08:27:17,534 | INFO     | transexitcode: 0
[2025-06-03 10:40:57] 2025-06-03 08:27:17,534 | INFO     | exeerrorcode: 0
[2025-06-03 10:40:57] 2025-06-03 08:27:17,534 | INFO     | exeerrordiag: 
[2025-06-03 10:40:57] 2025-06-03 08:27:17,534 | INFO     | exitcode: 0
[2025-06-03 10:40:57] 2025-06-03 08:27:17,534 | INFO     | exitmsg: OK
[2025-06-03 10:40:57] 2025-06-03 08:27:17,534 | INFO     | cpuconsumptiontime: 49243 s
[2025-06-03 10:40:57] 2025-06-03 08:27:17,534 | INFO     | nevents: 400
[2025-06-03 10:40:57] 2025-06-03 08:27:17,534 | INFO     | neventsw: 0
[2025-06-03 10:40:57] 2025-06-03 08:27:17,534 | INFO     | pid: 27201
[2025-06-03 10:40:57] 2025-06-03 08:27:17,534 | INFO     | pgrp: 27201
[2025-06-03 10:40:57] 2025-06-03 08:27:17,534 | INFO     | corecount: 8
[2025-06-03 10:40:57] 2025-06-03 08:27:17,535 | INFO     | event service: False
[2025-06-03 10:40:57] 2025-06-03 08:27:17,535 | INFO     | sizes: {0: 2405004, 1: 2405203, 12: 2405203, 23: 2405231, 34: 2405259, 44: 2405287, 55: 2405443, 66: 2405471, 77: 2405499, 84: 2405761, 87: 2405789, 13517: 2435624
[2025-06-03 10:40:57] 2025-06-03 08:27:17,535 | INFO     | --------------------------------------------------
[2025-06-03 10:40:57] 2025-06-03 08:27:17,535 | INFO     | 
[2025-06-03 10:40:57] 2025-06-03 08:27:17,535 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-03 10:40:57] 2025-06-03 08:27:17,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,738 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,738 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,738 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,739 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:40:57] 2025-06-03 08:27:17,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:40:57] 2025-06-03 08:27:17,740 | INFO     | job 6677392531 has completed (purged errors)
[2025-06-03 10:40:57] 2025-06-03 08:27:17,740 | INFO     | overall cleanup function is called
[2025-06-03 10:40:57] 2025-06-03 08:27:18,749 | INFO     | --- collectZombieJob: --- 10, [27201]
[2025-06-03 10:40:57] 2025-06-03 08:27:18,749 | INFO     | zombie collector waiting for pid 27201
[2025-06-03 10:40:57] 2025-06-03 08:27:18,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:40:57] 2025-06-03 08:27:18,749 | INFO     | collected zombie processes
[2025-06-03 10:40:57] 2025-06-03 08:27:18,749 | INFO     | will attempt to kill all subprocesses of pid=27201
[2025-06-03 10:40:57] 2025-06-03 08:27:18,852 | INFO     | process IDs to be killed: [27201] (in reverse order)
[2025-06-03 10:40:57] 2025-06-03 08:27:19,503 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:40:57] 2025-06-03 08:27:19,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:40:57] 2025-06-03 08:27:19,507 | INFO     | did not find any defunct processes belonging to 27201
[2025-06-03 10:40:57] 2025-06-03 08:27:19,510 | INFO     | did not find any defunct processes belonging to 27201
[2025-06-03 10:40:57] 2025-06-03 08:27:19,510 | INFO     | ready for new job
[2025-06-03 10:40:57] 2025-06-03 08:27:19,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:40:57] 2025-06-03 08:27:19,512 | INFO     | **************************************
[2025-06-03 10:40:57] 2025-06-03 08:27:19,516 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:40:57] 2025-06-03 08:27:19,516 | INFO     | **************************************
[2025-06-03 10:40:57] 2025-06-03 08:27:19,516 | INFO     | 
[2025-06-03 10:40:57] 2025-06-03 08:27:19,517 | INFO     | pilot is running in a VM
[2025-06-03 10:40:57] 2025-06-03 08:27:19,517 | INFO     | architecture information:
[2025-06-03 10:40:57] 2025-06-03 08:27:19,533 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:40:57] 2025-06-03 08:27:19,803 | INFO     | cat /etc/os-release:
[2025-06-03 10:40:57] NAME="CentOS Linux"
[2025-06-03 10:40:57] VERSION="7 (Core)"
[2025-06-03 10:40:57] ID="centos"
[2025-06-03 10:40:57] ID_LIKE="rhel fedora"
[2025-06-03 10:40:57] VERSION_ID="7"
[2025-06-03 10:40:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:40:57] ANSI_COLOR="0;31"
[2025-06-03 10:40:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:40:57] HOME_URL="https://www.centos.org/"
[2025-06-03 10:40:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:40:57] 
[2025-06-03 10:40:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:40:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:40:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:40:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:40:57] 
[2025-06-03 10:40:57] 2025-06-03 08:27:19,804 | INFO     | **************************************
[2025-06-03 10:40:57] 2025-06-03 08:27:20,308 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-03 10:40:57] 2025-06-03 08:27:20,574 | INFO     | sufficient remaining disk space (496491298816 B)
[2025-06-03 10:40:57] 2025-06-03 08:27:20,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:40:57] 2025-06-03 08:27:20,575 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:40:57] 2025-06-03 08:27:20,575 | INFO     | update_server=False
[2025-06-03 10:40:57] 2025-06-03 08:27:20,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:40:57] 2025-06-03 08:27:20,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:40:57] 2025-06-03 08:27:20,576 | INFO     | aborting loop
[2025-06-03 10:40:57] 2025-06-03 08:27:20,582 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:40:57] 2025-06-03 08:27:20,630 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:40:57] 2025-06-03 08:27:20,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:40:57] 2025-06-03 08:27:20,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:40:57] 2025-06-03 08:27:20,649 | INFO     | all payload control threads have been joined
[2025-06-03 10:40:57] 2025-06-03 08:27:21,129 | INFO     | all data control threads have been joined
[2025-06-03 10:40:57] 2025-06-03 08:27:21,405 | INFO     | all job control threads have been joined
[2025-06-03 10:40:57] 2025-06-03 08:27:21,581 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:21,582 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:21,655 | INFO     | [payload] control thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:21,669 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:21,848 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:22,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:40:57] 2025-06-03 08:27:22,135 | INFO     | [data] control thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:22,141 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:22,185 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:22,268 | INFO     | [job] validate thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:22,411 | INFO     | [job] control thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:22,555 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:22,589 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:22,793 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:23,082 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:23,115 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:23,855 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:40:57] 2025-06-03 08:27:27,864 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:40:57] 2025-06-03 08:27:28,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140169570490176)>', '<ExcThread(monitor, started 140169000773376)>']
[2025-06-03 10:40:57] 2025-06-03 08:27:29,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:40:57] 2025-06-03 08:27:29,685 | INFO     | [monitor] control thread has ended
[2025-06-03 10:40:57] 2025-06-03 08:27:33,709 | INFO     | all workflow threads have been joined
[2025-06-03 10:40:57] 2025-06-03 08:27:33,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:40:57] 2025-06-03 08:27:33,709 | INFO     | traces error code: 0
[2025-06-03 10:40:57] 2025-06-03 08:27:33,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:40:57] 2025-06-03 08:27:34,160 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:40:57] 2025-06-03 08:27:34,243 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:40:57] 2025-06-03 08:27:34,350 [wrapper] pilotpid: 18551
[2025-06-03 10:40:57] 2025-06-03 08:27:34,463 [wrapper] Pilot exit status: 0
[2025-06-03 10:40:57] 2025-06-03 08:27:34,856 [wrapper] pandaids: 6677392531
[2025-06-03 10:40:57] 2025-06-03 08:27:35,687 [wrapper] cleanup supervisor_pilot  3061 18553
[2025-06-03 10:40:57] 2025-06-03 08:27:35,766 [wrapper] Test setup, not cleaning
[2025-06-03 10:40:57] 2025-06-03 08:27:35,822 [wrapper] apfmon messages muted
[2025-06-03 10:40:57] 2025-06-03 08:27:35,919 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:40:57] 2025-06-03 08:27:36,018 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:40:57]  *** Error codes and diagnostics ***
[2025-06-03 10:40:57]     "exeErrorCode": 0,
[2025-06-03 10:40:57]     "exeErrorDiag": "",
[2025-06-03 10:40:57]     "pilotErrorCode": 0,
[2025-06-03 10:40:57]     "pilotErrorDiag": "",
[2025-06-03 10:40:57]  *** Listing of results directory ***
[2025-06-03 10:40:57] total 396224
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:45 queuedata.json
[2025-06-03 10:40:57] -rwx------. 1 boinc boinc     37140 Jun  2 20:47 runpilot2-wrapper.sh
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:47 pilot3.tar.gz
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc       100 Jun  3 06:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:40:57] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 06:34 run_atlas
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc       105 Jun  3 06:34 job.xml
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc      6390 Jun  3 06:34 init_data.xml
[2025-06-03 10:40:57] -rw-r--r--. 2 boinc boinc 217654996 Jun  3 06:34 EVNT.45006593._000320.pool.root.1
[2025-06-03 10:40:57] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:34 start_atlas.sh
[2025-06-03 10:40:57] drwxrwx--x. 2 boinc boinc        68 Jun  3 06:34 shared
[2025-06-03 10:40:57] -rw-r--r--. 2 boinc boinc    508870 Jun  3 06:34 input.tar.gz
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc         0 Jun  3 06:34 boinc_lockfile
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc      2520 Jun  3 06:34 pandaJob.out
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc    988073 Jun  3 06:37 agis_schedconf.cvmfs.json
[2025-06-03 10:40:57] drwx------. 4 boinc boinc      4096 Jun  3 06:37 pilot3
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc 181160453 Jun  3 10:24 HITS.45006595._007979.pool.root.1
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc       531 Jun  3 10:24 boinc_task_state.xml
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc      1013 Jun  3 10:25 memory_monitor_summary.json
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc   1603667 Jun  3 10:25 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc    367937 Jun  3 10:25 log.45006595._007979.job.log.tgz.1
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc        95 Jun  3 10:26 pilot_heartbeat.json
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc      7689 Jun  3 10:27 heartbeat.json
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc      4416 Jun  3 10:27 pilotlog.txt
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc   1176455 Jun  3 10:27 log.45006595._007979.job.log.1
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc       357 Jun  3 10:27 output.list
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc       620 Jun  3 10:27 runtime_log
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc   1566720 Jun  3 10:27 result.tar.gz
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc      8659 Jun  3 10:27 runtime_log.err
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc       656 Jun  3 10:27 DGDODmrMPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmd4fKDmwh4Q4n.diag
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc        28 Jun  3 10:40 wrapper_checkpoint.txt
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc      8192 Jun  3 10:40 boinc_mmap_file
[2025-06-03 10:40:57] -rw-r--r--. 1 boinc boinc     20527 Jun  3 10:40 stderr.txt
[2025-06-03 10:40:57] HITS file was successfully produced:
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc 181160453 Jun  3 10:24 shared/HITS.pool.root.1
[2025-06-03 10:40:57]  *** Contents of shared directory: ***
[2025-06-03 10:40:57] total 391520
[2025-06-03 10:40:57] -rw-r--r--. 2 boinc boinc 217654996 Jun  3 06:34 ATLAS.root_0
[2025-06-03 10:40:57] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:34 start_atlas.sh
[2025-06-03 10:40:57] -rw-r--r--. 2 boinc boinc    508870 Jun  3 06:34 input.tar.gz
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc 181160453 Jun  3 10:24 HITS.pool.root.1
[2025-06-03 10:40:57] -rw-------. 1 boinc boinc   1566720 Jun  3 10:27 result.tar.gz
10:40:59 (11229): run_atlas exited; CPU time 49426.469568
10:40:59 (11229): called boinc_finish(0)

</stderr_txt>
]]>

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