Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:02:11 (5033): wrapper (7.7.26015): starting
09:02:11 (5033): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:02:11] Arguments: --nthreads 8
[2025-06-03 09:02:11] Threads: 8
[2025-06-03 09:02:11] Checking for CVMFS
[2025-06-03 09:02:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:02:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:02:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:02:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:02:13] 2.11.2.0 28641 31457 92288 146731 3 16 14480015 25165825 4633 130560 0 16975220 99.836 18414046 1954 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 09:02:13] CVMFS is ok
[2025-06-03 09:02:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:02:13] Checking for apptainer binary...
[2025-06-03 09:02:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:02:13] Running /usr/bin/apptainer --version
[2025-06-03 09:02:13] apptainer version 1.3.2-1.el7
[2025-06-03 09:02:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:02:19] cg-vwn402.simple-grid.lan
[2025-06-03 09:02:19] apptainer works
[2025-06-03 09:02:19] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:02:19] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:02:19] Starting ATLAS job with PandaID=6677392534
[2025-06-03 09:02:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:07:57]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:07:57] 2025-06-03 10:51:32,774 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:07:57] 2025-06-03 10:51:32,779 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:07:57] 2025-06-03 10:51:32,780 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 13:07:57] 2025-06-03 10:51:32,781 | INFO     | sum of deviations: 1385847745.4999962
[2025-06-03 13:07:57] 2025-06-03 10:51:32,782 | INFO     | mean x: 1748941153.5
[2025-06-03 13:07:57] 2025-06-03 10:51:32,782 | INFO     | mean y: 2471803.362385321
[2025-06-03 13:07:57] 2025-06-03 10:51:32,782 | INFO     | -- intersect: -752015525.4377035
[2025-06-03 13:07:57] 2025-06-03 10:51:32,782 | INFO     | intersect: -752015525.4377035
[2025-06-03 13:07:57] 2025-06-03 10:51:32,782 | INFO     | chi2: 2.458270557962414
[2025-06-03 13:07:57] 2025-06-03 10:51:32,783 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,785 | INFO     | sum of deviations: 15567741680.000006
[2025-06-03 13:07:57] 2025-06-03 10:51:32,785 | INFO     | mean x: 1748941001.0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,785 | INFO     | mean y: 2481627.2253521127
[2025-06-03 13:07:57] 2025-06-03 10:51:32,785 | INFO     | -- intersect: -9083944792.569286
[2025-06-03 13:07:57] 2025-06-03 10:51:32,785 | INFO     | intersect: -9083944792.569286
[2025-06-03 13:07:57] 2025-06-03 10:51:32,786 | INFO     | chi2: 1.6908699571855403
[2025-06-03 13:07:57] 2025-06-03 10:51:32,786 | INFO     | current chi2=1.6908699571855403 (change=31.21709277651475 %)
[2025-06-03 13:07:57] 2025-06-03 10:51:32,786 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,788 | INFO     | sum of deviations: 15126336347.000004
[2025-06-03 13:07:57] 2025-06-03 10:51:32,788 | INFO     | mean x: 1748940848.5
[2025-06-03 13:07:57] 2025-06-03 10:51:32,788 | INFO     | mean y: 2481300.5673076925
[2025-06-03 13:07:57] 2025-06-03 10:51:32,788 | INFO     | -- intersect: -9478438740.207941
[2025-06-03 13:07:57] 2025-06-03 10:51:32,788 | INFO     | intersect: -9478438740.207941
[2025-06-03 13:07:57] 2025-06-03 10:51:32,789 | INFO     | chi2: 1.6917940822896615
[2025-06-03 13:07:57] 2025-06-03 10:51:32,789 | INFO     | current chi2=1.6917940822896615 (change=-0.054653824807403835 %)
[2025-06-03 13:07:57] 2025-06-03 10:51:32,789 | INFO     | right removable region: 207
[2025-06-03 13:07:57] 2025-06-03 10:51:32,789 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,794 | INFO     | sum of deviations: -34242103254.999992
[2025-06-03 13:07:57] 2025-06-03 10:51:32,794 | INFO     | mean x: 1748941306.0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,795 | INFO     | mean y: 2496725.187793427
[2025-06-03 13:07:57] 2025-06-03 10:51:32,795 | INFO     | -- intersect: 19988594409.80537
[2025-06-03 13:07:57] 2025-06-03 10:51:32,795 | INFO     | intersect: 19988594409.80537
[2025-06-03 13:07:57] 2025-06-03 10:51:32,795 | INFO     | chi2: 0.9315659606536539
[2025-06-03 13:07:57] 2025-06-03 10:51:32,795 | INFO     | current chi2=0.9315659606536539 (change=62.10482374951434 %)
[2025-06-03 13:07:57] 2025-06-03 10:51:32,796 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,797 | INFO     | sum of deviations: -29523862170.500008
[2025-06-03 13:07:57] 2025-06-03 10:51:32,798 | INFO     | mean x: 1748941458.5
[2025-06-03 13:07:57] 2025-06-03 10:51:32,798 | INFO     | mean y: 2493205.3028846155
[2025-06-03 13:07:57] 2025-06-03 10:51:32,798 | INFO     | -- intersect: 18507534197.452194
[2025-06-03 13:07:57] 2025-06-03 10:51:32,798 | INFO     | intersect: 18507534197.452194
[2025-06-03 13:07:57] 2025-06-03 10:51:32,798 | INFO     | chi2: 0.9150144788202454
[2025-06-03 13:07:57] 2025-06-03 10:51:32,798 | INFO     | current chi2=0.9150144788202454 (change=1.776737507862006 %)
[2025-06-03 13:07:57] 2025-06-03 10:51:32,799 | INFO     | left removable region: 20
[2025-06-03 13:07:57] 2025-06-03 10:51:32,799 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,800 | INFO     | sum of deviations: -858427136.0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,800 | INFO     | mean x: 1748941428.0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,801 | INFO     | mean y: 2491733.0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,801 | INFO     | -- intersect: 742928334.8637705
[2025-06-03 13:07:57] 2025-06-03 10:51:32,801 | INFO     | intersect: 742928334.8637705
[2025-06-03 13:07:57] 2025-06-03 10:51:32,801 | INFO     | chi2: 0.048913603466638124
[2025-06-03 13:07:57] 2025-06-03 10:51:32,801 | INFO     | -- intersect: 742928334.8637705
[2025-06-03 13:07:57] 2025-06-03 10:51:32,801 | INFO     | current memory leak: -0.42 B/s (using 187 data points, chi2=0.05)
[2025-06-03 13:07:57] 2025-06-03 10:51:32,802 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-06-03 13:07:57] 2025-06-03 10:51:32,803 | INFO     | ..............................
[2025-06-03 13:07:57] 2025-06-03 10:51:32,803 | INFO     | . Timing measurements:
[2025-06-03 13:07:57] 2025-06-03 10:51:32,803 | INFO     | . get job = 0 s
[2025-06-03 13:07:57] 2025-06-03 10:51:32,803 | INFO     | . initial setup = 10 s
[2025-06-03 13:07:57] 2025-06-03 10:51:32,803 | INFO     | . payload setup = 20 s
[2025-06-03 13:07:57] 2025-06-03 10:51:32,803 | INFO     | . stage-in = 0 s
[2025-06-03 13:07:57] 2025-06-03 10:51:32,803 | INFO     | . payload execution = 13301 s
[2025-06-03 13:07:57] 2025-06-03 10:51:32,803 | INFO     | . stage-out = 2 s
[2025-06-03 13:07:57] 2025-06-03 10:51:32,803 | INFO     | . log creation = 1 s
[2025-06-03 13:07:57] 2025-06-03 10:51:32,803 | INFO     | ..............................
[2025-06-03 13:07:57] 2025-06-03 10:51:32,958 | INFO     | 
[2025-06-03 13:07:57] 2025-06-03 10:51:32,959 | INFO     | job summary report
[2025-06-03 13:07:57] 2025-06-03 10:51:32,959 | INFO     | --------------------------------------------------
[2025-06-03 13:07:57] 2025-06-03 10:51:32,959 | INFO     | PanDA job id: 6677392534
[2025-06-03 13:07:57] 2025-06-03 10:51:32,959 | INFO     | task id: 45006595
[2025-06-03 13:07:57] 2025-06-03 10:51:32,959 | INFO     | errors: (none)
[2025-06-03 13:07:57] 2025-06-03 10:51:32,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:07:57] 2025-06-03 10:51:32,959 | INFO     | pilot state: finished 
[2025-06-03 13:07:57] 2025-06-03 10:51:32,960 | INFO     | transexitcode: 0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,960 | INFO     | exeerrorcode: 0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,960 | INFO     | exeerrordiag: 
[2025-06-03 13:07:57] 2025-06-03 10:51:32,960 | INFO     | exitcode: 0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,960 | INFO     | exitmsg: OK
[2025-06-03 13:07:57] 2025-06-03 10:51:32,961 | INFO     | cpuconsumptiontime: 48726 s
[2025-06-03 13:07:57] 2025-06-03 10:51:32,961 | INFO     | nevents: 400
[2025-06-03 13:07:57] 2025-06-03 10:51:32,961 | INFO     | neventsw: 0
[2025-06-03 13:07:57] 2025-06-03 10:51:32,961 | INFO     | pid: 22606
[2025-06-03 13:07:57] 2025-06-03 10:51:32,961 | INFO     | pgrp: 22606
[2025-06-03 13:07:57] 2025-06-03 10:51:32,961 | INFO     | corecount: 8
[2025-06-03 13:07:57] 2025-06-03 10:51:32,961 | INFO     | event service: False
[2025-06-03 13:07:57] 2025-06-03 10:51:32,961 | INFO     | sizes: {0: 2404690, 1: 2405375, 2: 2405574, 13: 2405574, 23: 2405630, 34: 2405658, 45: 2405814, 56: 2405842, 66: 2405870, 77: 2405898, 78: 2406216, 88: 2406552, 13
[2025-06-03 13:07:57] 2025-06-03 10:51:32,962 | INFO     | --------------------------------------------------
[2025-06-03 13:07:57] 2025-06-03 10:51:32,962 | INFO     | 
[2025-06-03 13:07:57] 2025-06-03 10:51:32,962 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 13:07:57] 2025-06-03 10:51:33,395 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,396 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,396 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,396 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,397 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:07:57] 2025-06-03 10:51:33,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:07:57] 2025-06-03 10:51:33,398 | INFO     | job 6677392534 has completed (purged errors)
[2025-06-03 13:07:57] 2025-06-03 10:51:33,398 | INFO     | overall cleanup function is called
[2025-06-03 13:07:57] 2025-06-03 10:51:34,407 | INFO     | --- collectZombieJob: --- 10, [22606]
[2025-06-03 13:07:57] 2025-06-03 10:51:34,407 | INFO     | zombie collector waiting for pid 22606
[2025-06-03 13:07:57] 2025-06-03 10:51:34,407 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:07:57] 2025-06-03 10:51:34,408 | INFO     | collected zombie processes
[2025-06-03 13:07:57] 2025-06-03 10:51:34,408 | INFO     | will attempt to kill all subprocesses of pid=22606
[2025-06-03 13:07:57] 2025-06-03 10:51:34,546 | INFO     | process IDs to be killed: [22606] (in reverse order)
[2025-06-03 13:07:57] 2025-06-03 10:51:35,312 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:07:57] 2025-06-03 10:51:35,312 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:07:57] 2025-06-03 10:51:35,319 | INFO     | did not find any defunct processes belonging to 22606
[2025-06-03 13:07:57] 2025-06-03 10:51:35,322 | INFO     | did not find any defunct processes belonging to 22606
[2025-06-03 13:07:57] 2025-06-03 10:51:35,323 | INFO     | ready for new job
[2025-06-03 13:07:57] 2025-06-03 10:51:35,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:07:57] 2025-06-03 10:51:35,325 | INFO     | ***************************************
[2025-06-03 13:07:57] 2025-06-03 10:51:35,325 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-03 13:07:57] 2025-06-03 10:51:35,325 | INFO     | ***************************************
[2025-06-03 13:07:57] 2025-06-03 10:51:35,325 | INFO     | 
[2025-06-03 13:07:57] 2025-06-03 10:51:35,326 | INFO     | pilot is running in a VM
[2025-06-03 13:07:57] 2025-06-03 10:51:35,326 | INFO     | architecture information:
[2025-06-03 13:07:57] 2025-06-03 10:51:35,338 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:07:57] 2025-06-03 10:51:35,647 | INFO     | cat /etc/os-release:
[2025-06-03 13:07:57] NAME="CentOS Linux"
[2025-06-03 13:07:57] VERSION="7 (Core)"
[2025-06-03 13:07:57] ID="centos"
[2025-06-03 13:07:57] ID_LIKE="rhel fedora"
[2025-06-03 13:07:57] VERSION_ID="7"
[2025-06-03 13:07:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:07:57] ANSI_COLOR="0;31"
[2025-06-03 13:07:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:07:57] HOME_URL="https://www.centos.org/"
[2025-06-03 13:07:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:07:57] 
[2025-06-03 13:07:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:07:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:07:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:07:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:07:57] 
[2025-06-03 13:07:57] 2025-06-03 10:51:35,647 | INFO     | ***************************************
[2025-06-03 13:07:57] 2025-06-03 10:51:36,151 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 13:07:57] 2025-06-03 10:51:36,359 | INFO     | sufficient remaining disk space (496780705792 B)
[2025-06-03 13:07:57] 2025-06-03 10:51:36,359 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:07:57] 2025-06-03 10:51:36,359 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:07:57] 2025-06-03 10:51:36,359 | INFO     | update_server=False
[2025-06-03 13:07:57] 2025-06-03 10:51:36,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:07:57] 2025-06-03 10:51:36,360 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:07:57] 2025-06-03 10:51:36,544 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 13:07:57] 2025-06-03 10:51:36,544 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 13:07:57] 2025-06-03 10:51:36,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:07:57] 2025-06-03 10:51:36,545 | INFO     | will abort loop
[2025-06-03 13:07:57] 2025-06-03 10:51:36,885 | INFO     | all payload control threads have been joined
[2025-06-03 13:07:57] 2025-06-03 10:51:37,006 | INFO     | all data control threads have been joined
[2025-06-03 13:07:57] 2025-06-03 10:51:37,365 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:37,550 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:37,551 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:37,730 | INFO     | [job] validate thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:37,813 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:37,891 | INFO     | [payload] control thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:37,938 | INFO     | all job control threads have been joined
[2025-06-03 13:07:57] 2025-06-03 10:51:37,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:07:57] 2025-06-03 10:51:37,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:07:57] 2025-06-03 10:51:38,012 | INFO     | [data] control thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:38,085 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:38,361 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:38,367 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:38,583 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:38,795 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:38,807 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:38,944 | INFO     | [job] control thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:38,988 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:42,001 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:07:57] 2025-06-03 10:51:43,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139700242806592)>', '<ExcThread(monitor, started 139699498768128)>']
[2025-06-03 13:07:57] 2025-06-03 10:51:48,352 | INFO     | all workflow threads have been joined
[2025-06-03 13:07:57] 2025-06-03 10:51:48,352 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:07:57] 2025-06-03 10:51:48,353 | INFO     | traces error code: 0
[2025-06-03 13:07:57] 2025-06-03 10:51:48,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:07:57] 2025-06-03 10:52:05,401 | INFO     | PID=10847 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 13:07:57] 2025-06-03 10:52:05,401 | INFO     | .. there are 9 such processes running
[2025-06-03 13:07:57] 2025-06-03 10:52:05,407 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:07:57] 2025-06-03 10:52:05,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:07:57] 2025-06-03 10:52:05,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:07:57] 2025-06-03 10:52:05,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:07:57] 2025-06-03 10:52:05,408 | INFO     | [monitor] control thread has ended
[2025-06-03 13:07:57] 2025-06-03 10:52:05,709 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:07:57] 2025-06-03 10:52:05,752 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:07:57] 2025-06-03 10:52:05,823 [wrapper] pilotpid: 10847
[2025-06-03 13:07:57] 2025-06-03 10:52:05,942 [wrapper] Pilot exit status: 0
[2025-06-03 13:07:57] 2025-06-03 10:52:06,490 [wrapper] pandaids: 6677392534
[2025-06-03 13:07:57] 2025-06-03 10:52:07,617 [wrapper] cleanup supervisor_pilot  5059 10848
[2025-06-03 13:07:57] 2025-06-03 10:52:07,699 [wrapper] Test setup, not cleaning
[2025-06-03 13:07:57] 2025-06-03 10:52:07,794 [wrapper] apfmon messages muted
[2025-06-03 13:07:57] 2025-06-03 10:52:07,884 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:07:57] 2025-06-03 10:52:07,981 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:07:57]  *** Error codes and diagnostics ***
[2025-06-03 13:07:57]     "exeErrorCode": 0,
[2025-06-03 13:07:57]     "exeErrorDiag": "",
[2025-06-03 13:07:57]     "pilotErrorCode": 0,
[2025-06-03 13:07:57]     "pilotErrorDiag": "",
[2025-06-03 13:07:57]  *** Listing of results directory ***
[2025-06-03 13:07:57] total 396988
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc    549845 Jun  2 11:40 pilot3.tar.gz
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:45 queuedata.json
[2025-06-03 13:07:57] -rwx------. 1 boinc boinc     37140 Jun  2 20:47 runpilot2-wrapper.sh
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc       100 Jun  3 09:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:07:57] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 09:02 run_atlas
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc       105 Jun  3 09:02 job.xml
[2025-06-03 13:07:57] -rw-r--r--. 2 boinc boinc 217654996 Jun  3 09:02 EVNT.45006593._000320.pool.root.1
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc      6390 Jun  3 09:02 init_data.xml
[2025-06-03 13:07:57] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:02 start_atlas.sh
[2025-06-03 13:07:57] drwxrwx--x. 2 boinc boinc        68 Jun  3 09:02 shared
[2025-06-03 13:07:57] -rw-r--r--. 2 boinc boinc    564113 Jun  3 09:02 input.tar.gz
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc         0 Jun  3 09:02 boinc_lockfile
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc      2521 Jun  3 09:02 pandaJob.out
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc    986901 Jun  3 09:05 agis_schedconf.cvmfs.json
[2025-06-03 13:07:57] drwx------. 6 boinc boinc      4096 Jun  3 09:05 pilot3
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc 181820716 Jun  3 12:48 HITS.45006595._007982.pool.root.1
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc       530 Jun  3 12:49 boinc_task_state.xml
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc      1031 Jun  3 12:50 memory_monitor_summary.json
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc   1603667 Jun  3 12:50 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc    372450 Jun  3 12:50 log.45006595._007982.job.log.tgz.1
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc      7699 Jun  3 12:51 heartbeat.json
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc        95 Jun  3 12:52 pilot_heartbeat.json
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc       820 Jun  3 12:52 pilotlog.txt
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc   1183934 Jun  3 12:52 log.45006595._007982.job.log.1
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc       357 Jun  3 12:52 output.list
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:52 runtime_log
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc   1576960 Jun  3 12:52 result.tar.gz
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc      8659 Jun  3 12:52 runtime_log.err
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc       657 Jun  3 12:52 JvHKDmTNPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmI5fKDmxNGWum.diag
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc      8192 Jun  3 13:07 boinc_mmap_file
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc        28 Jun  3 13:07 wrapper_checkpoint.txt
[2025-06-03 13:07:57] -rw-r--r--. 1 boinc boinc     20642 Jun  3 13:07 stderr.txt
[2025-06-03 13:07:57] HITS file was successfully produced:
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc 181820716 Jun  3 12:48 shared/HITS.pool.root.1
[2025-06-03 13:07:57]  *** Contents of shared directory: ***
[2025-06-03 13:07:57] total 392224
[2025-06-03 13:07:57] -rw-r--r--. 2 boinc boinc 217654996 Jun  3 09:02 ATLAS.root_0
[2025-06-03 13:07:57] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:02 start_atlas.sh
[2025-06-03 13:07:57] -rw-r--r--. 2 boinc boinc    564113 Jun  3 09:02 input.tar.gz
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc 181820716 Jun  3 12:48 HITS.pool.root.1
[2025-06-03 13:07:57] -rw-------. 1 boinc boinc   1576960 Jun  3 12:52 result.tar.gz
13:07:59 (5033): run_atlas exited; CPU time 48905.848655
13:07:59 (5033): called boinc_finish(0)

</stderr_txt>
]]>

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