Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:42:46 (6003): wrapper (7.7.26015): starting
08:42:46 (6003): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:42:46] Arguments: --nthreads 8
[2025-06-03 08:42:46] Threads: 8
[2025-06-03 08:42:46] Checking for CVMFS
[2025-06-03 08:42:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:42:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:42:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:42:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:42:49] 2.11.2.0 14465 31419 93232 146731 0 16 24836432 25165825 4635 130560 0 16708711 99.810 18642368 1984 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:42:49] CVMFS is ok
[2025-06-03 08:42:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:42:49] Checking for apptainer binary...
[2025-06-03 08:42:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:42:49] Running /usr/bin/apptainer --version
[2025-06-03 08:42:49] apptainer version 1.3.2-1.el7
[2025-06-03 08:42:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:13:13] cg-vwn249.simple-grid.lan
[2025-06-03 09:13:13] apptainer works
[2025-06-03 09:13:14] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:13:14] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:13:14] Starting ATLAS job with PandaID=6677392336
[2025-06-03 09:13:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:20:09]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:20:09] 2025-06-03 10:57:28,579 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:20:09] 2025-06-03 10:57:28,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:20:09] 2025-06-03 10:57:28,584 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:20:09] 2025-06-03 10:57:28,584 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,586 | INFO     | sum of deviations: 71963333091.99998
[2025-06-03 13:20:09] 2025-06-03 10:57:28,586 | INFO     | mean x: 1748941793.5
[2025-06-03 13:20:09] 2025-06-03 10:57:28,586 | INFO     | mean y: 2428707.9134615385
[2025-06-03 13:20:09] 2025-06-03 10:57:28,586 | INFO     | -- intersect: -45102939830.43792
[2025-06-03 13:20:09] 2025-06-03 10:57:28,587 | INFO     | intersect: -45102939830.43792
[2025-06-03 13:20:09] 2025-06-03 10:57:28,587 | INFO     | chi2: 6.091514164504071
[2025-06-03 13:20:09] 2025-06-03 10:57:28,587 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,589 | INFO     | sum of deviations: 83910144601.00002
[2025-06-03 13:20:09] 2025-06-03 10:57:28,589 | INFO     | mean x: 1748941641.0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,589 | INFO     | mean y: 2437775.0049261083
[2025-06-03 13:20:09] 2025-06-03 10:57:28,589 | INFO     | -- intersect: -56573764126.181854
[2025-06-03 13:20:09] 2025-06-03 10:57:28,589 | INFO     | intersect: -56573764126.181854
[2025-06-03 13:20:09] 2025-06-03 10:57:28,590 | INFO     | chi2: 5.370134713518321
[2025-06-03 13:20:09] 2025-06-03 10:57:28,590 | INFO     | current chi2=5.370134713518321 (change=11.842366799199253 %)
[2025-06-03 13:20:09] 2025-06-03 10:57:28,590 | INFO     | right removable region: 202
[2025-06-03 13:20:09] 2025-06-03 10:57:28,590 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,592 | INFO     | sum of deviations: 1486264512.000002
[2025-06-03 13:20:09] 2025-06-03 10:57:28,592 | INFO     | mean x: 1748941946.0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,592 | INFO     | mean y: 2483356.6896551726
[2025-06-03 13:20:09] 2025-06-03 10:57:28,592 | INFO     | -- intersect: -999626890.8065126
[2025-06-03 13:20:09] 2025-06-03 10:57:28,592 | INFO     | intersect: -999626890.8065126
[2025-06-03 13:20:09] 2025-06-03 10:57:28,592 | INFO     | chi2: 1.48170741473118
[2025-06-03 13:20:09] 2025-06-03 10:57:28,593 | INFO     | current chi2=1.48170741473118 (change=75.67587672429207 %)
[2025-06-03 13:20:09] 2025-06-03 10:57:28,593 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 13:20:09] 2025-06-03 10:57:28,594 | INFO     | sum of deviations: -22784744521.999992
[2025-06-03 13:20:09] 2025-06-03 10:57:28,595 | INFO     | mean x: 1748942098.5
[2025-06-03 13:20:09] 2025-06-03 10:57:28,595 | INFO     | mean y: 2503021.3333333335
[2025-06-03 13:20:09] 2025-06-03 10:57:28,595 | INFO     | -- intersect: 16558551074.278667
[2025-06-03 13:20:09] 2025-06-03 10:57:28,595 | INFO     | intersect: 16558551074.278667
[2025-06-03 13:20:09] 2025-06-03 10:57:28,595 | INFO     | chi2: 0.8269756579153927
[2025-06-03 13:20:09] 2025-06-03 10:57:28,595 | INFO     | current chi2=0.8269756579153927 (change=44.187654749272646 %)
[2025-06-03 13:20:09] 2025-06-03 10:57:28,596 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,597 | INFO     | sum of deviations: -24945754617.0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,597 | INFO     | mean x: 1748942251.0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,597 | INFO     | mean y: 2504841.8497409327
[2025-06-03 13:20:09] 2025-06-03 10:57:28,597 | INFO     | -- intersect: 19574424484.241447
[2025-06-03 13:20:09] 2025-06-03 10:57:28,597 | INFO     | intersect: 19574424484.241447
[2025-06-03 13:20:09] 2025-06-03 10:57:28,598 | INFO     | chi2: 0.8070021809996787
[2025-06-03 13:20:09] 2025-06-03 10:57:28,598 | INFO     | current chi2=0.8070021809996787 (change=2.4152436319664345 %)
[2025-06-03 13:20:09] 2025-06-03 10:57:28,598 | INFO     | left removable region: 30
[2025-06-03 13:20:09] 2025-06-03 10:57:28,598 | INFO     | sum of square deviations: 1577789583.0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,600 | INFO     | sum of deviations: -9674901492.500002
[2025-06-03 13:20:09] 2025-06-03 10:57:28,600 | INFO     | mean x: 1748942525.5
[2025-06-03 13:20:09] 2025-06-03 10:57:28,600 | INFO     | mean y: 2514807.947674419
[2025-06-03 13:20:09] 2025-06-03 10:57:28,600 | INFO     | -- intersect: 10726914837.312473
[2025-06-03 13:20:09] 2025-06-03 10:57:28,600 | INFO     | intersect: 10726914837.312473
[2025-06-03 13:20:09] 2025-06-03 10:57:28,600 | INFO     | chi2: 0.014081265956570955
[2025-06-03 13:20:09] 2025-06-03 10:57:28,600 | INFO     | -- intersect: 10726914837.312473
[2025-06-03 13:20:09] 2025-06-03 10:57:28,601 | INFO     | current memory leak: -6.13 B/s (using 172 data points, chi2=0.01)
[2025-06-03 13:20:09] 2025-06-03 10:57:28,601 | INFO     | ..............................
[2025-06-03 13:20:09] 2025-06-03 10:57:28,602 | INFO     | . Timing measurements:
[2025-06-03 13:20:09] 2025-06-03 10:57:28,602 | INFO     | . get job = 0 s
[2025-06-03 13:20:09] 2025-06-03 10:57:28,602 | INFO     | . initial setup = 5 s
[2025-06-03 13:20:09] 2025-06-03 10:57:28,602 | INFO     | . payload setup = 150 s
[2025-06-03 13:20:09] 2025-06-03 10:57:28,602 | INFO     | . stage-in = 0 s
[2025-06-03 13:20:09] 2025-06-03 10:57:28,602 | INFO     | . payload execution = 12821 s
[2025-06-03 13:20:09] 2025-06-03 10:57:28,602 | INFO     | . stage-out = 5 s
[2025-06-03 13:20:09] 2025-06-03 10:57:28,602 | INFO     | . log creation = 1 s
[2025-06-03 13:20:09] 2025-06-03 10:57:28,602 | INFO     | ..............................
[2025-06-03 13:20:09] 2025-06-03 10:57:28,770 | INFO     | 
[2025-06-03 13:20:09] 2025-06-03 10:57:28,770 | INFO     | job summary report
[2025-06-03 13:20:09] 2025-06-03 10:57:28,770 | INFO     | --------------------------------------------------
[2025-06-03 13:20:09] 2025-06-03 10:57:28,770 | INFO     | PanDA job id: 6677392336
[2025-06-03 13:20:09] 2025-06-03 10:57:28,770 | INFO     | task id: 45006595
[2025-06-03 13:20:09] 2025-06-03 10:57:28,770 | INFO     | errors: (none)
[2025-06-03 13:20:09] 2025-06-03 10:57:28,771 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:20:09] 2025-06-03 10:57:28,771 | INFO     | pilot state: finished 
[2025-06-03 13:20:09] 2025-06-03 10:57:28,771 | INFO     | transexitcode: 0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,771 | INFO     | exeerrorcode: 0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,771 | INFO     | exeerrordiag: 
[2025-06-03 13:20:09] 2025-06-03 10:57:28,771 | INFO     | exitcode: 0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,771 | INFO     | exitmsg: OK
[2025-06-03 13:20:09] 2025-06-03 10:57:28,771 | INFO     | cpuconsumptiontime: 47718 s
[2025-06-03 13:20:09] 2025-06-03 10:57:28,771 | INFO     | nevents: 400
[2025-06-03 13:20:09] 2025-06-03 10:57:28,771 | INFO     | neventsw: 0
[2025-06-03 13:20:09] 2025-06-03 10:57:28,771 | INFO     | pid: 3604
[2025-06-03 13:20:09] 2025-06-03 10:57:28,772 | INFO     | pgrp: 3604
[2025-06-03 13:20:09] 2025-06-03 10:57:28,772 | INFO     | corecount: 8
[2025-06-03 13:20:09] 2025-06-03 10:57:28,772 | INFO     | event service: False
[2025-06-03 13:20:09] 2025-06-03 10:57:28,772 | INFO     | sizes: {0: 2404349, 1: 2405206, 2: 2405206, 12: 2405234, 23: 2405262, 34: 2405290, 45: 2405446, 55: 2405474, 66: 2405502, 77: 2405530, 88: 2406100, 98: 2406100, 12
[2025-06-03 13:20:09] 2025-06-03 10:57:28,772 | INFO     | --------------------------------------------------
[2025-06-03 13:20:09] 2025-06-03 10:57:28,772 | INFO     | 
[2025-06-03 13:20:09] 2025-06-03 10:57:28,772 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2025-06-03 13:20:09] 2025-06-03 10:57:29,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,314 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,314 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,314 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,315 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,315 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:20:09] 2025-06-03 10:57:29,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,316 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:20:09] 2025-06-03 10:57:29,316 | INFO     | job 6677392336 has completed (purged errors)
[2025-06-03 13:20:09] 2025-06-03 10:57:29,316 | INFO     | overall cleanup function is called
[2025-06-03 13:20:09] 2025-06-03 10:57:30,325 | INFO     | --- collectZombieJob: --- 10, [3604]
[2025-06-03 13:20:09] 2025-06-03 10:57:30,325 | INFO     | zombie collector waiting for pid 3604
[2025-06-03 13:20:09] 2025-06-03 10:57:30,325 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:20:09] 2025-06-03 10:57:30,325 | INFO     | collected zombie processes
[2025-06-03 13:20:09] 2025-06-03 10:57:30,325 | INFO     | will attempt to kill all subprocesses of pid=3604
[2025-06-03 13:20:09] 2025-06-03 10:57:30,445 | INFO     | process IDs to be killed: [3604] (in reverse order)
[2025-06-03 13:20:09] 2025-06-03 10:57:31,478 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:20:09] 2025-06-03 10:57:31,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:20:09] 2025-06-03 10:57:31,482 | INFO     | did not find any defunct processes belonging to 3604
[2025-06-03 13:20:09] 2025-06-03 10:57:31,491 | INFO     | did not find any defunct processes belonging to 3604
[2025-06-03 13:20:09] 2025-06-03 10:57:31,492 | INFO     | ready for new job
[2025-06-03 13:20:09] 2025-06-03 10:57:31,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:20:09] 2025-06-03 10:57:31,494 | INFO     | **************************************
[2025-06-03 13:20:09] 2025-06-03 10:57:31,494 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:20:09] 2025-06-03 10:57:31,494 | INFO     | **************************************
[2025-06-03 13:20:09] 2025-06-03 10:57:31,494 | INFO     | 
[2025-06-03 13:20:09] 2025-06-03 10:57:31,495 | INFO     | pilot is running in a VM
[2025-06-03 13:20:09] 2025-06-03 10:57:31,495 | INFO     | architecture information:
[2025-06-03 13:20:09] 2025-06-03 10:57:31,506 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:20:09] 2025-06-03 10:57:31,800 | INFO     | cat /etc/os-release:
[2025-06-03 13:20:09] NAME="CentOS Linux"
[2025-06-03 13:20:09] VERSION="7 (Core)"
[2025-06-03 13:20:09] ID="centos"
[2025-06-03 13:20:09] ID_LIKE="rhel fedora"
[2025-06-03 13:20:09] VERSION_ID="7"
[2025-06-03 13:20:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:20:09] ANSI_COLOR="0;31"
[2025-06-03 13:20:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:20:09] HOME_URL="https://www.centos.org/"
[2025-06-03 13:20:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:20:09] 
[2025-06-03 13:20:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:20:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:20:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:20:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:20:09] 
[2025-06-03 13:20:09] 2025-06-03 10:57:31,801 | INFO     | **************************************
[2025-06-03 13:20:09] 2025-06-03 10:57:32,304 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2025-06-03 13:20:09] 2025-06-03 10:57:32,562 | INFO     | sufficient remaining disk space (496699965440 B)
[2025-06-03 13:20:09] 2025-06-03 10:57:32,563 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:20:09] 2025-06-03 10:57:32,563 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:20:09] 2025-06-03 10:57:32,563 | INFO     | update_server=False
[2025-06-03 13:20:09] 2025-06-03 10:57:32,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:20:09] 2025-06-03 10:57:32,851 | INFO     | PID=28883 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 13:20:09] 2025-06-03 10:57:32,851 | INFO     | .. there are 9 such processes running
[2025-06-03 13:20:09] 2025-06-03 10:57:32,851 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:20:09] 2025-06-03 10:57:32,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:20:09] 2025-06-03 10:57:32,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:20:09] 2025-06-03 10:57:32,871 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 13:20:09] 2025-06-03 10:57:32,871 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 13:20:09] 2025-06-03 10:57:32,871 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:20:09] 2025-06-03 10:57:32,871 | INFO     | will abort loop
[2025-06-03 13:20:09] 2025-06-03 10:57:33,100 | INFO     | all data control threads have been joined
[2025-06-03 13:20:09] 2025-06-03 10:57:33,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:20:09] 2025-06-03 10:57:33,570 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:33,577 | INFO     | [job] validate thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:33,766 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:20:09] 2025-06-03 10:57:33,769 | INFO     | all payload control threads have been joined
[2025-06-03 13:20:09] 2025-06-03 10:57:33,877 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:33,904 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:33,962 | INFO     | all job control threads have been joined
[2025-06-03 13:20:09] 2025-06-03 10:57:33,971 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:34,021 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:34,106 | INFO     | [data] control thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:34,183 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:34,287 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:34,398 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:34,772 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:34,776 | INFO     | [payload] control thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:34,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:20:09] 2025-06-03 10:57:34,959 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:34,968 | INFO     | [job] control thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:35,324 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:38,856 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:20:09] 2025-06-03 10:57:39,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891836688192)>', '<ExcThread(monitor, started 139891035858688)>']
[2025-06-03 13:20:09] 2025-06-03 10:57:39,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:20:09] 2025-06-03 10:57:39,892 | INFO     | [monitor] control thread has ended
[2025-06-03 13:20:09] 2025-06-03 10:57:44,584 | INFO     | all workflow threads have been joined
[2025-06-03 13:20:09] 2025-06-03 10:57:44,584 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:20:09] 2025-06-03 10:57:44,584 | INFO     | traces error code: 0
[2025-06-03 13:20:09] 2025-06-03 10:57:44,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:20:09] 2025-06-03 10:57:44,960 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:20:09] 2025-06-03 10:57:45,019 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:20:09] 2025-06-03 10:57:45,084 [wrapper] pilotpid: 28883
[2025-06-03 13:20:09] 2025-06-03 10:57:45,181 [wrapper] Pilot exit status: 0
[2025-06-03 13:20:09] 2025-06-03 10:57:45,651 [wrapper] pandaids: 6677392336
[2025-06-03 13:20:09] 2025-06-03 10:57:46,421 [wrapper] cleanup supervisor_pilot  3176 28884
[2025-06-03 13:20:09] 2025-06-03 10:57:46,508 [wrapper] Test setup, not cleaning
[2025-06-03 13:20:09] 2025-06-03 10:57:46,563 [wrapper] apfmon messages muted
[2025-06-03 13:20:09] 2025-06-03 10:57:46,637 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:20:09] 2025-06-03 10:57:46,675 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:20:09]  *** Error codes and diagnostics ***
[2025-06-03 13:20:09]     "exeErrorCode": 0,
[2025-06-03 13:20:09]     "exeErrorDiag": "",
[2025-06-03 13:20:09]     "pilotErrorCode": 0,
[2025-06-03 13:20:09]     "pilotErrorDiag": "",
[2025-06-03 13:20:09]  *** Listing of results directory ***
[2025-06-03 13:20:09] total 386664
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:30 pilot3.tar.gz
[2025-06-03 13:20:09] -rwx------. 1 boinc boinc     37140 Jun  2 20:40 runpilot2-wrapper.sh
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:40 queuedata.json
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:20:09] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:42 run_atlas
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:42 job.xml
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc      6393 Jun  3 08:42 init_data.xml
[2025-06-03 13:20:09] -rw-r--r--. 2 boinc boinc 214036272 Jun  3 08:42 EVNT.45006593._000313.pool.root.1
[2025-06-03 13:20:09] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:42 start_atlas.sh
[2025-06-03 13:20:09] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:42 shared
[2025-06-03 13:20:09] -rw-r--r--. 2 boinc boinc    508877 Jun  3 08:42 input.tar.gz
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:42 boinc_lockfile
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc      2521 Jun  3 09:13 pandaJob.out
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc    986901 Jun  3 09:16 agis_schedconf.cvmfs.json
[2025-06-03 13:20:09] drwx------. 4 boinc boinc      4096 Jun  3 09:16 pilot3
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc 175052736 Jun  3 12:54 HITS.45006595._007824.pool.root.1
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc       531 Jun  3 12:54 boinc_task_state.xml
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc      1015 Jun  3 12:55 memory_monitor_summary.json
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc   1603667 Jun  3 12:55 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc    386010 Jun  3 12:55 log.45006595._007824.job.log.tgz.1
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc      7688 Jun  3 12:57 heartbeat.json
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc        95 Jun  3 12:57 pilot_heartbeat.json
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc      4995 Jun  3 12:57 pilotlog.txt
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc   1131553 Jun  3 12:57 log.45006595._007824.job.log.1
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc       357 Jun  3 12:57 output.list
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:57 runtime_log
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc   1536000 Jun  3 12:57 result.tar.gz
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc       657 Jun  3 12:57 WsMLDmSGPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmL3fKDmmhJqWo.diag
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc      8673 Jun  3 12:57 runtime_log.err
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc        28 Jun  3 13:20 wrapper_checkpoint.txt
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc      8192 Jun  3 13:20 boinc_mmap_file
[2025-06-03 13:20:09] -rw-r--r--. 1 boinc boinc     20613 Jun  3 13:20 stderr.txt
[2025-06-03 13:20:09] HITS file was successfully produced:
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc 175052736 Jun  3 12:54 shared/HITS.pool.root.1
[2025-06-03 13:20:09]  *** Contents of shared directory: ***
[2025-06-03 13:20:09] total 381988
[2025-06-03 13:20:09] -rw-r--r--. 2 boinc boinc 214036272 Jun  3 08:42 ATLAS.root_0
[2025-06-03 13:20:09] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:42 start_atlas.sh
[2025-06-03 13:20:09] -rw-r--r--. 2 boinc boinc    508877 Jun  3 08:42 input.tar.gz
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc 175052736 Jun  3 12:54 HITS.pool.root.1
[2025-06-03 13:20:09] -rw-------. 1 boinc boinc   1536000 Jun  3 12:57 result.tar.gz
13:20:11 (6003): run_atlas exited; CPU time 47896.362486
13:20:11 (6003): called boinc_finish(0)

</stderr_txt>
]]>

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