Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:53:52 (3432248): wrapper (7.7.26015): starting
04:53:52 (3432248): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 04:53:52] Arguments: --nthreads 4
[2025-06-04 04:53:52] Threads: 4
[2025-06-04 04:53:52] Checking for CVMFS
[2025-06-04 04:53:52] No cvmfs_config command found, will try listing directly
[2025-06-04 04:53:52] CVMFS is ok
[2025-06-04 04:53:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:53:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:53:52] Further information can be found at the LHC@home message board.
[2025-06-04 04:53:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:53:52] Checking for apptainer binary...
[2025-06-04 04:53:52] which: no apptainer in ((null))
[2025-06-04 04:53:52] apptainer is not installed, using version from CVMFS
[2025-06-04 04:53:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:53:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-04 04:53:52] apptainer works
[2025-06-04 04:53:52] Set ATHENA_PROC_NUMBER=4
[2025-06-04 04:53:52] Set ATHENA_CORE_NUMBER=4
[2025-06-04 04:53:52] Starting ATLAS job with PandaID=6677392569
[2025-06-04 04:53:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:37:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:37:37] 2025-06-04 05:34:48,600 | WARNING  | process 3442927 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:37:37] 2025-06-04 05:34:48,602 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6677392569/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:37:37] 2025-06-04 05:34:49,417 | INFO     | PID=3435925 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 07:37:37] 2025-06-04 05:34:49,417 | INFO     | .. there are 7 such processes running
[2025-06-04 07:37:37] 2025-06-04 05:34:49,510 | INFO     | number of running child processes to parent process 3442927: 1
[2025-06-04 07:37:37] 2025-06-04 05:34:49,510 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:37:37] 2025-06-04 05:34:52,014 | INFO     | monitor loop #700: job 0:6677392569 is in state 'finished'
[2025-06-04 07:37:37] 2025-06-04 05:34:52,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:37:37] 2025-06-04 05:34:52,167 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 07:37:37] 2025-06-04 05:34:52,167 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6677392569/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:37:37] 2025-06-04 05:34:52,168 | INFO     | extracted standard info from prmon json
[2025-06-04 07:37:37] 2025-06-04 05:34:52,168 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:37:37] 2025-06-04 05:34:52,168 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:37:37] 2025-06-04 05:34:52,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:37:37] 2025-06-04 05:34:52,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:37:37] 2025-06-04 05:34:52,172 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:37:37] 2025-06-04 05:34:52,172 | INFO     | sum of square deviations: 1223016419.5
[2025-06-04 07:37:37] 2025-06-04 05:34:52,173 | INFO     | sum of deviations: -10663671232.500006
[2025-06-04 07:37:37] 2025-06-04 05:34:52,173 | INFO     | mean x: 1749010461.5
[2025-06-04 07:37:37] 2025-06-04 05:34:52,174 | INFO     | mean y: 2356733.398734177
[2025-06-04 07:37:37] 2025-06-04 05:34:52,174 | INFO     | -- intersect: 15252252193.726288
[2025-06-04 07:37:37] 2025-06-04 05:34:52,174 | INFO     | intersect: 15252252193.726288
[2025-06-04 07:37:37] 2025-06-04 05:34:52,174 | INFO     | chi2: 1.825367061679205
[2025-06-04 07:37:37] 2025-06-04 05:34:52,174 | INFO     | sum of square deviations: 1110539892.0
[2025-06-04 07:37:37] 2025-06-04 05:34:52,175 | INFO     | sum of deviations: -10290534934.000002
[2025-06-04 07:37:37] 2025-06-04 05:34:52,175 | INFO     | mean x: 1749010309.0
[2025-06-04 07:37:37] 2025-06-04 05:34:52,176 | INFO     | mean y: 2357246.117647059
[2025-06-04 07:37:37] 2025-06-04 05:34:52,176 | INFO     | -- intersect: 16209115611.435907
[2025-06-04 07:37:37] 2025-06-04 05:34:52,176 | INFO     | intersect: 16209115611.435907
[2025-06-04 07:37:37] 2025-06-04 05:34:52,176 | INFO     | chi2: 1.822058989974332
[2025-06-04 07:37:37] 2025-06-04 05:34:52,176 | INFO     | current chi2=1.822058989974332 (change=0.18122775272551656 %)
[2025-06-04 07:37:37] 2025-06-04 05:34:52,176 | INFO     | right removable region: 152
[2025-06-04 07:37:37] 2025-06-04 05:34:52,176 | INFO     | sum of square deviations: 1110539892.0
[2025-06-04 07:37:37] 2025-06-04 05:34:52,177 | INFO     | sum of deviations: -32309837120.99999
[2025-06-04 07:37:37] 2025-06-04 05:34:52,177 | INFO     | mean x: 1749010614.0
[2025-06-04 07:37:37] 2025-06-04 05:34:52,177 | INFO     | mean y: 2385603.581699346
[2025-06-04 07:37:37] 2025-06-04 05:34:52,178 | INFO     | -- intersect: 50887768891.76724
[2025-06-04 07:37:37] 2025-06-04 05:34:52,178 | INFO     | intersect: 50887768891.76724
[2025-06-04 07:37:37] 2025-06-04 05:34:52,178 | INFO     | chi2: 0.3069714390511588
[2025-06-04 07:37:37] 2025-06-04 05:34:52,178 | INFO     | current chi2=0.3069714390511588 (change=83.18302956728235 %)
[2025-06-04 07:37:37] 2025-06-04 05:34:52,178 | INFO     | sum of square deviations: 1005179777.0
[2025-06-04 07:37:37] 2025-06-04 05:34:52,179 | INFO     | sum of deviations: -25314111321.5
[2025-06-04 07:37:37] 2025-06-04 05:34:52,179 | INFO     | mean x: 1749010766.5
[2025-06-04 07:37:37] 2025-06-04 05:34:52,179 | INFO     | mean y: 2375466.8175675673
[2025-06-04 07:37:37] 2025-06-04 05:34:52,179 | INFO     | -- intersect: 44048877653.54336
[2025-06-04 07:37:37] 2025-06-04 05:34:52,180 | INFO     | intersect: 44048877653.54336
[2025-06-04 07:37:37] 2025-06-04 05:34:52,180 | INFO     | chi2: 0.2828442431272766
[2025-06-04 07:37:37] 2025-06-04 05:34:52,180 | INFO     | current chi2=0.2828442431272766 (change=7.859752685285253 %)
[2025-06-04 07:37:37] 2025-06-04 05:34:52,180 | INFO     | left removable region: 20
[2025-06-04 07:37:37] 2025-06-04 05:34:52,180 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 07:37:37] 2025-06-04 05:34:52,181 | INFO     | sum of deviations: -9587644256.000002
[2025-06-04 07:37:37] 2025-06-04 05:34:52,181 | INFO     | mean x: 1749010888.5
[2025-06-04 07:37:37] 2025-06-04 05:34:52,181 | INFO     | mean y: 2351139.742424242
[2025-06-04 07:37:37] 2025-06-04 05:34:52,181 | INFO     | -- intersect: 23516492937.72207
[2025-06-04 07:37:37] 2025-06-04 05:34:52,181 | INFO     | intersect: 23516492937.72207
[2025-06-04 07:37:37] 2025-06-04 05:34:52,181 | INFO     | chi2: 0.16435576719908968
[2025-06-04 07:37:37] 2025-06-04 05:34:52,182 | INFO     | -- intersect: 23516492937.72207
[2025-06-04 07:37:37] 2025-06-04 05:34:52,182 | INFO     | current memory leak: -13.44 B/s (using 132 data points, chi2=0.16)
[2025-06-04 07:37:37] 2025-06-04 05:34:52,182 | INFO     | ..............................
[2025-06-04 07:37:37] 2025-06-04 05:34:52,182 | INFO     | . Timing measurements:
[2025-06-04 07:37:37] 2025-06-04 05:34:52,183 | INFO     | . get job = 0 s
[2025-06-04 07:37:37] 2025-06-04 05:34:52,183 | INFO     | . initial setup = 1 s
[2025-06-04 07:37:37] 2025-06-04 05:34:52,183 | INFO     | . payload setup = 8 s
[2025-06-04 07:37:37] 2025-06-04 05:34:52,183 | INFO     | . stage-in = 0 s
[2025-06-04 07:37:37] 2025-06-04 05:34:52,183 | INFO     | . payload execution = 9613 s
[2025-06-04 07:37:37] 2025-06-04 05:34:52,183 | INFO     | . stage-out = 0 s
[2025-06-04 07:37:37] 2025-06-04 05:34:52,183 | INFO     | . log creation = 0 s
[2025-06-04 07:37:37] 2025-06-04 05:34:52,183 | INFO     | ..............................
[2025-06-04 07:37:37] 2025-06-04 05:34:52,447 | INFO     | 
[2025-06-04 07:37:37] 2025-06-04 05:34:52,447 | INFO     | job summary report
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | --------------------------------------------------
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | PanDA job id: 6677392569
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | task id: 45006595
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | errors: (none)
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | pilot state: finished 
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | transexitcode: 0
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | exeerrorcode: 0
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | exeerrordiag: 
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | exitcode: 0
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | exitmsg: OK
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | cpuconsumptiontime: 36582 s
[2025-06-04 07:37:37] 2025-06-04 05:34:52,448 | INFO     | nevents: 400
[2025-06-04 07:37:37] 2025-06-04 05:34:52,449 | INFO     | neventsw: 0
[2025-06-04 07:37:37] 2025-06-04 05:34:52,449 | INFO     | pid: 3442927
[2025-06-04 07:37:37] 2025-06-04 05:34:52,449 | INFO     | pgrp: 3442927
[2025-06-04 07:37:37] 2025-06-04 05:34:52,449 | INFO     | corecount: 4
[2025-06-04 07:37:37] 2025-06-04 05:34:52,449 | INFO     | event service: False
[2025-06-04 07:37:37] 2025-06-04 05:34:52,449 | INFO     | sizes: {0: 2404349, 1: 2405216, 6: 2405422, 12: 2405450, 9624: 2433624, 9626: 2442587, 9628: 2442771, 9632: 2442941}
[2025-06-04 07:37:37] 2025-06-04 05:34:52,449 | INFO     | --------------------------------------------------
[2025-06-04 07:37:37] 2025-06-04 05:34:52,449 | INFO     | 
[2025-06-04 07:37:37] 2025-06-04 05:34:52,449 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-04 07:37:37] 2025-06-04 05:34:52,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,473 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,473 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,473 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:37:37] 2025-06-04 05:34:52,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:37:37] 2025-06-04 05:34:52,475 | INFO     | job 6677392569 has completed (purged errors)
[2025-06-04 07:37:37] 2025-06-04 05:34:52,476 | INFO     | overall cleanup function is called
[2025-06-04 07:37:37] 2025-06-04 05:34:53,482 | INFO     | --- collectZombieJob: --- 10, [3442927]
[2025-06-04 07:37:37] 2025-06-04 05:34:53,483 | INFO     | zombie collector waiting for pid 3442927
[2025-06-04 07:37:37] 2025-06-04 05:34:53,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:37:37] 2025-06-04 05:34:53,483 | INFO     | collected zombie processes
[2025-06-04 07:37:37] 2025-06-04 05:34:53,483 | INFO     | will attempt to kill all subprocesses of pid=3442927
[2025-06-04 07:37:37] 2025-06-04 05:34:53,850 | INFO     | process IDs to be killed: [3442927] (in reverse order)
[2025-06-04 07:37:37] 2025-06-04 05:34:53,956 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:37:37] 2025-06-04 05:34:53,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:37:37] 2025-06-04 05:34:53,968 | INFO     | did not find any defunct processes belonging to 3442927
[2025-06-04 07:37:37] 2025-06-04 05:34:53,980 | INFO     | did not find any defunct processes belonging to 3442927
[2025-06-04 07:37:37] 2025-06-04 05:34:53,980 | INFO     | ready for new job
[2025-06-04 07:37:37] 2025-06-04 05:34:53,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:37:37] 2025-06-04 05:34:53,983 | INFO     | **************************************
[2025-06-04 07:37:37] 2025-06-04 05:34:53,983 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:37:37] 2025-06-04 05:34:53,983 | INFO     | **************************************
[2025-06-04 07:37:37] 2025-06-04 05:34:53,983 | INFO     | 
[2025-06-04 07:37:37] 2025-06-04 05:34:53,987 | INFO     | architecture information:
[2025-06-04 07:37:37] 2025-06-04 05:34:53,988 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:37:37] 2025-06-04 05:34:54,003 | INFO     | cat /etc/os-release:
[2025-06-04 07:37:37] NAME="CentOS Linux"
[2025-06-04 07:37:37] VERSION="7 (Core)"
[2025-06-04 07:37:37] ID="centos"
[2025-06-04 07:37:37] ID_LIKE="rhel fedora"
[2025-06-04 07:37:37] VERSION_ID="7"
[2025-06-04 07:37:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:37:37] ANSI_COLOR="0;31"
[2025-06-04 07:37:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:37:37] HOME_URL="https://www.centos.org/"
[2025-06-04 07:37:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:37:37] 
[2025-06-04 07:37:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:37:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:37:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:37:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:37:37] 
[2025-06-04 07:37:37] 2025-06-04 05:34:54,004 | INFO     | **************************************
[2025-06-04 07:37:37] 2025-06-04 05:34:54,506 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-04 07:37:37] 2025-06-04 05:34:54,524 | INFO     | sufficient remaining disk space (645372313600 B)
[2025-06-04 07:37:37] 2025-06-04 05:34:54,525 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:37:37] 2025-06-04 05:34:54,525 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:37:37] 2025-06-04 05:34:54,525 | INFO     | update_server=False
[2025-06-04 07:37:37] 2025-06-04 05:34:54,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:37:37] 2025-06-04 05:34:54,526 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:37:37] 2025-06-04 05:34:54,839 | INFO     | all payload control threads have been joined
[2025-06-04 07:37:37] 2025-06-04 05:34:55,237 | INFO     | all data control threads have been joined
[2025-06-04 07:37:37] 2025-06-04 05:34:55,432 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:37:37] 2025-06-04 05:34:55,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:37:37] 2025-06-04 05:34:55,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:37:37] 2025-06-04 05:34:55,447 | INFO     | all job control threads have been joined
[2025-06-04 07:37:37] 2025-06-04 05:34:55,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:37:37] 2025-06-04 05:34:55,522 | INFO     | aborting loop
[2025-06-04 07:37:37] 2025-06-04 05:34:55,530 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:55,619 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:55,845 | INFO     | [payload] control thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:56,242 | INFO     | [data] control thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:56,280 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:56,345 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:56,368 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:56,452 | INFO     | [job] control thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:56,522 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:56,528 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:56,531 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:56,911 | INFO     | [job] validate thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:56,912 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:56,981 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:34:57,299 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:37:37] 2025-06-04 05:34:57,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:37:37] 2025-06-04 05:34:58,304 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:35:01,972 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:37:37] 2025-06-04 05:35:02,861 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23417677973312)>', '<ExcThread(monitor, started 23416967001856)>']
[2025-06-04 07:37:37] 2025-06-04 05:35:03,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:37:37] 2025-06-04 05:35:03,473 | INFO     | [monitor] control thread has ended
[2025-06-04 07:37:37] 2025-06-04 05:35:07,886 | INFO     | all workflow threads have been joined
[2025-06-04 07:37:37] 2025-06-04 05:35:07,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:37:37] 2025-06-04 05:35:07,887 | INFO     | traces error code: 0
[2025-06-04 07:37:37] 2025-06-04 05:35:07,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:37:37] 2025-06-04 05:35:08,054 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:37:37] 2025-06-04 05:35:08,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:37:37] 2025-06-04 05:35:08,060 [wrapper] pilotpid: 3435925
[2025-06-04 07:37:37] 2025-06-04 05:35:08,064 [wrapper] Pilot exit status: 0
[2025-06-04 07:37:37] 2025-06-04 05:35:08,077 [wrapper] pandaids: 6677392569
[2025-06-04 07:37:37] 2025-06-04 05:35:08,156 [wrapper] cleanup supervisor_pilot 3673318 3435926
[2025-06-04 07:37:37] 2025-06-04 05:35:08,160 [wrapper] Test setup, not cleaning
[2025-06-04 07:37:37] 2025-06-04 05:35:08,163 [wrapper] apfmon messages muted
[2025-06-04 07:37:37] 2025-06-04 05:35:08,167 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:37:37] 2025-06-04 05:35:08,171 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:37:37]  *** Error codes and diagnostics ***
[2025-06-04 07:37:37]     "exeErrorCode": 0,
[2025-06-04 07:37:37]     "exeErrorDiag": "",
[2025-06-04 07:37:37]     "pilotErrorCode": 0,
[2025-06-04 07:37:37]     "pilotErrorDiag": "",
[2025-06-04 07:37:37]  *** Listing of results directory ***
[2025-06-04 07:37:37] total 390236
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc      5111 Jun  2 20:45 queuedata.json
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc    495897 Jun  2 20:47 pilot3.tar.gz
[2025-06-04 07:37:37] -rwx------ 1 boinc boinc     37140 Jun  2 20:47 runpilot2-wrapper.sh
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc       100 Jun  4 04:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:37:37] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 04:53 run_atlas
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc       105 Jun  4 04:53 job.xml
[2025-06-04 07:37:37] -rw-r--r-- 2 boinc boinc 213432789 Jun  4 04:53 EVNT.45006593._000321.pool.root.1
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc      6635 Jun  4 04:53 init_data.xml
[2025-06-04 07:37:37] -rw-r--r-- 2 boinc boinc     15093 Jun  4 04:53 start_atlas.sh
[2025-06-04 07:37:37] drwxrwx--x 2 boinc boinc      4096 Jun  4 04:53 shared
[2025-06-04 07:37:37] -rw-r--r-- 2 boinc boinc    508875 Jun  4 04:53 input.tar.gz
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc         0 Jun  4 04:53 boinc_lockfile
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc      2521 Jun  4 04:53 pandaJob.out
[2025-06-04 07:37:37] -rw------- 1 boinc boinc    986077 Jun  4 04:54 agis_schedconf.cvmfs.json
[2025-06-04 07:37:37] -rw------- 1 boinc boinc   1603667 Jun  4 04:54 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:37:37] drwx------ 4 boinc boinc      4096 Jun  4 04:54 pilot3
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc       528 Jun  4 07:34 boinc_task_state.xml
[2025-06-04 07:37:37] -rw------- 1 boinc boinc 179928663 Jun  4 07:34 HITS.45006595._008017.pool.root.1
[2025-06-04 07:37:37] -rw------- 1 boinc boinc        95 Jun  4 07:34 pilot_heartbeat.json
[2025-06-04 07:37:37] -rw------- 1 boinc boinc      1034 Jun  4 07:34 memory_monitor_summary.json
[2025-06-04 07:37:37] -rw------- 1 boinc boinc    295446 Jun  4 07:34 log.45006595._008017.job.log.tgz.1
[2025-06-04 07:37:37] -rw------- 1 boinc boinc      7721 Jun  4 07:34 heartbeat.json
[2025-06-04 07:37:37] -rw------- 1 boinc boinc      4363 Jun  4 07:35 pilotlog.txt
[2025-06-04 07:37:37] -rw------- 1 boinc boinc    908268 Jun  4 07:35 log.45006595._008017.job.log.1
[2025-06-04 07:37:37] -rw------- 1 boinc boinc       357 Jun  4 07:35 output.list
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc       620 Jun  4 07:35 runtime_log
[2025-06-04 07:37:37] -rw------- 1 boinc boinc   1218560 Jun  4 07:35 result.tar.gz
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc      9025 Jun  4 07:35 runtime_log.err
[2025-06-04 07:37:37] -rw------- 1 boinc boinc       664 Jun  4 07:35 KmfKDmTNPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmY5fKDmrtft8n.diag
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc        26 Jun  4 07:37 wrapper_checkpoint.txt
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc      8192 Jun  4 07:37 boinc_mmap_file
[2025-06-04 07:37:37] -rw-r--r-- 1 boinc boinc     20964 Jun  4 07:37 stderr.txt
[2025-06-04 07:37:37] HITS file was successfully produced:
[2025-06-04 07:37:37] -rw------- 1 boinc boinc 179928663 Jun  4 07:34 shared/HITS.pool.root.1
[2025-06-04 07:37:37]  *** Contents of shared directory: ***
[2025-06-04 07:37:37] total 385860
[2025-06-04 07:37:37] -rw-r--r-- 2 boinc boinc 213432789 Jun  4 04:53 ATLAS.root_0
[2025-06-04 07:37:37] -rw-r--r-- 2 boinc boinc     15093 Jun  4 04:53 start_atlas.sh
[2025-06-04 07:37:37] -rw-r--r-- 2 boinc boinc    508875 Jun  4 04:53 input.tar.gz
[2025-06-04 07:37:37] -rw------- 1 boinc boinc 179928663 Jun  4 07:34 HITS.pool.root.1
[2025-06-04 07:37:37] -rw------- 1 boinc boinc   1218560 Jun  4 07:35 result.tar.gz
07:37:39 (3432248): run_atlas exited; CPU time 36951.043372
07:37:39 (3432248): called boinc_finish(0)

</stderr_txt>
]]>

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