Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:14:41 (1677466): wrapper (7.7.26015): starting
17:14:41 (1677466): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 17:14:41] Arguments: --nthreads 8
[2025-06-02 17:14:41] Threads: 8
[2025-06-02 17:14:41] Checking for CVMFS
[2025-06-02 17:14:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 17:14:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 17:14:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 17:14:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 17:14:41] 2.12.6.0 8406 34959 249548 146718 3 638 26101794 32935937 17598 16776704 1 291877687 99.625 282515506 22670 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-02 17:14:41] CVMFS is ok
[2025-06-02 17:14:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 17:14:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 17:14:41] Further information can be found at the LHC@home message board.
[2025-06-02 17:14:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 17:14:41] Checking for apptainer binary...
[2025-06-02 17:14:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 17:14:41] Running /usr/bin/apptainer --version
[2025-06-02 17:14:41] apptainer version 1.4.1-1.el9
[2025-06-02 17:14:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 17:14:41] c7-16-9.aglt2.org
[2025-06-02 17:14:41] apptainer works
[2025-06-02 17:14:41] Set ATHENA_PROC_NUMBER=8
[2025-06-02 17:14:41] Set ATHENA_CORE_NUMBER=8
[2025-06-02 17:14:41] Starting ATLAS job with PandaID=6677386654
[2025-06-02 17:14:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 18:27:54]  *** The last 200 lines of the pilot log: ***
[2025-06-02 18:27:54]  direct_access_wan=False
[2025-06-02 18:27:54]  domain=
[2025-06-02 18:27:54]  filesize=309249
[2025-06-02 18:27:54]  filetype=log
[2025-06-02 18:27:54]  guid=65fa75a7-9ecc-410a-aafc-eecc373f98f7
[2025-06-02 18:27:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-02 18:27:54]  is_altstaged=None
[2025-06-02 18:27:54]  is_tar=False
[2025-06-02 18:27:54]  lfn=log.45006595._005096.job.log.tgz.1
[2025-06-02 18:27:54]  mtime=0
[2025-06-02 18:27:54]  protocol_id=None
[2025-06-02 18:27:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-02 18:27:54]  replicas=None
[2025-06-02 18:27:54]  scope=mc23_13p6TeV
[2025-06-02 18:27:54]  status=None
[2025-06-02 18:27:54]  status_code=0
[2025-06-02 18:27:54]  storage_token=
[2025-06-02 18:27:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677386654/log.45006595._005096.job.log.tgz.1
[2025-06-02 18:27:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/31/log.45006595._005096.job.log.tgz.1
[2025-06-02 18:27:54]  workdir=None
[2025-06-02 18:27:54] ]
[2025-06-02 18:27:54] 2025-06-02 22:27:30,960 | INFO     | transferring file log.45006595._005096.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677386654/log.45006595._005096.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-02 18:27:54] 2025-06-02 22:27:30,960 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677386654/log.45006595._005096.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._005096.job
[2025-06-02 18:27:54] 2025-06-02 22:27:30,980 | INFO     | adding to output.list: log.45006595._005096.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/31/log.45006595._005096.job.log.tg
[2025-06-02 18:27:54] 2025-06-02 22:27:30,980 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-02 18:27:54] 2025-06-02 22:27:30,981 | INFO     | summary of transferred files:
[2025-06-02 18:27:54] 2025-06-02 22:27:30,981 | INFO     |  -- lfn=log.45006595._005096.job.log.tgz.1, status_code=0, status=transferred
[2025-06-02 18:27:54] 2025-06-02 22:27:30,981 | INFO     | stage-out finished correctly
[2025-06-02 18:27:54] 2025-06-02 22:27:31,062 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-02 18:27:54] 2025-06-02 22:27:31,141 | INFO     | job 6677386654 has state=finished
[2025-06-02 18:27:54] 2025-06-02 22:27:31,141 | INFO     | preparing for final server update for job 6677386654 in state='finished'
[2025-06-02 18:27:54] 2025-06-02 22:27:31,142 | INFO     | this job has now completed (state=finished)
[2025-06-02 18:27:54] 2025-06-02 22:27:31,142 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-02 18:27:54] 2025-06-02 22:27:31,142 | INFO     | log transfer has been attempted: DONE
[2025-06-02 18:27:54] 2025-06-02 22:27:31,142 | INFO     | job 6677386654 has finished - writing final server update
[2025-06-02 18:27:54] 2025-06-02 22:27:31,142 | INFO     | total number of processed events: 400 (read)
[2025-06-02 18:27:54] 2025-06-02 22:27:31,159 | INFO     | executing command: lscpu
[2025-06-02 18:27:54] 2025-06-02 22:27:31,249 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-02 18:27:54] 2025-06-02 22:27:33,287 | INFO     | monitor loop #309: job 0:6677386654 is in state 'finished'
[2025-06-02 18:27:54] 2025-06-02 22:27:33,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 18:27:54] 2025-06-02 22:27:35,378 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-02 18:27:54] 2025-06-02 22:27:35,378 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677386654/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 18:27:54] 2025-06-02 22:27:35,379 | INFO     | extracted standard info from prmon json
[2025-06-02 18:27:54] 2025-06-02 22:27:35,379 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 18:27:54] 2025-06-02 22:27:35,379 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 18:27:54] 2025-06-02 22:27:35,379 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 18:27:54] 2025-06-02 22:27:35,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 18:27:54] 2025-06-02 22:27:35,380 | INFO     | fitting pss+swap vs Time
[2025-06-02 18:27:54] 2025-06-02 22:27:35,381 | INFO     | sum of square deviations: 81266640.0
[2025-06-02 18:27:54] 2025-06-02 22:27:35,381 | INFO     | sum of deviations: -1827157339.0
[2025-06-02 18:27:54] 2025-06-02 22:27:35,381 | INFO     | mean x: 1748901153.5
[2025-06-02 18:27:54] 2025-06-02 22:27:35,381 | INFO     | mean y: 2315611.0625
[2025-06-02 18:27:54] 2025-06-02 22:27:35,381 | INFO     | -- intersect: 39323709700.97553
[2025-06-02 18:27:54] 2025-06-02 22:27:35,381 | INFO     | intersect: 39323709700.97553
[2025-06-02 18:27:54] 2025-06-02 22:27:35,381 | INFO     | chi2: 0.034159743648976414
[2025-06-02 18:27:54] 2025-06-02 22:27:35,381 | INFO     | -- intersect: 39323709700.97553
[2025-06-02 18:27:54] 2025-06-02 22:27:35,381 | INFO     | current memory leak: -22.48 B/s (using 64 data points, chi2=0.03)
[2025-06-02 18:27:54] 2025-06-02 22:27:35,382 | INFO     | ..............................
[2025-06-02 18:27:54] 2025-06-02 22:27:35,382 | INFO     | . Timing measurements:
[2025-06-02 18:27:54] 2025-06-02 22:27:35,382 | INFO     | . get job = 0 s
[2025-06-02 18:27:54] 2025-06-02 22:27:35,382 | INFO     | . initial setup = 2 s
[2025-06-02 18:27:54] 2025-06-02 22:27:35,382 | INFO     | . payload setup = 9 s
[2025-06-02 18:27:54] 2025-06-02 22:27:35,382 | INFO     | . stage-in = 0 s
[2025-06-02 18:27:54] 2025-06-02 22:27:35,382 | INFO     | . payload execution = 4325 s
[2025-06-02 18:27:54] 2025-06-02 22:27:35,382 | INFO     | . stage-out = 0 s
[2025-06-02 18:27:54] 2025-06-02 22:27:35,382 | INFO     | . log creation = 0 s
[2025-06-02 18:27:54] 2025-06-02 22:27:35,382 | INFO     | ..............................
[2025-06-02 18:27:54] 2025-06-02 22:27:35,561 | INFO     | 
[2025-06-02 18:27:54] 2025-06-02 22:27:35,561 | INFO     | job summary report
[2025-06-02 18:27:54] 2025-06-02 22:27:35,561 | INFO     | --------------------------------------------------
[2025-06-02 18:27:54] 2025-06-02 22:27:35,561 | INFO     | PanDA job id: 6677386654
[2025-06-02 18:27:54] 2025-06-02 22:27:35,561 | INFO     | task id: 45006595
[2025-06-02 18:27:54] 2025-06-02 22:27:35,561 | INFO     | errors: (none)
[2025-06-02 18:27:54] 2025-06-02 22:27:35,561 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 18:27:54] 2025-06-02 22:27:35,561 | INFO     | pilot state: finished 
[2025-06-02 18:27:54] 2025-06-02 22:27:35,561 | INFO     | transexitcode: 0
[2025-06-02 18:27:54] 2025-06-02 22:27:35,561 | INFO     | exeerrorcode: 0
[2025-06-02 18:27:54] 2025-06-02 22:27:35,561 | INFO     | exeerrordiag: 
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | exitcode: 0
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | exitmsg: OK
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | cpuconsumptiontime: 28753 s
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | nevents: 400
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | neventsw: 0
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | pid: 1689561
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | pgrp: 1689561
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | corecount: 8
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | event service: False
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | sizes: {0: 2405177, 6: 2405383, 11: 2405411, 4338: 2431274, 4339: 2440271, 4343: 2440385}
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | --------------------------------------------------
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | 
[2025-06-02 18:27:54] 2025-06-02 22:27:35,562 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-02 18:27:54] 2025-06-02 22:27:35,588 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 18:27:54] 2025-06-02 22:27:35,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 18:27:54] 2025-06-02 22:27:35,590 | INFO     | job 6677386654 has completed (purged errors)
[2025-06-02 18:27:54] 2025-06-02 22:27:35,590 | INFO     | overall cleanup function is called
[2025-06-02 18:27:54] 2025-06-02 22:27:36,599 | INFO     | --- collectZombieJob: --- 10, [1689561]
[2025-06-02 18:27:54] 2025-06-02 22:27:36,599 | INFO     | zombie collector waiting for pid 1689561
[2025-06-02 18:27:54] 2025-06-02 22:27:36,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 18:27:54] 2025-06-02 22:27:36,599 | INFO     | collected zombie processes
[2025-06-02 18:27:54] 2025-06-02 22:27:36,599 | INFO     | will attempt to kill all subprocesses of pid=1689561
[2025-06-02 18:27:54] 2025-06-02 22:27:37,049 | INFO     | process IDs to be killed: [1689561] (in reverse order)
[2025-06-02 18:27:54] 2025-06-02 22:27:37,198 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 18:27:54] 2025-06-02 22:27:37,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 18:27:54] 2025-06-02 22:27:37,216 | INFO     | did not find any defunct processes belonging to 1689561
[2025-06-02 18:27:54] 2025-06-02 22:27:37,235 | INFO     | did not find any defunct processes belonging to 1689561
[2025-06-02 18:27:54] 2025-06-02 22:27:37,235 | INFO     | ready for new job
[2025-06-02 18:27:54] 2025-06-02 22:27:37,235 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 18:27:54] 2025-06-02 22:27:37,237 | INFO     | **************************************
[2025-06-02 18:27:54] 2025-06-02 22:27:37,237 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 18:27:54] 2025-06-02 22:27:37,237 | INFO     | **************************************
[2025-06-02 18:27:54] 2025-06-02 22:27:37,237 | INFO     | 
[2025-06-02 18:27:54] 2025-06-02 22:27:37,255 | INFO     | architecture information:
[2025-06-02 18:27:54] 2025-06-02 22:27:37,255 | INFO     | executing command: cat /etc/os-release
[2025-06-02 18:27:54] 2025-06-02 22:27:37,268 | INFO     | cat /etc/os-release:
[2025-06-02 18:27:54] NAME="CentOS Linux"
[2025-06-02 18:27:54] VERSION="7 (Core)"
[2025-06-02 18:27:54] ID="centos"
[2025-06-02 18:27:54] ID_LIKE="rhel fedora"
[2025-06-02 18:27:54] VERSION_ID="7"
[2025-06-02 18:27:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 18:27:54] ANSI_COLOR="0;31"
[2025-06-02 18:27:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 18:27:54] HOME_URL="https://www.centos.org/"
[2025-06-02 18:27:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 18:27:54] 
[2025-06-02 18:27:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 18:27:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 18:27:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 18:27:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 18:27:54] 
[2025-06-02 18:27:54] 2025-06-02 22:27:37,268 | INFO     | **************************************
[2025-06-02 18:27:54] 2025-06-02 22:27:37,773 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-02 18:27:54] 2025-06-02 22:27:37,789 | INFO     | sufficient remaining disk space (75371642880 B)
[2025-06-02 18:27:54] 2025-06-02 22:27:37,789 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 18:27:54] 2025-06-02 22:27:37,789 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 18:27:54] 2025-06-02 22:27:37,789 | INFO     | update_server=False
[2025-06-02 18:27:54] 2025-06-02 22:27:37,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 18:27:54] 2025-06-02 22:27:37,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 18:27:54] 2025-06-02 22:27:37,790 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 18:27:54] 2025-06-02 22:27:37,790 | INFO     | aborting loop
[2025-06-02 18:27:54] 2025-06-02 22:27:37,899 | INFO     | all payload control threads have been joined
[2025-06-02 18:27:54] 2025-06-02 22:27:38,131 | INFO     | all job control threads have been joined
[2025-06-02 18:27:54] 2025-06-02 22:27:38,400 | INFO     | all data control threads have been joined
[2025-06-02 18:27:54] 2025-06-02 22:27:38,467 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 18:27:54] 2025-06-02 22:27:38,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 18:27:54] 2025-06-02 22:27:38,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 18:27:54] 2025-06-02 22:27:38,795 | INFO     | [job] job monitor thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:38,795 | INFO     | [job] retrieve thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:38,858 | INFO     | [data] copytool_in thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:38,904 | INFO     | [payload] control thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:39,075 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 18:27:54] 2025-06-02 22:27:39,137 | INFO     | [job] control thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:39,256 | INFO     | [payload] validate_post thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:39,405 | INFO     | [data] control thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:39,783 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:39,805 | INFO     | [job] validate thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:40,165 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:40,230 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:40,357 | INFO     | [payload] failed_post thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:40,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 18:27:54] 2025-06-02 22:27:41,079 | INFO     | [data] copytool_out thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:41,474 | INFO     | [job] queue monitor thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:41,796 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:48,024 | INFO     | job.realtimelogging is not enabled
[2025-06-02 18:27:54] 2025-06-02 22:27:49,029 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 18:27:54] 2025-06-02 22:27:49,440 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140702183929664)>', '<ExcThread(monitor, started 140701685757696)>']
[2025-06-02 18:27:54] 2025-06-02 22:27:49,529 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 18:27:54] 2025-06-02 22:27:49,529 | INFO     | [monitor] control thread has ended
[2025-06-02 18:27:54] 2025-06-02 22:27:54,465 | INFO     | all workflow threads have been joined
[2025-06-02 18:27:54] 2025-06-02 22:27:54,465 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 18:27:54] 2025-06-02 22:27:54,465 | INFO     | traces error code: 0
[2025-06-02 18:27:54] 2025-06-02 22:27:54,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 18:27:54] 2025-06-02 22:27:54,566 [wrapper] ==== pilot stdout END ====
[2025-06-02 18:27:54] 2025-06-02 22:27:54,570 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 18:27:54] 2025-06-02 22:27:54,573 [wrapper] pilotpid: 1681622
[2025-06-02 18:27:54] 2025-06-02 22:27:54,577 [wrapper] Pilot exit status: 0
[2025-06-02 18:27:54] 2025-06-02 22:27:54,589 [wrapper] pandaids: 6677386654
[2025-06-02 18:27:54] 2025-06-02 22:27:54,669 [wrapper] cleanup supervisor_pilot 2060419 1681623
[2025-06-02 18:27:54] 2025-06-02 22:27:54,672 [wrapper] Test setup, not cleaning
[2025-06-02 18:27:54] 2025-06-02 22:27:54,677 [wrapper] apfmon messages muted
[2025-06-02 18:27:54] 2025-06-02 22:27:54,679 [wrapper] ==== wrapper stdout END ====
[2025-06-02 18:27:54] 2025-06-02 22:27:54,683 [wrapper] ==== wrapper stderr END ====
[2025-06-02 18:27:54]  *** Error codes and diagnostics ***
[2025-06-02 18:27:54]     "exeErrorCode": 0,
[2025-06-02 18:27:54]     "exeErrorDiag": "",
[2025-06-02 18:27:54]     "pilotErrorCode": 0,
[2025-06-02 18:27:54]     "pilotErrorDiag": "",
[2025-06-02 18:27:54]  *** Listing of results directory ***
[2025-06-02 18:27:54] total 387316
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 13:07 pilot3.tar.gz
[2025-06-02 18:27:54] -rwx------. 1 boincer umatlas     37140 Jun  2 13:09 runpilot2-wrapper.sh
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 13:10 queuedata.json
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas       100 Jun  2 17:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 18:27:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  2 17:14 run_atlas
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas       105 Jun  2 17:14 job.xml
[2025-06-02 18:27:54] -rw-r--r--. 2 boincer umatlas 216043607 Jun  2 17:14 EVNT.45006593._000204.pool.root.1
[2025-06-02 18:27:54] drwxrwx--x. 2 boincer umatlas      4096 Jun  2 17:14 shared
[2025-06-02 18:27:54] -rw-r--r--. 2 boincer umatlas    508874 Jun  2 17:14 input.tar.gz
[2025-06-02 18:27:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 17:14 start_atlas.sh
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas         0 Jun  2 17:14 boinc_lockfile
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas      2521 Jun  2 17:14 pandaJob.out
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas    987975 Jun  2 17:14 agis_schedconf.cvmfs.json
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas   1603667 Jun  2 17:14 agis_ddmendpoints.agis.ALL.json
[2025-06-02 18:27:54] drwx------. 4 boincer umatlas      4096 Jun  2 17:14 pilot3
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas      6933 Jun  2 18:19 init_data.xml
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas 175251461 Jun  2 18:27 HITS.45006595._005096.pool.root.1
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas       529 Jun  2 18:27 boinc_task_state.xml
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas        95 Jun  2 18:27 pilot_heartbeat.json
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas      1030 Jun  2 18:27 memory_monitor_summary.json
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas    309249 Jun  2 18:27 log.45006595._005096.job.log.tgz.1
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas      7681 Jun  2 18:27 heartbeat.json
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas      8192 Jun  2 18:27 boinc_mmap_file
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas        27 Jun  2 18:27 wrapper_checkpoint.txt
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas      4425 Jun  2 18:27 pilotlog.txt
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas    424634 Jun  2 18:27 log.45006595._005096.job.log.1
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas       357 Jun  2 18:27 output.list
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas       620 Jun  2 18:27 runtime_log
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas    757760 Jun  2 18:27 result.tar.gz
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas       652 Jun  2 18:27 ur9LDmcqNg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhtVKDmeji4pn.diag
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas      8654 Jun  2 18:27 runtime_log.err
[2025-06-02 18:27:54] -rw-r--r--. 1 boincer umatlas     20897 Jun  2 18:27 stderr.txt
[2025-06-02 18:27:54] HITS file was successfully produced:
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas 175251461 Jun  2 18:27 shared/HITS.pool.root.1
[2025-06-02 18:27:54]  *** Contents of shared directory: ***
[2025-06-02 18:27:54] total 383396
[2025-06-02 18:27:54] -rw-r--r--. 2 boincer umatlas 216043607 Jun  2 17:14 ATLAS.root_0
[2025-06-02 18:27:54] -rw-r--r--. 2 boincer umatlas    508874 Jun  2 17:14 input.tar.gz
[2025-06-02 18:27:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 17:14 start_atlas.sh
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas 175251461 Jun  2 18:27 HITS.pool.root.1
[2025-06-02 18:27:54] -rw-------. 1 boincer umatlas    757760 Jun  2 18:27 result.tar.gz
18:27:56 (1677466): run_atlas exited; CPU time 28890.938498
18:27:56 (1677466): called boinc_finish(0)

</stderr_txt>
]]>

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