Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:42:56 (22513): wrapper (7.7.26015): starting
07:42:56 (22513): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:42:56] Arguments: --nthreads 8
[2025-06-03 07:42:56] Threads: 8
[2025-06-03 07:42:56] Checking for CVMFS
[2025-06-03 07:42:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:42:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:42:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:42:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:42:57] 2.11.2.0 6477 31378 93840 146729 3 210 21560125 25165824 4353 130560 0 15871266 99.844 17246224 1844 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 07:42:57] CVMFS is ok
[2025-06-03 07:42:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:42:57] Checking for apptainer binary...
[2025-06-03 07:42:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:42:57] Running /usr/bin/apptainer --version
[2025-06-03 07:42:57] apptainer version 1.3.2-1.el7
[2025-06-03 07:42:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:42:59] cg-vwn261.simple-grid.lan
[2025-06-03 07:42:59] apptainer works
[2025-06-03 07:42:59] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:42:59] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:42:59] Starting ATLAS job with PandaID=6677392159
[2025-06-03 07:42:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:49:48]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:49:48] 2025-06-03 09:18:11,589 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:49:48] 2025-06-03 09:18:11,589 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:49:48] 2025-06-03 09:18:11,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:49:48] 2025-06-03 09:18:11,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:49:48] 2025-06-03 09:18:11,595 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:49:48] 2025-06-03 09:18:11,596 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,597 | INFO     | sum of deviations: -11432861072.000004
[2025-06-03 11:49:48] 2025-06-03 09:18:11,598 | INFO     | mean x: 1748935817.0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,598 | INFO     | mean y: 2480923.985645933
[2025-06-03 11:49:48] 2025-06-03 09:18:11,598 | INFO     | -- intersect: 7066005462.7878475
[2025-06-03 11:49:48] 2025-06-03 09:18:11,598 | INFO     | intersect: 7066005462.7878475
[2025-06-03 11:49:48] 2025-06-03 09:18:11,598 | INFO     | chi2: 2.7767580997636707
[2025-06-03 11:49:48] 2025-06-03 09:18:11,599 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,601 | INFO     | sum of deviations: 2595431080.500004
[2025-06-03 11:49:48] 2025-06-03 09:18:11,601 | INFO     | mean x: 1748935664.5
[2025-06-03 11:49:48] 2025-06-03 09:18:11,601 | INFO     | mean y: 2491504.7107843137
[2025-06-03 11:49:48] 2025-06-03 09:18:11,601 | INFO     | -- intersect: -1721856205.6260529
[2025-06-03 11:49:48] 2025-06-03 09:18:11,601 | INFO     | intersect: -1721856205.6260529
[2025-06-03 11:49:48] 2025-06-03 09:18:11,602 | INFO     | chi2: 2.0115317397796946
[2025-06-03 11:49:48] 2025-06-03 09:18:11,602 | INFO     | current chi2=2.0115317397796946 (change=27.558265159975743 %)
[2025-06-03 11:49:48] 2025-06-03 09:18:11,602 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,604 | INFO     | sum of deviations: 2634960941.0000014
[2025-06-03 11:49:48] 2025-06-03 09:18:11,604 | INFO     | mean x: 1748935512.0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,604 | INFO     | mean y: 2491536.638190955
[2025-06-03 11:49:48] 2025-06-03 09:18:11,604 | INFO     | -- intersect: -1883419889.3473878
[2025-06-03 11:49:48] 2025-06-03 09:18:11,604 | INFO     | intersect: -1883419889.3473878
[2025-06-03 11:49:48] 2025-06-03 09:18:11,605 | INFO     | chi2: 2.0120509991659374
[2025-06-03 11:49:48] 2025-06-03 09:18:11,605 | INFO     | current chi2=2.0120509991659374 (change=-0.025814128406431963 %)
[2025-06-03 11:49:48] 2025-06-03 09:18:11,605 | INFO     | right removable region: 198
[2025-06-03 11:49:48] 2025-06-03 09:18:11,605 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,607 | INFO     | sum of deviations: -50061891292.5
[2025-06-03 11:49:48] 2025-06-03 09:18:11,607 | INFO     | mean x: 1748935969.5
[2025-06-03 11:49:48] 2025-06-03 09:18:11,607 | INFO     | mean y: 2510374.2303921566
[2025-06-03 11:49:48] 2025-06-03 09:18:11,607 | INFO     | -- intersect: 33262543101.795044
[2025-06-03 11:49:48] 2025-06-03 09:18:11,607 | INFO     | intersect: 33262543101.795044
[2025-06-03 11:49:48] 2025-06-03 09:18:11,608 | INFO     | chi2: 0.9917357181451967
[2025-06-03 11:49:48] 2025-06-03 09:18:11,608 | INFO     | current chi2=0.9917357181451967 (change=64.28440351971591 %)
[2025-06-03 11:49:48] 2025-06-03 09:18:11,614 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,616 | INFO     | sum of deviations: -48048670015.0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,616 | INFO     | mean x: 1748936122.0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,616 | INFO     | mean y: 2508706.673366834
[2025-06-03 11:49:48] 2025-06-03 09:18:11,616 | INFO     | -- intersect: 34392228106.278946
[2025-06-03 11:49:48] 2025-06-03 09:18:11,617 | INFO     | intersect: 34392228106.278946
[2025-06-03 11:49:48] 2025-06-03 09:18:11,617 | INFO     | chi2: 0.977918994373149
[2025-06-03 11:49:48] 2025-06-03 09:18:11,617 | INFO     | current chi2=0.977918994373149 (change=1.393186059476464 %)
[2025-06-03 11:49:48] 2025-06-03 09:18:11,617 | INFO     | left removable region: 20
[2025-06-03 11:49:48] 2025-06-03 09:18:11,618 | INFO     | sum of square deviations: 1748737904.5
[2025-06-03 11:49:48] 2025-06-03 09:18:11,619 | INFO     | sum of deviations: -20557285358.000008
[2025-06-03 11:49:48] 2025-06-03 09:18:11,619 | INFO     | mean x: 1748936091.5
[2025-06-03 11:49:48] 2025-06-03 09:18:11,619 | INFO     | mean y: 2509536.9775280897
[2025-06-03 11:49:48] 2025-06-03 09:18:11,619 | INFO     | -- intersect: 20562124681.90716
[2025-06-03 11:49:48] 2025-06-03 09:18:11,619 | INFO     | intersect: 20562124681.90716
[2025-06-03 11:49:48] 2025-06-03 09:18:11,620 | INFO     | chi2: 0.15032966037524814
[2025-06-03 11:49:48] 2025-06-03 09:18:11,620 | INFO     | -- intersect: 20562124681.90716
[2025-06-03 11:49:48] 2025-06-03 09:18:11,620 | INFO     | current memory leak: -11.76 B/s (using 178 data points, chi2=0.15)
[2025-06-03 11:49:48] 2025-06-03 09:18:11,621 | INFO     | ..............................
[2025-06-03 11:49:48] 2025-06-03 09:18:11,621 | INFO     | . Timing measurements:
[2025-06-03 11:49:48] 2025-06-03 09:18:11,621 | INFO     | . get job = 0 s
[2025-06-03 11:49:48] 2025-06-03 09:18:11,621 | INFO     | . initial setup = 4 s
[2025-06-03 11:49:48] 2025-06-03 09:18:11,621 | INFO     | . payload setup = 18 s
[2025-06-03 11:49:48] 2025-06-03 09:18:11,621 | INFO     | . stage-in = 0 s
[2025-06-03 11:49:48] 2025-06-03 09:18:11,622 | INFO     | . payload execution = 12751 s
[2025-06-03 11:49:48] 2025-06-03 09:18:11,622 | INFO     | . stage-out = 7 s
[2025-06-03 11:49:48] 2025-06-03 09:18:11,622 | INFO     | . log creation = 0 s
[2025-06-03 11:49:48] 2025-06-03 09:18:11,622 | INFO     | ..............................
[2025-06-03 11:49:48] 2025-06-03 09:18:11,777 | INFO     | 
[2025-06-03 11:49:48] 2025-06-03 09:18:11,778 | INFO     | job summary report
[2025-06-03 11:49:48] 2025-06-03 09:18:11,778 | INFO     | --------------------------------------------------
[2025-06-03 11:49:48] 2025-06-03 09:18:11,778 | INFO     | PanDA job id: 6677392159
[2025-06-03 11:49:48] 2025-06-03 09:18:11,778 | INFO     | task id: 45006595
[2025-06-03 11:49:48] 2025-06-03 09:18:11,778 | INFO     | errors: (none)
[2025-06-03 11:49:48] 2025-06-03 09:18:11,778 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:49:48] 2025-06-03 09:18:11,778 | INFO     | pilot state: finished 
[2025-06-03 11:49:48] 2025-06-03 09:18:11,778 | INFO     | transexitcode: 0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,778 | INFO     | exeerrorcode: 0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,778 | INFO     | exeerrordiag: 
[2025-06-03 11:49:48] 2025-06-03 09:18:11,778 | INFO     | exitcode: 0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,779 | INFO     | exitmsg: OK
[2025-06-03 11:49:48] 2025-06-03 09:18:11,779 | INFO     | cpuconsumptiontime: 48192 s
[2025-06-03 11:49:48] 2025-06-03 09:18:11,779 | INFO     | nevents: 400
[2025-06-03 11:49:48] 2025-06-03 09:18:11,779 | INFO     | neventsw: 0
[2025-06-03 11:49:48] 2025-06-03 09:18:11,779 | INFO     | pid: 2404
[2025-06-03 11:49:48] 2025-06-03 09:18:11,779 | INFO     | pgrp: 2404
[2025-06-03 11:49:48] 2025-06-03 09:18:11,779 | INFO     | corecount: 8
[2025-06-03 11:49:48] 2025-06-03 09:18:11,779 | INFO     | event service: False
[2025-06-03 11:49:48] 2025-06-03 09:18:11,779 | INFO     | sizes: {0: 2405006, 1: 2405205, 10: 2405411, 12: 2405439, 12774: 2434618, 12782: 2443559, 12785: 2443743, 12867: 2443913}
[2025-06-03 11:49:48] 2025-06-03 09:18:11,779 | INFO     | --------------------------------------------------
[2025-06-03 11:49:48] 2025-06-03 09:18:11,779 | INFO     | 
[2025-06-03 11:49:48] 2025-06-03 09:18:11,780 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 11:49:48] 2025-06-03 09:18:12,447 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,447 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,447 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,447 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,449 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:49:48] 2025-06-03 09:18:12,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,449 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:49:48] 2025-06-03 09:18:12,449 | INFO     | job 6677392159 has completed (purged errors)
[2025-06-03 11:49:48] 2025-06-03 09:18:12,449 | INFO     | overall cleanup function is called
[2025-06-03 11:49:48] 2025-06-03 09:18:13,458 | INFO     | --- collectZombieJob: --- 10, [2404]
[2025-06-03 11:49:48] 2025-06-03 09:18:13,459 | INFO     | zombie collector waiting for pid 2404
[2025-06-03 11:49:48] 2025-06-03 09:18:13,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:49:48] 2025-06-03 09:18:13,459 | INFO     | collected zombie processes
[2025-06-03 11:49:48] 2025-06-03 09:18:13,459 | INFO     | will attempt to kill all subprocesses of pid=2404
[2025-06-03 11:49:48] 2025-06-03 09:18:13,582 | INFO     | process IDs to be killed: [2404] (in reverse order)
[2025-06-03 11:49:48] 2025-06-03 09:18:14,522 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:49:48] 2025-06-03 09:18:14,523 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:49:48] 2025-06-03 09:18:14,526 | INFO     | did not find any defunct processes belonging to 2404
[2025-06-03 11:49:48] 2025-06-03 09:18:14,529 | INFO     | did not find any defunct processes belonging to 2404
[2025-06-03 11:49:48] 2025-06-03 09:18:14,529 | INFO     | ready for new job
[2025-06-03 11:49:48] 2025-06-03 09:18:14,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:49:48] 2025-06-03 09:18:14,531 | INFO     | **************************************
[2025-06-03 11:49:48] 2025-06-03 09:18:14,532 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:49:48] 2025-06-03 09:18:14,532 | INFO     | **************************************
[2025-06-03 11:49:48] 2025-06-03 09:18:14,532 | INFO     | 
[2025-06-03 11:49:48] 2025-06-03 09:18:14,532 | INFO     | pilot is running in a VM
[2025-06-03 11:49:48] 2025-06-03 09:18:14,532 | INFO     | architecture information:
[2025-06-03 11:49:48] 2025-06-03 09:18:14,536 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:49:48] 2025-06-03 09:18:14,720 | INFO     | cat /etc/os-release:
[2025-06-03 11:49:48] NAME="CentOS Linux"
[2025-06-03 11:49:48] VERSION="7 (Core)"
[2025-06-03 11:49:48] ID="centos"
[2025-06-03 11:49:48] ID_LIKE="rhel fedora"
[2025-06-03 11:49:48] VERSION_ID="7"
[2025-06-03 11:49:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:49:48] ANSI_COLOR="0;31"
[2025-06-03 11:49:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:49:48] HOME_URL="https://www.centos.org/"
[2025-06-03 11:49:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:49:48] 
[2025-06-03 11:49:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:49:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:49:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:49:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:49:48] 
[2025-06-03 11:49:48] 2025-06-03 09:18:14,720 | INFO     | **************************************
[2025-06-03 11:49:48] 2025-06-03 09:18:15,224 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 11:49:48] 2025-06-03 09:18:15,418 | INFO     | sufficient remaining disk space (496943235072 B)
[2025-06-03 11:49:48] 2025-06-03 09:18:15,418 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:49:48] 2025-06-03 09:18:15,419 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:49:48] 2025-06-03 09:18:15,419 | INFO     | update_server=False
[2025-06-03 11:49:48] 2025-06-03 09:18:15,419 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:49:48] 2025-06-03 09:18:15,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:49:48] 2025-06-03 09:18:15,549 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:49:48] 2025-06-03 09:18:15,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:49:48] 2025-06-03 09:18:15,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:49:48] 2025-06-03 09:18:15,731 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 11:49:48] 2025-06-03 09:18:15,732 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 11:49:48] 2025-06-03 09:18:15,732 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:49:48] 2025-06-03 09:18:15,732 | INFO     | will abort loop
[2025-06-03 11:49:48] 2025-06-03 09:18:15,809 | INFO     | all payload control threads have been joined
[2025-06-03 11:49:48] 2025-06-03 09:18:15,858 | INFO     | all data control threads have been joined
[2025-06-03 11:49:48] 2025-06-03 09:18:16,424 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:16,475 | INFO     | [job] validate thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:16,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:49:48] 2025-06-03 09:18:16,737 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:16,791 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:49:48] 2025-06-03 09:18:16,815 | INFO     | [payload] control thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:16,864 | INFO     | [data] control thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:16,866 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:17,018 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:17,100 | INFO     | all job control threads have been joined
[2025-06-03 11:49:48] 2025-06-03 09:18:17,105 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:17,199 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:17,427 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:17,560 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:17,723 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:17,727 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:17,797 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:18,106 | INFO     | [job] control thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:20,714 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:49:48] 2025-06-03 09:18:21,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139646904178496)>', '<ExcThread(monitor, started 139646457587456)>']
[2025-06-03 11:49:48] 2025-06-03 09:18:21,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:49:48] 2025-06-03 09:18:21,585 | INFO     | [monitor] control thread has ended
[2025-06-03 11:49:48] 2025-06-03 09:18:26,222 | INFO     | all workflow threads have been joined
[2025-06-03 11:49:48] 2025-06-03 09:18:26,223 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:49:48] 2025-06-03 09:18:26,223 | INFO     | traces error code: 0
[2025-06-03 11:49:48] 2025-06-03 09:18:26,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:49:48] 2025-06-03 09:18:26,637 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:49:48] 2025-06-03 09:18:26,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:49:48] 2025-06-03 09:18:26,758 [wrapper] pilotpid: 26186
[2025-06-03 11:49:48] 2025-06-03 09:18:26,813 [wrapper] Pilot exit status: 0
[2025-06-03 11:49:48] 2025-06-03 09:18:27,331 [wrapper] pandaids: 6677392159
[2025-06-03 11:49:48] 2025-06-03 09:18:28,301 [wrapper] cleanup supervisor_pilot  3914 26187
[2025-06-03 11:49:48] 2025-06-03 09:18:28,388 [wrapper] Test setup, not cleaning
[2025-06-03 11:49:48] 2025-06-03 09:18:28,462 [wrapper] apfmon messages muted
[2025-06-03 11:49:48] 2025-06-03 09:18:28,571 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:49:48] 2025-06-03 09:18:28,672 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:49:48]  *** Error codes and diagnostics ***
[2025-06-03 11:49:48]     "exeErrorCode": 0,
[2025-06-03 11:49:48]     "exeErrorDiag": "",
[2025-06-03 11:49:48]     "pilotErrorCode": 0,
[2025-06-03 11:49:48]     "pilotErrorDiag": "",
[2025-06-03 11:49:48]  *** Listing of results directory ***
[2025-06-03 11:49:48] total 392008
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:30 pilot3.tar.gz
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:34 queuedata.json
[2025-06-03 11:49:48] -rwx------. 1 boinc boinc     37140 Jun  2 20:36 runpilot2-wrapper.sh
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc       100 Jun  3 07:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:49:48] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 07:42 run_atlas
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc       105 Jun  3 07:42 job.xml
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc      6391 Jun  3 07:42 init_data.xml
[2025-06-03 11:49:48] -rw-r--r--. 2 boinc boinc 218387663 Jun  3 07:42 EVNT.45006593._000306.pool.root.1
[2025-06-03 11:49:48] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:42 start_atlas.sh
[2025-06-03 11:49:48] drwxrwx--x. 2 boinc boinc        68 Jun  3 07:42 shared
[2025-06-03 11:49:48] -rw-r--r--. 2 boinc boinc    508881 Jun  3 07:42 input.tar.gz
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc         0 Jun  3 07:42 boinc_lockfile
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc      2521 Jun  3 07:42 pandaJob.out
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc    988073 Jun  3 07:43 agis_schedconf.cvmfs.json
[2025-06-03 11:49:48] drwx------. 4 boinc boinc      4096 Jun  3 07:43 pilot3
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc 176212128 Jun  3 11:15 HITS.45006595._007647.pool.root.1
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc       531 Jun  3 11:15 boinc_task_state.xml
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc      1018 Jun  3 11:16 memory_monitor_summary.json
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc   1603667 Jun  3 11:16 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc    384234 Jun  3 11:16 log.45006595._007647.job.log.tgz.1
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc        95 Jun  3 11:17 pilot_heartbeat.json
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc      7687 Jun  3 11:18 heartbeat.json
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc      4602 Jun  3 11:18 pilotlog.txt
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc   1115822 Jun  3 11:18 log.45006595._007647.job.log.1
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc       357 Jun  3 11:18 output.list
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc       620 Jun  3 11:18 runtime_log
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc   1515520 Jun  3 11:18 result.tar.gz
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc      8659 Jun  3 11:18 runtime_log.err
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc       656 Jun  3 11:18 n7GODmWCPg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKEWKDmBmFbJo.diag
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc      8192 Jun  3 11:49 boinc_mmap_file
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc        28 Jun  3 11:49 wrapper_checkpoint.txt
[2025-06-03 11:49:48] -rw-r--r--. 1 boinc boinc     20459 Jun  3 11:49 stderr.txt
[2025-06-03 11:49:48] HITS file was successfully produced:
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc 176212128 Jun  3 11:15 shared/HITS.pool.root.1
[2025-06-03 11:49:48]  *** Contents of shared directory: ***
[2025-06-03 11:49:48] total 387352
[2025-06-03 11:49:48] -rw-r--r--. 2 boinc boinc 218387663 Jun  3 07:42 ATLAS.root_0
[2025-06-03 11:49:48] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:42 start_atlas.sh
[2025-06-03 11:49:48] -rw-r--r--. 2 boinc boinc    508881 Jun  3 07:42 input.tar.gz
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc 176212128 Jun  3 11:15 HITS.pool.root.1
[2025-06-03 11:49:48] -rw-------. 1 boinc boinc   1515520 Jun  3 11:18 result.tar.gz
11:49:50 (22513): run_atlas exited; CPU time 48354.359484
11:49:50 (22513): called boinc_finish(0)

</stderr_txt>
]]>

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