Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:44:25 (27004): wrapper (7.7.26015): starting
06:44:25 (27004): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:44:25] Arguments: --nthreads 8
[2025-06-03 06:44:25] Threads: 8
[2025-06-03 06:44:25] Checking for CVMFS
[2025-06-03 06:44:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:44:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:44:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:44:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:44:28] 2.11.2.0 20954 31446 88600 146729 3 59 16715148 25165825 4635 130560 0 15823840 99.820 17176726 1984 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 06:44:28] CVMFS is ok
[2025-06-03 06:44:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:44:28] Checking for apptainer binary...
[2025-06-03 06:44:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:44:28] Running /usr/bin/apptainer --version
[2025-06-03 06:44:28] apptainer version 1.3.2-1.el7
[2025-06-03 06:44:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:44:37] cg-vwn319.simple-grid.lan
[2025-06-03 06:44:37] apptainer works
[2025-06-03 06:44:37] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:44:37] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:44:38] Starting ATLAS job with PandaID=6677391210
[2025-06-03 06:44:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:36:27]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:36:27] 2025-06-03 08:28:00,962 | INFO     | mean y: 2501934.855072464
[2025-06-03 10:36:27] 2025-06-03 08:28:00,962 | INFO     | -- intersect: -32853160755.230736
[2025-06-03 10:36:27] 2025-06-03 08:28:00,962 | INFO     | intersect: -32853160755.230736
[2025-06-03 10:36:27] 2025-06-03 08:28:00,963 | INFO     | chi2: 7.544987378189472
[2025-06-03 10:36:27] 2025-06-03 08:28:00,963 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 10:36:27] 2025-06-03 08:28:00,964 | INFO     | sum of deviations: 51741459802.499985
[2025-06-03 10:36:27] 2025-06-03 08:28:00,965 | INFO     | mean x: 1748932685.5
[2025-06-03 10:36:27] 2025-06-03 08:28:00,965 | INFO     | mean y: 2501992.9455445544
[2025-06-03 10:36:27] 2025-06-03 08:28:00,965 | INFO     | -- intersect: -35404559318.26772
[2025-06-03 10:36:27] 2025-06-03 08:28:00,965 | INFO     | intersect: -35404559318.26772
[2025-06-03 10:36:27] 2025-06-03 08:28:00,965 | INFO     | chi2: 7.560853086296248
[2025-06-03 10:36:27] 2025-06-03 08:28:00,965 | INFO     | current chi2=7.560853086296248 (change=-0.21028144000134527 %)
[2025-06-03 10:36:27] 2025-06-03 08:28:00,966 | INFO     | right removable region: 201
[2025-06-03 10:36:27] 2025-06-03 08:28:00,966 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 10:36:27] 2025-06-03 08:28:00,967 | INFO     | sum of deviations: -23084547718.49995
[2025-06-03 10:36:27] 2025-06-03 08:28:00,968 | INFO     | mean x: 1748932990.5
[2025-06-03 10:36:27] 2025-06-03 08:28:00,968 | INFO     | mean y: 2560501.1831683167
[2025-06-03 10:36:27] 2025-06-03 08:28:00,968 | INFO     | -- intersect: 15799488961.8578
[2025-06-03 10:36:27] 2025-06-03 08:28:00,968 | INFO     | intersect: 15799488961.8578
[2025-06-03 10:36:27] 2025-06-03 08:28:00,968 | INFO     | chi2: 2.262051724409896
[2025-06-03 10:36:27] 2025-06-03 08:28:00,968 | INFO     | current chi2=2.262051724409896 (change=70.01914501608209 %)
[2025-06-03 10:36:27] 2025-06-03 08:28:00,969 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 10:36:27] 2025-06-03 08:28:00,970 | INFO     | sum of deviations: -67331423142.0
[2025-06-03 10:36:27] 2025-06-03 08:28:00,970 | INFO     | mean x: 1748933143.0
[2025-06-03 10:36:27] 2025-06-03 08:28:00,970 | INFO     | mean y: 2596789.9137055837
[2025-06-03 10:36:27] 2025-06-03 08:28:00,971 | INFO     | -- intersect: 49676134374.564125
[2025-06-03 10:36:27] 2025-06-03 08:28:00,971 | INFO     | intersect: 49676134374.564125
[2025-06-03 10:36:27] 2025-06-03 08:28:00,971 | INFO     | chi2: 0.2832170587243256
[2025-06-03 10:36:27] 2025-06-03 08:28:00,971 | INFO     | current chi2=0.2832170587243256 (change=87.47963825636175 %)
[2025-06-03 10:36:27] 2025-06-03 08:28:00,972 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 10:36:27] 2025-06-03 08:28:00,976 | INFO     | sum of deviations: -72531832229.99998
[2025-06-03 10:36:27] 2025-06-03 08:28:00,980 | INFO     | mean x: 1748933295.5
[2025-06-03 10:36:27] 2025-06-03 08:28:00,980 | INFO     | mean y: 2601243.6458333335
[2025-06-03 10:36:27] 2025-06-03 08:28:00,980 | INFO     | -- intersect: 57803097235.07293
[2025-06-03 10:36:27] 2025-06-03 08:28:00,981 | INFO     | intersect: 57803097235.07293
[2025-06-03 10:36:27] 2025-06-03 08:28:00,981 | INFO     | chi2: 0.18299991355766912
[2025-06-03 10:36:27] 2025-06-03 08:28:00,981 | INFO     | current chi2=0.18299991355766912 (change=35.38527856268879 %)
[2025-06-03 10:36:27] 2025-06-03 08:28:00,981 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 10:36:27] 2025-06-03 08:28:00,983 | INFO     | sum of deviations: -69067585744.00002
[2025-06-03 10:36:27] 2025-06-03 08:28:00,983 | INFO     | mean x: 1748933448.0
[2025-06-03 10:36:27] 2025-06-03 08:28:00,983 | INFO     | mean y: 2598075.7379679144
[2025-06-03 10:36:27] 2025-06-03 08:28:00,983 | INFO     | -- intersect: 59576594519.04997
[2025-06-03 10:36:27] 2025-06-03 08:28:00,983 | INFO     | intersect: 59576594519.04997
[2025-06-03 10:36:27] 2025-06-03 08:28:00,984 | INFO     | chi2: 0.17957263369145549
[2025-06-03 10:36:27] 2025-06-03 08:28:00,984 | INFO     | current chi2=0.17957263369145549 (change=1.8728314126408525 %)
[2025-06-03 10:36:27] 2025-06-03 08:28:00,984 | INFO     | left removable region: 40
[2025-06-03 10:36:27] 2025-06-03 08:28:00,984 | INFO     | sum of square deviations: 1294014960.0
[2025-06-03 10:36:27] 2025-06-03 08:28:00,985 | INFO     | sum of deviations: -48026347187.0
[2025-06-03 10:36:27] 2025-06-03 08:28:00,985 | INFO     | mean x: 1748933875.0
[2025-06-03 10:36:27] 2025-06-03 08:28:00,985 | INFO     | mean y: 2581355.9751552795
[2025-06-03 10:36:27] 2025-06-03 08:28:00,985 | INFO     | -- intersect: 64912886170.268234
[2025-06-03 10:36:27] 2025-06-03 08:28:00,986 | INFO     | intersect: 64912886170.268234
[2025-06-03 10:36:27] 2025-06-03 08:28:00,986 | INFO     | chi2: 0.16904902521735843
[2025-06-03 10:36:27] 2025-06-03 08:28:00,986 | INFO     | -- intersect: 64912886170.268234
[2025-06-03 10:36:27] 2025-06-03 08:28:00,986 | INFO     | current memory leak: -37.11 B/s (using 161 data points, chi2=0.17)
[2025-06-03 10:36:27] 2025-06-03 08:28:00,987 | INFO     | ..............................
[2025-06-03 10:36:27] 2025-06-03 08:28:00,987 | INFO     | . Timing measurements:
[2025-06-03 10:36:27] 2025-06-03 08:28:00,987 | INFO     | . get job = 0 s
[2025-06-03 10:36:27] 2025-06-03 08:28:00,987 | INFO     | . initial setup = 8 s
[2025-06-03 10:36:27] 2025-06-03 08:28:00,987 | INFO     | . payload setup = 156 s
[2025-06-03 10:36:27] 2025-06-03 08:28:00,987 | INFO     | . stage-in = 0 s
[2025-06-03 10:36:27] 2025-06-03 08:28:00,988 | INFO     | . payload execution = 12782 s
[2025-06-03 10:36:27] 2025-06-03 08:28:00,988 | INFO     | . stage-out = 3 s
[2025-06-03 10:36:27] 2025-06-03 08:28:00,988 | INFO     | . log creation = 1 s
[2025-06-03 10:36:27] 2025-06-03 08:28:00,988 | INFO     | ..............................
[2025-06-03 10:36:27] 2025-06-03 08:28:01,149 | INFO     | 
[2025-06-03 10:36:27] 2025-06-03 08:28:01,149 | INFO     | job summary report
[2025-06-03 10:36:27] 2025-06-03 08:28:01,149 | INFO     | --------------------------------------------------
[2025-06-03 10:36:27] 2025-06-03 08:28:01,149 | INFO     | PanDA job id: 6677391210
[2025-06-03 10:36:27] 2025-06-03 08:28:01,149 | INFO     | task id: 45006595
[2025-06-03 10:36:27] 2025-06-03 08:28:01,150 | INFO     | errors: (none)
[2025-06-03 10:36:27] 2025-06-03 08:28:01,150 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:36:27] 2025-06-03 08:28:01,150 | INFO     | pilot state: finished 
[2025-06-03 10:36:27] 2025-06-03 08:28:01,150 | INFO     | transexitcode: 0
[2025-06-03 10:36:27] 2025-06-03 08:28:01,150 | INFO     | exeerrorcode: 0
[2025-06-03 10:36:27] 2025-06-03 08:28:01,150 | INFO     | exeerrordiag: 
[2025-06-03 10:36:27] 2025-06-03 08:28:01,150 | INFO     | exitcode: 0
[2025-06-03 10:36:27] 2025-06-03 08:28:01,150 | INFO     | exitmsg: OK
[2025-06-03 10:36:27] 2025-06-03 08:28:01,150 | INFO     | cpuconsumptiontime: 46731 s
[2025-06-03 10:36:27] 2025-06-03 08:28:01,150 | INFO     | nevents: 400
[2025-06-03 10:36:27] 2025-06-03 08:28:01,150 | INFO     | neventsw: 0
[2025-06-03 10:36:27] 2025-06-03 08:28:01,150 | INFO     | pid: 9083
[2025-06-03 10:36:27] 2025-06-03 08:28:01,151 | INFO     | pgrp: 9083
[2025-06-03 10:36:27] 2025-06-03 08:28:01,151 | INFO     | corecount: 8
[2025-06-03 10:36:27] 2025-06-03 08:28:01,151 | INFO     | event service: False
[2025-06-03 10:36:27] 2025-06-03 08:28:01,151 | INFO     | sizes: {0: 2404349, 1: 2405034, 2: 2405233, 13: 2405233, 24: 2405289, 34: 2405317, 45: 2405473, 56: 2405501, 66: 2405529, 77: 2405557, 88: 2405613, 89: 2406127, 99
[2025-06-03 10:36:27] 2025-06-03 08:28:01,151 | INFO     | --------------------------------------------------
[2025-06-03 10:36:27] 2025-06-03 08:28:01,151 | INFO     | 
[2025-06-03 10:36:27] 2025-06-03 08:28:01,151 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-03 10:36:27] 2025-06-03 08:28:01,766 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,767 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,767 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,767 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,768 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:36:27] 2025-06-03 08:28:01,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,769 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:36:27] 2025-06-03 08:28:01,769 | INFO     | job 6677391210 has completed (purged errors)
[2025-06-03 10:36:27] 2025-06-03 08:28:01,769 | INFO     | overall cleanup function is called
[2025-06-03 10:36:27] 2025-06-03 08:28:02,778 | INFO     | --- collectZombieJob: --- 10, [9083]
[2025-06-03 10:36:27] 2025-06-03 08:28:02,778 | INFO     | zombie collector waiting for pid 9083
[2025-06-03 10:36:27] 2025-06-03 08:28:02,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:36:27] 2025-06-03 08:28:02,779 | INFO     | collected zombie processes
[2025-06-03 10:36:27] 2025-06-03 08:28:02,779 | INFO     | will attempt to kill all subprocesses of pid=9083
[2025-06-03 10:36:27] 2025-06-03 08:28:02,919 | INFO     | process IDs to be killed: [9083] (in reverse order)
[2025-06-03 10:36:27] 2025-06-03 08:28:03,820 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:36:27] 2025-06-03 08:28:03,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:36:27] 2025-06-03 08:28:03,823 | INFO     | did not find any defunct processes belonging to 9083
[2025-06-03 10:36:27] 2025-06-03 08:28:03,826 | INFO     | did not find any defunct processes belonging to 9083
[2025-06-03 10:36:27] 2025-06-03 08:28:03,827 | INFO     | ready for new job
[2025-06-03 10:36:27] 2025-06-03 08:28:03,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:36:27] 2025-06-03 08:28:03,832 | INFO     | **************************************
[2025-06-03 10:36:27] 2025-06-03 08:28:03,833 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:36:27] 2025-06-03 08:28:03,833 | INFO     | **************************************
[2025-06-03 10:36:27] 2025-06-03 08:28:03,833 | INFO     | 
[2025-06-03 10:36:27] 2025-06-03 08:28:03,834 | INFO     | pilot is running in a VM
[2025-06-03 10:36:27] 2025-06-03 08:28:03,834 | INFO     | architecture information:
[2025-06-03 10:36:27] 2025-06-03 08:28:03,840 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:36:27] 2025-06-03 08:28:04,024 | INFO     | cat /etc/os-release:
[2025-06-03 10:36:27] NAME="CentOS Linux"
[2025-06-03 10:36:27] VERSION="7 (Core)"
[2025-06-03 10:36:27] ID="centos"
[2025-06-03 10:36:27] ID_LIKE="rhel fedora"
[2025-06-03 10:36:27] VERSION_ID="7"
[2025-06-03 10:36:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:36:27] ANSI_COLOR="0;31"
[2025-06-03 10:36:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:36:27] HOME_URL="https://www.centos.org/"
[2025-06-03 10:36:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:36:27] 
[2025-06-03 10:36:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:36:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:36:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:36:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:36:27] 
[2025-06-03 10:36:27] 2025-06-03 08:28:04,027 | INFO     | **************************************
[2025-06-03 10:36:27] 2025-06-03 08:28:04,531 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-03 10:36:27] 2025-06-03 08:28:04,810 | INFO     | sufficient remaining disk space (496928555008 B)
[2025-06-03 10:36:27] 2025-06-03 08:28:04,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:36:27] 2025-06-03 08:28:04,811 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:36:27] 2025-06-03 08:28:04,811 | INFO     | update_server=False
[2025-06-03 10:36:27] 2025-06-03 08:28:04,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:36:27] 2025-06-03 08:28:04,847 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 10:36:27] 2025-06-03 08:28:04,847 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 10:36:27] 2025-06-03 08:28:04,848 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:36:27] 2025-06-03 08:28:04,848 | INFO     | will abort loop
[2025-06-03 10:36:27] 2025-06-03 08:28:05,618 | INFO     | all payload control threads have been joined
[2025-06-03 10:36:27] 2025-06-03 08:28:05,701 | INFO     | all data control threads have been joined
[2025-06-03 10:36:27] 2025-06-03 08:28:05,720 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:36:27] 2025-06-03 08:28:05,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:36:27] 2025-06-03 08:28:05,721 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:36:27] 2025-06-03 08:28:05,817 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:05,854 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:05,988 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:06,023 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:06,068 | INFO     | [job] validate thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:06,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:36:27] 2025-06-03 08:28:06,132 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:06,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:36:27] 2025-06-03 08:28:06,265 | INFO     | all job control threads have been joined
[2025-06-03 10:36:27] 2025-06-03 08:28:06,434 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:06,523 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:06,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:06,624 | INFO     | [payload] control thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:06,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:36:27] 2025-06-03 08:28:06,708 | INFO     | [data] control thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:07,161 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:07,164 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:07,271 | INFO     | [job] control thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:08,138 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:10,712 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:36:27] 2025-06-03 08:28:12,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273835259712)>', '<ExcThread(monitor, started 140272876902144)>']
[2025-06-03 10:36:27] 2025-06-03 08:28:12,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:36:27] 2025-06-03 08:28:12,760 | INFO     | [monitor] control thread has ended
[2025-06-03 10:36:27] 2025-06-03 08:28:17,066 | INFO     | all workflow threads have been joined
[2025-06-03 10:36:27] 2025-06-03 08:28:17,066 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:36:27] 2025-06-03 08:28:17,066 | INFO     | traces error code: 0
[2025-06-03 10:36:27] 2025-06-03 08:28:17,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:36:27] 2025-06-03 08:28:17,302 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:36:27] 2025-06-03 08:28:17,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:36:27] 2025-06-03 08:28:17,431 [wrapper] pilotpid: 2141
[2025-06-03 10:36:27] 2025-06-03 08:28:17,480 [wrapper] Pilot exit status: 0
[2025-06-03 10:36:27] 2025-06-03 08:28:17,907 [wrapper] pandaids: 6677391210
[2025-06-03 10:36:27] 2025-06-03 08:28:18,690 [wrapper] cleanup supervisor_pilot 25188 2142
[2025-06-03 10:36:27] 2025-06-03 08:28:18,807 [wrapper] Test setup, not cleaning
[2025-06-03 10:36:27] 2025-06-03 08:28:18,877 [wrapper] apfmon messages muted
[2025-06-03 10:36:27] 2025-06-03 08:28:18,974 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:36:27] 2025-06-03 08:28:19,019 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:36:27]  *** Error codes and diagnostics ***
[2025-06-03 10:36:27]     "exeErrorCode": 0,
[2025-06-03 10:36:27]     "exeErrorDiag": "",
[2025-06-03 10:36:27]     "pilotErrorCode": 0,
[2025-06-03 10:36:27]     "pilotErrorDiag": "",
[2025-06-03 10:36:27]  *** Listing of results directory ***
[2025-06-03 10:36:28] total 386500
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-03 10:36:28] -rwx------. 1 boinc boinc     37140 Jun  2 20:14 runpilot2-wrapper.sh
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:14 queuedata.json
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc       100 Jun  3 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:36:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 06:44 run_atlas
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc       105 Jun  3 06:44 job.xml
[2025-06-03 10:36:28] -rw-r--r--. 2 boinc boinc 215212176 Jun  3 06:44 EVNT.45006593._000280.pool.root.1
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc      6391 Jun  3 06:44 init_data.xml
[2025-06-03 10:36:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:44 start_atlas.sh
[2025-06-03 10:36:28] drwxrwx--x. 2 boinc boinc        68 Jun  3 06:44 shared
[2025-06-03 10:36:28] -rw-r--r--. 2 boinc boinc    508869 Jun  3 06:44 input.tar.gz
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc         0 Jun  3 06:44 boinc_lockfile
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc      2521 Jun  3 06:44 pandaJob.out
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc    988073 Jun  3 06:47 agis_schedconf.cvmfs.json
[2025-06-03 10:36:28] drwx------. 4 boinc boinc      4096 Jun  3 06:47 pilot3
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc 173730290 Jun  3 10:25 HITS.45006595._006989.pool.root.1
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc       531 Jun  3 10:26 boinc_task_state.xml
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc      1016 Jun  3 10:26 memory_monitor_summary.json
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc   1603667 Jun  3 10:26 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc    375523 Jun  3 10:26 log.45006595._006989.job.log.tgz.1
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc        95 Jun  3 10:27 pilot_heartbeat.json
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc      7694 Jun  3 10:28 heartbeat.json
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc      4602 Jun  3 10:28 pilotlog.txt
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc   1129975 Jun  3 10:28 log.45006595._006989.job.log.1
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc       357 Jun  3 10:28 output.list
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc       620 Jun  3 10:28 runtime_log
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc   1525760 Jun  3 10:28 result.tar.gz
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc      8659 Jun  3 10:28 runtime_log.err
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc       656 Jun  3 10:28 fQGLDmGrOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmP8VKDmrJqFbn.diag
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc      8192 Jun  3 10:36 boinc_mmap_file
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc        28 Jun  3 10:36 wrapper_checkpoint.txt
[2025-06-03 10:36:28] -rw-r--r--. 1 boinc boinc     20472 Jun  3 10:36 stderr.txt
[2025-06-03 10:36:28] HITS file was successfully produced:
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc 173730290 Jun  3 10:25 shared/HITS.pool.root.1
[2025-06-03 10:36:28]  *** Contents of shared directory: ***
[2025-06-03 10:36:28] total 381840
[2025-06-03 10:36:28] -rw-r--r--. 2 boinc boinc 215212176 Jun  3 06:44 ATLAS.root_0
[2025-06-03 10:36:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:44 start_atlas.sh
[2025-06-03 10:36:28] -rw-r--r--. 2 boinc boinc    508869 Jun  3 06:44 input.tar.gz
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc 173730290 Jun  3 10:25 HITS.pool.root.1
[2025-06-03 10:36:28] -rw-------. 1 boinc boinc   1525760 Jun  3 10:28 result.tar.gz
10:36:29 (27004): run_atlas exited; CPU time 46901.981187
10:36:29 (27004): called boinc_finish(0)

</stderr_txt>
]]>

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