Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:04:39 (3979250): wrapper (7.7.26015): starting
17:04:39 (3979250): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 17:04:39] Arguments: --nthreads 8
[2025-06-02 17:04:39] Threads: 8
[2025-06-02 17:04:39] Checking for CVMFS
[2025-06-02 17:04:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 17:04:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 17:04:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 17:04:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 17:04:42] 2.12.6.0 199032 142858 931236 146718 3 300 27668529 32935936 22177 130560 0 672135656 99.684 550539989 20727 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-02 17:04:42] CVMFS is ok
[2025-06-02 17:04:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 17:04:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 17:04:42] Further information can be found at the LHC@home message board.
[2025-06-02 17:04:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 17:04:42] Checking for apptainer binary...
[2025-06-02 17:04:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 17:04:42] Running /usr/bin/apptainer --version
[2025-06-02 17:04:42] apptainer version 1.4.1-1.el9
[2025-06-02 17:04:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 17:04:43] lc-10-9.aglt2.org
[2025-06-02 17:04:43] apptainer works
[2025-06-02 17:04:43] Set ATHENA_PROC_NUMBER=8
[2025-06-02 17:04:43] Set ATHENA_CORE_NUMBER=8
[2025-06-02 17:04:43] Starting ATLAS job with PandaID=6677386328
[2025-06-02 17:04:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 20:30:49]  *** The last 200 lines of the pilot log: ***
[2025-06-02 20:30:49] 2025-06-03 00:30:20,041 | INFO     | monitor loop #691: job 0:6677386328 is in state 'finished'
[2025-06-02 20:30:49] 2025-06-03 00:30:20,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 20:30:49] 2025-06-03 00:30:22,556 | INFO     | monitor loop #692: job 0:6677386328 is in state 'finished'
[2025-06-02 20:30:49] 2025-06-03 00:30:22,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 20:30:49] 2025-06-03 00:30:25,061 | INFO     | monitor loop #693: job 0:6677386328 is in state 'finished'
[2025-06-02 20:30:49] 2025-06-03 00:30:25,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 20:30:49] 2025-06-03 00:30:25,224 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 20:30:49] 2025-06-03 00:30:25,227 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677386328/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 20:30:49] 2025-06-03 00:30:25,253 | INFO     | extracted standard info from prmon json
[2025-06-02 20:30:49] 2025-06-03 00:30:25,253 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 20:30:49] 2025-06-03 00:30:25,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 20:30:49] 2025-06-03 00:30:25,254 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 20:30:49] 2025-06-03 00:30:25,254 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 20:30:49] 2025-06-03 00:30:25,319 | INFO     | fitting pss+swap vs Time
[2025-06-02 20:30:49] 2025-06-03 00:30:25,320 | INFO     | sum of square deviations: 2406938299.252533
[2025-06-02 20:30:49] 2025-06-03 00:30:25,321 | INFO     | sum of deviations: 47099030710.88886
[2025-06-02 20:30:49] 2025-06-03 00:30:25,321 | INFO     | mean x: 1748904506.6464646
[2025-06-02 20:30:49] 2025-06-03 00:30:25,322 | INFO     | mean y: 2118318.5555555555
[2025-06-02 20:30:49] 2025-06-03 00:30:25,322 | INFO     | -- intersect: -34220490168.971542
[2025-06-02 20:30:49] 2025-06-03 00:30:25,322 | INFO     | intersect: -34220490168.971542
[2025-06-02 20:30:49] 2025-06-03 00:30:25,322 | INFO     | chi2: 3.115157239034212
[2025-06-02 20:30:49] 2025-06-03 00:30:25,323 | INFO     | sum of square deviations: 2229167066.6424856
[2025-06-02 20:30:49] 2025-06-03 00:30:25,332 | INFO     | sum of deviations: 57012786807.69943
[2025-06-02 20:30:49] 2025-06-03 00:30:25,332 | INFO     | mean x: 1748904354.150259
[2025-06-02 20:30:49] 2025-06-03 00:30:25,332 | INFO     | mean y: 2126634.0103626945
[2025-06-02 20:30:49] 2025-06-03 00:30:25,332 | INFO     | -- intersect: -44727545081.625786
[2025-06-02 20:30:49] 2025-06-03 00:30:25,332 | INFO     | intersect: -44727545081.625786
[2025-06-02 20:30:49] 2025-06-03 00:30:25,333 | INFO     | chi2: 2.440099441399501
[2025-06-02 20:30:49] 2025-06-03 00:30:25,333 | INFO     | current chi2=2.440099441399501 (change=21.670103491918702 %)
[2025-06-02 20:30:49] 2025-06-03 00:30:25,333 | INFO     | right removable region: 192
[2025-06-02 20:30:49] 2025-06-03 00:30:25,333 | INFO     | sum of square deviations: 2229149376.6424856
[2025-06-02 20:30:49] 2025-06-03 00:30:25,355 | INFO     | sum of deviations: 8636361610.595856
[2025-06-02 20:30:49] 2025-06-03 00:30:25,355 | INFO     | mean x: 1748904659.150259
[2025-06-02 20:30:49] 2025-06-03 00:30:25,355 | INFO     | mean y: 2151126.082901554
[2025-06-02 20:30:49] 2025-06-03 00:30:25,356 | INFO     | -- intersect: -6773605230.64328
[2025-06-02 20:30:49] 2025-06-03 00:30:25,356 | INFO     | intersect: -6773605230.64328
[2025-06-02 20:30:49] 2025-06-03 00:30:25,356 | INFO     | chi2: 0.9631594595739993
[2025-06-02 20:30:49] 2025-06-03 00:30:25,356 | INFO     | current chi2=0.9631594595739993 (change=69.08151384767318 %)
[2025-06-02 20:30:49] 2025-06-03 00:30:25,356 | INFO     | sum of square deviations: 2060349138.8297827
[2025-06-02 20:30:49] 2025-06-03 00:30:25,378 | INFO     | sum of deviations: -2993734217.2978706
[2025-06-02 20:30:49] 2025-06-03 00:30:25,379 | INFO     | mean x: 1748904811.6489363
[2025-06-02 20:30:49] 2025-06-03 00:30:25,379 | INFO     | mean y: 2161620.510638298
[2025-06-02 20:30:49] 2025-06-03 00:30:25,379 | INFO     | -- intersect: 2543360138.1580224
[2025-06-02 20:30:49] 2025-06-03 00:30:25,379 | INFO     | intersect: 2543360138.1580224
[2025-06-02 20:30:49] 2025-06-03 00:30:25,379 | INFO     | chi2: 0.7833330996855637
[2025-06-02 20:30:49] 2025-06-03 00:30:25,380 | INFO     | current chi2=0.7833330996855637 (change=18.67046604805936 %)
[2025-06-02 20:30:49] 2025-06-03 00:30:25,380 | INFO     | left removable region: 20
[2025-06-02 20:30:49] 2025-06-03 00:30:25,380 | INFO     | sum of square deviations: 1577788142.441861
[2025-06-02 20:30:49] 2025-06-03 00:30:25,381 | INFO     | sum of deviations: 6761227812.116281
[2025-06-02 20:30:49] 2025-06-03 00:30:25,381 | INFO     | mean x: 1748904933.6627908
[2025-06-02 20:30:49] 2025-06-03 00:30:25,381 | INFO     | mean y: 2172299.1744186045
[2025-06-02 20:30:49] 2025-06-03 00:30:25,381 | INFO     | -- intersect: -7492334954.459579
[2025-06-02 20:30:49] 2025-06-03 00:30:25,382 | INFO     | intersect: -7492334954.459579
[2025-06-02 20:30:49] 2025-06-03 00:30:25,382 | INFO     | chi2: 0.03505074991005282
[2025-06-02 20:30:49] 2025-06-03 00:30:25,382 | INFO     | -- intersect: -7492334954.459579
[2025-06-02 20:30:49] 2025-06-03 00:30:25,382 | INFO     | current memory leak: 4.29 B/s (using 172 data points, chi2=0.04)
[2025-06-02 20:30:49] 2025-06-03 00:30:25,392 | INFO     | ..............................
[2025-06-02 20:30:49] 2025-06-03 00:30:25,392 | INFO     | . Timing measurements:
[2025-06-02 20:30:49] 2025-06-03 00:30:25,392 | INFO     | . get job = 0 s
[2025-06-02 20:30:49] 2025-06-03 00:30:25,393 | INFO     | . initial setup = 8 s
[2025-06-02 20:30:49] 2025-06-03 00:30:25,393 | INFO     | . payload setup = 48 s
[2025-06-02 20:30:49] 2025-06-03 00:30:25,393 | INFO     | . stage-in = 0 s
[2025-06-02 20:30:49] 2025-06-03 00:30:25,393 | INFO     | . payload execution = 12103 s
[2025-06-02 20:30:49] 2025-06-03 00:30:25,393 | INFO     | . stage-out = 9 s
[2025-06-02 20:30:49] 2025-06-03 00:30:25,393 | INFO     | . log creation = 1 s
[2025-06-02 20:30:49] 2025-06-03 00:30:25,393 | INFO     | ..............................
[2025-06-02 20:30:49] 2025-06-03 00:30:26,132 | INFO     | 
[2025-06-02 20:30:49] 2025-06-03 00:30:26,132 | INFO     | job summary report
[2025-06-02 20:30:49] 2025-06-03 00:30:26,132 | INFO     | --------------------------------------------------
[2025-06-02 20:30:49] 2025-06-03 00:30:26,132 | INFO     | PanDA job id: 6677386328
[2025-06-02 20:30:49] 2025-06-03 00:30:26,132 | INFO     | task id: 45006595
[2025-06-02 20:30:49] 2025-06-03 00:30:26,133 | INFO     | errors: (none)
[2025-06-02 20:30:49] 2025-06-03 00:30:26,133 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 20:30:49] 2025-06-03 00:30:26,133 | INFO     | pilot state: finished 
[2025-06-02 20:30:49] 2025-06-03 00:30:26,133 | INFO     | transexitcode: 0
[2025-06-02 20:30:49] 2025-06-03 00:30:26,133 | INFO     | exeerrorcode: 0
[2025-06-02 20:30:49] 2025-06-03 00:30:26,133 | INFO     | exeerrordiag: 
[2025-06-02 20:30:49] 2025-06-03 00:30:26,133 | INFO     | exitcode: 0
[2025-06-02 20:30:49] 2025-06-03 00:30:26,133 | INFO     | exitmsg: OK
[2025-06-02 20:30:49] 2025-06-03 00:30:26,133 | INFO     | cpuconsumptiontime: 43021 s
[2025-06-02 20:30:49] 2025-06-03 00:30:26,133 | INFO     | nevents: 400
[2025-06-02 20:30:49] 2025-06-03 00:30:26,133 | INFO     | neventsw: 0
[2025-06-02 20:30:49] 2025-06-03 00:30:26,133 | INFO     | pid: 4042834
[2025-06-02 20:30:49] 2025-06-03 00:30:26,134 | INFO     | pgrp: 4042834
[2025-06-02 20:30:49] 2025-06-03 00:30:26,134 | INFO     | corecount: 8
[2025-06-02 20:30:49] 2025-06-03 00:30:26,134 | INFO     | event service: False
[2025-06-02 20:30:49] 2025-06-03 00:30:26,134 | INFO     | sizes: {0: 2404950, 1: 2405205, 2: 2405233, 13: 2405233, 24: 2405289, 32: 2405523, 35: 2405679, 12157: 2435086, 12168: 2444111, 12205: 2444225}
[2025-06-02 20:30:49] 2025-06-03 00:30:26,134 | INFO     | --------------------------------------------------
[2025-06-02 20:30:49] 2025-06-03 00:30:26,134 | INFO     | 
[2025-06-02 20:30:49] 2025-06-03 00:30:26,154 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-02 20:30:49] 2025-06-03 00:30:26,318 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,319 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,319 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,319 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,319 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,319 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,320 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,320 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,320 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,320 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,320 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,320 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 20:30:49] 2025-06-03 00:30:26,320 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,320 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 20:30:49] 2025-06-03 00:30:26,320 | INFO     | job 6677386328 has completed (purged errors)
[2025-06-02 20:30:49] 2025-06-03 00:30:26,321 | INFO     | overall cleanup function is called
[2025-06-02 20:30:49] 2025-06-03 00:30:27,348 | INFO     | --- collectZombieJob: --- 10, [4042834]
[2025-06-02 20:30:49] 2025-06-03 00:30:27,348 | INFO     | zombie collector waiting for pid 4042834
[2025-06-02 20:30:49] 2025-06-03 00:30:27,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 20:30:49] 2025-06-03 00:30:27,348 | INFO     | collected zombie processes
[2025-06-02 20:30:49] 2025-06-03 00:30:27,348 | INFO     | will attempt to kill all subprocesses of pid=4042834
[2025-06-02 20:30:49] 2025-06-03 00:30:30,245 | INFO     | process IDs to be killed: [4042834] (in reverse order)
[2025-06-02 20:30:49] 2025-06-03 00:30:31,459 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 20:30:49] 2025-06-03 00:30:31,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 20:30:49] 2025-06-03 00:30:31,703 | INFO     | did not find any defunct processes belonging to 4042834
[2025-06-02 20:30:49] 2025-06-03 00:30:31,887 | INFO     | did not find any defunct processes belonging to 4042834
[2025-06-02 20:30:49] 2025-06-03 00:30:31,898 | INFO     | ready for new job
[2025-06-02 20:30:49] 2025-06-03 00:30:31,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 20:30:49] 2025-06-03 00:30:31,901 | INFO     | **************************************
[2025-06-02 20:30:49] 2025-06-03 00:30:31,901 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 20:30:49] 2025-06-03 00:30:31,901 | INFO     | **************************************
[2025-06-02 20:30:49] 2025-06-03 00:30:31,901 | INFO     | 
[2025-06-02 20:30:49] 2025-06-03 00:30:31,946 | INFO     | architecture information:
[2025-06-02 20:30:49] 2025-06-03 00:30:31,984 | INFO     | executing command: cat /etc/os-release
[2025-06-02 20:30:49] 2025-06-03 00:30:32,094 | INFO     | cat /etc/os-release:
[2025-06-02 20:30:49] NAME="CentOS Linux"
[2025-06-02 20:30:49] VERSION="7 (Core)"
[2025-06-02 20:30:49] ID="centos"
[2025-06-02 20:30:49] ID_LIKE="rhel fedora"
[2025-06-02 20:30:49] VERSION_ID="7"
[2025-06-02 20:30:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 20:30:49] ANSI_COLOR="0;31"
[2025-06-02 20:30:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 20:30:49] HOME_URL="https://www.centos.org/"
[2025-06-02 20:30:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 20:30:49] 
[2025-06-02 20:30:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 20:30:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 20:30:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 20:30:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 20:30:49] 
[2025-06-02 20:30:49] 2025-06-03 00:30:32,094 | INFO     | **************************************
[2025-06-02 20:30:49] 2025-06-03 00:30:32,618 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-02 20:30:49] 2025-06-03 00:30:32,796 | INFO     | sufficient remaining disk space (95464456192 B)
[2025-06-02 20:30:49] 2025-06-03 00:30:32,797 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 20:30:49] 2025-06-03 00:30:32,797 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 20:30:49] 2025-06-03 00:30:32,797 | INFO     | update_server=False
[2025-06-02 20:30:49] 2025-06-03 00:30:32,797 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 20:30:49] 2025-06-03 00:30:32,982 | INFO     | all payload control threads have been joined
[2025-06-02 20:30:49] 2025-06-03 00:30:33,502 | INFO     | all job control threads have been joined
[2025-06-02 20:30:49] 2025-06-03 00:30:33,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 20:30:49] 2025-06-03 00:30:33,673 | INFO     | aborting loop
[2025-06-02 20:30:49] 2025-06-03 00:30:33,763 | INFO     | all data control threads have been joined
[2025-06-02 20:30:49] 2025-06-03 00:30:33,803 | INFO     | [job] retrieve thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:33,988 | INFO     | [payload] control thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:34,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 20:30:49] 2025-06-03 00:30:34,231 | INFO     | [payload] failed_post thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:34,474 | INFO     | [payload] validate_post thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:34,477 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:34,508 | INFO     | [job] control thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:34,698 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:34,707 | INFO     | [job] job monitor thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:34,783 | INFO     | [data] control thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:34,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 20:30:49] 2025-06-03 00:30:35,088 | INFO     | [data] copytool_in thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:35,211 | INFO     | [job] validate thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:35,219 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:35,219 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:35,408 | INFO     | PID=4002925 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-02 20:30:49] 2025-06-03 00:30:35,463 | INFO     | .. there are 49 such processes running
[2025-06-02 20:30:49] 2025-06-03 00:30:35,464 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 20:30:49] 2025-06-03 00:30:35,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 20:30:49] 2025-06-03 00:30:35,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 20:30:49] 2025-06-03 00:30:35,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 20:30:49] 2025-06-03 00:30:35,995 | INFO     | [job] queue monitor thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:36,212 | INFO     | [data] copytool_out thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:39,856 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 20:30:49] 2025-06-03 00:30:41,725 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086307383104)>', '<ExcThread(monitor, started 140085961930496)>']
[2025-06-02 20:30:49] 2025-06-03 00:30:42,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 20:30:49] 2025-06-03 00:30:42,506 | INFO     | [monitor] control thread has ended
[2025-06-02 20:30:49] 2025-06-03 00:30:46,751 | INFO     | all workflow threads have been joined
[2025-06-02 20:30:49] 2025-06-03 00:30:46,751 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 20:30:49] 2025-06-03 00:30:46,752 | INFO     | traces error code: 0
[2025-06-02 20:30:49] 2025-06-03 00:30:46,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 20:30:49] 2025-06-03 00:30:47,935 [wrapper] ==== pilot stdout END ====
[2025-06-02 20:30:49] 2025-06-03 00:30:47,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 20:30:49] 2025-06-03 00:30:48,071 [wrapper] pilotpid: 4002925
[2025-06-02 20:30:49] 2025-06-03 00:30:48,111 [wrapper] Pilot exit status: 0
[2025-06-02 20:30:49] 2025-06-03 00:30:48,304 [wrapper] pandaids: 6677386328
[2025-06-02 20:30:49] 2025-06-03 00:30:49,200 [wrapper] cleanup supervisor_pilot 2078488 4002926
[2025-06-02 20:30:49] 2025-06-03 00:30:49,245 [wrapper] Test setup, not cleaning
[2025-06-02 20:30:49] 2025-06-03 00:30:49,248 [wrapper] apfmon messages muted
[2025-06-02 20:30:49] 2025-06-03 00:30:49,251 [wrapper] ==== wrapper stdout END ====
[2025-06-02 20:30:49] 2025-06-03 00:30:49,254 [wrapper] ==== wrapper stderr END ====
[2025-06-02 20:30:49]  *** Error codes and diagnostics ***
[2025-06-02 20:30:50]     "exeErrorCode": 0,
[2025-06-02 20:30:50]     "exeErrorDiag": "",
[2025-06-02 20:30:50]     "pilotErrorCode": 0,
[2025-06-02 20:30:50]     "pilotErrorDiag": "",
[2025-06-02 20:30:50]  *** Listing of results directory ***
[2025-06-02 20:30:50] total 394000
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 13:07 pilot3.tar.gz
[2025-06-02 20:30:50] -rwx------. 1 boincer umatlas     37140 Jun  2 13:08 runpilot2-wrapper.sh
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 13:08 queuedata.json
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas       100 Jun  2 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 20:30:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  2 17:04 run_atlas
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas       105 Jun  2 17:04 job.xml
[2025-06-02 20:30:50] -rw-r--r--. 2 boincer umatlas 216003981 Jun  2 17:04 EVNT.45006593._000196.pool.root.1
[2025-06-02 20:30:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 17:04 start_atlas.sh
[2025-06-02 20:30:50] drwxrwx--x. 2 boincer umatlas      4096 Jun  2 17:04 shared
[2025-06-02 20:30:50] -rw-r--r--. 2 boincer umatlas    508872 Jun  2 17:04 input.tar.gz
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas         0 Jun  2 17:04 boinc_lockfile
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas      2521 Jun  2 17:04 pandaJob.out
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas    987975 Jun  2 17:05 agis_schedconf.cvmfs.json
[2025-06-02 20:30:50] drwx------. 4 boincer umatlas      4096 Jun  2 17:05 pilot3
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas      6864 Jun  2 20:21 init_data.xml
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas 180988122 Jun  2 20:28 HITS.45006595._004887.pool.root.1
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas       531 Jun  2 20:28 boinc_task_state.xml
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas      1043 Jun  2 20:29 memory_monitor_summary.json
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas   1603667 Jun  2 20:29 agis_ddmendpoints.agis.ALL.json
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas    363469 Jun  2 20:29 log.45006595._004887.job.log.tgz.1
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas        95 Jun  2 20:29 pilot_heartbeat.json
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas      7716 Jun  2 20:30 heartbeat.json
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas      8192 Jun  2 20:30 boinc_mmap_file
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas        28 Jun  2 20:30 wrapper_checkpoint.txt
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas      4748 Jun  2 20:30 pilotlog.txt
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas    951889 Jun  2 20:30 log.45006595._004887.job.log.1
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas       357 Jun  2 20:30 output.list
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas       620 Jun  2 20:30 runtime_log
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas   1331200 Jun  2 20:30 result.tar.gz
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas      8655 Jun  2 20:30 runtime_log.err
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas       655 Jun  2 20:30 Ig3MDm1oNg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAtVKDm5Xi6Rn.diag
[2025-06-02 20:30:50] -rw-r--r--. 1 boincer umatlas     21013 Jun  2 20:30 stderr.txt
[2025-06-02 20:30:50] HITS file was successfully produced:
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas 180988122 Jun  2 20:28 shared/HITS.pool.root.1
[2025-06-02 20:30:50]  *** Contents of shared directory: ***
[2025-06-02 20:30:50] total 389512
[2025-06-02 20:30:50] -rw-r--r--. 2 boincer umatlas 216003981 Jun  2 17:04 ATLAS.root_0
[2025-06-02 20:30:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 17:04 start_atlas.sh
[2025-06-02 20:30:50] -rw-r--r--. 2 boincer umatlas    508872 Jun  2 17:04 input.tar.gz
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas 180988122 Jun  2 20:28 HITS.pool.root.1
[2025-06-02 20:30:50] -rw-------. 1 boincer umatlas   1331200 Jun  2 20:30 result.tar.gz
20:30:51 (3979250): run_atlas exited; CPU time 43760.854720
20:30:51 (3979250): called boinc_finish(0)

</stderr_txt>
]]>

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