Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:17:24 (32725): wrapper (7.7.26015): starting
07:17:24 (32725): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:17:24] Arguments: --nthreads 8
[2025-06-03 07:17:24] Threads: 8
[2025-06-03 07:17:24] Checking for CVMFS
[2025-06-03 07:17:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:17:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:17:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:17:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:17:28] 2.11.2.0 31392 31350 96528 146729 2 60 23509483 25165824 4632 130560 0 16412693 99.768 18936342 2002 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 07:17:28] CVMFS is ok
[2025-06-03 07:17:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:17:28] Checking for apptainer binary...
[2025-06-03 07:17:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:17:28] Running /usr/bin/apptainer --version
[2025-06-03 07:17:28] apptainer version 1.3.2-1.el7
[2025-06-03 08:15:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:15:03] cg-vwn267.simple-grid.lan
[2025-06-03 08:15:03] apptainer works
[2025-06-03 08:15:03] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:15:03] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:15:03] Starting ATLAS job with PandaID=6677385931
[2025-06-03 08:15:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:53:24]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:53:24] 2025-06-03 09:49:11,980 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:53:24] 2025-06-03 09:49:11,980 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:53:24] 2025-06-03 09:49:11,981 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:53:24] 2025-06-03 09:49:11,981 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:53:24] 2025-06-03 09:49:11,985 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:53:24] 2025-06-03 09:49:11,986 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 11:53:24] 2025-06-03 09:49:11,988 | INFO     | sum of deviations: 26367526818.00002
[2025-06-03 11:53:24] 2025-06-03 09:49:11,988 | INFO     | mean x: 1748937693.5
[2025-06-03 11:53:24] 2025-06-03 09:49:11,988 | INFO     | mean y: 2449901.4134615385
[2025-06-03 11:53:24] 2025-06-03 09:49:11,988 | INFO     | -- intersect: -16524219659.104425
[2025-06-03 11:53:24] 2025-06-03 09:49:11,988 | INFO     | intersect: -16524219659.104425
[2025-06-03 11:53:24] 2025-06-03 09:49:11,989 | INFO     | chi2: 2.276171543847726
[2025-06-03 11:53:24] 2025-06-03 09:49:11,989 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 11:53:24] 2025-06-03 09:49:11,991 | INFO     | sum of deviations: 39192746257.0
[2025-06-03 11:53:24] 2025-06-03 09:49:11,991 | INFO     | mean x: 1748937541.0
[2025-06-03 11:53:24] 2025-06-03 09:49:11,991 | INFO     | mean y: 2459649.8866995075
[2025-06-03 11:53:24] 2025-06-03 09:49:11,991 | INFO     | -- intersect: -26423088032.11522
[2025-06-03 11:53:24] 2025-06-03 09:49:11,991 | INFO     | intersect: -26423088032.11522
[2025-06-03 11:53:24] 2025-06-03 09:49:11,991 | INFO     | chi2: 1.4981617728724947
[2025-06-03 11:53:24] 2025-06-03 09:49:11,991 | INFO     | current chi2=1.4981617728724947 (change=34.18062988609612 %)
[2025-06-03 11:53:24] 2025-06-03 09:49:11,992 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 11:53:24] 2025-06-03 09:49:11,993 | INFO     | sum of deviations: 37972676717.0
[2025-06-03 11:53:24] 2025-06-03 09:49:11,993 | INFO     | mean x: 1748937388.5
[2025-06-03 11:53:24] 2025-06-03 09:49:11,993 | INFO     | mean y: 2458654.6565656564
[2025-06-03 11:53:24] 2025-06-03 09:49:11,993 | INFO     | -- intersect: -27589501692.084454
[2025-06-03 11:53:24] 2025-06-03 09:49:11,993 | INFO     | intersect: -27589501692.084454
[2025-06-03 11:53:24] 2025-06-03 09:49:11,994 | INFO     | chi2: 1.4987800604624575
[2025-06-03 11:53:24] 2025-06-03 09:49:11,994 | INFO     | current chi2=1.4987800604624575 (change=-0.04126974811119824 %)
[2025-06-03 11:53:24] 2025-06-03 09:49:11,994 | INFO     | right removable region: 197
[2025-06-03 11:53:24] 2025-06-03 09:49:11,994 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 11:53:24] 2025-06-03 09:49:11,996 | INFO     | sum of deviations: -6608588476.0
[2025-06-03 11:53:24] 2025-06-03 09:49:11,996 | INFO     | mean x: 1748937846.0
[2025-06-03 11:53:24] 2025-06-03 09:49:11,996 | INFO     | mean y: 2475248.0147783253
[2025-06-03 11:53:24] 2025-06-03 09:49:11,996 | INFO     | -- intersect: 4458289576.33709
[2025-06-03 11:53:24] 2025-06-03 09:49:11,996 | INFO     | intersect: 4458289576.33709
[2025-06-03 11:53:24] 2025-06-03 09:49:11,997 | INFO     | chi2: 0.81637287199413
[2025-06-03 11:53:24] 2025-06-03 09:49:11,997 | INFO     | current chi2=0.81637287199413 (change=64.13394789155026 %)
[2025-06-03 11:53:24] 2025-06-03 09:49:11,998 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 11:53:24] 2025-06-03 09:49:11,999 | INFO     | sum of deviations: -5141643152.000001
[2025-06-03 11:53:24] 2025-06-03 09:49:11,999 | INFO     | mean x: 1748937998.5
[2025-06-03 11:53:24] 2025-06-03 09:49:11,999 | INFO     | mean y: 2474065.242424242
[2025-06-03 11:53:24] 2025-06-03 09:49:11,999 | INFO     | -- intersect: 3738530506.7085366
[2025-06-03 11:53:24] 2025-06-03 09:49:11,999 | INFO     | intersect: 3738530506.7085366
[2025-06-03 11:53:24] 2025-06-03 09:49:12,000 | INFO     | chi2: 0.7992981604809248
[2025-06-03 11:53:24] 2025-06-03 09:49:12,000 | INFO     | current chi2=0.7992981604809248 (change=2.0915334277947366 %)
[2025-06-03 11:53:24] 2025-06-03 09:49:12,000 | INFO     | left removable region: 20
[2025-06-03 11:53:24] 2025-06-03 09:49:12,000 | INFO     | sum of square deviations: 1719429448.0
[2025-06-03 11:53:24] 2025-06-03 09:49:12,001 | INFO     | sum of deviations: 5389577102.999999
[2025-06-03 11:53:24] 2025-06-03 09:49:12,002 | INFO     | mean x: 1748937968.0
[2025-06-03 11:53:24] 2025-06-03 09:49:12,002 | INFO     | mean y: 2486380.7231638418
[2025-06-03 11:53:24] 2025-06-03 09:49:12,002 | INFO     | -- intersect: -5479585615.812832
[2025-06-03 11:53:24] 2025-06-03 09:49:12,002 | INFO     | intersect: -5479585615.812832
[2025-06-03 11:53:24] 2025-06-03 09:49:12,002 | INFO     | chi2: 0.00027281194886043003
[2025-06-03 11:53:24] 2025-06-03 09:49:12,002 | INFO     | -- intersect: -5479585615.812832
[2025-06-03 11:53:24] 2025-06-03 09:49:12,003 | INFO     | current memory leak: 3.13 B/s (using 177 data points, chi2=0.00)
[2025-06-03 11:53:24] 2025-06-03 09:49:12,003 | INFO     | ..............................
[2025-06-03 11:53:24] 2025-06-03 09:49:12,003 | INFO     | . Timing measurements:
[2025-06-03 11:53:24] 2025-06-03 09:49:12,004 | INFO     | . get job = 0 s
[2025-06-03 11:53:24] 2025-06-03 09:49:12,004 | INFO     | . initial setup = 2 s
[2025-06-03 11:53:24] 2025-06-03 09:49:12,004 | INFO     | . payload setup = 13 s
[2025-06-03 11:53:24] 2025-06-03 09:49:12,004 | INFO     | . stage-in = 0 s
[2025-06-03 11:53:24] 2025-06-03 09:49:12,004 | INFO     | . payload execution = 12696 s
[2025-06-03 11:53:24] 2025-06-03 09:49:12,004 | INFO     | . stage-out = 3 s
[2025-06-03 11:53:24] 2025-06-03 09:49:12,004 | INFO     | . log creation = 1 s
[2025-06-03 11:53:24] 2025-06-03 09:49:12,004 | INFO     | ..............................
[2025-06-03 11:53:24] 2025-06-03 09:49:12,131 | INFO     | 
[2025-06-03 11:53:24] 2025-06-03 09:49:12,131 | INFO     | job summary report
[2025-06-03 11:53:24] 2025-06-03 09:49:12,131 | INFO     | --------------------------------------------------
[2025-06-03 11:53:24] 2025-06-03 09:49:12,131 | INFO     | PanDA job id: 6677385931
[2025-06-03 11:53:24] 2025-06-03 09:49:12,132 | INFO     | task id: 45006595
[2025-06-03 11:53:24] 2025-06-03 09:49:12,132 | INFO     | errors: (none)
[2025-06-03 11:53:24] 2025-06-03 09:49:12,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:53:24] 2025-06-03 09:49:12,132 | INFO     | pilot state: finished 
[2025-06-03 11:53:24] 2025-06-03 09:49:12,132 | INFO     | transexitcode: 0
[2025-06-03 11:53:24] 2025-06-03 09:49:12,132 | INFO     | exeerrorcode: 0
[2025-06-03 11:53:24] 2025-06-03 09:49:12,132 | INFO     | exeerrordiag: 
[2025-06-03 11:53:24] 2025-06-03 09:49:12,132 | INFO     | exitcode: 0
[2025-06-03 11:53:24] 2025-06-03 09:49:12,132 | INFO     | exitmsg: OK
[2025-06-03 11:53:24] 2025-06-03 09:49:12,133 | INFO     | cpuconsumptiontime: 48339 s
[2025-06-03 11:53:24] 2025-06-03 09:49:12,133 | INFO     | nevents: 400
[2025-06-03 11:53:24] 2025-06-03 09:49:12,133 | INFO     | neventsw: 0
[2025-06-03 11:53:24] 2025-06-03 09:49:12,133 | INFO     | pid: 10315
[2025-06-03 11:53:24] 2025-06-03 09:49:12,133 | INFO     | pgrp: 10315
[2025-06-03 11:53:24] 2025-06-03 09:49:12,133 | INFO     | corecount: 8
[2025-06-03 11:53:24] 2025-06-03 09:49:12,133 | INFO     | event service: False
[2025-06-03 11:53:24] 2025-06-03 09:49:12,133 | INFO     | sizes: {0: 2404349, 1: 2405034, 2: 2405233, 9: 2405439, 13: 2405467, 12714: 2435019, 12719: 2443960, 12720: 2444016, 12807: 2444186}
[2025-06-03 11:53:24] 2025-06-03 09:49:12,133 | INFO     | --------------------------------------------------
[2025-06-03 11:53:24] 2025-06-03 09:49:12,133 | INFO     | 
[2025-06-03 11:53:24] 2025-06-03 09:49:12,134 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 11:53:24] 2025-06-03 09:49:12,426 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,427 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,427 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:53:24] 2025-06-03 09:49:12,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,429 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:53:24] 2025-06-03 09:49:12,429 | INFO     | job 6677385931 has completed (purged errors)
[2025-06-03 11:53:24] 2025-06-03 09:49:12,429 | INFO     | overall cleanup function is called
[2025-06-03 11:53:24] 2025-06-03 09:49:13,063 | INFO     | PID=1724 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 11:53:24] 2025-06-03 09:49:13,063 | INFO     | .. there are 9 such processes running
[2025-06-03 11:53:24] 2025-06-03 09:49:13,438 | INFO     | --- collectZombieJob: --- 10, [10315]
[2025-06-03 11:53:24] 2025-06-03 09:49:13,438 | INFO     | zombie collector waiting for pid 10315
[2025-06-03 11:53:24] 2025-06-03 09:49:13,438 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:53:24] 2025-06-03 09:49:13,438 | INFO     | collected zombie processes
[2025-06-03 11:53:24] 2025-06-03 09:49:13,439 | INFO     | will attempt to kill all subprocesses of pid=10315
[2025-06-03 11:53:24] 2025-06-03 09:49:13,545 | INFO     | process IDs to be killed: [10315] (in reverse order)
[2025-06-03 11:53:24] 2025-06-03 09:49:13,879 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:53:24] 2025-06-03 09:49:13,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:53:24] 2025-06-03 09:49:13,883 | INFO     | did not find any defunct processes belonging to 10315
[2025-06-03 11:53:24] 2025-06-03 09:49:13,887 | INFO     | did not find any defunct processes belonging to 10315
[2025-06-03 11:53:24] 2025-06-03 09:49:13,887 | INFO     | ready for new job
[2025-06-03 11:53:24] 2025-06-03 09:49:13,887 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:53:24] 2025-06-03 09:49:13,889 | INFO     | **************************************
[2025-06-03 11:53:24] 2025-06-03 09:49:13,889 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:53:24] 2025-06-03 09:49:13,889 | INFO     | **************************************
[2025-06-03 11:53:24] 2025-06-03 09:49:13,889 | INFO     | 
[2025-06-03 11:53:24] 2025-06-03 09:49:13,890 | INFO     | pilot is running in a VM
[2025-06-03 11:53:24] 2025-06-03 09:49:13,890 | INFO     | architecture information:
[2025-06-03 11:53:24] 2025-06-03 09:49:13,894 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:53:24] 2025-06-03 09:49:13,964 | INFO     | cat /etc/os-release:
[2025-06-03 11:53:24] NAME="CentOS Linux"
[2025-06-03 11:53:24] VERSION="7 (Core)"
[2025-06-03 11:53:24] ID="centos"
[2025-06-03 11:53:24] ID_LIKE="rhel fedora"
[2025-06-03 11:53:24] VERSION_ID="7"
[2025-06-03 11:53:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:53:24] ANSI_COLOR="0;31"
[2025-06-03 11:53:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:53:24] HOME_URL="https://www.centos.org/"
[2025-06-03 11:53:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:53:24] 
[2025-06-03 11:53:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:53:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:53:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:53:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:53:24] 
[2025-06-03 11:53:24] 2025-06-03 09:49:13,965 | INFO     | **************************************
[2025-06-03 11:53:24] 2025-06-03 09:49:14,467 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 11:53:24] 2025-06-03 09:49:14,630 | INFO     | sufficient remaining disk space (496883466240 B)
[2025-06-03 11:53:24] 2025-06-03 09:49:14,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:53:24] 2025-06-03 09:49:14,630 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:53:24] 2025-06-03 09:49:14,630 | INFO     | update_server=False
[2025-06-03 11:53:24] 2025-06-03 09:49:14,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:53:24] 2025-06-03 09:49:15,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:53:24] 2025-06-03 09:49:15,070 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:53:24] 2025-06-03 09:49:15,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:53:24] 2025-06-03 09:49:15,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:53:24] 2025-06-03 09:49:15,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:53:24] 2025-06-03 09:49:15,072 | INFO     | aborting loop
[2025-06-03 11:53:24] 2025-06-03 09:49:15,288 | INFO     | all job control threads have been joined
[2025-06-03 11:53:24] 2025-06-03 09:49:15,410 | INFO     | all payload control threads have been joined
[2025-06-03 11:53:24] 2025-06-03 09:49:15,475 | INFO     | all data control threads have been joined
[2025-06-03 11:53:24] 2025-06-03 09:49:15,636 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:15,698 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:15,907 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:16,065 | INFO     | [job] validate thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:16,078 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:16,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:53:24] 2025-06-03 09:49:16,230 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:16,294 | INFO     | [job] control thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:16,356 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:16,417 | INFO     | [payload] control thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:16,481 | INFO     | [data] control thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:16,622 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:16,664 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:16,768 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:17,072 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:17,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:53:24] 2025-06-03 09:49:18,152 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:20,198 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:53:24] 2025-06-03 09:49:21,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725463574336)>', '<ExcThread(monitor, started 139725167892224)>']
[2025-06-03 11:53:24] 2025-06-03 09:49:22,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:53:24] 2025-06-03 09:49:22,111 | INFO     | [monitor] control thread has ended
[2025-06-03 11:53:24] 2025-06-03 09:49:26,719 | INFO     | all workflow threads have been joined
[2025-06-03 11:53:24] 2025-06-03 09:49:26,719 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:53:24] 2025-06-03 09:49:26,720 | INFO     | traces error code: 0
[2025-06-03 11:53:24] 2025-06-03 09:49:26,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:53:24] 2025-06-03 09:49:27,182 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:53:24] 2025-06-03 09:49:27,288 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:53:24] 2025-06-03 09:49:27,366 [wrapper] pilotpid: 1724
[2025-06-03 11:53:24] 2025-06-03 09:49:27,465 [wrapper] Pilot exit status: 0
[2025-06-03 11:53:24] 2025-06-03 09:49:27,959 [wrapper] pandaids: 6677385931
[2025-06-03 11:53:24] 2025-06-03 09:49:28,997 [wrapper] cleanup supervisor_pilot 27238 1726
[2025-06-03 11:53:24] 2025-06-03 09:49:29,050 [wrapper] Test setup, not cleaning
[2025-06-03 11:53:24] 2025-06-03 09:49:29,157 [wrapper] apfmon messages muted
[2025-06-03 11:53:24] 2025-06-03 09:49:29,250 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:53:24] 2025-06-03 09:49:29,360 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:53:24]  *** Error codes and diagnostics ***
[2025-06-03 11:53:24]     "exeErrorCode": 0,
[2025-06-03 11:53:24]     "exeErrorDiag": "",
[2025-06-03 11:53:24]     "pilotErrorCode": 0,
[2025-06-03 11:53:24]     "pilotErrorDiag": "",
[2025-06-03 11:53:24]  *** Listing of results directory ***
[2025-06-03 11:53:24] total 392780
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:40 pilot3.tar.gz
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:02 queuedata.json
[2025-06-03 11:53:24] -rwx------. 1 boinc boinc     37140 Jun  2 19:03 runpilot2-wrapper.sh
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc       100 Jun  3 07:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:53:24] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 07:17 run_atlas
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc       105 Jun  3 07:17 job.xml
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc      6391 Jun  3 07:17 init_data.xml
[2025-06-03 11:53:24] -rw-r--r--. 2 boinc boinc 218133585 Jun  3 07:17 EVNT.45006593._000190.pool.root.1
[2025-06-03 11:53:24] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:17 start_atlas.sh
[2025-06-03 11:53:24] drwxrwx--x. 2 boinc boinc        68 Jun  3 07:17 shared
[2025-06-03 11:53:24] -rw-r--r--. 2 boinc boinc    508875 Jun  3 07:17 input.tar.gz
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc         0 Jun  3 07:17 boinc_lockfile
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc      2521 Jun  3 08:15 pandaJob.out
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc    988073 Jun  3 08:15 agis_schedconf.cvmfs.json
[2025-06-03 11:53:24] drwx------. 4 boinc boinc      4096 Jun  3 08:15 pilot3
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc 177267049 Jun  3 11:46 HITS.45006595._004738.pool.root.1
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc       531 Jun  3 11:46 boinc_task_state.xml
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc      1015 Jun  3 11:47 memory_monitor_summary.json
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc   1603667 Jun  3 11:47 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc    373363 Jun  3 11:47 log.45006595._004738.job.log.tgz.1
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc        95 Jun  3 11:48 pilot_heartbeat.json
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc      7676 Jun  3 11:49 heartbeat.json
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc      4416 Jun  3 11:49 pilotlog.txt
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc   1116623 Jun  3 11:49 log.45006595._004738.job.log.1
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc       357 Jun  3 11:49 output.list
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc       620 Jun  3 11:49 runtime_log
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc   1505280 Jun  3 11:49 result.tar.gz
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc      8659 Jun  3 11:49 runtime_log.err
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc       656 Jun  3 11:49 ouIKDm5jNg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDsVKDmeztfDo.diag
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc      8192 Jun  3 11:53 boinc_mmap_file
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc        28 Jun  3 11:53 wrapper_checkpoint.txt
[2025-06-03 11:53:24] -rw-r--r--. 1 boinc boinc     20554 Jun  3 11:53 stderr.txt
[2025-06-03 11:53:24] HITS file was successfully produced:
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc 177267049 Jun  3 11:46 shared/HITS.pool.root.1
[2025-06-03 11:53:24]  *** Contents of shared directory: ***
[2025-06-03 11:53:24] total 388128
[2025-06-03 11:53:24] -rw-r--r--. 2 boinc boinc 218133585 Jun  3 07:17 ATLAS.root_0
[2025-06-03 11:53:24] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:17 start_atlas.sh
[2025-06-03 11:53:24] -rw-r--r--. 2 boinc boinc    508875 Jun  3 07:17 input.tar.gz
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc 177267049 Jun  3 11:46 HITS.pool.root.1
[2025-06-03 11:53:24] -rw-------. 1 boinc boinc   1505280 Jun  3 11:49 result.tar.gz
11:53:26 (32725): run_atlas exited; CPU time 48503.103077
11:53:26 (32725): called boinc_finish(0)

</stderr_txt>
]]>

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