Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:41:40 (980302): wrapper (7.7.26015): starting
04:41:40 (980302): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 04:41:40] Arguments: --nthreads 3
[2025-06-05 04:41:40] Threads: 3
[2025-06-05 04:41:40] Checking for CVMFS
[2025-06-05 04:41:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:41:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:41:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:41:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:41:41] 2.12.7.0 68668 6882 47756 146802 0 56 6326273 10240001 0 130560 0 2422577 99.982 1549535 1402 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2025-06-05 04:41:41] CVMFS is ok
[2025-06-05 04:41:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:41:41] Checking for apptainer binary...
[2025-06-05 04:41:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:41:41] Running /usr/bin/apptainer --version
[2025-06-05 04:41:41] apptainer version 1.3.4
[2025-06-05 04:41:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:41:41] ahanlst03
[2025-06-05 04:41:41] apptainer works
[2025-06-05 04:41:41] Set ATHENA_PROC_NUMBER=3
[2025-06-05 04:41:41] Set ATHENA_CORE_NUMBER=3
[2025-06-05 04:41:41] Starting ATLAS job with PandaID=6677391599
[2025-06-05 04:41:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:28:02]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:28:02] 2025-06-05 07:27:50,072 | INFO     | extracted standard info from prmon json
[2025-06-05 09:28:02] 2025-06-05 07:27:50,072 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 09:28:02] 2025-06-05 07:27:50,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:28:02] 2025-06-05 07:27:50,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:28:02] 2025-06-05 07:27:50,073 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:28:02] 2025-06-05 07:27:50,078 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:28:02] 2025-06-05 07:27:50,079 | INFO     | sum of square deviations: 6880054580.0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,082 | INFO     | sum of deviations: -78389272867.00002
[2025-06-05 09:28:02] 2025-06-05 07:27:50,082 | INFO     | mean x: 1749099882.0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,082 | INFO     | mean y: 2327669.060498221
[2025-06-05 09:28:02] 2025-06-05 07:27:50,082 | INFO     | -- intersect: 19931045723.17447
[2025-06-05 09:28:02] 2025-06-05 07:27:50,082 | INFO     | intersect: 19931045723.17447
[2025-06-05 09:28:02] 2025-06-05 07:27:50,083 | INFO     | chi2: 2.630810278889454
[2025-06-05 09:28:02] 2025-06-05 07:27:50,083 | INFO     | sum of square deviations: 6519285025.0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,086 | INFO     | sum of deviations: -59443573440.49998
[2025-06-05 09:28:02] 2025-06-05 07:27:50,086 | INFO     | mean x: 1749099729.5
[2025-06-05 09:28:02] 2025-06-05 07:27:50,086 | INFO     | mean y: 2335571.5833333335
[2025-06-05 09:28:02] 2025-06-05 07:27:50,086 | INFO     | -- intersect: 15950823454.315826
[2025-06-05 09:28:02] 2025-06-05 07:27:50,086 | INFO     | intersect: 15950823454.315826
[2025-06-05 09:28:02] 2025-06-05 07:27:50,087 | INFO     | chi2: 1.8330174026268045
[2025-06-05 09:28:02] 2025-06-05 07:27:50,087 | INFO     | current chi2=1.8330174026268045 (change=30.324987045414105 %)
[2025-06-05 09:28:02] 2025-06-05 07:27:50,087 | INFO     | sum of square deviations: 6171352920.0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,090 | INFO     | sum of deviations: -58179464736.99999
[2025-06-05 09:28:02] 2025-06-05 07:27:50,090 | INFO     | mean x: 1749099577.0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,090 | INFO     | mean y: 2336125.701107011
[2025-06-05 09:28:02] 2025-06-05 07:27:50,090 | INFO     | -- intersect: 16491698908.987385
[2025-06-05 09:28:02] 2025-06-05 07:27:50,091 | INFO     | intersect: 16491698908.987385
[2025-06-05 09:28:02] 2025-06-05 07:27:50,092 | INFO     | chi2: 1.8287510629116281
[2025-06-05 09:28:02] 2025-06-05 07:27:50,092 | INFO     | current chi2=1.8287510629116281 (change=0.23274954777092893 %)
[2025-06-05 09:28:02] 2025-06-05 07:27:50,092 | INFO     | right removable region: 270
[2025-06-05 09:28:02] 2025-06-05 07:27:50,093 | INFO     | sum of square deviations: 6519285025.0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,098 | INFO     | sum of deviations: -107244337869.5
[2025-06-05 09:28:02] 2025-06-05 07:27:50,098 | INFO     | mean x: 1749100034.5
[2025-06-05 09:28:02] 2025-06-05 07:27:50,099 | INFO     | mean y: 2339707.742753623
[2025-06-05 09:28:02] 2025-06-05 07:27:50,099 | INFO     | -- intersect: 28775598485.06889
[2025-06-05 09:28:02] 2025-06-05 07:27:50,099 | INFO     | intersect: 28775598485.06889
[2025-06-05 09:28:02] 2025-06-05 07:27:50,100 | INFO     | chi2: 1.3601103182046834
[2025-06-05 09:28:02] 2025-06-05 07:27:50,100 | INFO     | current chi2=1.3601103182046834 (change=48.300706853752004 %)
[2025-06-05 09:28:02] 2025-06-05 07:27:50,101 | INFO     | sum of square deviations: 6171352920.0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,105 | INFO     | sum of deviations: -93699197376.0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,106 | INFO     | mean x: 1749100187.0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,106 | INFO     | mean y: 2333764.007380074
[2025-06-05 09:28:02] 2025-06-05 07:27:50,106 | INFO     | -- intersect: 26558793227.050293
[2025-06-05 09:28:02] 2025-06-05 07:27:50,106 | INFO     | intersect: 26558793227.050293
[2025-06-05 09:28:02] 2025-06-05 07:27:50,107 | INFO     | chi2: 1.3254987333748334
[2025-06-05 09:28:02] 2025-06-05 07:27:50,107 | INFO     | current chi2=1.3254987333748334 (change=2.544763050951382 %)
[2025-06-05 09:28:02] 2025-06-05 07:27:50,107 | INFO     | left removable region: 20
[2025-06-05 09:28:02] 2025-06-05 07:27:50,108 | INFO     | sum of square deviations: 4844974562.5
[2025-06-05 09:28:02] 2025-06-05 07:27:50,111 | INFO     | sum of deviations: -44729849359.0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,112 | INFO     | mean x: 1749100156.5
[2025-06-05 09:28:02] 2025-06-05 07:27:50,112 | INFO     | mean y: 2328461.256
[2025-06-05 09:28:02] 2025-06-05 07:27:50,112 | INFO     | -- intersect: 16150398075.408556
[2025-06-05 09:28:02] 2025-06-05 07:27:50,112 | INFO     | intersect: 16150398075.408556
[2025-06-05 09:28:02] 2025-06-05 07:27:50,113 | INFO     | chi2: 0.3808385949612407
[2025-06-05 09:28:02] 2025-06-05 07:27:50,113 | INFO     | -- intersect: 16150398075.408556
[2025-06-05 09:28:02] 2025-06-05 07:27:50,113 | INFO     | current memory leak: -9.23 B/s (using 250 data points, chi2=0.38)
[2025-06-05 09:28:02] 2025-06-05 07:27:50,114 | INFO     | ..............................
[2025-06-05 09:28:02] 2025-06-05 07:27:50,114 | INFO     | . Timing measurements:
[2025-06-05 09:28:02] 2025-06-05 07:27:50,115 | INFO     | . get job = 0 s
[2025-06-05 09:28:02] 2025-06-05 07:27:50,115 | INFO     | . initial setup = 2 s
[2025-06-05 09:28:02] 2025-06-05 07:27:50,115 | INFO     | . payload setup = 7 s
[2025-06-05 09:28:02] 2025-06-05 07:27:50,115 | INFO     | . stage-in = 0 s
[2025-06-05 09:28:02] 2025-06-05 07:27:50,115 | INFO     | . payload execution = 17107 s
[2025-06-05 09:28:02] 2025-06-05 07:27:50,115 | INFO     | . stage-out = 6 s
[2025-06-05 09:28:02] 2025-06-05 07:27:50,116 | INFO     | . log creation = 0 s
[2025-06-05 09:28:02] 2025-06-05 07:27:50,116 | INFO     | ..............................
[2025-06-05 09:28:02] 2025-06-05 07:27:50,250 | INFO     | 
[2025-06-05 09:28:02] 2025-06-05 07:27:50,250 | INFO     | job summary report
[2025-06-05 09:28:02] 2025-06-05 07:27:50,250 | INFO     | --------------------------------------------------
[2025-06-05 09:28:02] 2025-06-05 07:27:50,251 | INFO     | PanDA job id: 6677391599
[2025-06-05 09:28:02] 2025-06-05 07:27:50,251 | INFO     | task id: 45006595
[2025-06-05 09:28:02] 2025-06-05 07:27:50,251 | INFO     | errors: (none)
[2025-06-05 09:28:02] 2025-06-05 07:27:50,251 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:28:02] 2025-06-05 07:27:50,251 | INFO     | pilot state: finished 
[2025-06-05 09:28:02] 2025-06-05 07:27:50,251 | INFO     | transexitcode: 0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,251 | INFO     | exeerrorcode: 0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,251 | INFO     | exeerrordiag: 
[2025-06-05 09:28:02] 2025-06-05 07:27:50,252 | INFO     | exitcode: 0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,252 | INFO     | exitmsg: OK
[2025-06-05 09:28:02] 2025-06-05 07:27:50,252 | INFO     | cpuconsumptiontime: 50585 s
[2025-06-05 09:28:02] 2025-06-05 07:27:50,252 | INFO     | nevents: 400
[2025-06-05 09:28:02] 2025-06-05 07:27:50,252 | INFO     | neventsw: 0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,252 | INFO     | pid: 990308
[2025-06-05 09:28:02] 2025-06-05 07:27:50,252 | INFO     | pgrp: 990308
[2025-06-05 09:28:02] 2025-06-05 07:27:50,252 | INFO     | corecount: 3
[2025-06-05 09:28:02] 2025-06-05 07:27:50,252 | INFO     | event service: False
[2025-06-05 09:28:02] 2025-06-05 07:27:50,253 | INFO     | sizes: {0: 2396507, 1: 2397370, 2: 2397370, 6: 2397604, 12: 2397632, 17118: 2429371, 17119: 2429498, 17126: 2438509, 17129: 2438565, 17141: 2438735}
[2025-06-05 09:28:02] 2025-06-05 07:27:50,253 | INFO     | --------------------------------------------------
[2025-06-05 09:28:02] 2025-06-05 07:27:50,253 | INFO     | 
[2025-06-05 09:28:02] 2025-06-05 07:27:50,253 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-05 09:28:02] 2025-06-05 07:27:50,277 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,278 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,278 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,278 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,278 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,279 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,280 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,280 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,280 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,280 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:28:02] 2025-06-05 07:27:50,280 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,280 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:28:02] 2025-06-05 07:27:50,281 | INFO     | job 6677391599 has completed (purged errors)
[2025-06-05 09:28:02] 2025-06-05 07:27:50,281 | INFO     | overall cleanup function is called
[2025-06-05 09:28:02] 2025-06-05 07:27:51,289 | INFO     | --- collectZombieJob: --- 10, [990308]
[2025-06-05 09:28:02] 2025-06-05 07:27:51,290 | INFO     | zombie collector waiting for pid 990308
[2025-06-05 09:28:02] 2025-06-05 07:27:51,290 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:28:02] 2025-06-05 07:27:51,291 | INFO     | collected zombie processes
[2025-06-05 09:28:02] 2025-06-05 07:27:51,291 | INFO     | will attempt to kill all subprocesses of pid=990308
[2025-06-05 09:28:02] 2025-06-05 07:27:51,427 | INFO     | process IDs to be killed: [990308] (in reverse order)
[2025-06-05 09:28:02] 2025-06-05 07:27:51,485 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:28:02] 2025-06-05 07:27:51,486 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:28:02] 2025-06-05 07:27:51,490 | INFO     | did not find any defunct processes belonging to 990308
[2025-06-05 09:28:02] 2025-06-05 07:27:51,498 | INFO     | did not find any defunct processes belonging to 990308
[2025-06-05 09:28:02] 2025-06-05 07:27:51,498 | INFO     | ready for new job
[2025-06-05 09:28:02] 2025-06-05 07:27:51,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:28:02] 2025-06-05 07:27:51,502 | INFO     | **************************************
[2025-06-05 09:28:02] 2025-06-05 07:27:51,502 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:28:02] 2025-06-05 07:27:51,502 | INFO     | **************************************
[2025-06-05 09:28:02] 2025-06-05 07:27:51,502 | INFO     | 
[2025-06-05 09:28:02] 2025-06-05 07:27:51,503 | INFO     | architecture information:
[2025-06-05 09:28:02] 2025-06-05 07:27:51,504 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:28:02] 2025-06-05 07:27:51,523 | INFO     | cat /etc/os-release:
[2025-06-05 09:28:02] NAME="CentOS Linux"
[2025-06-05 09:28:02] VERSION="7 (Core)"
[2025-06-05 09:28:02] ID="centos"
[2025-06-05 09:28:02] ID_LIKE="rhel fedora"
[2025-06-05 09:28:02] VERSION_ID="7"
[2025-06-05 09:28:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:28:02] ANSI_COLOR="0;31"
[2025-06-05 09:28:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:28:02] HOME_URL="https://www.centos.org/"
[2025-06-05 09:28:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:28:02] 
[2025-06-05 09:28:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:28:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:28:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:28:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:28:02] 
[2025-06-05 09:28:02] 2025-06-05 07:27:51,523 | INFO     | **************************************
[2025-06-05 09:28:02] 2025-06-05 07:27:51,599 | INFO     | PID=983890 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 09:28:02] 2025-06-05 07:27:52,027 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-05 09:28:02] 2025-06-05 07:27:52,051 | INFO     | sufficient remaining disk space (33589035008 B)
[2025-06-05 09:28:02] 2025-06-05 07:27:52,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:28:02] 2025-06-05 07:27:52,053 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:28:02] 2025-06-05 07:27:52,053 | INFO     | update_server=False
[2025-06-05 09:28:02] 2025-06-05 07:27:52,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:28:02] 2025-06-05 07:27:52,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:28:02] 2025-06-05 07:27:52,054 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 09:28:02] 2025-06-05 07:27:52,054 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:28:02] 2025-06-05 07:27:52,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:28:02] 2025-06-05 07:27:52,055 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:28:02] 2025-06-05 07:27:52,391 | INFO     | all data control threads have been joined
[2025-06-05 09:28:02] 2025-06-05 07:27:52,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:28:02] 2025-06-05 07:27:52,826 | INFO     | aborting loop
[2025-06-05 09:28:02] 2025-06-05 07:27:53,000 | INFO     | all payload control threads have been joined
[2025-06-05 09:28:02] 2025-06-05 07:27:53,059 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:53,060 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:53,107 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:53,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:28:02] 2025-06-05 07:27:53,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:28:02] 2025-06-05 07:27:53,222 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:53,234 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:53,397 | INFO     | [data] control thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:53,487 | INFO     | all job control threads have been joined
[2025-06-05 09:28:02] 2025-06-05 07:27:53,831 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:53,845 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:54,006 | INFO     | [payload] control thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:54,018 | INFO     | [job] validate thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:54,063 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:54,311 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:54,493 | INFO     | [job] control thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:54,580 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:55,174 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:57,188 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:28:02] 2025-06-05 07:27:57,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005438396224)>', '<ExcThread(monitor, started 140004516947712)>']
[2025-06-05 09:28:02] 2025-06-05 07:27:58,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:28:02] 2025-06-05 07:27:58,082 | INFO     | [monitor] control thread has ended
[2025-06-05 09:28:02] 2025-06-05 07:28:02,439 | INFO     | all workflow threads have been joined
[2025-06-05 09:28:02] 2025-06-05 07:28:02,439 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:28:02] 2025-06-05 07:28:02,440 | INFO     | traces error code: 0
[2025-06-05 09:28:02] 2025-06-05 07:28:02,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:28:02] 2025-06-05 07:28:02,635 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:28:02] 2025-06-05 07:28:02,639 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:28:02] 2025-06-05 07:28:02,642 [wrapper] pilotpid: 983890
[2025-06-05 09:28:02] 2025-06-05 07:28:02,645 [wrapper] Pilot exit status: 0
[2025-06-05 09:28:02] 2025-06-05 07:28:02,657 [wrapper] pandaids: 6677391599
[2025-06-05 09:28:02] 2025-06-05 07:28:02,684 [wrapper] cleanup supervisor_pilot 1019180 983891
[2025-06-05 09:28:02] 2025-06-05 07:28:02,688 [wrapper] Test setup, not cleaning
[2025-06-05 09:28:02] 2025-06-05 07:28:02,691 [wrapper] apfmon messages muted
[2025-06-05 09:28:02] 2025-06-05 07:28:02,695 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:28:02] 2025-06-05 07:28:02,698 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:28:02]  *** Error codes and diagnostics ***
[2025-06-05 09:28:02]     "exeErrorCode": 0,
[2025-06-05 09:28:02]     "exeErrorDiag": "",
[2025-06-05 09:28:02]     "pilotErrorCode": 0,
[2025-06-05 09:28:02]     "pilotErrorDiag": "",
[2025-06-05 09:28:02]  *** Listing of results directory ***
[2025-06-05 09:28:02] total 392844
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc      5111 Jun  2 20:22 queuedata.json
[2025-06-05 09:28:02] -rwx------ 1 boinc boinc     37140 Jun  2 20:24 runpilot2-wrapper.sh
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc       100 Jun  5 04:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:28:02] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 04:41 run_atlas
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc       105 Jun  5 04:41 job.xml
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc      9392 Jun  5 04:41 init_data.xml
[2025-06-05 09:28:02] -rw-r--r-- 2 boinc boinc 215869315 Jun  5 04:41 EVNT.45006593._000292.pool.root.1
[2025-06-05 09:28:02] drwxrwx--x 2 boinc boinc      4096 Jun  5 04:41 shared
[2025-06-05 09:28:02] -rw-r--r-- 2 boinc boinc    508875 Jun  5 04:41 input.tar.gz
[2025-06-05 09:28:02] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:41 start_atlas.sh
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc         0 Jun  5 04:41 boinc_lockfile
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc      2521 Jun  5 04:41 pandaJob.out
[2025-06-05 09:28:02] -rw------- 1 boinc boinc    987109 Jun  5 04:41 agis_schedconf.cvmfs.json
[2025-06-05 09:28:02] drwx------ 4 boinc boinc      4096 Jun  5 04:41 pilot3
[2025-06-05 09:28:02] -rw------- 1 boinc boinc 178798711 Jun  5 09:26 HITS.45006595._007283.pool.root.1
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc       530 Jun  5 09:26 boinc_task_state.xml
[2025-06-05 09:28:02] -rw------- 1 boinc boinc      1012 Jun  5 09:27 memory_monitor_summary.json
[2025-06-05 09:28:02] -rw------- 1 boinc boinc   1598969 Jun  5 09:27 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:28:02] -rw------- 1 boinc boinc    331339 Jun  5 09:27 log.45006595._007283.job.log.tgz.1
[2025-06-05 09:28:02] -rw------- 1 boinc boinc        95 Jun  5 09:27 pilot_heartbeat.json
[2025-06-05 09:28:02] -rw------- 1 boinc boinc      7648 Jun  5 09:27 heartbeat.json
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc        28 Jun  5 09:27 wrapper_checkpoint.txt
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc      8192 Jun  5 09:27 boinc_mmap_file
[2025-06-05 09:28:02] -rw------- 1 boinc boinc      4801 Jun  5 09:28 pilotlog.txt
[2025-06-05 09:28:02] -rw------- 1 boinc boinc   1552182 Jun  5 09:28 log.45006595._007283.job.log.1
[2025-06-05 09:28:02] -rw------- 1 boinc boinc       357 Jun  5 09:28 output.list
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc       620 Jun  5 09:28 runtime_log
[2025-06-05 09:28:02] -rw------- 1 boinc boinc   1904640 Jun  5 09:28 result.tar.gz
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc      8766 Jun  5 09:28 runtime_log.err
[2025-06-05 09:28:02] -rw------- 1 boinc boinc       652 Jun  5 09:28 8RhKDma0Og7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdzfKDmH2lJpn.diag
[2025-06-05 09:28:02] -rw-r--r-- 1 boinc boinc     20632 Jun  5 09:28 stderr.txt
[2025-06-05 09:28:02] HITS file was successfully produced:
[2025-06-05 09:28:02] -rw------- 1 boinc boinc 178798711 Jun  5 09:26 shared/HITS.pool.root.1
[2025-06-05 09:28:02]  *** Contents of shared directory: ***
[2025-06-05 09:28:02] total 387808
[2025-06-05 09:28:02] -rw-r--r-- 2 boinc boinc 215869315 Jun  5 04:41 ATLAS.root_0
[2025-06-05 09:28:02] -rw-r--r-- 2 boinc boinc    508875 Jun  5 04:41 input.tar.gz
[2025-06-05 09:28:02] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:41 start_atlas.sh
[2025-06-05 09:28:02] -rw------- 1 boinc boinc 178798711 Jun  5 09:26 HITS.pool.root.1
[2025-06-05 09:28:02] -rw------- 1 boinc boinc   1904640 Jun  5 09:28 result.tar.gz
09:28:04 (980302): run_atlas exited; CPU time 50663.534694
09:28:04 (980302): called boinc_finish(0)

</stderr_txt>
]]>

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