Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:50:26 (12107): wrapper (7.7.26015): starting
04:50:26 (12107): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 04:50:26] Arguments: --nthreads 8
[2025-06-03 04:50:26] Threads: 8
[2025-06-03 04:50:26] Checking for CVMFS
[2025-06-03 04:50:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 04:50:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 04:50:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 04:50:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 04:50:28] 2.11.2.0 16765 31205 90908 146724 0 155 23510073 25165824 4353 130560 0 14644466 99.783 18010460 2021 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 04:50:28] CVMFS is ok
[2025-06-03 04:50:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:50:28] Checking for apptainer binary...
[2025-06-03 04:50:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 04:50:28] Running /usr/bin/apptainer --version
[2025-06-03 04:50:28] apptainer version 1.3.2-1.el7
[2025-06-03 04:50:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:50:29] cg-vwn404.simple-grid.lan
[2025-06-03 04:50:29] apptainer works
[2025-06-03 04:50:29] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:50:29] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:50:29] Starting ATLAS job with PandaID=6677391498
[2025-06-03 04:50:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 09:17:45]  *** The last 200 lines of the pilot log: ***
[2025-06-03 09:17:46] 2025-06-03 06:23:11,895 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677391498/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:17:46] 2025-06-03 06:23:11,896 | INFO     | extracted standard info from prmon json
[2025-06-03 09:17:46] 2025-06-03 06:23:11,896 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:17:46] 2025-06-03 06:23:11,896 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:17:46] 2025-06-03 06:23:11,896 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:17:46] 2025-06-03 06:23:11,896 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:17:46] 2025-06-03 06:23:11,901 | INFO     | fitting pss+swap vs Time
[2025-06-03 09:17:46] 2025-06-03 06:23:11,901 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 09:17:46] 2025-06-03 06:23:11,903 | INFO     | sum of deviations: -50258114354.00001
[2025-06-03 09:17:46] 2025-06-03 06:23:11,903 | INFO     | mean x: 1748925397.0
[2025-06-03 09:17:46] 2025-06-03 06:23:11,903 | INFO     | mean y: 2552098.61352657
[2025-06-03 09:17:46] 2025-06-03 06:23:11,903 | INFO     | -- intersect: 31961917692.02935
[2025-06-03 09:17:46] 2025-06-03 06:23:11,903 | INFO     | intersect: 31961917692.02935
[2025-06-03 09:17:46] 2025-06-03 06:23:11,904 | INFO     | chi2: 2.681311685493622
[2025-06-03 09:17:46] 2025-06-03 06:23:11,904 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 09:17:46] 2025-06-03 06:23:11,906 | INFO     | sum of deviations: -34489611151.50002
[2025-06-03 09:17:46] 2025-06-03 06:23:11,906 | INFO     | mean x: 1748925244.5
[2025-06-03 09:17:46] 2025-06-03 06:23:11,906 | INFO     | mean y: 2564252.717821782
[2025-06-03 09:17:46] 2025-06-03 06:23:11,906 | INFO     | -- intersect: 23603958293.28354
[2025-06-03 09:17:46] 2025-06-03 06:23:11,906 | INFO     | intersect: 23603958293.28354
[2025-06-03 09:17:46] 2025-06-03 06:23:11,906 | INFO     | chi2: 1.9172386720361252
[2025-06-03 09:17:46] 2025-06-03 06:23:11,907 | INFO     | current chi2=1.9172386720361252 (change=28.496240015335367 %)
[2025-06-03 09:17:46] 2025-06-03 06:23:11,907 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 09:17:46] 2025-06-03 06:23:11,908 | INFO     | sum of deviations: -32437499872.999996
[2025-06-03 09:17:46] 2025-06-03 06:23:11,909 | INFO     | mean x: 1748925092.0
[2025-06-03 09:17:46] 2025-06-03 06:23:11,909 | INFO     | mean y: 2565943.609137056
[2025-06-03 09:17:46] 2025-06-03 06:23:11,909 | INFO     | -- intersect: 23933115404.001904
[2025-06-03 09:17:46] 2025-06-03 06:23:11,909 | INFO     | intersect: 23933115404.001904
[2025-06-03 09:17:46] 2025-06-03 06:23:11,909 | INFO     | chi2: 1.9160576820469004
[2025-06-03 09:17:46] 2025-06-03 06:23:11,909 | INFO     | current chi2=1.9160576820469004 (change=0.06159848569977761 %)
[2025-06-03 09:17:46] 2025-06-03 06:23:11,910 | INFO     | right removable region: 196
[2025-06-03 09:17:46] 2025-06-03 06:23:11,910 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 09:17:46] 2025-06-03 06:23:11,911 | INFO     | sum of deviations: -86892164615.0
[2025-06-03 09:17:46] 2025-06-03 06:23:11,912 | INFO     | mean x: 1748925549.5
[2025-06-03 09:17:46] 2025-06-03 06:23:11,912 | INFO     | mean y: 2580562.7524752477
[2025-06-03 09:17:46] 2025-06-03 06:23:11,912 | INFO     | -- intersect: 59463284968.744736
[2025-06-03 09:17:46] 2025-06-03 06:23:11,912 | INFO     | intersect: 59463284968.744736
[2025-06-03 09:17:46] 2025-06-03 06:23:11,912 | INFO     | chi2: 1.0076281026427425
[2025-06-03 09:17:46] 2025-06-03 06:23:11,912 | INFO     | current chi2=1.0076281026427425 (change=62.42032927040181 %)
[2025-06-03 09:17:46] 2025-06-03 06:23:11,913 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 09:17:46] 2025-06-03 06:23:11,914 | INFO     | sum of deviations: -86762023616.0
[2025-06-03 09:17:46] 2025-06-03 06:23:11,914 | INFO     | mean x: 1748925702.0
[2025-06-03 09:17:46] 2025-06-03 06:23:11,914 | INFO     | mean y: 2580411.507614213
[2025-06-03 09:17:46] 2025-06-03 06:23:11,915 | INFO     | -- intersect: 64010707724.840004
[2025-06-03 09:17:46] 2025-06-03 06:23:11,915 | INFO     | intersect: 64010707724.840004
[2025-06-03 09:17:46] 2025-06-03 06:23:11,915 | INFO     | chi2: 0.9733276183924948
[2025-06-03 09:17:46] 2025-06-03 06:23:11,915 | INFO     | current chi2=0.9733276183924948 (change=3.4040817401069465 %)
[2025-06-03 09:17:46] 2025-06-03 06:23:11,915 | INFO     | left removable region: 20
[2025-06-03 09:17:46] 2025-06-03 06:23:11,916 | INFO     | sum of square deviations: 1690450300.0
[2025-06-03 09:17:46] 2025-06-03 06:23:11,917 | INFO     | sum of deviations: -59653355521.0
[2025-06-03 09:17:46] 2025-06-03 06:23:11,917 | INFO     | mean x: 1748925671.5
[2025-06-03 09:17:46] 2025-06-03 06:23:11,917 | INFO     | mean y: 2589155.6931818184
[2025-06-03 09:17:46] 2025-06-03 06:23:11,917 | INFO     | -- intersect: 61719449368.49752
[2025-06-03 09:17:46] 2025-06-03 06:23:11,917 | INFO     | intersect: 61719449368.49752
[2025-06-03 09:17:46] 2025-06-03 06:23:11,918 | INFO     | chi2: 0.16792036962848603
[2025-06-03 09:17:46] 2025-06-03 06:23:11,918 | INFO     | -- intersect: 61719449368.49752
[2025-06-03 09:17:46] 2025-06-03 06:23:11,918 | INFO     | current memory leak: -35.29 B/s (using 176 data points, chi2=0.17)
[2025-06-03 09:17:46] 2025-06-03 06:23:11,919 | INFO     | ..............................
[2025-06-03 09:17:46] 2025-06-03 06:23:11,919 | INFO     | . Timing measurements:
[2025-06-03 09:17:46] 2025-06-03 06:23:11,919 | INFO     | . get job = 0 s
[2025-06-03 09:17:46] 2025-06-03 06:23:11,919 | INFO     | . initial setup = 2 s
[2025-06-03 09:17:46] 2025-06-03 06:23:11,919 | INFO     | . payload setup = 16 s
[2025-06-03 09:17:46] 2025-06-03 06:23:11,919 | INFO     | . stage-in = 0 s
[2025-06-03 09:17:46] 2025-06-03 06:23:11,919 | INFO     | . payload execution = 12598 s
[2025-06-03 09:17:46] 2025-06-03 06:23:11,919 | INFO     | . stage-out = 4 s
[2025-06-03 09:17:46] 2025-06-03 06:23:11,919 | INFO     | . log creation = 1 s
[2025-06-03 09:17:46] 2025-06-03 06:23:11,919 | INFO     | ..............................
[2025-06-03 09:17:46] 2025-06-03 06:23:12,038 | INFO     | 
[2025-06-03 09:17:46] 2025-06-03 06:23:12,038 | INFO     | job summary report
[2025-06-03 09:17:46] 2025-06-03 06:23:12,038 | INFO     | --------------------------------------------------
[2025-06-03 09:17:46] 2025-06-03 06:23:12,045 | INFO     | PanDA job id: 6677391498
[2025-06-03 09:17:46] 2025-06-03 06:23:12,045 | INFO     | task id: 45006595
[2025-06-03 09:17:46] 2025-06-03 06:23:12,045 | INFO     | errors: (none)
[2025-06-03 09:17:46] 2025-06-03 06:23:12,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 09:17:46] 2025-06-03 06:23:12,046 | INFO     | pilot state: finished 
[2025-06-03 09:17:46] 2025-06-03 06:23:12,046 | INFO     | transexitcode: 0
[2025-06-03 09:17:46] 2025-06-03 06:23:12,046 | INFO     | exeerrorcode: 0
[2025-06-03 09:17:46] 2025-06-03 06:23:12,046 | INFO     | exeerrordiag: 
[2025-06-03 09:17:46] 2025-06-03 06:23:12,046 | INFO     | exitcode: 0
[2025-06-03 09:17:46] 2025-06-03 06:23:12,046 | INFO     | exitmsg: OK
[2025-06-03 09:17:46] 2025-06-03 06:23:12,046 | INFO     | cpuconsumptiontime: 47962 s
[2025-06-03 09:17:46] 2025-06-03 06:23:12,046 | INFO     | nevents: 400
[2025-06-03 09:17:46] 2025-06-03 06:23:12,046 | INFO     | neventsw: 0
[2025-06-03 09:17:46] 2025-06-03 06:23:12,046 | INFO     | pid: 24363
[2025-06-03 09:17:46] 2025-06-03 06:23:12,046 | INFO     | pgrp: 24363
[2025-06-03 09:17:46] 2025-06-03 06:23:12,047 | INFO     | corecount: 8
[2025-06-03 09:17:46] 2025-06-03 06:23:12,047 | INFO     | event service: False
[2025-06-03 09:17:46] 2025-06-03 06:23:12,047 | INFO     | sizes: {0: 2405177, 1: 2405177, 9: 2405411, 12: 2405439, 12619: 2434655, 12624: 2443596, 12627: 2443780, 12720: 2443950}
[2025-06-03 09:17:46] 2025-06-03 06:23:12,047 | INFO     | --------------------------------------------------
[2025-06-03 09:17:46] 2025-06-03 06:23:12,047 | INFO     | 
[2025-06-03 09:17:46] 2025-06-03 06:23:12,047 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 09:17:46] 2025-06-03 06:23:12,393 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,393 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,393 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,394 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,394 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,394 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,394 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,394 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,394 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 09:17:46] 2025-06-03 06:23:12,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,395 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 09:17:46] 2025-06-03 06:23:12,395 | INFO     | job 6677391498 has completed (purged errors)
[2025-06-03 09:17:46] 2025-06-03 06:23:12,395 | INFO     | overall cleanup function is called
[2025-06-03 09:17:46] 2025-06-03 06:23:13,404 | INFO     | --- collectZombieJob: --- 10, [24363]
[2025-06-03 09:17:46] 2025-06-03 06:23:13,404 | INFO     | zombie collector waiting for pid 24363
[2025-06-03 09:17:46] 2025-06-03 06:23:13,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 09:17:46] 2025-06-03 06:23:13,405 | INFO     | collected zombie processes
[2025-06-03 09:17:46] 2025-06-03 06:23:13,405 | INFO     | will attempt to kill all subprocesses of pid=24363
[2025-06-03 09:17:46] 2025-06-03 06:23:13,518 | INFO     | process IDs to be killed: [24363] (in reverse order)
[2025-06-03 09:17:46] 2025-06-03 06:23:14,301 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 09:17:46] 2025-06-03 06:23:14,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 09:17:46] 2025-06-03 06:23:14,305 | INFO     | did not find any defunct processes belonging to 24363
[2025-06-03 09:17:46] 2025-06-03 06:23:14,308 | INFO     | did not find any defunct processes belonging to 24363
[2025-06-03 09:17:46] 2025-06-03 06:23:14,308 | INFO     | ready for new job
[2025-06-03 09:17:46] 2025-06-03 06:23:14,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 09:17:46] 2025-06-03 06:23:14,310 | INFO     | **************************************
[2025-06-03 09:17:46] 2025-06-03 06:23:14,311 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 09:17:46] 2025-06-03 06:23:14,311 | INFO     | **************************************
[2025-06-03 09:17:46] 2025-06-03 06:23:14,311 | INFO     | 
[2025-06-03 09:17:46] 2025-06-03 06:23:14,311 | INFO     | pilot is running in a VM
[2025-06-03 09:17:46] 2025-06-03 06:23:14,311 | INFO     | architecture information:
[2025-06-03 09:17:46] 2025-06-03 06:23:14,326 | INFO     | executing command: cat /etc/os-release
[2025-06-03 09:17:46] 2025-06-03 06:23:14,652 | INFO     | cat /etc/os-release:
[2025-06-03 09:17:46] NAME="CentOS Linux"
[2025-06-03 09:17:46] VERSION="7 (Core)"
[2025-06-03 09:17:46] ID="centos"
[2025-06-03 09:17:46] ID_LIKE="rhel fedora"
[2025-06-03 09:17:46] VERSION_ID="7"
[2025-06-03 09:17:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 09:17:46] ANSI_COLOR="0;31"
[2025-06-03 09:17:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 09:17:46] HOME_URL="https://www.centos.org/"
[2025-06-03 09:17:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 09:17:46] 
[2025-06-03 09:17:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 09:17:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 09:17:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 09:17:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 09:17:46] 
[2025-06-03 09:17:46] 2025-06-03 06:23:14,653 | INFO     | **************************************
[2025-06-03 09:17:46] 2025-06-03 06:23:15,156 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 09:17:46] 2025-06-03 06:23:15,331 | INFO     | sufficient remaining disk space (496677945344 B)
[2025-06-03 09:17:46] 2025-06-03 06:23:15,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 09:17:46] 2025-06-03 06:23:15,332 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 09:17:46] 2025-06-03 06:23:15,332 | INFO     | update_server=False
[2025-06-03 09:17:46] 2025-06-03 06:23:15,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 09:17:46] 2025-06-03 06:23:15,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 09:17:46] 2025-06-03 06:23:15,524 | INFO     | all job control threads have been joined
[2025-06-03 09:17:46] 2025-06-03 06:23:15,902 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 09:17:46] 2025-06-03 06:23:15,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 09:17:46] 2025-06-03 06:23:15,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 09:17:46] 2025-06-03 06:23:16,105 | INFO     | all payload control threads have been joined
[2025-06-03 09:17:46] 2025-06-03 06:23:16,183 | INFO     | all data control threads have been joined
[2025-06-03 09:17:46] 2025-06-03 06:23:16,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:17:46] 2025-06-03 06:23:16,217 | INFO     | aborting loop
[2025-06-03 09:17:46] 2025-06-03 06:23:16,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 09:17:46] 2025-06-03 06:23:16,338 | INFO     | [job] retrieve thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:16,344 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:16,530 | INFO     | [job] control thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:16,867 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:17,056 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:17,057 | INFO     | [data] copytool_in thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:17,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:17:46] 2025-06-03 06:23:17,111 | INFO     | [payload] control thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:17,135 | INFO     | [job] validate thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:17,189 | INFO     | [data] control thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:17,223 | INFO     | [job] job monitor thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:17,376 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:17,568 | INFO     | [payload] validate_post thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:17,936 | INFO     | [payload] failed_post thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:18,063 | INFO     | [job] queue monitor thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:18,341 | INFO     | [data] copytool_out thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:19,342 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 09:17:46] 2025-06-03 06:23:20,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140417377527616)>', '<ExcThread(monitor, started 140417060280064)>']
[2025-06-03 09:17:46] 2025-06-03 06:23:20,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 09:17:46] 2025-06-03 06:23:20,932 | INFO     | [monitor] control thread has ended
[2025-06-03 09:17:46] 2025-06-03 06:23:25,749 | INFO     | all workflow threads have been joined
[2025-06-03 09:17:46] 2025-06-03 06:23:25,749 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 09:17:46] 2025-06-03 06:23:25,750 | INFO     | traces error code: 0
[2025-06-03 09:17:46] 2025-06-03 06:23:25,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 09:17:46] 2025-06-03 06:23:26,207 [wrapper] ==== pilot stdout END ====
[2025-06-03 09:17:46] 2025-06-03 06:23:26,294 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 09:17:46] 2025-06-03 06:23:26,329 [wrapper] pilotpid: 15783
[2025-06-03 09:17:46] 2025-06-03 06:23:26,374 [wrapper] Pilot exit status: 0
[2025-06-03 09:17:46] 2025-06-03 06:23:26,724 [wrapper] pandaids: 6677391498
[2025-06-03 09:17:46] 2025-06-03 06:23:27,426 [wrapper] cleanup supervisor_pilot 14438 15784
[2025-06-03 09:17:46] 2025-06-03 06:23:27,484 [wrapper] Test setup, not cleaning
[2025-06-03 09:17:46] 2025-06-03 06:23:27,516 [wrapper] apfmon messages muted
[2025-06-03 09:17:46] 2025-06-03 06:23:27,544 [wrapper] ==== wrapper stdout END ====
[2025-06-03 09:17:46] 2025-06-03 06:23:27,585 [wrapper] ==== wrapper stderr END ====
[2025-06-03 09:17:46]  *** Error codes and diagnostics ***
[2025-06-03 09:17:46]     "exeErrorCode": 0,
[2025-06-03 09:17:46]     "exeErrorDiag": "",
[2025-06-03 09:17:46]     "pilotErrorCode": 0,
[2025-06-03 09:17:46]     "pilotErrorDiag": "",
[2025-06-03 09:17:46]  *** Listing of results directory ***
[2025-06-03 09:17:46] total 391340
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-03 09:17:46] -rwx------. 1 boinc boinc     37140 Jun  2 20:21 runpilot2-wrapper.sh
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:21 queuedata.json
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc       100 Jun  3 04:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 09:17:46] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 04:50 run_atlas
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc       105 Jun  3 04:50 job.xml
[2025-06-03 09:17:46] -rw-r--r--. 2 boinc boinc 217229253 Jun  3 04:50 EVNT.45006593._000288.pool.root.1
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc      6392 Jun  3 04:50 init_data.xml
[2025-06-03 09:17:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:50 start_atlas.sh
[2025-06-03 09:17:46] drwxrwx--x. 2 boinc boinc        68 Jun  3 04:50 shared
[2025-06-03 09:17:46] -rw-r--r--. 2 boinc boinc    508877 Jun  3 04:50 input.tar.gz
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc         0 Jun  3 04:50 boinc_lockfile
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc      2521 Jun  3 04:50 pandaJob.out
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc    988073 Jun  3 04:50 agis_schedconf.cvmfs.json
[2025-06-03 09:17:46] drwx------. 4 boinc boinc      4096 Jun  3 04:50 pilot3
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc 176743683 Jun  3 08:20 HITS.45006595._007182.pool.root.1
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc       531 Jun  3 08:20 boinc_task_state.xml
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc      1016 Jun  3 08:21 memory_monitor_summary.json
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc   1603667 Jun  3 08:21 agis_ddmendpoints.agis.ALL.json
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc    363555 Jun  3 08:21 log.45006595._007182.job.log.tgz.1
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc        95 Jun  3 08:22 pilot_heartbeat.json
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc      7691 Jun  3 08:23 heartbeat.json
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc      4416 Jun  3 08:23 pilotlog.txt
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc   1102739 Jun  3 08:23 log.45006595._007182.job.log.1
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc       357 Jun  3 08:23 output.list
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc       620 Jun  3 08:23 runtime_log
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc   1484800 Jun  3 08:23 result.tar.gz
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc      8659 Jun  3 08:23 runtime_log.err
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc       656 Jun  3 08:23 B6sKDmmxOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmy9VKDm4GVAUm.diag
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc      8192 Jun  3 09:17 boinc_mmap_file
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc        28 Jun  3 09:17 wrapper_checkpoint.txt
[2025-06-03 09:17:46] -rw-r--r--. 1 boinc boinc     20484 Jun  3 09:17 stderr.txt
[2025-06-03 09:17:46] HITS file was successfully produced:
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc 176743683 Jun  3 08:20 shared/HITS.pool.root.1
[2025-06-03 09:17:46]  *** Contents of shared directory: ***
[2025-06-03 09:17:46] total 386712
[2025-06-03 09:17:46] -rw-r--r--. 2 boinc boinc 217229253 Jun  3 04:50 ATLAS.root_0
[2025-06-03 09:17:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:50 start_atlas.sh
[2025-06-03 09:17:46] -rw-r--r--. 2 boinc boinc    508877 Jun  3 04:50 input.tar.gz
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc 176743683 Jun  3 08:20 HITS.pool.root.1
[2025-06-03 09:17:46] -rw-------. 1 boinc boinc   1484800 Jun  3 08:23 result.tar.gz
09:17:47 (12107): run_atlas exited; CPU time 48115.492757
09:17:47 (12107): called boinc_finish(0)

</stderr_txt>
]]>

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