Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:17:59 (30455): wrapper (7.7.26015): starting
08:17:59 (30455): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:17:59] Arguments: --nthreads 8
[2025-06-03 08:17:59] Threads: 8
[2025-06-03 08:17:59] Checking for CVMFS
[2025-06-03 08:18:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:18:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:18:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:18:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:18:03] 2.11.2.0 16537 31397 89576 146729 2 155 21918749 25165825 4353 130560 0 15594693 99.784 18120112 2092 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:18:03] CVMFS is ok
[2025-06-03 08:18:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:18:03] Checking for apptainer binary...
[2025-06-03 08:18:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:18:03] Running /usr/bin/apptainer --version
[2025-06-03 08:18:03] apptainer version 1.3.2-1.el7
[2025-06-03 08:18:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:18:05] cg-vwn365.simple-grid.lan
[2025-06-03 08:18:05] apptainer works
[2025-06-03 08:18:05] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:18:05] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:18:05] Starting ATLAS job with PandaID=6677390257
[2025-06-03 08:18:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:57:16]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:57:16] 2025-06-03 09:56:57,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:57:16] 2025-06-03 09:56:57,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:57:16] 2025-06-03 09:56:57,239 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:57:16] 2025-06-03 09:56:57,245 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 11:57:16] 2025-06-03 09:56:57,246 | INFO     | sum of deviations: 16955179512.50001
[2025-06-03 11:57:16] 2025-06-03 09:56:57,247 | INFO     | mean x: 1748938097.5
[2025-06-03 11:57:16] 2025-06-03 09:56:57,247 | INFO     | mean y: 2463763.070093458
[2025-06-03 11:57:16] 2025-06-03 09:56:57,247 | INFO     | -- intersect: -9755665566.121986
[2025-06-03 11:57:16] 2025-06-03 09:56:57,247 | INFO     | intersect: -9755665566.121986
[2025-06-03 11:57:16] 2025-06-03 09:56:57,247 | INFO     | chi2: 2.632305193976833
[2025-06-03 11:57:16] 2025-06-03 09:56:57,248 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,249 | INFO     | sum of deviations: 30662824372.00005
[2025-06-03 11:57:16] 2025-06-03 09:56:57,249 | INFO     | mean x: 1748937945.0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,250 | INFO     | mean y: 2473614.799043062
[2025-06-03 11:57:16] 2025-06-03 09:56:57,250 | INFO     | -- intersect: -18941854891.198166
[2025-06-03 11:57:16] 2025-06-03 09:56:57,250 | INFO     | intersect: -18941854891.198166
[2025-06-03 11:57:16] 2025-06-03 09:56:57,250 | INFO     | chi2: 1.8650261635799625
[2025-06-03 11:57:16] 2025-06-03 09:56:57,250 | INFO     | current chi2=1.8650261635799625 (change=29.148558919100143 %)
[2025-06-03 11:57:16] 2025-06-03 09:56:57,251 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,252 | INFO     | sum of deviations: 30085271309.0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,252 | INFO     | mean x: 1748937792.5
[2025-06-03 11:57:16] 2025-06-03 09:56:57,252 | INFO     | mean y: 2473170.6764705884
[2025-06-03 11:57:16] 2025-06-03 09:56:57,252 | INFO     | -- intersect: -19985548167.16404
[2025-06-03 11:57:16] 2025-06-03 09:56:57,253 | INFO     | intersect: -19985548167.16404
[2025-06-03 11:57:16] 2025-06-03 09:56:57,253 | INFO     | chi2: 1.866255999946813
[2025-06-03 11:57:16] 2025-06-03 09:56:57,253 | INFO     | current chi2=1.866255999946813 (change=-0.06594204364884979 %)
[2025-06-03 11:57:16] 2025-06-03 09:56:57,253 | INFO     | right removable region: 203
[2025-06-03 11:57:16] 2025-06-03 09:56:57,254 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,255 | INFO     | sum of deviations: -22937840248.0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,255 | INFO     | mean x: 1748938250.0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,256 | INFO     | mean y: 2492760.2775119618
[2025-06-03 11:57:16] 2025-06-03 09:56:57,256 | INFO     | -- intersect: 14174118028.217638
[2025-06-03 11:57:16] 2025-06-03 09:56:57,256 | INFO     | intersect: 14174118028.217638
[2025-06-03 11:57:16] 2025-06-03 09:56:57,256 | INFO     | chi2: 0.8426191859778724
[2025-06-03 11:57:16] 2025-06-03 09:56:57,256 | INFO     | current chi2=0.8426191859778724 (change=67.98930504312608 %)
[2025-06-03 11:57:16] 2025-06-03 09:56:57,257 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,258 | INFO     | sum of deviations: -27103321933.0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,259 | INFO     | mean x: 1748938402.5
[2025-06-03 11:57:16] 2025-06-03 09:56:57,259 | INFO     | mean y: 2495921.431372549
[2025-06-03 11:57:16] 2025-06-03 09:56:57,259 | INFO     | -- intersect: 18009379107.207935
[2025-06-03 11:57:16] 2025-06-03 09:56:57,259 | INFO     | intersect: 18009379107.207935
[2025-06-03 11:57:16] 2025-06-03 09:56:57,259 | INFO     | chi2: 0.8049074663820549
[2025-06-03 11:57:16] 2025-06-03 09:56:57,259 | INFO     | current chi2=0.8049074663820549 (change=4.47553535729815 %)
[2025-06-03 11:57:16] 2025-06-03 09:56:57,259 | INFO     | left removable region: 20
[2025-06-03 11:57:16] 2025-06-03 09:56:57,260 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,261 | INFO     | sum of deviations: -11699088861.999964
[2025-06-03 11:57:16] 2025-06-03 09:56:57,261 | INFO     | mean x: 1748938372.0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,261 | INFO     | mean y: 2506827.6721311477
[2025-06-03 11:57:16] 2025-06-03 09:56:57,261 | INFO     | -- intersect: 10769831813.328306
[2025-06-03 11:57:16] 2025-06-03 09:56:57,262 | INFO     | intersect: 10769831813.328306
[2025-06-03 11:57:16] 2025-06-03 09:56:57,262 | INFO     | chi2: 0.012370834430235475
[2025-06-03 11:57:16] 2025-06-03 09:56:57,262 | INFO     | -- intersect: 10769831813.328306
[2025-06-03 11:57:16] 2025-06-03 09:56:57,262 | INFO     | current memory leak: -6.16 B/s (using 183 data points, chi2=0.01)
[2025-06-03 11:57:16] 2025-06-03 09:56:57,263 | INFO     | ..............................
[2025-06-03 11:57:16] 2025-06-03 09:56:57,263 | INFO     | . Timing measurements:
[2025-06-03 11:57:16] 2025-06-03 09:56:57,263 | INFO     | . get job = 0 s
[2025-06-03 11:57:16] 2025-06-03 09:56:57,263 | INFO     | . initial setup = 3 s
[2025-06-03 11:57:16] 2025-06-03 09:56:57,263 | INFO     | . payload setup = 16 s
[2025-06-03 11:57:16] 2025-06-03 09:56:57,264 | INFO     | . stage-in = 0 s
[2025-06-03 11:57:16] 2025-06-03 09:56:57,264 | INFO     | . payload execution = 13025 s
[2025-06-03 11:57:16] 2025-06-03 09:56:57,264 | INFO     | . stage-out = 2 s
[2025-06-03 11:57:16] 2025-06-03 09:56:57,264 | INFO     | . log creation = 0 s
[2025-06-03 11:57:16] 2025-06-03 09:56:57,264 | INFO     | ..............................
[2025-06-03 11:57:16] 2025-06-03 09:56:57,395 | INFO     | 
[2025-06-03 11:57:16] 2025-06-03 09:56:57,395 | INFO     | job summary report
[2025-06-03 11:57:16] 2025-06-03 09:56:57,395 | INFO     | --------------------------------------------------
[2025-06-03 11:57:16] 2025-06-03 09:56:57,395 | INFO     | PanDA job id: 6677390257
[2025-06-03 11:57:16] 2025-06-03 09:56:57,396 | INFO     | task id: 45006595
[2025-06-03 11:57:16] 2025-06-03 09:56:57,396 | INFO     | errors: (none)
[2025-06-03 11:57:16] 2025-06-03 09:56:57,396 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:57:16] 2025-06-03 09:56:57,396 | INFO     | pilot state: finished 
[2025-06-03 11:57:16] 2025-06-03 09:56:57,396 | INFO     | transexitcode: 0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,396 | INFO     | exeerrorcode: 0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,396 | INFO     | exeerrordiag: 
[2025-06-03 11:57:16] 2025-06-03 09:56:57,397 | INFO     | exitcode: 0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,397 | INFO     | exitmsg: OK
[2025-06-03 11:57:16] 2025-06-03 09:56:57,397 | INFO     | cpuconsumptiontime: 49197 s
[2025-06-03 11:57:16] 2025-06-03 09:56:57,397 | INFO     | nevents: 400
[2025-06-03 11:57:16] 2025-06-03 09:56:57,397 | INFO     | neventsw: 0
[2025-06-03 11:57:16] 2025-06-03 09:56:57,397 | INFO     | pid: 10641
[2025-06-03 11:57:16] 2025-06-03 09:56:57,397 | INFO     | pgrp: 10641
[2025-06-03 11:57:16] 2025-06-03 09:56:57,397 | INFO     | corecount: 8
[2025-06-03 11:57:16] 2025-06-03 09:56:57,397 | INFO     | event service: False
[2025-06-03 11:57:16] 2025-06-03 09:56:57,398 | INFO     | sizes: {0: 2404298, 1: 2405155, 2: 2405155, 12: 2405183, 15: 2405417, 23: 2405445, 13046: 2435022, 13048: 2443965, 13051: 2444021, 13061: 2444191}
[2025-06-03 11:57:16] 2025-06-03 09:56:57,398 | INFO     | --------------------------------------------------
[2025-06-03 11:57:16] 2025-06-03 09:56:57,398 | INFO     | 
[2025-06-03 11:57:16] 2025-06-03 09:56:57,398 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-03 11:57:16] 2025-06-03 09:56:57,468 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,468 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,468 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,468 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,469 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,470 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:57:16] 2025-06-03 09:56:57,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,470 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:57:16] 2025-06-03 09:56:57,470 | INFO     | job 6677390257 has completed (purged errors)
[2025-06-03 11:57:16] 2025-06-03 09:56:57,471 | INFO     | overall cleanup function is called
[2025-06-03 11:57:16] 2025-06-03 09:56:58,480 | INFO     | --- collectZombieJob: --- 10, [10641]
[2025-06-03 11:57:16] 2025-06-03 09:56:58,480 | INFO     | zombie collector waiting for pid 10641
[2025-06-03 11:57:16] 2025-06-03 09:56:58,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:57:16] 2025-06-03 09:56:58,481 | INFO     | collected zombie processes
[2025-06-03 11:57:16] 2025-06-03 09:56:58,481 | INFO     | will attempt to kill all subprocesses of pid=10641
[2025-06-03 11:57:16] 2025-06-03 09:56:58,578 | INFO     | process IDs to be killed: [10641] (in reverse order)
[2025-06-03 11:57:16] 2025-06-03 09:56:58,683 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:57:16] 2025-06-03 09:56:58,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:57:16] 2025-06-03 09:56:58,687 | INFO     | did not find any defunct processes belonging to 10641
[2025-06-03 11:57:16] 2025-06-03 09:56:58,690 | INFO     | did not find any defunct processes belonging to 10641
[2025-06-03 11:57:16] 2025-06-03 09:56:58,691 | INFO     | ready for new job
[2025-06-03 11:57:16] 2025-06-03 09:56:58,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:57:16] 2025-06-03 09:56:58,693 | INFO     | **************************************
[2025-06-03 11:57:16] 2025-06-03 09:56:58,693 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:57:16] 2025-06-03 09:56:58,693 | INFO     | **************************************
[2025-06-03 11:57:16] 2025-06-03 09:56:58,693 | INFO     | 
[2025-06-03 11:57:16] 2025-06-03 09:56:58,694 | INFO     | pilot is running in a VM
[2025-06-03 11:57:16] 2025-06-03 09:56:58,694 | INFO     | architecture information:
[2025-06-03 11:57:16] 2025-06-03 09:56:58,694 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:57:16] 2025-06-03 09:56:58,712 | INFO     | cat /etc/os-release:
[2025-06-03 11:57:16] NAME="CentOS Linux"
[2025-06-03 11:57:16] VERSION="7 (Core)"
[2025-06-03 11:57:16] ID="centos"
[2025-06-03 11:57:16] ID_LIKE="rhel fedora"
[2025-06-03 11:57:16] VERSION_ID="7"
[2025-06-03 11:57:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:57:16] ANSI_COLOR="0;31"
[2025-06-03 11:57:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:57:16] HOME_URL="https://www.centos.org/"
[2025-06-03 11:57:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:57:16] 
[2025-06-03 11:57:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:57:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:57:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:57:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:57:16] 
[2025-06-03 11:57:16] 2025-06-03 09:56:58,712 | INFO     | **************************************
[2025-06-03 11:57:16] 2025-06-03 09:56:59,216 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-03 11:57:16] 2025-06-03 09:56:59,284 | INFO     | sufficient remaining disk space (496859348992 B)
[2025-06-03 11:57:16] 2025-06-03 09:56:59,284 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:57:16] 2025-06-03 09:56:59,284 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:57:16] 2025-06-03 09:56:59,284 | INFO     | update_server=False
[2025-06-03 11:57:16] 2025-06-03 09:56:59,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:57:16] 2025-06-03 09:56:59,285 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 11:57:16] 2025-06-03 09:56:59,285 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:57:16] 2025-06-03 09:56:59,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:57:16] 2025-06-03 09:56:59,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:57:16] 2025-06-03 09:56:59,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:57:16] 2025-06-03 09:56:59,301 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 11:57:16] 2025-06-03 09:56:59,302 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 11:57:16] 2025-06-03 09:56:59,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:57:16] 2025-06-03 09:56:59,302 | INFO     | will abort loop
[2025-06-03 11:57:16] 2025-06-03 09:56:59,847 | INFO     | all data control threads have been joined
[2025-06-03 11:57:16] 2025-06-03 09:56:59,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:57:16] 2025-06-03 09:57:00,290 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:00,295 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:00,308 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:00,457 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:00,752 | INFO     | all payload control threads have been joined
[2025-06-03 11:57:16] 2025-06-03 09:57:00,784 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:00,790 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:00,814 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:00,853 | INFO     | [data] control thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:00,915 | INFO     | all job control threads have been joined
[2025-06-03 11:57:16] 2025-06-03 09:57:00,921 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:01,232 | INFO     | [job] validate thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:01,720 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:01,758 | INFO     | [payload] control thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:01,920 | INFO     | [job] control thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:01,938 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:02,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:57:16] 2025-06-03 09:57:06,257 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:09,616 | INFO     | job.realtimelogging is not enabled
[2025-06-03 11:57:16] 2025-06-03 09:57:10,621 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:57:16] 2025-06-03 09:57:10,793 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048234006336)>', '<ExcThread(monitor, started 140047198185216)>']
[2025-06-03 11:57:16] 2025-06-03 09:57:11,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:57:16] 2025-06-03 09:57:11,338 | INFO     | [monitor] control thread has ended
[2025-06-03 11:57:16] 2025-06-03 09:57:15,818 | INFO     | all workflow threads have been joined
[2025-06-03 11:57:16] 2025-06-03 09:57:15,819 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:57:16] 2025-06-03 09:57:15,819 | INFO     | traces error code: 0
[2025-06-03 11:57:16] 2025-06-03 09:57:15,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:57:16] 2025-06-03 09:57:16,025 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:57:16] 2025-06-03 09:57:16,030 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:57:16] 2025-06-03 09:57:16,033 [wrapper] pilotpid: 3157
[2025-06-03 11:57:16] 2025-06-03 09:57:16,036 [wrapper] Pilot exit status: 0
[2025-06-03 11:57:16] 2025-06-03 09:57:16,059 [wrapper] pandaids: 6677390257
[2025-06-03 11:57:16] 2025-06-03 09:57:16,100 [wrapper] cleanup supervisor_pilot 19602 3158
[2025-06-03 11:57:16] 2025-06-03 09:57:16,111 [wrapper] Test setup, not cleaning
[2025-06-03 11:57:16] 2025-06-03 09:57:16,126 [wrapper] apfmon messages muted
[2025-06-03 11:57:16] 2025-06-03 09:57:16,138 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:57:16] 2025-06-03 09:57:16,141 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:57:16]  *** Error codes and diagnostics ***
[2025-06-03 11:57:16]     "exeErrorCode": 0,
[2025-06-03 11:57:16]     "exeErrorDiag": "",
[2025-06-03 11:57:16]     "pilotErrorCode": 0,
[2025-06-03 11:57:16]     "pilotErrorDiag": "",
[2025-06-03 11:57:16]  *** Listing of results directory ***
[2025-06-03 11:57:16] total 384996
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:47 pilot3.tar.gz
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:57 queuedata.json
[2025-06-03 11:57:16] -rwx------. 1 boinc boinc     37140 Jun  2 19:58 runpilot2-wrapper.sh
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:57:16] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:17 run_atlas
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:17 job.xml
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc      6392 Jun  3 08:17 init_data.xml
[2025-06-03 11:57:16] -rw-r--r--. 2 boinc boinc 212680736 Jun  3 08:17 EVNT.45006593._000263.pool.root.1
[2025-06-03 11:57:16] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:17 start_atlas.sh
[2025-06-03 11:57:16] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:17 shared
[2025-06-03 11:57:16] -rw-r--r--. 2 boinc boinc    508877 Jun  3 08:17 input.tar.gz
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:17 boinc_lockfile
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc      2520 Jun  3 08:18 pandaJob.out
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc    988073 Jun  3 08:18 agis_schedconf.cvmfs.json
[2025-06-03 11:57:16] drwx------. 4 boinc boinc      4096 Jun  3 08:18 pilot3
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc 174711198 Jun  3 11:56 HITS.45006595._006564.pool.root.1
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc       531 Jun  3 11:56 boinc_task_state.xml
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc      1018 Jun  3 11:56 memory_monitor_summary.json
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc   1603667 Jun  3 11:56 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc    376177 Jun  3 11:56 log.45006595._006564.job.log.tgz.1
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc        95 Jun  3 11:56 pilot_heartbeat.json
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc      7699 Jun  3 11:56 heartbeat.json
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc      8192 Jun  3 11:57 boinc_mmap_file
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc        28 Jun  3 11:57 wrapper_checkpoint.txt
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc      4798 Jun  3 11:57 pilotlog.txt
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc   1134387 Jun  3 11:57 log.45006595._006564.job.log.1
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc       357 Jun  3 11:57 output.list
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc       620 Jun  3 11:57 runtime_log
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc   1525760 Jun  3 11:57 result.tar.gz
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc      8673 Jun  3 11:57 runtime_log.err
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc       656 Jun  3 11:57 3Y2NDm4bOg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7rfKDmQoNJAo.diag
[2025-06-03 11:57:16] -rw-r--r--. 1 boinc boinc     20517 Jun  3 11:57 stderr.txt
[2025-06-03 11:57:16] HITS file was successfully produced:
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc 174711198 Jun  3 11:56 shared/HITS.pool.root.1
[2025-06-03 11:57:16]  *** Contents of shared directory: ***
[2025-06-03 11:57:16] total 380328
[2025-06-03 11:57:16] -rw-r--r--. 2 boinc boinc 212680736 Jun  3 08:17 ATLAS.root_0
[2025-06-03 11:57:16] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:17 start_atlas.sh
[2025-06-03 11:57:16] -rw-r--r--. 2 boinc boinc    508877 Jun  3 08:17 input.tar.gz
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc 174711198 Jun  3 11:56 HITS.pool.root.1
[2025-06-03 11:57:16] -rw-------. 1 boinc boinc   1525760 Jun  3 11:57 result.tar.gz
11:57:17 (30455): run_atlas exited; CPU time 49361.882075
11:57:17 (30455): called boinc_finish(0)

</stderr_txt>
]]>

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