Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:29:50 (907873): wrapper (7.7.26015): starting
11:29:50 (907873): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 11:29:50] Arguments: --nthreads 4
[2025-06-04 11:29:50] Threads: 4
[2025-06-04 11:29:50] Checking for CVMFS
[2025-06-04 11:29:50] No cvmfs_config command found, will try listing directly
[2025-06-04 11:29:50] CVMFS is ok
[2025-06-04 11:29:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:29:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:29:50] Further information can be found at the LHC@home message board.
[2025-06-04 11:29:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:29:50] Checking for apptainer binary...
[2025-06-04 11:29:50] which: no apptainer in ((null))
[2025-06-04 11:29:50] apptainer is not installed, using version from CVMFS
[2025-06-04 11:29:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:29:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-06-04 11:29:50] apptainer works
[2025-06-04 11:29:50] Set ATHENA_PROC_NUMBER=4
[2025-06-04 11:29:50] Set ATHENA_CORE_NUMBER=4
[2025-06-04 11:29:50] Starting ATLAS job with PandaID=6677391593
[2025-06-04 11:29:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:33:20]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:33:20] 2025-06-04 11:31:39,936 | INFO     | PID=912578 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 13:33:20] 2025-06-04 11:31:39,936 | INFO     | .. there are 13 such processes running
[2025-06-04 13:33:20] 2025-06-04 11:31:41,809 | WARNING  | process 929297 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:33:20] 2025-06-04 11:31:41,809 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6677391593/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:33:20] 2025-06-04 11:31:42,379 | INFO     | number of running child processes to parent process 929297: 1
[2025-06-04 13:33:20] 2025-06-04 11:31:42,379 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:33:20] 2025-06-04 11:31:44,430 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:33:20] 2025-06-04 11:31:44,430 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6677391593/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:33:20] 2025-06-04 11:31:44,430 | INFO     | extracted standard info from prmon json
[2025-06-04 13:33:20] 2025-06-04 11:31:44,431 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:33:20] 2025-06-04 11:31:44,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:33:20] 2025-06-04 11:31:44,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:33:20] 2025-06-04 11:31:44,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:33:20] 2025-06-04 11:31:44,433 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:33:20] 2025-06-04 11:31:44,433 | INFO     | sum of square deviations: 522502820.0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,434 | INFO     | sum of deviations: 13150746793.0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,434 | INFO     | mean x: 1749033035.0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,434 | INFO     | mean y: 2298188.7647058824
[2025-06-04 13:33:20] 2025-06-04 11:31:44,434 | INFO     | -- intersect: -44018690206.8143
[2025-06-04 13:33:20] 2025-06-04 11:31:44,434 | INFO     | intersect: -44018690206.8143
[2025-06-04 13:33:20] 2025-06-04 11:31:44,434 | INFO     | chi2: 1.5445282225100303
[2025-06-04 13:33:20] 2025-06-04 11:31:44,434 | INFO     | sum of square deviations: 459366752.5
[2025-06-04 13:33:20] 2025-06-04 11:31:44,435 | INFO     | sum of deviations: 12669293282.500002
[2025-06-04 13:33:20] 2025-06-04 11:31:44,435 | INFO     | mean x: 1749032882.5
[2025-06-04 13:33:20] 2025-06-04 11:31:44,435 | INFO     | mean y: 2297025.2719298247
[2025-06-04 13:33:20] 2025-06-04 11:31:44,435 | INFO     | -- intersect: -48235870905.98006
[2025-06-04 13:33:20] 2025-06-04 11:31:44,435 | INFO     | intersect: -48235870905.98006
[2025-06-04 13:33:20] 2025-06-04 11:31:44,436 | INFO     | chi2: 1.5472104443042227
[2025-06-04 13:33:20] 2025-06-04 11:31:44,436 | INFO     | current chi2=1.5472104443042227 (change=-0.17365961690447518 %)
[2025-06-04 13:33:20] 2025-06-04 11:31:44,436 | INFO     | right removable region: 113
[2025-06-04 13:33:20] 2025-06-04 11:31:44,436 | INFO     | sum of square deviations: 459366752.5
[2025-06-04 13:33:20] 2025-06-04 11:31:44,436 | INFO     | sum of deviations: -3894247136.999999
[2025-06-04 13:33:20] 2025-06-04 11:31:44,437 | INFO     | mean x: 1749033187.5
[2025-06-04 13:33:20] 2025-06-04 11:31:44,437 | INFO     | mean y: 2338564.964912281
[2025-06-04 13:33:20] 2025-06-04 11:31:44,437 | INFO     | -- intersect: 14829636025.809898
[2025-06-04 13:33:20] 2025-06-04 11:31:44,437 | INFO     | intersect: 14829636025.809898
[2025-06-04 13:33:20] 2025-06-04 11:31:44,437 | INFO     | chi2: 0.00513620434346679
[2025-06-04 13:33:20] 2025-06-04 11:31:44,437 | INFO     | current chi2=0.00513620434346679 (change=99.66745804520684 %)
[2025-06-04 13:33:20] 2025-06-04 11:31:44,437 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,438 | INFO     | sum of deviations: -3579619507.0000005
[2025-06-04 13:33:20] 2025-06-04 11:31:44,438 | INFO     | mean x: 1749033340.0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,438 | INFO     | mean y: 2337723.5779816513
[2025-06-04 13:33:20] 2025-06-04 11:31:44,438 | INFO     | -- intersect: 15594760132.423328
[2025-06-04 13:33:20] 2025-06-04 11:31:44,438 | INFO     | intersect: 15594760132.423328
[2025-06-04 13:33:20] 2025-06-04 11:31:44,438 | INFO     | chi2: 0.004920409266900078
[2025-06-04 13:33:20] 2025-06-04 11:31:44,438 | INFO     | current chi2=0.004920409266900078 (change=4.201450373391029 %)
[2025-06-04 13:33:20] 2025-06-04 11:31:44,438 | INFO     | left removable region: 20
[2025-06-04 13:33:20] 2025-06-04 11:31:44,439 | INFO     | sum of square deviations: 249388862.0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,439 | INFO     | sum of deviations: -2240921376.0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,439 | INFO     | mean x: 1749033462.0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,439 | INFO     | mean y: 2334774.7526881723
[2025-06-04 13:33:20] 2025-06-04 11:31:44,439 | INFO     | -- intersect: 15718539744.383945
[2025-06-04 13:33:20] 2025-06-04 11:31:44,439 | INFO     | intersect: 15718539744.383945
[2025-06-04 13:33:20] 2025-06-04 11:31:44,440 | INFO     | chi2: 0.0044481042594405
[2025-06-04 13:33:20] 2025-06-04 11:31:44,440 | INFO     | -- intersect: 15718539744.383945
[2025-06-04 13:33:20] 2025-06-04 11:31:44,440 | INFO     | current memory leak: -8.99 B/s (using 93 data points, chi2=0.00)
[2025-06-04 13:33:20] 2025-06-04 11:31:44,440 | INFO     | ..............................
[2025-06-04 13:33:20] 2025-06-04 11:31:44,440 | INFO     | . Timing measurements:
[2025-06-04 13:33:20] 2025-06-04 11:31:44,440 | INFO     | . get job = 0 s
[2025-06-04 13:33:20] 2025-06-04 11:31:44,440 | INFO     | . initial setup = 1 s
[2025-06-04 13:33:20] 2025-06-04 11:31:44,440 | INFO     | . payload setup = 9 s
[2025-06-04 13:33:20] 2025-06-04 11:31:44,441 | INFO     | . stage-in = 0 s
[2025-06-04 13:33:20] 2025-06-04 11:31:44,441 | INFO     | . payload execution = 7264 s
[2025-06-04 13:33:20] 2025-06-04 11:31:44,441 | INFO     | . stage-out = 0 s
[2025-06-04 13:33:20] 2025-06-04 11:31:44,441 | INFO     | . log creation = 0 s
[2025-06-04 13:33:20] 2025-06-04 11:31:44,441 | INFO     | ..............................
[2025-06-04 13:33:20] 2025-06-04 11:31:44,531 | INFO     | 
[2025-06-04 13:33:20] 2025-06-04 11:31:44,531 | INFO     | job summary report
[2025-06-04 13:33:20] 2025-06-04 11:31:44,532 | INFO     | --------------------------------------------------
[2025-06-04 13:33:20] 2025-06-04 11:31:44,532 | INFO     | PanDA job id: 6677391593
[2025-06-04 13:33:20] 2025-06-04 11:31:44,532 | INFO     | task id: 45006595
[2025-06-04 13:33:20] 2025-06-04 11:31:44,532 | INFO     | errors: (none)
[2025-06-04 13:33:20] 2025-06-04 11:31:44,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:33:20] 2025-06-04 11:31:44,532 | INFO     | pilot state: finished 
[2025-06-04 13:33:20] 2025-06-04 11:31:44,532 | INFO     | transexitcode: 0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,532 | INFO     | exeerrorcode: 0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,532 | INFO     | exeerrordiag: 
[2025-06-04 13:33:20] 2025-06-04 11:31:44,532 | INFO     | exitcode: 0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,532 | INFO     | exitmsg: OK
[2025-06-04 13:33:20] 2025-06-04 11:31:44,532 | INFO     | cpuconsumptiontime: 27950 s
[2025-06-04 13:33:20] 2025-06-04 11:31:44,533 | INFO     | nevents: 400
[2025-06-04 13:33:20] 2025-06-04 11:31:44,533 | INFO     | neventsw: 0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,533 | INFO     | pid: 929297
[2025-06-04 13:33:20] 2025-06-04 11:31:44,533 | INFO     | pgrp: 929297
[2025-06-04 13:33:20] 2025-06-04 11:31:44,533 | INFO     | corecount: 4
[2025-06-04 13:33:20] 2025-06-04 11:31:44,533 | INFO     | event service: False
[2025-06-04 13:33:20] 2025-06-04 11:31:44,533 | INFO     | sizes: {0: 2405017, 1: 2405216, 6: 2405422, 11: 2405450, 7278: 2432880, 7279: 2442027, 7286: 2442141}
[2025-06-04 13:33:20] 2025-06-04 11:31:44,533 | INFO     | --------------------------------------------------
[2025-06-04 13:33:20] 2025-06-04 11:31:44,533 | INFO     | 
[2025-06-04 13:33:20] 2025-06-04 11:31:44,533 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2025-06-04 13:33:20] 2025-06-04 11:31:44,563 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,564 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,564 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,564 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,564 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,564 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,564 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,564 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,564 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,565 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,565 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,565 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,565 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,565 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:33:20] 2025-06-04 11:31:44,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,565 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:33:20] 2025-06-04 11:31:44,566 | INFO     | job 6677391593 has completed (purged errors)
[2025-06-04 13:33:20] 2025-06-04 11:31:44,566 | INFO     | overall cleanup function is called
[2025-06-04 13:33:20] 2025-06-04 11:31:45,575 | INFO     | --- collectZombieJob: --- 10, [929297]
[2025-06-04 13:33:20] 2025-06-04 11:31:45,575 | INFO     | zombie collector waiting for pid 929297
[2025-06-04 13:33:20] 2025-06-04 11:31:45,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:33:20] 2025-06-04 11:31:45,575 | INFO     | collected zombie processes
[2025-06-04 13:33:20] 2025-06-04 11:31:45,575 | INFO     | will attempt to kill all subprocesses of pid=929297
[2025-06-04 13:33:20] 2025-06-04 11:31:46,146 | INFO     | process IDs to be killed: [929297] (in reverse order)
[2025-06-04 13:33:20] 2025-06-04 11:31:46,375 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:33:20] 2025-06-04 11:31:46,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:33:20] 2025-06-04 11:31:46,398 | INFO     | did not find any defunct processes belonging to 929297
[2025-06-04 13:33:20] 2025-06-04 11:31:46,418 | INFO     | did not find any defunct processes belonging to 929297
[2025-06-04 13:33:20] 2025-06-04 11:31:46,418 | INFO     | ready for new job
[2025-06-04 13:33:20] 2025-06-04 11:31:46,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:33:20] 2025-06-04 11:31:46,420 | INFO     | **************************************
[2025-06-04 13:33:20] 2025-06-04 11:31:46,420 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:33:20] 2025-06-04 11:31:46,420 | INFO     | **************************************
[2025-06-04 13:33:20] 2025-06-04 11:31:46,420 | INFO     | 
[2025-06-04 13:33:20] 2025-06-04 11:31:46,427 | INFO     | architecture information:
[2025-06-04 13:33:20] 2025-06-04 11:31:46,427 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:33:20] 2025-06-04 11:31:46,448 | INFO     | cat /etc/os-release:
[2025-06-04 13:33:20] NAME="CentOS Linux"
[2025-06-04 13:33:20] VERSION="7 (Core)"
[2025-06-04 13:33:20] ID="centos"
[2025-06-04 13:33:20] ID_LIKE="rhel fedora"
[2025-06-04 13:33:20] VERSION_ID="7"
[2025-06-04 13:33:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:33:20] ANSI_COLOR="0;31"
[2025-06-04 13:33:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:33:20] HOME_URL="https://www.centos.org/"
[2025-06-04 13:33:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:33:20] 
[2025-06-04 13:33:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:33:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:33:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:33:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:33:20] 
[2025-06-04 13:33:20] 2025-06-04 11:31:46,448 | INFO     | **************************************
[2025-06-04 13:33:20] 2025-06-04 11:31:46,952 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-06-04 13:33:20] 2025-06-04 11:31:46,968 | INFO     | sufficient remaining disk space (3245955088384 B)
[2025-06-04 13:33:20] 2025-06-04 11:31:46,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:33:20] 2025-06-04 11:31:46,969 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:33:20] 2025-06-04 11:31:46,969 | INFO     | update_server=False
[2025-06-04 13:33:20] 2025-06-04 11:31:46,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:33:20] 2025-06-04 11:31:47,028 | INFO     | all data control threads have been joined
[2025-06-04 13:33:20] 2025-06-04 11:31:47,388 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 13:33:20] 2025-06-04 11:31:47,389 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 13:33:20] 2025-06-04 11:31:47,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:33:20] 2025-06-04 11:31:47,389 | INFO     | will abort loop
[2025-06-04 13:33:20] 2025-06-04 11:31:47,913 | INFO     | all payload control threads have been joined
[2025-06-04 13:33:20] 2025-06-04 11:31:47,925 | INFO     | all job control threads have been joined
[2025-06-04 13:33:20] 2025-06-04 11:31:47,962 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:33:20] 2025-06-04 11:31:47,962 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:33:20] 2025-06-04 11:31:47,962 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:33:20] 2025-06-04 11:31:47,973 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:48,007 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:48,033 | INFO     | [data] control thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:48,191 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:33:20] 2025-06-04 11:31:48,307 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:48,393 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:48,610 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:33:20] 2025-06-04 11:31:48,661 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:48,841 | INFO     | [job] validate thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:48,857 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:48,918 | INFO     | [payload] control thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:48,930 | INFO     | [job] control thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:49,020 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:49,119 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:49,174 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:49,542 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:33:20] 2025-06-04 11:31:50,196 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:50,548 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:52,615 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:33:20] 2025-06-04 11:31:54,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23452537603904)>', '<ExcThread(monitor, started 23452299790080)>']
[2025-06-04 13:33:20] 2025-06-04 11:31:54,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:33:20] 2025-06-04 11:31:54,998 | INFO     | [monitor] control thread has ended
[2025-06-04 13:33:20] 2025-06-04 11:31:59,600 | INFO     | all workflow threads have been joined
[2025-06-04 13:33:20] 2025-06-04 11:31:59,600 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:33:20] 2025-06-04 11:31:59,601 | INFO     | traces error code: 0
[2025-06-04 13:33:20] 2025-06-04 11:31:59,601 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:33:20] 2025-06-04 11:31:59,732 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:33:20] 2025-06-04 11:31:59,736 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:33:20] 2025-06-04 11:31:59,739 [wrapper] pilotpid: 912578
[2025-06-04 13:33:20] 2025-06-04 11:31:59,743 [wrapper] Pilot exit status: 0
[2025-06-04 13:33:20] 2025-06-04 11:31:59,755 [wrapper] pandaids: 6677391593
[2025-06-04 13:33:20] 2025-06-04 11:31:59,896 [wrapper] cleanup supervisor_pilot 1291241 912579
[2025-06-04 13:33:20] 2025-06-04 11:31:59,899 [wrapper] Test setup, not cleaning
[2025-06-04 13:33:20] 2025-06-04 11:31:59,901 [wrapper] apfmon messages muted
[2025-06-04 13:33:20] 2025-06-04 11:31:59,905 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:33:20] 2025-06-04 11:31:59,908 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:33:20]  *** Error codes and diagnostics ***
[2025-06-04 13:33:20]     "exeErrorCode": 0,
[2025-06-04 13:33:20]     "exeErrorDiag": "",
[2025-06-04 13:33:20]     "pilotErrorCode": 0,
[2025-06-04 13:33:20]     "pilotErrorDiag": "",
[2025-06-04 13:33:20]  *** Listing of results directory ***
[2025-06-04 13:33:20] total 386004
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc      5111 Jun  2 20:21 queuedata.json
[2025-06-04 13:33:20] -rwx------ 1 boinc boinc     37140 Jun  2 20:21 runpilot2-wrapper.sh
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:33:20] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:29 run_atlas
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:29 job.xml
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc      6683 Jun  4 11:29 init_data.xml
[2025-06-04 13:33:20] -rw-r--r-- 2 boinc boinc 214031950 Jun  4 11:29 EVNT.45006593._000291.pool.root.1
[2025-06-04 13:33:20] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:29 start_atlas.sh
[2025-06-04 13:33:20] drwxrwx--x 2 boinc boinc      4096 Jun  4 11:29 shared
[2025-06-04 13:33:20] -rw-r--r-- 2 boinc boinc    508878 Jun  4 11:29 input.tar.gz
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:29 boinc_lockfile
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc      2521 Jun  4 11:29 pandaJob.out
[2025-06-04 13:33:20] -rw------- 1 boinc boinc    986766 Jun  4 11:30 agis_schedconf.cvmfs.json
[2025-06-04 13:33:20] -rw------- 1 boinc boinc   1603667 Jun  4 11:30 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:33:20] drwx------ 4 boinc boinc      4096 Jun  4 11:30 pilot3
[2025-06-04 13:33:20] -rw------- 1 boinc boinc        95 Jun  4 13:30 pilot_heartbeat.json
[2025-06-04 13:33:20] -rw------- 1 boinc boinc 175444584 Jun  4 13:31 HITS.45006595._007277.pool.root.1
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc       529 Jun  4 13:31 boinc_task_state.xml
[2025-06-04 13:33:20] -rw------- 1 boinc boinc      1027 Jun  4 13:31 memory_monitor_summary.json
[2025-06-04 13:33:20] -rw------- 1 boinc boinc    283778 Jun  4 13:31 log.45006595._007277.job.log.tgz.1
[2025-06-04 13:33:20] -rw------- 1 boinc boinc      7693 Jun  4 13:31 heartbeat.json
[2025-06-04 13:33:20] -rw------- 1 boinc boinc      4550 Jun  4 13:31 pilotlog.txt
[2025-06-04 13:33:20] -rw------- 1 boinc boinc    694225 Jun  4 13:31 log.45006595._007277.job.log.1
[2025-06-04 13:33:20] -rw------- 1 boinc boinc       357 Jun  4 13:31 output.list
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc       620 Jun  4 13:31 runtime_log
[2025-06-04 13:33:20] -rw------- 1 boinc boinc    993280 Jun  4 13:31 result.tar.gz
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc      9025 Jun  4 13:31 runtime_log.err
[2025-06-04 13:33:20] -rw------- 1 boinc boinc       663 Jun  4 13:31 L0lMDm7xOg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhyfKDmp15Awn.diag
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc        26 Jun  4 13:32 wrapper_checkpoint.txt
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc      8192 Jun  4 13:33 boinc_mmap_file
[2025-06-04 13:33:20] -rw-r--r-- 1 boinc boinc     20914 Jun  4 13:33 stderr.txt
[2025-06-04 13:33:20] HITS file was successfully produced:
[2025-06-04 13:33:20] -rw------- 1 boinc boinc 175444584 Jun  4 13:31 shared/HITS.pool.root.1
[2025-06-04 13:33:20]  *** Contents of shared directory: ***
[2025-06-04 13:33:20] total 381848
[2025-06-04 13:33:20] -rw-r--r-- 2 boinc boinc 214031950 Jun  4 11:29 ATLAS.root_0
[2025-06-04 13:33:20] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:29 start_atlas.sh
[2025-06-04 13:33:20] -rw-r--r-- 2 boinc boinc    508878 Jun  4 11:29 input.tar.gz
[2025-06-04 13:33:20] -rw------- 1 boinc boinc 175444584 Jun  4 13:31 HITS.pool.root.1
[2025-06-04 13:33:20] -rw------- 1 boinc boinc    993280 Jun  4 13:31 result.tar.gz
13:33:21 (907873): run_atlas exited; CPU time 28282.409556
13:33:21 (907873): called boinc_finish(0)

</stderr_txt>
]]>

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