Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:06:00 (23645): wrapper (7.7.26015): starting
04:06:00 (23645): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 04:06:00] Arguments: --nthreads 8
[2025-06-03 04:06:00] Threads: 8
[2025-06-03 04:06:00] Checking for CVMFS
[2025-06-03 04:06:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 04:06:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 04:06:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 04:06:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 04:06:02] 2.11.2.0 27033 31258 96920 146723 0 201 13106487 25165825 4636 130560 0 15657591 99.779 18778126 2338 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 04:06:02] CVMFS is ok
[2025-06-03 04:06:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:06:02] Checking for apptainer binary...
[2025-06-03 04:06:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 04:06:02] Running /usr/bin/apptainer --version
[2025-06-03 04:06:02] apptainer version 1.3.2-1.el7
[2025-06-03 04:06:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:06:12] cg-vwn443.simple-grid.lan
[2025-06-03 04:06:12] apptainer works
[2025-06-03 04:06:12] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:06:12] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:06:12] Starting ATLAS job with PandaID=6677391661
[2025-06-03 04:06:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:08:28]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:08:28] 2025-06-03 05:52:38,345 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6677391661/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 08:08:28] 2025-06-03 05:52:38,346 | INFO     | extracted standard info from prmon json
[2025-06-03 08:08:28] 2025-06-03 05:52:38,346 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:08:28] 2025-06-03 05:52:38,346 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:08:28] 2025-06-03 05:52:38,346 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:08:28] 2025-06-03 05:52:38,346 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:08:28] 2025-06-03 05:52:38,358 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:08:28] 2025-06-03 05:52:38,359 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 08:08:28] 2025-06-03 05:52:38,360 | INFO     | sum of deviations: 28358480808.00002
[2025-06-03 08:08:28] 2025-06-03 05:52:38,361 | INFO     | mean x: 1748923437.0
[2025-06-03 08:08:28] 2025-06-03 05:52:38,361 | INFO     | mean y: 2531567.0616113744
[2025-06-03 08:08:28] 2025-06-03 05:52:38,361 | INFO     | -- intersect: -17024452290.785551
[2025-06-03 08:08:28] 2025-06-03 05:52:38,361 | INFO     | intersect: -17024452290.785551
[2025-06-03 08:08:28] 2025-06-03 05:52:38,361 | INFO     | chi2: 7.650381084424207
[2025-06-03 08:08:28] 2025-06-03 05:52:38,362 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 08:08:28] 2025-06-03 05:52:38,363 | INFO     | sum of deviations: 43906525649.000046
[2025-06-03 08:08:28] 2025-06-03 05:52:38,363 | INFO     | mean x: 1748923284.5
[2025-06-03 08:08:28] 2025-06-03 05:52:38,364 | INFO     | mean y: 2543092.019417476
[2025-06-03 08:08:28] 2025-06-03 05:52:38,364 | INFO     | -- intersect: -28326374524.595448
[2025-06-03 08:08:28] 2025-06-03 05:52:38,364 | INFO     | intersect: -28326374524.595448
[2025-06-03 08:08:28] 2025-06-03 05:52:38,364 | INFO     | chi2: 6.943064520832369
[2025-06-03 08:08:28] 2025-06-03 05:52:38,364 | INFO     | current chi2=6.943064520832369 (change=9.245507586960587 %)
[2025-06-03 08:08:28] 2025-06-03 05:52:38,364 | INFO     | right removable region: 205
[2025-06-03 08:08:28] 2025-06-03 05:52:38,365 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 08:08:28] 2025-06-03 05:52:38,366 | INFO     | sum of deviations: -47414531369.5
[2025-06-03 08:08:28] 2025-06-03 05:52:38,366 | INFO     | mean x: 1748923589.5
[2025-06-03 08:08:28] 2025-06-03 05:52:38,367 | INFO     | mean y: 2588659.3932038834
[2025-06-03 08:08:28] 2025-06-03 05:52:38,367 | INFO     | -- intersect: 30594911039.441563
[2025-06-03 08:08:28] 2025-06-03 05:52:38,367 | INFO     | intersect: 30594911039.441563
[2025-06-03 08:08:28] 2025-06-03 05:52:38,367 | INFO     | chi2: 2.6596394143686313
[2025-06-03 08:08:28] 2025-06-03 05:52:38,367 | INFO     | current chi2=2.6596394143686313 (change=65.23520351445597 %)
[2025-06-03 08:08:28] 2025-06-03 05:52:38,368 | INFO     | sum of square deviations: 2518000700.0
[2025-06-03 08:08:28] 2025-06-03 05:52:38,369 | INFO     | sum of deviations: -86391297031.0
[2025-06-03 08:08:28] 2025-06-03 05:52:38,369 | INFO     | mean x: 1748923742.0
[2025-06-03 08:08:28] 2025-06-03 05:52:38,369 | INFO     | mean y: 2619326.885572139
[2025-06-03 08:08:28] 2025-06-03 05:52:38,369 | INFO     | -- intersect: 60007285123.71796
[2025-06-03 08:08:28] 2025-06-03 05:52:38,369 | INFO     | intersect: 60007285123.71796
[2025-06-03 08:08:28] 2025-06-03 05:52:38,370 | INFO     | chi2: 1.0680398394206148
[2025-06-03 08:08:28] 2025-06-03 05:52:38,370 | INFO     | current chi2=1.0680398394206148 (change=59.84268267154721 %)
[2025-06-03 08:08:28] 2025-06-03 05:52:38,370 | INFO     | sum of square deviations: 2334722845.0
[2025-06-03 08:08:28] 2025-06-03 05:52:38,372 | INFO     | sum of deviations: -92181079975.5
[2025-06-03 08:08:28] 2025-06-03 05:52:38,372 | INFO     | mean x: 1748923894.5
[2025-06-03 08:08:28] 2025-06-03 05:52:38,372 | INFO     | mean y: 2624097.9846938774
[2025-06-03 08:08:28] 2025-06-03 05:52:38,372 | INFO     | -- intersect: 69054800348.8953
[2025-06-03 08:08:28] 2025-06-03 05:52:38,372 | INFO     | intersect: 69054800348.8953
[2025-06-03 08:08:28] 2025-06-03 05:52:38,372 | INFO     | chi2: 0.9557854028989303
[2025-06-03 08:08:28] 2025-06-03 05:52:38,372 | INFO     | current chi2=0.9557854028989303 (change=10.510322965347406 %)
[2025-06-03 08:08:28] 2025-06-03 05:52:38,373 | INFO     | left removable region: 30
[2025-06-03 08:08:28] 2025-06-03 05:52:38,373 | INFO     | sum of square deviations: 1661798600.0
[2025-06-03 08:08:28] 2025-06-03 05:52:38,374 | INFO     | sum of deviations: -65308502894.99997
[2025-06-03 08:08:28] 2025-06-03 05:52:38,374 | INFO     | mean x: 1748924169.0
[2025-06-03 08:08:28] 2025-06-03 05:52:38,374 | INFO     | mean y: 2630934.057142857
[2025-06-03 08:08:28] 2025-06-03 05:52:38,374 | INFO     | -- intersect: 68735159144.31796
[2025-06-03 08:08:28] 2025-06-03 05:52:38,374 | INFO     | intersect: 68735159144.31796
[2025-06-03 08:08:28] 2025-06-03 05:52:38,375 | INFO     | chi2: 0.144645470340369
[2025-06-03 08:08:28] 2025-06-03 05:52:38,375 | INFO     | -- intersect: 68735159144.31796
[2025-06-03 08:08:28] 2025-06-03 05:52:38,375 | INFO     | current memory leak: -39.30 B/s (using 175 data points, chi2=0.14)
[2025-06-03 08:08:28] 2025-06-03 05:52:38,383 | INFO     | ..............................
[2025-06-03 08:08:28] 2025-06-03 05:52:38,383 | INFO     | . Timing measurements:
[2025-06-03 08:08:28] 2025-06-03 05:52:38,384 | INFO     | . get job = 0 s
[2025-06-03 08:08:28] 2025-06-03 05:52:38,384 | INFO     | . initial setup = 3 s
[2025-06-03 08:08:28] 2025-06-03 05:52:38,384 | INFO     | . payload setup = 148 s
[2025-06-03 08:08:28] 2025-06-03 05:52:38,384 | INFO     | . stage-in = 0 s
[2025-06-03 08:08:28] 2025-06-03 05:52:38,384 | INFO     | . payload execution = 12966 s
[2025-06-03 08:08:28] 2025-06-03 05:52:38,384 | INFO     | . stage-out = 3 s
[2025-06-03 08:08:28] 2025-06-03 05:52:38,384 | INFO     | . log creation = 1 s
[2025-06-03 08:08:28] 2025-06-03 05:52:38,384 | INFO     | ..............................
[2025-06-03 08:08:28] 2025-06-03 05:52:38,621 | INFO     | 
[2025-06-03 08:08:28] 2025-06-03 05:52:38,621 | INFO     | job summary report
[2025-06-03 08:08:28] 2025-06-03 05:52:38,621 | INFO     | --------------------------------------------------
[2025-06-03 08:08:28] 2025-06-03 05:52:38,621 | INFO     | PanDA job id: 6677391661
[2025-06-03 08:08:28] 2025-06-03 05:52:38,621 | INFO     | task id: 45006595
[2025-06-03 08:08:28] 2025-06-03 05:52:38,622 | INFO     | errors: (none)
[2025-06-03 08:08:28] 2025-06-03 05:52:38,622 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:08:28] 2025-06-03 05:52:38,622 | INFO     | pilot state: finished 
[2025-06-03 08:08:28] 2025-06-03 05:52:38,622 | INFO     | transexitcode: 0
[2025-06-03 08:08:28] 2025-06-03 05:52:38,622 | INFO     | exeerrorcode: 0
[2025-06-03 08:08:28] 2025-06-03 05:52:38,622 | INFO     | exeerrordiag: 
[2025-06-03 08:08:28] 2025-06-03 05:52:38,622 | INFO     | exitcode: 0
[2025-06-03 08:08:28] 2025-06-03 05:52:38,622 | INFO     | exitmsg: OK
[2025-06-03 08:08:28] 2025-06-03 05:52:38,622 | INFO     | cpuconsumptiontime: 47724 s
[2025-06-03 08:08:28] 2025-06-03 05:52:38,622 | INFO     | nevents: 400
[2025-06-03 08:08:28] 2025-06-03 05:52:38,622 | INFO     | neventsw: 0
[2025-06-03 08:08:28] 2025-06-03 05:52:38,622 | INFO     | pid: 6843
[2025-06-03 08:08:28] 2025-06-03 05:52:38,623 | INFO     | pgrp: 6843
[2025-06-03 08:08:28] 2025-06-03 05:52:38,623 | INFO     | corecount: 8
[2025-06-03 08:08:28] 2025-06-03 05:52:38,623 | INFO     | event service: False
[2025-06-03 08:08:28] 2025-06-03 05:52:38,623 | INFO     | sizes: {0: 2404349, 1: 2405034, 2: 2405233, 13: 2405233, 23: 2405289, 34: 2405317, 45: 2405473, 56: 2405501, 66: 2405529, 77: 2405557, 88: 2406127, 99: 2406127, 13
[2025-06-03 08:08:28] 2025-06-03 05:52:38,623 | INFO     | --------------------------------------------------
[2025-06-03 08:08:28] 2025-06-03 05:52:38,623 | INFO     | 
[2025-06-03 08:08:28] 2025-06-03 05:52:38,623 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-03 08:08:28] 2025-06-03 05:52:38,967 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,968 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,968 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,968 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,969 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:08:28] 2025-06-03 05:52:38,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,969 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:08:28] 2025-06-03 05:52:38,969 | INFO     | job 6677391661 has completed (purged errors)
[2025-06-03 08:08:28] 2025-06-03 05:52:38,970 | INFO     | overall cleanup function is called
[2025-06-03 08:08:28] 2025-06-03 05:52:39,979 | INFO     | --- collectZombieJob: --- 10, [6843]
[2025-06-03 08:08:28] 2025-06-03 05:52:39,979 | INFO     | zombie collector waiting for pid 6843
[2025-06-03 08:08:28] 2025-06-03 05:52:39,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:08:28] 2025-06-03 05:52:39,979 | INFO     | collected zombie processes
[2025-06-03 08:08:28] 2025-06-03 05:52:39,980 | INFO     | will attempt to kill all subprocesses of pid=6843
[2025-06-03 08:08:28] 2025-06-03 05:52:40,116 | INFO     | process IDs to be killed: [6843] (in reverse order)
[2025-06-03 08:08:28] 2025-06-03 05:52:41,319 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:08:28] 2025-06-03 05:52:41,319 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:08:28] 2025-06-03 05:52:41,323 | INFO     | did not find any defunct processes belonging to 6843
[2025-06-03 08:08:28] 2025-06-03 05:52:41,327 | INFO     | did not find any defunct processes belonging to 6843
[2025-06-03 08:08:28] 2025-06-03 05:52:41,327 | INFO     | ready for new job
[2025-06-03 08:08:28] 2025-06-03 05:52:41,327 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:08:28] 2025-06-03 05:52:41,329 | INFO     | **************************************
[2025-06-03 08:08:28] 2025-06-03 05:52:41,329 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:08:28] 2025-06-03 05:52:41,329 | INFO     | **************************************
[2025-06-03 08:08:28] 2025-06-03 05:52:41,329 | INFO     | 
[2025-06-03 08:08:28] 2025-06-03 05:52:41,330 | INFO     | pilot is running in a VM
[2025-06-03 08:08:28] 2025-06-03 05:52:41,330 | INFO     | architecture information:
[2025-06-03 08:08:28] 2025-06-03 05:52:41,340 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:08:28] 2025-06-03 05:52:41,592 | INFO     | cat /etc/os-release:
[2025-06-03 08:08:28] NAME="CentOS Linux"
[2025-06-03 08:08:28] VERSION="7 (Core)"
[2025-06-03 08:08:28] ID="centos"
[2025-06-03 08:08:28] ID_LIKE="rhel fedora"
[2025-06-03 08:08:28] VERSION_ID="7"
[2025-06-03 08:08:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:08:28] ANSI_COLOR="0;31"
[2025-06-03 08:08:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:08:28] HOME_URL="https://www.centos.org/"
[2025-06-03 08:08:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:08:28] 
[2025-06-03 08:08:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:08:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:08:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:08:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:08:28] 
[2025-06-03 08:08:28] 2025-06-03 05:52:41,593 | INFO     | **************************************
[2025-06-03 08:08:28] 2025-06-03 05:52:42,096 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-03 08:08:28] 2025-06-03 05:52:42,349 | INFO     | sufficient remaining disk space (496615030784 B)
[2025-06-03 08:08:28] 2025-06-03 05:52:42,349 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:08:28] 2025-06-03 05:52:42,349 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:08:28] 2025-06-03 05:52:42,349 | INFO     | update_server=False
[2025-06-03 08:08:28] 2025-06-03 05:52:42,350 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:08:28] 2025-06-03 05:52:42,352 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:08:28] 2025-06-03 05:52:42,352 | INFO     | aborting loop
[2025-06-03 08:08:28] 2025-06-03 05:52:42,957 | INFO     | all payload control threads have been joined
[2025-06-03 08:08:28] 2025-06-03 05:52:43,011 | INFO     | all data control threads have been joined
[2025-06-03 08:08:28] 2025-06-03 05:52:43,081 | INFO     | all job control threads have been joined
[2025-06-03 08:08:28] 2025-06-03 05:52:43,281 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:08:28] 2025-06-03 05:52:43,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:08:28] 2025-06-03 05:52:43,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:08:28] 2025-06-03 05:52:43,356 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:43,358 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:43,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:08:28] 2025-06-03 05:52:43,656 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:43,686 | INFO     | [job] validate thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:43,808 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:08:28] 2025-06-03 05:52:43,821 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:43,963 | INFO     | [payload] control thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:43,995 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:44,017 | INFO     | [data] control thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:44,087 | INFO     | [job] control thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:44,154 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:44,552 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:44,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:44,646 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:44,847 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:45,226 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:08:28] 2025-06-03 05:52:45,814 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:49,235 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:08:28] 2025-06-03 05:52:50,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139881532282688)>', '<ExcThread(monitor, started 139881095354112)>']
[2025-06-03 08:08:28] 2025-06-03 05:52:51,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:08:28] 2025-06-03 05:52:51,329 | INFO     | [monitor] control thread has ended
[2025-06-03 08:08:28] 2025-06-03 05:52:55,432 | INFO     | all workflow threads have been joined
[2025-06-03 08:08:28] 2025-06-03 05:52:55,432 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:08:28] 2025-06-03 05:52:55,432 | INFO     | traces error code: 0
[2025-06-03 08:08:28] 2025-06-03 05:52:55,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:08:28] 2025-06-03 05:52:55,939 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:08:28] 2025-06-03 05:52:56,033 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:08:28] 2025-06-03 05:52:56,142 [wrapper] pilotpid: 28699
[2025-06-03 08:08:28] 2025-06-03 05:52:56,183 [wrapper] Pilot exit status: 0
[2025-06-03 08:08:28] 2025-06-03 05:52:56,215 [wrapper] pandaids: 6677391661
[2025-06-03 08:08:28] 2025-06-03 05:52:57,131 [wrapper] cleanup supervisor_pilot  4334 28700
[2025-06-03 08:08:28] 2025-06-03 05:52:57,173 [wrapper] Test setup, not cleaning
[2025-06-03 08:08:28] 2025-06-03 05:52:57,257 [wrapper] apfmon messages muted
[2025-06-03 08:08:28] 2025-06-03 05:52:57,304 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:08:28] 2025-06-03 05:52:57,391 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:08:28]  *** Error codes and diagnostics ***
[2025-06-03 08:08:28]     "exeErrorCode": 0,
[2025-06-03 08:08:28]     "exeErrorDiag": "",
[2025-06-03 08:08:28]     "pilotErrorCode": 0,
[2025-06-03 08:08:28]     "pilotErrorDiag": "",
[2025-06-03 08:08:28]  *** Listing of results directory ***
[2025-06-03 08:08:28] total 387396
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-03 08:08:28] -rwx------. 1 boinc boinc     37140 Jun  2 20:22 runpilot2-wrapper.sh
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:22 queuedata.json
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc       100 Jun  3 04:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:08:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 04:06 run_atlas
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc       105 Jun  3 04:06 job.xml
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc      6391 Jun  3 04:06 init_data.xml
[2025-06-03 08:08:28] -rw-r--r--. 2 boinc boinc 214716437 Jun  3 04:06 EVNT.45006593._000294.pool.root.1
[2025-06-03 08:08:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:06 start_atlas.sh
[2025-06-03 08:08:28] drwxrwx--x. 2 boinc boinc        68 Jun  3 04:06 shared
[2025-06-03 08:08:28] -rw-r--r--. 2 boinc boinc    508875 Jun  3 04:06 input.tar.gz
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc         0 Jun  3 04:06 boinc_lockfile
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc      2521 Jun  3 04:06 pandaJob.out
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc    988081 Jun  3 04:09 agis_schedconf.cvmfs.json
[2025-06-03 08:08:28] drwx------. 4 boinc boinc      4096 Jun  3 04:09 pilot3
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc 175092348 Jun  3 07:49 HITS.45006595._007345.pool.root.1
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc       531 Jun  3 07:49 boinc_task_state.xml
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc      1017 Jun  3 07:50 memory_monitor_summary.json
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc   1603667 Jun  3 07:50 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc    382194 Jun  3 07:50 log.45006595._007345.job.log.tgz.1
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc        95 Jun  3 07:52 pilot_heartbeat.json
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc      7693 Jun  3 07:52 heartbeat.json
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc      4416 Jun  3 07:52 pilotlog.txt
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc   1144423 Jun  3 07:52 log.45006595._007345.job.log.1
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc       357 Jun  3 07:52 output.list
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc       620 Jun  3 07:52 runtime_log
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc   1546240 Jun  3 07:52 result.tar.gz
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc      8659 Jun  3 07:53 runtime_log.err
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc       656 Jun  3 07:53 OzBLDmyyOg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwyfKDmjg9KNn.diag
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc      8192 Jun  3 08:08 boinc_mmap_file
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc        28 Jun  3 08:08 wrapper_checkpoint.txt
[2025-06-03 08:08:28] -rw-r--r--. 1 boinc boinc     20515 Jun  3 08:08 stderr.txt
[2025-06-03 08:08:28] HITS file was successfully produced:
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc 175092348 Jun  3 07:49 shared/HITS.pool.root.1
[2025-06-03 08:08:28]  *** Contents of shared directory: ***
[2025-06-03 08:08:28] total 382708
[2025-06-03 08:08:28] -rw-r--r--. 2 boinc boinc 214716437 Jun  3 04:06 ATLAS.root_0
[2025-06-03 08:08:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:06 start_atlas.sh
[2025-06-03 08:08:28] -rw-r--r--. 2 boinc boinc    508875 Jun  3 04:06 input.tar.gz
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc 175092348 Jun  3 07:49 HITS.pool.root.1
[2025-06-03 08:08:28] -rw-------. 1 boinc boinc   1546240 Jun  3 07:52 result.tar.gz
08:08:30 (23645): run_atlas exited; CPU time 47901.847905
08:08:30 (23645): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN