Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:53:31 (22297): wrapper (7.7.26015): starting
05:53:31 (22297): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:53:31] Arguments: --nthreads 8
[2025-06-03 05:53:31] Threads: 8
[2025-06-03 05:53:31] Checking for CVMFS
[2025-06-03 05:53:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:53:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:53:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:53:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:53:33] 2.11.2.0 5987 31241 94088 146724 3 60 20446422 25165824 4634 130560 0 16139262 99.797 17295850 2049 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 05:53:33] CVMFS is ok
[2025-06-03 05:53:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:53:33] Checking for apptainer binary...
[2025-06-03 05:53:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:53:33] Running /usr/bin/apptainer --version
[2025-06-03 05:53:33] apptainer version 1.3.2-1.el7
[2025-06-03 05:53:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:48:28] cg-vwn288.simple-grid.lan
[2025-06-03 06:48:28] apptainer works
[2025-06-03 06:48:28] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:48:28] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:48:28] Starting ATLAS job with PandaID=6677391120
[2025-06-03 06:48:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:06:10]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:06:10] 2025-06-03 08:47:27,350 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:06:10] 2025-06-03 08:47:27,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:06:10] 2025-06-03 08:47:27,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:06:10] 2025-06-03 08:47:27,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:06:10] 2025-06-03 08:47:27,355 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:06:10] 2025-06-03 08:47:27,355 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,357 | INFO     | sum of deviations: 42911655664.999985
[2025-06-03 11:06:10] 2025-06-03 08:47:27,358 | INFO     | mean x: 1748933556.0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,358 | INFO     | mean y: 2490777.3811659194
[2025-06-03 11:06:10] 2025-06-03 08:47:27,358 | INFO     | -- intersect: -21823014257.561977
[2025-06-03 11:06:10] 2025-06-03 08:47:27,358 | INFO     | intersect: -21823014257.561977
[2025-06-03 11:06:10] 2025-06-03 08:47:27,358 | INFO     | chi2: 8.442822347190454
[2025-06-03 11:06:10] 2025-06-03 08:47:27,359 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 11:06:10] 2025-06-03 08:47:27,360 | INFO     | sum of deviations: 57652733031.0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,361 | INFO     | mean x: 1748933403.5
[2025-06-03 11:06:10] 2025-06-03 08:47:27,361 | INFO     | mean y: 2500537.339449541
[2025-06-03 11:06:10] 2025-06-03 08:47:27,361 | INFO     | -- intersect: -31384831824.433613
[2025-06-03 11:06:10] 2025-06-03 08:47:27,361 | INFO     | intersect: -31384831824.433613
[2025-06-03 11:06:10] 2025-06-03 08:47:27,361 | INFO     | chi2: 7.758832012660143
[2025-06-03 11:06:10] 2025-06-03 08:47:27,361 | INFO     | current chi2=7.758832012660143 (change=8.101441750197722 %)
[2025-06-03 11:06:10] 2025-06-03 08:47:27,362 | INFO     | right removable region: 217
[2025-06-03 11:06:10] 2025-06-03 08:47:27,362 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 11:06:10] 2025-06-03 08:47:27,364 | INFO     | sum of deviations: -37126273230.0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,364 | INFO     | mean x: 1748933708.5
[2025-06-03 11:06:10] 2025-06-03 08:47:27,364 | INFO     | mean y: 2544715.9449541285
[2025-06-03 11:06:10] 2025-06-03 08:47:27,364 | INFO     | -- intersect: 20214854162.151077
[2025-06-03 11:06:10] 2025-06-03 08:47:27,364 | INFO     | intersect: 20214854162.151077
[2025-06-03 11:06:10] 2025-06-03 08:47:27,364 | INFO     | chi2: 3.238806665748343
[2025-06-03 11:06:10] 2025-06-03 08:47:27,365 | INFO     | current chi2=3.238806665748343 (change=61.63834162842321 %)
[2025-06-03 11:06:10] 2025-06-03 08:47:27,365 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,367 | INFO     | sum of deviations: -87362102088.0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,367 | INFO     | mean x: 1748933861.0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,367 | INFO     | mean y: 2580035.4037558683
[2025-06-03 11:06:10] 2025-06-03 08:47:27,367 | INFO     | -- intersect: 50993024771.387955
[2025-06-03 11:06:10] 2025-06-03 08:47:27,367 | INFO     | intersect: 50993024771.387955
[2025-06-03 11:06:10] 2025-06-03 08:47:27,367 | INFO     | chi2: 1.0533163286777967
[2025-06-03 11:06:10] 2025-06-03 08:47:27,368 | INFO     | current chi2=1.0533163286777967 (change=67.47825858773751 %)
[2025-06-03 11:06:10] 2025-06-03 08:47:27,368 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,369 | INFO     | sum of deviations: -90691012845.5
[2025-06-03 11:06:10] 2025-06-03 08:47:27,370 | INFO     | mean x: 1748934013.5
[2025-06-03 11:06:10] 2025-06-03 08:47:27,370 | INFO     | mean y: 2582441.331730769
[2025-06-03 11:06:10] 2025-06-03 08:47:27,370 | INFO     | -- intersect: 56845882840.04355
[2025-06-03 11:06:10] 2025-06-03 08:47:27,370 | INFO     | intersect: 56845882840.04355
[2025-06-03 11:06:10] 2025-06-03 08:47:27,370 | INFO     | chi2: 0.9799563489993808
[2025-06-03 11:06:10] 2025-06-03 08:47:27,371 | INFO     | current chi2=0.9799563489993808 (change=6.964667467986846 %)
[2025-06-03 11:06:10] 2025-06-03 08:47:27,371 | INFO     | left removable region: 30
[2025-06-03 11:06:10] 2025-06-03 08:47:27,371 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,372 | INFO     | sum of deviations: -59383700323.999985
[2025-06-03 11:06:10] 2025-06-03 08:47:27,372 | INFO     | mean x: 1748934288.0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,373 | INFO     | mean y: 2583328.6256684493
[2025-06-03 11:06:10] 2025-06-03 08:47:27,373 | INFO     | -- intersect: 51223804005.841156
[2025-06-03 11:06:10] 2025-06-03 08:47:27,373 | INFO     | intersect: 51223804005.841156
[2025-06-03 11:06:10] 2025-06-03 08:47:27,373 | INFO     | chi2: 0.18764782720146428
[2025-06-03 11:06:10] 2025-06-03 08:47:27,373 | INFO     | -- intersect: 51223804005.841156
[2025-06-03 11:06:10] 2025-06-03 08:47:27,373 | INFO     | current memory leak: -29.29 B/s (using 187 data points, chi2=0.19)
[2025-06-03 11:06:10] 2025-06-03 08:47:27,374 | INFO     | ..............................
[2025-06-03 11:06:10] 2025-06-03 08:47:27,374 | INFO     | . Timing measurements:
[2025-06-03 11:06:10] 2025-06-03 08:47:27,374 | INFO     | . get job = 0 s
[2025-06-03 11:06:10] 2025-06-03 08:47:27,374 | INFO     | . initial setup = 8 s
[2025-06-03 11:06:10] 2025-06-03 08:47:27,375 | INFO     | . payload setup = 155 s
[2025-06-03 11:06:10] 2025-06-03 08:47:27,375 | INFO     | . stage-in = 0 s
[2025-06-03 11:06:10] 2025-06-03 08:47:27,375 | INFO     | . payload execution = 13712 s
[2025-06-03 11:06:10] 2025-06-03 08:47:27,375 | INFO     | . stage-out = 3 s
[2025-06-03 11:06:10] 2025-06-03 08:47:27,375 | INFO     | . log creation = 1 s
[2025-06-03 11:06:10] 2025-06-03 08:47:27,375 | INFO     | ..............................
[2025-06-03 11:06:10] 2025-06-03 08:47:27,549 | INFO     | 
[2025-06-03 11:06:10] 2025-06-03 08:47:27,550 | INFO     | job summary report
[2025-06-03 11:06:10] 2025-06-03 08:47:27,550 | INFO     | --------------------------------------------------
[2025-06-03 11:06:10] 2025-06-03 08:47:27,550 | INFO     | PanDA job id: 6677391120
[2025-06-03 11:06:10] 2025-06-03 08:47:27,550 | INFO     | task id: 45006595
[2025-06-03 11:06:10] 2025-06-03 08:47:27,550 | INFO     | errors: (none)
[2025-06-03 11:06:10] 2025-06-03 08:47:27,550 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:06:10] 2025-06-03 08:47:27,550 | INFO     | pilot state: finished 
[2025-06-03 11:06:10] 2025-06-03 08:47:27,550 | INFO     | transexitcode: 0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,550 | INFO     | exeerrorcode: 0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,551 | INFO     | exeerrordiag: 
[2025-06-03 11:06:10] 2025-06-03 08:47:27,551 | INFO     | exitcode: 0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,551 | INFO     | exitmsg: OK
[2025-06-03 11:06:10] 2025-06-03 08:47:27,551 | INFO     | cpuconsumptiontime: 50536 s
[2025-06-03 11:06:10] 2025-06-03 08:47:27,551 | INFO     | nevents: 400
[2025-06-03 11:06:10] 2025-06-03 08:47:27,551 | INFO     | neventsw: 0
[2025-06-03 11:06:10] 2025-06-03 08:47:27,551 | INFO     | pid: 4002
[2025-06-03 11:06:10] 2025-06-03 08:47:27,551 | INFO     | pgrp: 4002
[2025-06-03 11:06:10] 2025-06-03 08:47:27,551 | INFO     | corecount: 8
[2025-06-03 11:06:10] 2025-06-03 08:47:27,551 | INFO     | event service: False
[2025-06-03 11:06:10] 2025-06-03 08:47:27,551 | INFO     | sizes: {0: 2404349, 1: 2405034, 2: 2405233, 3: 2405233, 13: 2405261, 24: 2405317, 35: 2405473, 46: 2405501, 56: 2405529, 67: 2405557, 78: 2405585, 86: 2406127, 88:
[2025-06-03 11:06:10] 2025-06-03 08:47:27,551 | INFO     | --------------------------------------------------
[2025-06-03 11:06:10] 2025-06-03 08:47:27,552 | INFO     | 
[2025-06-03 11:06:10] 2025-06-03 08:47:27,552 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 11:06:10] 2025-06-03 08:47:27,729 | INFO     | PID=23826 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 11:06:10] 2025-06-03 08:47:27,730 | INFO     | .. there are 9 such processes running
[2025-06-03 11:06:10] 2025-06-03 08:47:28,010 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,010 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,010 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,010 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,011 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,011 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,011 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:06:10] 2025-06-03 08:47:28,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:06:10] 2025-06-03 08:47:28,012 | INFO     | job 6677391120 has completed (purged errors)
[2025-06-03 11:06:10] 2025-06-03 08:47:28,012 | INFO     | overall cleanup function is called
[2025-06-03 11:06:10] 2025-06-03 08:47:29,021 | INFO     | --- collectZombieJob: --- 10, [4002]
[2025-06-03 11:06:10] 2025-06-03 08:47:29,022 | INFO     | zombie collector waiting for pid 4002
[2025-06-03 11:06:10] 2025-06-03 08:47:29,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:06:10] 2025-06-03 08:47:29,022 | INFO     | collected zombie processes
[2025-06-03 11:06:10] 2025-06-03 08:47:29,022 | INFO     | will attempt to kill all subprocesses of pid=4002
[2025-06-03 11:06:10] 2025-06-03 08:47:29,139 | INFO     | process IDs to be killed: [4002] (in reverse order)
[2025-06-03 11:06:10] 2025-06-03 08:47:29,784 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:06:10] 2025-06-03 08:47:29,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:06:10] 2025-06-03 08:47:29,788 | INFO     | did not find any defunct processes belonging to 4002
[2025-06-03 11:06:10] 2025-06-03 08:47:29,791 | INFO     | did not find any defunct processes belonging to 4002
[2025-06-03 11:06:10] 2025-06-03 08:47:29,791 | INFO     | ready for new job
[2025-06-03 11:06:10] 2025-06-03 08:47:29,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:06:10] 2025-06-03 08:47:29,794 | INFO     | **************************************
[2025-06-03 11:06:10] 2025-06-03 08:47:29,794 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:06:10] 2025-06-03 08:47:29,794 | INFO     | **************************************
[2025-06-03 11:06:10] 2025-06-03 08:47:29,794 | INFO     | 
[2025-06-03 11:06:10] 2025-06-03 08:47:29,795 | INFO     | pilot is running in a VM
[2025-06-03 11:06:10] 2025-06-03 08:47:29,795 | INFO     | architecture information:
[2025-06-03 11:06:10] 2025-06-03 08:47:29,810 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:06:10] 2025-06-03 08:47:30,129 | INFO     | cat /etc/os-release:
[2025-06-03 11:06:10] NAME="CentOS Linux"
[2025-06-03 11:06:10] VERSION="7 (Core)"
[2025-06-03 11:06:10] ID="centos"
[2025-06-03 11:06:10] ID_LIKE="rhel fedora"
[2025-06-03 11:06:10] VERSION_ID="7"
[2025-06-03 11:06:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:06:10] ANSI_COLOR="0;31"
[2025-06-03 11:06:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:06:10] HOME_URL="https://www.centos.org/"
[2025-06-03 11:06:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:06:10] 
[2025-06-03 11:06:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:06:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:06:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:06:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:06:10] 
[2025-06-03 11:06:10] 2025-06-03 08:47:30,129 | INFO     | **************************************
[2025-06-03 11:06:10] 2025-06-03 08:47:30,633 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 11:06:10] 2025-06-03 08:47:30,851 | INFO     | sufficient remaining disk space (496730374144 B)
[2025-06-03 11:06:10] 2025-06-03 08:47:30,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:06:10] 2025-06-03 08:47:30,852 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:06:10] 2025-06-03 08:47:30,852 | INFO     | update_server=False
[2025-06-03 11:06:10] 2025-06-03 08:47:30,852 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:06:10] 2025-06-03 08:47:31,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:06:10] 2025-06-03 08:47:31,554 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:06:10] 2025-06-03 08:47:31,591 | INFO     | all data control threads have been joined
[2025-06-03 11:06:10] 2025-06-03 08:47:31,620 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:06:10] 2025-06-03 08:47:31,621 | INFO     | aborting loop
[2025-06-03 11:06:10] 2025-06-03 08:47:31,746 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:06:10] 2025-06-03 08:47:31,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:06:10] 2025-06-03 08:47:31,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:06:10] 2025-06-03 08:47:31,858 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:31,891 | INFO     | all payload control threads have been joined
[2025-06-03 11:06:10] 2025-06-03 08:47:31,951 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:31,990 | INFO     | [job] validate thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:32,098 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:32,129 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:32,248 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:32,509 | INFO     | all job control threads have been joined
[2025-06-03 11:06:10] 2025-06-03 08:47:32,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:06:10] 2025-06-03 08:47:32,597 | INFO     | [data] control thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:32,627 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:32,867 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:32,898 | INFO     | [payload] control thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:32,988 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:33,023 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:33,506 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:33,516 | INFO     | [job] control thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:33,552 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:35,566 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:06:10] 2025-06-03 08:47:36,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140650650015552)>', '<ExcThread(monitor, started 140650196473600)>']
[2025-06-03 11:06:10] 2025-06-03 08:47:36,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:06:10] 2025-06-03 08:47:36,776 | INFO     | [monitor] control thread has ended
[2025-06-03 11:06:10] 2025-06-03 08:47:41,143 | INFO     | all workflow threads have been joined
[2025-06-03 11:06:10] 2025-06-03 08:47:41,143 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:06:10] 2025-06-03 08:47:41,143 | INFO     | traces error code: 0
[2025-06-03 11:06:10] 2025-06-03 08:47:41,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:06:10] 2025-06-03 08:47:41,486 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:06:10] 2025-06-03 08:47:41,544 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:06:10] 2025-06-03 08:47:41,586 [wrapper] pilotpid: 23826
[2025-06-03 11:06:10] 2025-06-03 08:47:41,626 [wrapper] Pilot exit status: 0
[2025-06-03 11:06:10] 2025-06-03 08:47:41,907 [wrapper] pandaids: 6677391120
[2025-06-03 11:06:10] 2025-06-03 08:47:42,571 [wrapper] cleanup supervisor_pilot 13642 23827
[2025-06-03 11:06:10] 2025-06-03 08:47:42,654 [wrapper] Test setup, not cleaning
[2025-06-03 11:06:10] 2025-06-03 08:47:42,757 [wrapper] apfmon messages muted
[2025-06-03 11:06:10] 2025-06-03 08:47:42,804 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:06:10] 2025-06-03 08:47:42,877 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:06:10]  *** Error codes and diagnostics ***
[2025-06-03 11:06:10]     "exeErrorCode": 0,
[2025-06-03 11:06:10]     "exeErrorDiag": "",
[2025-06-03 11:06:10]     "pilotErrorCode": 0,
[2025-06-03 11:06:10]     "pilotErrorDiag": "",
[2025-06-03 11:06:10]  *** Listing of results directory ***
[2025-06-03 11:06:10] total 399380
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:12 queuedata.json
[2025-06-03 11:06:10] -rwx------. 1 boinc boinc     37140 Jun  2 20:14 runpilot2-wrapper.sh
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc       100 Jun  3 05:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:06:10] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 05:53 run_atlas
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc       105 Jun  3 05:53 job.xml
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc      6391 Jun  3 05:53 init_data.xml
[2025-06-03 11:06:10] -rw-r--r--. 2 boinc boinc 214700244 Jun  3 05:53 EVNT.45006593._000276.pool.root.1
[2025-06-03 11:06:10] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:53 start_atlas.sh
[2025-06-03 11:06:10] drwxrwx--x. 2 boinc boinc        68 Jun  3 05:53 shared
[2025-06-03 11:06:10] -rw-r--r--. 2 boinc boinc    508874 Jun  3 05:53 input.tar.gz
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc         0 Jun  3 05:53 boinc_lockfile
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc      2521 Jun  3 06:48 pandaJob.out
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc    988073 Jun  3 06:51 agis_schedconf.cvmfs.json
[2025-06-03 11:06:10] drwx------. 4 boinc boinc      4096 Jun  3 06:51 pilot3
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc 187236555 Jun  3 10:44 HITS.45006595._006899.pool.root.1
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc       531 Jun  3 10:44 boinc_task_state.xml
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc      1016 Jun  3 10:45 memory_monitor_summary.json
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc   1603667 Jun  3 10:45 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc    394819 Jun  3 10:45 log.45006595._006899.job.log.tgz.1
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc        95 Jun  3 10:46 pilot_heartbeat.json
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc      7703 Jun  3 10:47 heartbeat.json
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc      4416 Jun  3 10:47 pilotlog.txt
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc   1204454 Jun  3 10:47 log.45006595._006899.job.log.1
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc       357 Jun  3 10:47 output.list
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc       620 Jun  3 10:47 runtime_log
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc   1617920 Jun  3 10:47 result.tar.gz
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc      8659 Jun  3 10:47 runtime_log.err
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc       657 Jun  3 10:47 RlPKDmwqOg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnwfKDmGgHVem.diag
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc      8192 Jun  3 11:06 boinc_mmap_file
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc        28 Jun  3 11:06 wrapper_checkpoint.txt
[2025-06-03 11:06:10] -rw-r--r--. 1 boinc boinc     20576 Jun  3 11:06 stderr.txt
[2025-06-03 11:06:10] HITS file was successfully produced:
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc 187236555 Jun  3 10:44 shared/HITS.pool.root.1
[2025-06-03 11:06:10]  *** Contents of shared directory: ***
[2025-06-03 11:06:10] total 394620
[2025-06-03 11:06:10] -rw-r--r--. 2 boinc boinc 214700244 Jun  3 05:53 ATLAS.root_0
[2025-06-03 11:06:10] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:53 start_atlas.sh
[2025-06-03 11:06:10] -rw-r--r--. 2 boinc boinc    508874 Jun  3 05:53 input.tar.gz
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc 187236555 Jun  3 10:44 HITS.pool.root.1
[2025-06-03 11:06:10] -rw-------. 1 boinc boinc   1617920 Jun  3 10:47 result.tar.gz
11:06:12 (22297): run_atlas exited; CPU time 50727.107522
11:06:12 (22297): called boinc_finish(0)

</stderr_txt>
]]>

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