Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:21:40 (17018): wrapper (7.7.26015): starting
07:21:40 (17018): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:21:40] Arguments: --nthreads 8
[2025-06-03 07:21:40] Threads: 8
[2025-06-03 07:21:40] Checking for CVMFS
[2025-06-03 07:21:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:21:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:21:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:21:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:21:42] 2.11.2.0 20118 31354 91708 146729 3 114 13094443 25165825 4354 130560 0 15572350 99.817 17713304 1946 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 07:21:42] CVMFS is ok
[2025-06-03 07:21:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:21:42] Checking for apptainer binary...
[2025-06-03 07:21:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:21:42] Running /usr/bin/apptainer --version
[2025-06-03 07:21:42] apptainer version 1.3.2-1.el7
[2025-06-03 07:21:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:21:44] cg-vwn344.simple-grid.lan
[2025-06-03 07:21:44] apptainer works
[2025-06-03 07:21:44] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:21:44] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:21:44] Starting ATLAS job with PandaID=6677391466
[2025-06-03 07:21:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:17:29]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:17:29] 2025-06-03 09:11:46,297 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677391466/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:17:29] 2025-06-03 09:11:46,298 | INFO     | extracted standard info from prmon json
[2025-06-03 11:17:29] 2025-06-03 09:11:46,298 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:17:29] 2025-06-03 09:11:46,298 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:17:29] 2025-06-03 09:11:46,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:17:29] 2025-06-03 09:11:46,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:17:29] 2025-06-03 09:11:46,306 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:17:29] 2025-06-03 09:11:46,307 | INFO     | sum of square deviations: 3485088600.0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,312 | INFO     | sum of deviations: -40158032186.50001
[2025-06-03 11:17:29] 2025-06-03 09:11:46,312 | INFO     | mean x: 1748934989.5
[2025-06-03 11:17:29] 2025-06-03 09:11:46,312 | INFO     | mean y: 2526139.379464286
[2025-06-03 11:17:29] 2025-06-03 09:11:46,313 | INFO     | -- intersect: 20155180967.275963
[2025-06-03 11:17:29] 2025-06-03 09:11:46,313 | INFO     | intersect: 20155180967.275963
[2025-06-03 11:17:29] 2025-06-03 09:11:46,313 | INFO     | chi2: 2.730853655308151
[2025-06-03 11:17:29] 2025-06-03 09:11:46,314 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,318 | INFO     | sum of deviations: -24093213554.0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,319 | INFO     | mean x: 1748934837.0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,319 | INFO     | mean y: 2536696.621004566
[2025-06-03 11:17:29] 2025-06-03 09:11:46,319 | INFO     | -- intersect: 12940521758.829697
[2025-06-03 11:17:29] 2025-06-03 09:11:46,319 | INFO     | intersect: 12940521758.829697
[2025-06-03 11:17:29] 2025-06-03 09:11:46,320 | INFO     | chi2: 1.967421325058782
[2025-06-03 11:17:29] 2025-06-03 09:11:46,320 | INFO     | current chi2=1.967421325058782 (change=27.955812599676744 %)
[2025-06-03 11:17:29] 2025-06-03 09:11:46,320 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 11:17:29] 2025-06-03 09:11:46,325 | INFO     | sum of deviations: -22983114539.500008
[2025-06-03 11:17:29] 2025-06-03 09:11:46,325 | INFO     | mean x: 1748934684.5
[2025-06-03 11:17:29] 2025-06-03 09:11:46,325 | INFO     | mean y: 2537473.228971963
[2025-06-03 11:17:29] 2025-06-03 09:11:46,325 | INFO     | -- intersect: 13229868168.152342
[2025-06-03 11:17:29] 2025-06-03 09:11:46,326 | INFO     | intersect: 13229868168.152342
[2025-06-03 11:17:29] 2025-06-03 09:11:46,326 | INFO     | chi2: 1.9662174207239915
[2025-06-03 11:17:29] 2025-06-03 09:11:46,326 | INFO     | current chi2=1.9662174207239915 (change=0.06119199377664981 %)
[2025-06-03 11:17:29] 2025-06-03 09:11:46,326 | INFO     | right removable region: 213
[2025-06-03 11:17:29] 2025-06-03 09:11:46,327 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,332 | INFO     | sum of deviations: -80385229345.0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,332 | INFO     | mean x: 1748935142.0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,332 | INFO     | mean y: 2552801.6255707764
[2025-06-03 11:17:29] 2025-06-03 09:11:46,332 | INFO     | -- intersect: 43169192881.76097
[2025-06-03 11:17:29] 2025-06-03 09:11:46,333 | INFO     | intersect: 43169192881.76097
[2025-06-03 11:17:29] 2025-06-03 09:11:46,333 | INFO     | chi2: 1.0252339985875418
[2025-06-03 11:17:29] 2025-06-03 09:11:46,333 | INFO     | current chi2=1.0252339985875418 (change=62.45738043872389 %)
[2025-06-03 11:17:29] 2025-06-03 09:11:46,333 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 11:17:29] 2025-06-03 09:11:46,338 | INFO     | sum of deviations: -79204788424.5
[2025-06-03 11:17:29] 2025-06-03 09:11:46,339 | INFO     | mean x: 1748935294.5
[2025-06-03 11:17:29] 2025-06-03 09:11:46,339 | INFO     | mean y: 2551937.640186916
[2025-06-03 11:17:29] 2025-06-03 09:11:46,339 | INFO     | -- intersect: 45586813057.74521
[2025-06-03 11:17:29] 2025-06-03 09:11:46,339 | INFO     | intersect: 45586813057.74521
[2025-06-03 11:17:29] 2025-06-03 09:11:46,340 | INFO     | chi2: 1.003557998791438
[2025-06-03 11:17:29] 2025-06-03 09:11:46,340 | INFO     | current chi2=1.003557998791438 (change=2.1142490227564323 %)
[2025-06-03 11:17:29] 2025-06-03 09:11:46,340 | INFO     | left removable region: 20
[2025-06-03 11:17:29] 2025-06-03 09:11:46,340 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,341 | INFO     | sum of deviations: -49162330118.0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,342 | INFO     | mean x: 1748935264.0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,342 | INFO     | mean y: 2555722.3937823833
[2025-06-03 11:17:29] 2025-06-03 09:11:46,342 | INFO     | -- intersect: 38574142162.44421
[2025-06-03 11:17:29] 2025-06-03 09:11:46,342 | INFO     | intersect: 38574142162.44421
[2025-06-03 11:17:29] 2025-06-03 09:11:46,342 | INFO     | chi2: 0.2009307388854724
[2025-06-03 11:17:29] 2025-06-03 09:11:46,342 | INFO     | -- intersect: 38574142162.44421
[2025-06-03 11:17:29] 2025-06-03 09:11:46,347 | INFO     | current memory leak: -22.05 B/s (using 193 data points, chi2=0.20)
[2025-06-03 11:17:29] 2025-06-03 09:11:46,348 | INFO     | ..............................
[2025-06-03 11:17:29] 2025-06-03 09:11:46,348 | INFO     | . Timing measurements:
[2025-06-03 11:17:29] 2025-06-03 09:11:46,348 | INFO     | . get job = 0 s
[2025-06-03 11:17:29] 2025-06-03 09:11:46,348 | INFO     | . initial setup = 2 s
[2025-06-03 11:17:29] 2025-06-03 09:11:46,348 | INFO     | . payload setup = 15 s
[2025-06-03 11:17:29] 2025-06-03 09:11:46,348 | INFO     | . stage-in = 0 s
[2025-06-03 11:17:29] 2025-06-03 09:11:46,349 | INFO     | . payload execution = 13643 s
[2025-06-03 11:17:29] 2025-06-03 09:11:46,349 | INFO     | . stage-out = 4 s
[2025-06-03 11:17:29] 2025-06-03 09:11:46,349 | INFO     | . log creation = 1 s
[2025-06-03 11:17:29] 2025-06-03 09:11:46,349 | INFO     | ..............................
[2025-06-03 11:17:29] 2025-06-03 09:11:46,512 | INFO     | 
[2025-06-03 11:17:29] 2025-06-03 09:11:46,512 | INFO     | job summary report
[2025-06-03 11:17:29] 2025-06-03 09:11:46,512 | INFO     | --------------------------------------------------
[2025-06-03 11:17:29] 2025-06-03 09:11:46,512 | INFO     | PanDA job id: 6677391466
[2025-06-03 11:17:29] 2025-06-03 09:11:46,512 | INFO     | task id: 45006595
[2025-06-03 11:17:29] 2025-06-03 09:11:46,512 | INFO     | errors: (none)
[2025-06-03 11:17:29] 2025-06-03 09:11:46,512 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:17:29] 2025-06-03 09:11:46,512 | INFO     | pilot state: finished 
[2025-06-03 11:17:29] 2025-06-03 09:11:46,513 | INFO     | transexitcode: 0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,513 | INFO     | exeerrorcode: 0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,513 | INFO     | exeerrordiag: 
[2025-06-03 11:17:29] 2025-06-03 09:11:46,513 | INFO     | exitcode: 0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,513 | INFO     | exitmsg: OK
[2025-06-03 11:17:29] 2025-06-03 09:11:46,513 | INFO     | cpuconsumptiontime: 51307 s
[2025-06-03 11:17:29] 2025-06-03 09:11:46,513 | INFO     | nevents: 400
[2025-06-03 11:17:29] 2025-06-03 09:11:46,513 | INFO     | neventsw: 0
[2025-06-03 11:17:29] 2025-06-03 09:11:46,513 | INFO     | pid: 30128
[2025-06-03 11:17:29] 2025-06-03 09:11:46,513 | INFO     | pgrp: 30128
[2025-06-03 11:17:29] 2025-06-03 09:11:46,513 | INFO     | corecount: 8
[2025-06-03 11:17:29] 2025-06-03 09:11:46,513 | INFO     | event service: False
[2025-06-03 11:17:29] 2025-06-03 09:11:46,514 | INFO     | sizes: {0: 2405177, 1: 2405177, 11: 2405411, 12: 2405439, 13664: 2435163, 13668: 2444288, 13759: 2444402}
[2025-06-03 11:17:29] 2025-06-03 09:11:46,514 | INFO     | --------------------------------------------------
[2025-06-03 11:17:29] 2025-06-03 09:11:46,514 | INFO     | 
[2025-06-03 11:17:29] 2025-06-03 09:11:46,514 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 11:17:29] 2025-06-03 09:11:47,102 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,102 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,102 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,102 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,102 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,102 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,103 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,103 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,103 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,103 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,103 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,103 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,103 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,103 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,103 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,103 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,104 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,104 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:17:29] 2025-06-03 09:11:47,104 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,104 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:17:29] 2025-06-03 09:11:47,104 | INFO     | job 6677391466 has completed (purged errors)
[2025-06-03 11:17:29] 2025-06-03 09:11:47,104 | INFO     | overall cleanup function is called
[2025-06-03 11:17:29] 2025-06-03 09:11:48,114 | INFO     | --- collectZombieJob: --- 10, [30128]
[2025-06-03 11:17:29] 2025-06-03 09:11:48,114 | INFO     | zombie collector waiting for pid 30128
[2025-06-03 11:17:29] 2025-06-03 09:11:48,114 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:17:29] 2025-06-03 09:11:48,114 | INFO     | collected zombie processes
[2025-06-03 11:17:29] 2025-06-03 09:11:48,115 | INFO     | will attempt to kill all subprocesses of pid=30128
[2025-06-03 11:17:29] 2025-06-03 09:11:48,239 | INFO     | process IDs to be killed: [30128] (in reverse order)
[2025-06-03 11:17:29] 2025-06-03 09:11:48,814 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:17:29] 2025-06-03 09:11:48,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:17:29] 2025-06-03 09:11:48,818 | INFO     | did not find any defunct processes belonging to 30128
[2025-06-03 11:17:29] 2025-06-03 09:11:48,821 | INFO     | did not find any defunct processes belonging to 30128
[2025-06-03 11:17:29] 2025-06-03 09:11:48,822 | INFO     | ready for new job
[2025-06-03 11:17:29] 2025-06-03 09:11:48,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:17:29] 2025-06-03 09:11:48,827 | INFO     | **************************************
[2025-06-03 11:17:29] 2025-06-03 09:11:48,828 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:17:29] 2025-06-03 09:11:48,828 | INFO     | **************************************
[2025-06-03 11:17:29] 2025-06-03 09:11:48,828 | INFO     | 
[2025-06-03 11:17:29] 2025-06-03 09:11:48,828 | INFO     | pilot is running in a VM
[2025-06-03 11:17:29] 2025-06-03 09:11:48,829 | INFO     | architecture information:
[2025-06-03 11:17:29] 2025-06-03 09:11:48,832 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:17:29] 2025-06-03 09:11:49,030 | INFO     | cat /etc/os-release:
[2025-06-03 11:17:29] NAME="CentOS Linux"
[2025-06-03 11:17:29] VERSION="7 (Core)"
[2025-06-03 11:17:29] ID="centos"
[2025-06-03 11:17:29] ID_LIKE="rhel fedora"
[2025-06-03 11:17:29] VERSION_ID="7"
[2025-06-03 11:17:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:17:29] ANSI_COLOR="0;31"
[2025-06-03 11:17:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:17:29] HOME_URL="https://www.centos.org/"
[2025-06-03 11:17:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:17:29] 
[2025-06-03 11:17:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:17:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:17:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:17:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:17:29] 
[2025-06-03 11:17:29] 2025-06-03 09:11:49,031 | INFO     | **************************************
[2025-06-03 11:17:29] 2025-06-03 09:11:49,534 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 11:17:29] 2025-06-03 09:11:49,765 | INFO     | sufficient remaining disk space (496631808000 B)
[2025-06-03 11:17:29] 2025-06-03 09:11:49,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:17:29] 2025-06-03 09:11:49,766 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:17:29] 2025-06-03 09:11:49,766 | INFO     | update_server=False
[2025-06-03 11:17:29] 2025-06-03 09:11:49,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:17:29] 2025-06-03 09:11:49,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:17:29] 2025-06-03 09:11:49,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:17:29] 2025-06-03 09:11:49,775 | INFO     | aborting loop
[2025-06-03 11:17:29] 2025-06-03 09:11:50,317 | INFO     | all data control threads have been joined
[2025-06-03 11:17:29] 2025-06-03 09:11:50,657 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:17:29] 2025-06-03 09:11:50,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:17:29] 2025-06-03 09:11:50,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:17:29] 2025-06-03 09:11:50,727 | INFO     | all payload control threads have been joined
[2025-06-03 11:17:29] 2025-06-03 09:11:50,773 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:50,780 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:50,790 | INFO     | [job] validate thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:50,816 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:50,842 | INFO     | all job control threads have been joined
[2025-06-03 11:17:29] 2025-06-03 09:11:50,866 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:50,866 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:51,067 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:51,323 | INFO     | [data] control thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:51,407 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:51,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:17:29] 2025-06-03 09:11:51,733 | INFO     | [payload] control thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:51,774 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:51,848 | INFO     | [job] control thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:52,160 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:52,237 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:52,532 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:52,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:17:29] 2025-06-03 09:11:56,795 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:17:29] 2025-06-03 09:11:57,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702479480640)>', '<ExcThread(monitor, started 139701595928320)>']
[2025-06-03 11:17:29] 2025-06-03 09:11:57,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:17:29] 2025-06-03 09:11:57,700 | INFO     | [monitor] control thread has ended
[2025-06-03 11:17:29] 2025-06-03 09:12:02,693 | INFO     | all workflow threads have been joined
[2025-06-03 11:17:29] 2025-06-03 09:12:02,693 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:17:29] 2025-06-03 09:12:02,694 | INFO     | traces error code: 0
[2025-06-03 11:17:29] 2025-06-03 09:12:02,694 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:17:29] 2025-06-03 09:12:02,989 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:17:29] 2025-06-03 09:12:03,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:17:29] 2025-06-03 09:12:03,045 [wrapper] pilotpid: 21539
[2025-06-03 11:17:29] 2025-06-03 09:12:03,058 [wrapper] Pilot exit status: 0
[2025-06-03 11:17:29] 2025-06-03 09:12:03,518 [wrapper] pandaids: 6677391466
[2025-06-03 11:17:29] 2025-06-03 09:12:04,178 [wrapper] cleanup supervisor_pilot 18362 21540
[2025-06-03 11:17:29] 2025-06-03 09:12:04,280 [wrapper] Test setup, not cleaning
[2025-06-03 11:17:29] 2025-06-03 09:12:04,351 [wrapper] apfmon messages muted
[2025-06-03 11:17:29] 2025-06-03 09:12:04,444 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:17:29] 2025-06-03 09:12:04,532 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:17:29]  *** Error codes and diagnostics ***
[2025-06-03 11:17:29]     "exeErrorCode": 0,
[2025-06-03 11:17:29]     "exeErrorDiag": "",
[2025-06-03 11:17:29]     "pilotErrorCode": 0,
[2025-06-03 11:17:29]     "pilotErrorDiag": "",
[2025-06-03 11:17:29]  *** Listing of results directory ***
[2025-06-03 11:17:29] total 396664
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:14 queuedata.json
[2025-06-03 11:17:29] -rwx------. 1 boinc boinc     37140 Jun  2 20:16 runpilot2-wrapper.sh
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc       100 Jun  3 07:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:17:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 07:21 run_atlas
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc       105 Jun  3 07:21 job.xml
[2025-06-03 11:17:29] -rw-r--r--. 2 boinc boinc 214305592 Jun  3 07:21 EVNT.45006593._000286.pool.root.1
[2025-06-03 11:17:29] drwxrwx--x. 2 boinc boinc        68 Jun  3 07:21 shared
[2025-06-03 11:17:29] -rw-r--r--. 2 boinc boinc    508878 Jun  3 07:21 input.tar.gz
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc      6391 Jun  3 07:21 init_data.xml
[2025-06-03 11:17:29] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:21 start_atlas.sh
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc         0 Jun  3 07:21 boinc_lockfile
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc      2521 Jun  3 07:21 pandaJob.out
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc    988073 Jun  3 07:22 agis_schedconf.cvmfs.json
[2025-06-03 11:17:29] drwx------. 4 boinc boinc      4096 Jun  3 07:22 pilot3
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc 184883000 Jun  3 11:08 HITS.45006595._007150.pool.root.1
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc       531 Jun  3 11:09 boinc_task_state.xml
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc      1020 Jun  3 11:10 memory_monitor_summary.json
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc   1603667 Jun  3 11:10 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc    395822 Jun  3 11:10 log.45006595._007150.job.log.tgz.1
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc        95 Jun  3 11:11 pilot_heartbeat.json
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc      7693 Jun  3 11:11 heartbeat.json
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc      4416 Jun  3 11:12 pilotlog.txt
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc   1191625 Jun  3 11:12 log.45006595._007150.job.log.1
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc       357 Jun  3 11:12 output.list
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc       620 Jun  3 11:12 runtime_log
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc   1607680 Jun  3 11:12 result.tar.gz
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc      8659 Jun  3 11:12 runtime_log.err
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc       656 Jun  3 11:12 ftYNDmisOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmC9VKDmPDO3Dm.diag
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc      8192 Jun  3 11:17 boinc_mmap_file
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc        28 Jun  3 11:17 wrapper_checkpoint.txt
[2025-06-03 11:17:29] -rw-r--r--. 1 boinc boinc     20461 Jun  3 11:17 stderr.txt
[2025-06-03 11:17:29] HITS file was successfully produced:
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc 184883000 Jun  3 11:08 shared/HITS.pool.root.1
[2025-06-03 11:17:29]  *** Contents of shared directory: ***
[2025-06-03 11:17:29] total 391924
[2025-06-03 11:17:29] -rw-r--r--. 2 boinc boinc 214305592 Jun  3 07:21 ATLAS.root_0
[2025-06-03 11:17:29] -rw-r--r--. 2 boinc boinc    508878 Jun  3 07:21 input.tar.gz
[2025-06-03 11:17:29] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:21 start_atlas.sh
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc 184883000 Jun  3 11:08 HITS.pool.root.1
[2025-06-03 11:17:29] -rw-------. 1 boinc boinc   1607680 Jun  3 11:12 result.tar.gz
11:17:31 (17018): run_atlas exited; CPU time 51472.544059
11:17:31 (17018): called boinc_finish(0)

</stderr_txt>
]]>

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