Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:47:07 (25436): wrapper (7.7.26015): starting
00:47:07 (25436): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 00:47:07] Arguments: --nthreads 8
[2025-06-03 00:47:07] Threads: 8
[2025-06-03 00:47:07] Checking for CVMFS
[2025-06-03 00:47:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 00:47:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 00:47:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 00:47:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 00:47:10] 2.11.2.0 9832 30935 89060 146722 3 14 22147499 25165825 4633 130560 0 16557622 99.839 16673740 2035 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 00:47:10] CVMFS is ok
[2025-06-03 00:47:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 00:47:10] Checking for apptainer binary...
[2025-06-03 00:47:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 00:47:10] Running /usr/bin/apptainer --version
[2025-06-03 00:47:10] apptainer version 1.3.2-1.el7
[2025-06-03 00:47:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 01:18:00] cg-vwn287.simple-grid.lan
[2025-06-03 01:18:00] apptainer works
[2025-06-03 01:18:00] Set ATHENA_PROC_NUMBER=8
[2025-06-03 01:18:00] Set ATHENA_CORE_NUMBER=8
[2025-06-03 01:18:00] Starting ATLAS job with PandaID=6677391271
[2025-06-03 01:18:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:18:35]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:18:35] 2025-06-03 03:05:13,658 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6677391271/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:18:35] 2025-06-03 03:05:13,659 | INFO     | extracted standard info from prmon json
[2025-06-03 05:18:35] 2025-06-03 03:05:13,659 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:18:35] 2025-06-03 03:05:13,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:18:35] 2025-06-03 03:05:13,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:18:35] 2025-06-03 03:05:13,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:18:35] 2025-06-03 03:05:13,671 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:18:35] 2025-06-03 03:05:13,672 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 05:18:35] 2025-06-03 03:05:13,673 | INFO     | sum of deviations: -15312148416.500006
[2025-06-03 05:18:35] 2025-06-03 03:05:13,674 | INFO     | mean x: 1748913210.5
[2025-06-03 05:18:35] 2025-06-03 03:05:13,674 | INFO     | mean y: 2489406.902777778
[2025-06-03 05:18:35] 2025-06-03 03:05:13,674 | INFO     | -- intersect: 8572355170.573547
[2025-06-03 05:18:35] 2025-06-03 03:05:13,674 | INFO     | intersect: 8572355170.573547
[2025-06-03 05:18:35] 2025-06-03 03:05:13,674 | INFO     | chi2: 2.488973707483368
[2025-06-03 05:18:35] 2025-06-03 03:05:13,675 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 05:18:35] 2025-06-03 03:05:13,677 | INFO     | sum of deviations: -705799463.0000105
[2025-06-03 05:18:35] 2025-06-03 03:05:13,677 | INFO     | mean x: 1748913058.0
[2025-06-03 05:18:35] 2025-06-03 03:05:13,677 | INFO     | mean y: 2499720.644549763
[2025-06-03 05:18:35] 2025-06-03 03:05:13,677 | INFO     | -- intersect: 426272941.2901248
[2025-06-03 05:18:35] 2025-06-03 03:05:13,677 | INFO     | intersect: 426272941.2901248
[2025-06-03 05:18:35] 2025-06-03 03:05:13,678 | INFO     | chi2: 1.7199236800565887
[2025-06-03 05:18:35] 2025-06-03 03:05:13,678 | INFO     | current chi2=1.7199236800565887 (change=30.898278479782547 %)
[2025-06-03 05:18:35] 2025-06-03 03:05:13,678 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 05:18:35] 2025-06-03 03:05:13,680 | INFO     | sum of deviations: -584187758.5000027
[2025-06-03 05:18:35] 2025-06-03 03:05:13,680 | INFO     | mean x: 1748912905.5
[2025-06-03 05:18:35] 2025-06-03 03:05:13,680 | INFO     | mean y: 2499812.3834951455
[2025-06-03 05:18:35] 2025-06-03 03:05:13,680 | INFO     | -- intersect: 379421202.2216704
[2025-06-03 05:18:35] 2025-06-03 03:05:13,681 | INFO     | intersect: 379421202.2216704
[2025-06-03 05:18:35] 2025-06-03 03:05:13,681 | INFO     | chi2: 1.7200634728381194
[2025-06-03 05:18:35] 2025-06-03 03:05:13,681 | INFO     | current chi2=1.7200634728381194 (change=-0.008127847947657597 %)
[2025-06-03 05:18:35] 2025-06-03 03:05:13,681 | INFO     | right removable region: 205
[2025-06-03 05:18:35] 2025-06-03 03:05:13,682 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 05:18:35] 2025-06-03 03:05:13,683 | INFO     | sum of deviations: -49112370386.0
[2025-06-03 05:18:35] 2025-06-03 03:05:13,683 | INFO     | mean x: 1748913363.0
[2025-06-03 05:18:35] 2025-06-03 03:05:13,683 | INFO     | mean y: 2513479.55450237
[2025-06-03 05:18:35] 2025-06-03 03:05:13,684 | INFO     | -- intersect: 29490366747.573135
[2025-06-03 05:18:35] 2025-06-03 03:05:13,684 | INFO     | intersect: 29490366747.573135
[2025-06-03 05:18:35] 2025-06-03 03:05:13,684 | INFO     | chi2: 0.9977530791634526
[2025-06-03 05:18:35] 2025-06-03 03:05:13,684 | INFO     | current chi2=0.9977530791634526 (change=59.91307275912155 %)
[2025-06-03 05:18:35] 2025-06-03 03:05:13,685 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 05:18:35] 2025-06-03 03:05:13,686 | INFO     | sum of deviations: -50298775337.5
[2025-06-03 05:18:35] 2025-06-03 03:05:13,686 | INFO     | mean x: 1748913515.5
[2025-06-03 05:18:35] 2025-06-03 03:05:13,686 | INFO     | mean y: 2514348.645631068
[2025-06-03 05:18:35] 2025-06-03 03:05:13,686 | INFO     | -- intersect: 32455592394.326588
[2025-06-03 05:18:35] 2025-06-03 03:05:13,686 | INFO     | intersect: 32455592394.326588
[2025-06-03 05:18:35] 2025-06-03 03:05:13,687 | INFO     | chi2: 0.9770864287498877
[2025-06-03 05:18:35] 2025-06-03 03:05:13,687 | INFO     | current chi2=0.9770864287498877 (change=2.0713191314721295 %)
[2025-06-03 05:18:35] 2025-06-03 03:05:13,687 | INFO     | left removable region: 20
[2025-06-03 05:18:35] 2025-06-03 03:05:13,687 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 05:18:35] 2025-06-03 03:05:13,689 | INFO     | sum of deviations: -22526714156.000004
[2025-06-03 05:18:35] 2025-06-03 03:05:13,689 | INFO     | mean x: 1748913485.0
[2025-06-03 05:18:35] 2025-06-03 03:05:13,689 | INFO     | mean y: 2515832.789189189
[2025-06-03 05:18:35] 2025-06-03 03:05:13,689 | INFO     | -- intersect: 20069645412.677788
[2025-06-03 05:18:35] 2025-06-03 03:05:13,689 | INFO     | intersect: 20069645412.677788
[2025-06-03 05:18:35] 2025-06-03 03:05:13,689 | INFO     | chi2: 0.156262122918667
[2025-06-03 05:18:35] 2025-06-03 03:05:13,690 | INFO     | -- intersect: 20069645412.677788
[2025-06-03 05:18:35] 2025-06-03 03:05:13,690 | INFO     | current memory leak: -11.47 B/s (using 185 data points, chi2=0.16)
[2025-06-03 05:18:35] 2025-06-03 03:05:13,691 | INFO     | ..............................
[2025-06-03 05:18:35] 2025-06-03 03:05:13,691 | INFO     | . Timing measurements:
[2025-06-03 05:18:35] 2025-06-03 03:05:13,691 | INFO     | . get job = 0 s
[2025-06-03 05:18:35] 2025-06-03 03:05:13,691 | INFO     | . initial setup = 7 s
[2025-06-03 05:18:35] 2025-06-03 03:05:13,691 | INFO     | . payload setup = 22 s
[2025-06-03 05:18:35] 2025-06-03 03:05:13,691 | INFO     | . stage-in = 0 s
[2025-06-03 05:18:35] 2025-06-03 03:05:13,691 | INFO     | . payload execution = 13171 s
[2025-06-03 05:18:35] 2025-06-03 03:05:13,691 | INFO     | . stage-out = 4 s
[2025-06-03 05:18:35] 2025-06-03 03:05:13,691 | INFO     | . log creation = 1 s
[2025-06-03 05:18:35] 2025-06-03 03:05:13,691 | INFO     | ..............................
[2025-06-03 05:18:35] 2025-06-03 03:05:13,958 | INFO     | 
[2025-06-03 05:18:35] 2025-06-03 03:05:13,958 | INFO     | job summary report
[2025-06-03 05:18:35] 2025-06-03 03:05:13,958 | INFO     | --------------------------------------------------
[2025-06-03 05:18:35] 2025-06-03 03:05:13,959 | INFO     | PanDA job id: 6677391271
[2025-06-03 05:18:35] 2025-06-03 03:05:13,959 | INFO     | task id: 45006595
[2025-06-03 05:18:35] 2025-06-03 03:05:13,959 | INFO     | errors: (none)
[2025-06-03 05:18:35] 2025-06-03 03:05:13,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:18:35] 2025-06-03 03:05:13,959 | INFO     | pilot state: finished 
[2025-06-03 05:18:35] 2025-06-03 03:05:13,959 | INFO     | transexitcode: 0
[2025-06-03 05:18:35] 2025-06-03 03:05:13,959 | INFO     | exeerrorcode: 0
[2025-06-03 05:18:35] 2025-06-03 03:05:13,959 | INFO     | exeerrordiag: 
[2025-06-03 05:18:35] 2025-06-03 03:05:13,959 | INFO     | exitcode: 0
[2025-06-03 05:18:35] 2025-06-03 03:05:13,959 | INFO     | exitmsg: OK
[2025-06-03 05:18:35] 2025-06-03 03:05:13,960 | INFO     | cpuconsumptiontime: 48979 s
[2025-06-03 05:18:35] 2025-06-03 03:05:13,960 | INFO     | nevents: 400
[2025-06-03 05:18:35] 2025-06-03 03:05:13,960 | INFO     | neventsw: 0
[2025-06-03 05:18:35] 2025-06-03 03:05:13,960 | INFO     | pid: 28158
[2025-06-03 05:18:35] 2025-06-03 03:05:13,960 | INFO     | pgrp: 28158
[2025-06-03 05:18:35] 2025-06-03 03:05:13,960 | INFO     | corecount: 8
[2025-06-03 05:18:35] 2025-06-03 03:05:13,960 | INFO     | event service: False
[2025-06-03 05:18:35] 2025-06-03 03:05:13,960 | INFO     | sizes: {0: 2404349, 1: 2405035, 2: 2405234, 13: 2405234, 24: 2405290, 34: 2405318, 45: 2405474, 56: 2405502, 66: 2405530, 77: 2405558, 81: 2405820, 88: 2406128, 13
[2025-06-03 05:18:35] 2025-06-03 03:05:13,960 | INFO     | --------------------------------------------------
[2025-06-03 05:18:35] 2025-06-03 03:05:13,960 | INFO     | 
[2025-06-03 05:18:35] 2025-06-03 03:05:13,960 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-03 05:18:35] 2025-06-03 03:05:14,576 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,577 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,577 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,577 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,578 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:18:35] 2025-06-03 03:05:14,578 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,579 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:18:35] 2025-06-03 03:05:14,579 | INFO     | job 6677391271 has completed (purged errors)
[2025-06-03 05:18:35] 2025-06-03 03:05:14,579 | INFO     | overall cleanup function is called
[2025-06-03 05:18:35] 2025-06-03 03:05:15,588 | INFO     | --- collectZombieJob: --- 10, [28158]
[2025-06-03 05:18:35] 2025-06-03 03:05:15,588 | INFO     | zombie collector waiting for pid 28158
[2025-06-03 05:18:35] 2025-06-03 03:05:15,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:18:35] 2025-06-03 03:05:15,589 | INFO     | collected zombie processes
[2025-06-03 05:18:35] 2025-06-03 03:05:15,589 | INFO     | will attempt to kill all subprocesses of pid=28158
[2025-06-03 05:18:35] 2025-06-03 03:05:15,693 | INFO     | process IDs to be killed: [28158] (in reverse order)
[2025-06-03 05:18:35] 2025-06-03 03:05:16,951 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:18:35] 2025-06-03 03:05:16,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:18:35] 2025-06-03 03:05:16,955 | INFO     | did not find any defunct processes belonging to 28158
[2025-06-03 05:18:35] 2025-06-03 03:05:16,958 | INFO     | did not find any defunct processes belonging to 28158
[2025-06-03 05:18:35] 2025-06-03 03:05:16,959 | INFO     | ready for new job
[2025-06-03 05:18:35] 2025-06-03 03:05:16,959 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:18:35] 2025-06-03 03:05:16,961 | INFO     | **************************************
[2025-06-03 05:18:35] 2025-06-03 03:05:16,961 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:18:35] 2025-06-03 03:05:16,961 | INFO     | **************************************
[2025-06-03 05:18:35] 2025-06-03 03:05:16,961 | INFO     | 
[2025-06-03 05:18:35] 2025-06-03 03:05:16,962 | INFO     | pilot is running in a VM
[2025-06-03 05:18:35] 2025-06-03 03:05:16,962 | INFO     | architecture information:
[2025-06-03 05:18:35] 2025-06-03 03:05:16,963 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:18:35] 2025-06-03 03:05:17,055 | INFO     | cat /etc/os-release:
[2025-06-03 05:18:35] NAME="CentOS Linux"
[2025-06-03 05:18:35] VERSION="7 (Core)"
[2025-06-03 05:18:35] ID="centos"
[2025-06-03 05:18:35] ID_LIKE="rhel fedora"
[2025-06-03 05:18:35] VERSION_ID="7"
[2025-06-03 05:18:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:18:35] ANSI_COLOR="0;31"
[2025-06-03 05:18:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:18:35] HOME_URL="https://www.centos.org/"
[2025-06-03 05:18:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:18:35] 
[2025-06-03 05:18:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:18:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:18:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:18:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:18:35] 
[2025-06-03 05:18:35] 2025-06-03 03:05:17,056 | INFO     | **************************************
[2025-06-03 05:18:35] 2025-06-03 03:05:17,559 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-03 05:18:35] 2025-06-03 03:05:17,708 | INFO     | sufficient remaining disk space (496850960384 B)
[2025-06-03 05:18:35] 2025-06-03 03:05:17,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:18:35] 2025-06-03 03:05:17,709 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:18:35] 2025-06-03 03:05:17,709 | INFO     | update_server=False
[2025-06-03 05:18:35] 2025-06-03 03:05:17,709 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:18:35] 2025-06-03 03:05:17,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:18:35] 2025-06-03 03:05:17,711 | INFO     | aborting loop
[2025-06-03 05:18:35] 2025-06-03 03:05:17,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:18:35] 2025-06-03 03:05:18,235 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:18:35] 2025-06-03 03:05:18,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:18:35] 2025-06-03 03:05:18,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:18:35] 2025-06-03 03:05:18,433 | INFO     | all data control threads have been joined
[2025-06-03 05:18:35] 2025-06-03 03:05:18,437 | INFO     | all payload control threads have been joined
[2025-06-03 05:18:35] 2025-06-03 03:05:18,715 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:18,717 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:18,860 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:18:35] 2025-06-03 03:05:18,876 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:18,877 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:18,910 | INFO     | all job control threads have been joined
[2025-06-03 05:18:35] 2025-06-03 03:05:19,078 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:19,256 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:19,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:18:35] 2025-06-03 03:05:19,439 | INFO     | [data] control thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:19,443 | INFO     | [payload] control thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:19,580 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:19,598 | INFO     | [job] validate thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:19,672 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:19,722 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:19,782 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:19,866 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:19,916 | INFO     | [job] control thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:23,361 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:18:35] 2025-06-03 03:05:24,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300249974592)>', '<ExcThread(monitor, started 140299963705088)>']
[2025-06-03 05:18:35] 2025-06-03 03:05:25,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:18:35] 2025-06-03 03:05:25,277 | INFO     | [monitor] control thread has ended
[2025-06-03 05:18:35] 2025-06-03 03:05:29,844 | INFO     | all workflow threads have been joined
[2025-06-03 05:18:35] 2025-06-03 03:05:29,844 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:18:35] 2025-06-03 03:05:29,845 | INFO     | traces error code: 0
[2025-06-03 05:18:35] 2025-06-03 03:05:29,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:18:35] 2025-06-03 03:05:30,239 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:18:35] 2025-06-03 03:05:30,337 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:18:35] 2025-06-03 03:05:30,401 [wrapper] pilotpid: 15594
[2025-06-03 05:18:35] 2025-06-03 03:05:30,494 [wrapper] Pilot exit status: 0
[2025-06-03 05:18:35] 2025-06-03 03:05:30,905 [wrapper] pandaids: 6677391271
[2025-06-03 05:18:35] 2025-06-03 03:05:31,133 [wrapper] cleanup supervisor_pilot 25649 15595
[2025-06-03 05:18:35] 2025-06-03 03:05:31,163 [wrapper] Test setup, not cleaning
[2025-06-03 05:18:35] 2025-06-03 03:05:31,199 [wrapper] apfmon messages muted
[2025-06-03 05:18:35] 2025-06-03 03:05:31,246 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:18:35] 2025-06-03 03:05:31,286 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:18:35]  *** Error codes and diagnostics ***
[2025-06-03 05:18:35]     "exeErrorCode": 0,
[2025-06-03 05:18:35]     "exeErrorDiag": "",
[2025-06-03 05:18:35]     "pilotErrorCode": 0,
[2025-06-03 05:18:35]     "pilotErrorDiag": "",
[2025-06-03 05:18:35]  *** Listing of results directory ***
[2025-06-03 05:18:35] total 390708
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:12 queuedata.json
[2025-06-03 05:18:35] -rwx------. 1 boinc boinc     37140 Jun  2 20:13 runpilot2-wrapper.sh
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc       100 Jun  3 00:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:18:35] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 00:47 run_atlas
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc       105 Jun  3 00:47 job.xml
[2025-06-03 05:18:35] -rw-r--r--. 2 boinc boinc 214982536 Jun  3 00:47 EVNT.45006593._000282.pool.root.1
[2025-06-03 05:18:35] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:47 start_atlas.sh
[2025-06-03 05:18:35] drwxrwx--x. 2 boinc boinc        68 Jun  3 00:47 shared
[2025-06-03 05:18:35] -rw-r--r--. 2 boinc boinc    508878 Jun  3 00:47 input.tar.gz
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc      6392 Jun  3 00:47 init_data.xml
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc         0 Jun  3 00:47 boinc_lockfile
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc      2521 Jun  3 01:18 pandaJob.out
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc    988091 Jun  3 01:21 agis_schedconf.cvmfs.json
[2025-06-03 05:18:35] drwx------. 4 boinc boinc      4096 Jun  3 01:21 pilot3
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc 178177439 Jun  3 05:02 HITS.45006595._007050.pool.root.1
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc       531 Jun  3 05:02 boinc_task_state.xml
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc      1018 Jun  3 05:03 memory_monitor_summary.json
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc   1603667 Jun  3 05:03 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc    390273 Jun  3 05:03 log.45006595._007050.job.log.tgz.1
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc        95 Jun  3 05:04 pilot_heartbeat.json
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc      7687 Jun  3 05:05 heartbeat.json
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc      4417 Jun  3 05:05 pilotlog.txt
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc   1160047 Jun  3 05:05 log.45006595._007050.job.log.1
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc       357 Jun  3 05:05 output.list
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc       620 Jun  3 05:05 runtime_log
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc   1566720 Jun  3 05:05 result.tar.gz
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc       656 Jun  3 05:05 t4HNDmkqOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm47VKDmUsLArm.diag
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc      8673 Jun  3 05:05 runtime_log.err
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc      8192 Jun  3 05:18 boinc_mmap_file
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc        28 Jun  3 05:18 wrapper_checkpoint.txt
[2025-06-03 05:18:35] -rw-r--r--. 1 boinc boinc     20534 Jun  3 05:18 stderr.txt
[2025-06-03 05:18:35] HITS file was successfully produced:
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc 178177439 Jun  3 05:02 shared/HITS.pool.root.1
[2025-06-03 05:18:35]  *** Contents of shared directory: ***
[2025-06-03 05:18:35] total 385996
[2025-06-03 05:18:35] -rw-r--r--. 2 boinc boinc 214982536 Jun  3 00:47 ATLAS.root_0
[2025-06-03 05:18:35] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:47 start_atlas.sh
[2025-06-03 05:18:35] -rw-r--r--. 2 boinc boinc    508878 Jun  3 00:47 input.tar.gz
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc 178177439 Jun  3 05:02 HITS.pool.root.1
[2025-06-03 05:18:35] -rw-------. 1 boinc boinc   1566720 Jun  3 05:05 result.tar.gz
05:18:37 (25436): run_atlas exited; CPU time 49168.837639
05:18:37 (25436): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN