Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:35:34 (6615): wrapper (7.7.26015): starting
03:35:34 (6615): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:35:34] Arguments: --nthreads 8
[2025-06-03 03:35:34] Threads: 8
[2025-06-03 03:35:34] Checking for CVMFS
[2025-06-03 03:35:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:35:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:35:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:35:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:35:38] 2.11.2.0 3171 31103 89996 146723 2 154 22655574 25165824 4353 130560 0 15572127 99.843 16929254 2093 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 03:35:38] CVMFS is ok
[2025-06-03 03:35:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:35:38] Checking for apptainer binary...
[2025-06-03 03:35:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:35:38] Running /usr/bin/apptainer --version
[2025-06-03 03:35:38] apptainer version 1.3.2-1.el7
[2025-06-03 03:35:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:35:49] cg-vwn326.simple-grid.lan
[2025-06-03 03:35:49] apptainer works
[2025-06-03 03:35:49] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:35:49] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:35:49] Starting ATLAS job with PandaID=6677391103
[2025-06-03 03:35:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/30 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:47:00]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:47:00] 2025-06-03 05:24:17,708 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 07:47:00] 2025-06-03 05:24:17,708 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 07:47:00] 2025-06-03 05:24:17,712 | INFO     | fitting pss+swap vs Time
[2025-06-03 07:47:00] 2025-06-03 05:24:17,713 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 07:47:00] 2025-06-03 05:24:17,715 | INFO     | sum of deviations: -18066294360.0
[2025-06-03 07:47:00] 2025-06-03 05:24:17,715 | INFO     | mean x: 1748921394.0
[2025-06-03 07:47:00] 2025-06-03 05:24:17,715 | INFO     | mean y: 2496413.538116592
[2025-06-03 07:47:00] 2025-06-03 05:24:17,715 | INFO     | -- intersect: 9191217995.622473
[2025-06-03 07:47:00] 2025-06-03 05:24:17,715 | INFO     | intersect: 9191217995.622473
[2025-06-03 07:47:00] 2025-06-03 05:24:17,715 | INFO     | chi2: 2.5644421693315063
[2025-06-03 07:47:00] 2025-06-03 05:24:17,716 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 07:47:00] 2025-06-03 05:24:17,718 | INFO     | sum of deviations: -2939151318.5000105
[2025-06-03 07:47:00] 2025-06-03 05:24:17,718 | INFO     | mean x: 1748921241.5
[2025-06-03 07:47:00] 2025-06-03 05:24:17,718 | INFO     | mean y: 2506434.4541284405
[2025-06-03 07:47:00] 2025-06-03 05:24:17,718 | INFO     | -- intersect: 1602629671.0894861
[2025-06-03 07:47:00] 2025-06-03 05:24:17,718 | INFO     | intersect: 1602629671.0894861
[2025-06-03 07:47:00] 2025-06-03 05:24:17,718 | INFO     | chi2: 1.8001783699603462
[2025-06-03 07:47:00] 2025-06-03 05:24:17,718 | INFO     | current chi2=1.8001783699603462 (change=29.802340973451813 %)
[2025-06-03 07:47:00] 2025-06-03 05:24:17,719 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 07:47:00] 2025-06-03 05:24:17,720 | INFO     | sum of deviations: -2708683771.9999957
[2025-06-03 07:47:00] 2025-06-03 05:24:17,720 | INFO     | mean x: 1748921089.0
[2025-06-03 07:47:00] 2025-06-03 05:24:17,721 | INFO     | mean y: 2506597.192488263
[2025-06-03 07:47:00] 2025-06-03 05:24:17,721 | INFO     | -- intersect: 1583466512.8840914
[2025-06-03 07:47:00] 2025-06-03 05:24:17,721 | INFO     | intersect: 1583466512.8840914
[2025-06-03 07:47:00] 2025-06-03 05:24:17,721 | INFO     | chi2: 1.8002418728144467
[2025-06-03 07:47:00] 2025-06-03 05:24:17,721 | INFO     | current chi2=1.8002418728144467 (change=-0.0035275867747430177 %)
[2025-06-03 07:47:00] 2025-06-03 05:24:17,721 | INFO     | right removable region: 212
[2025-06-03 07:47:00] 2025-06-03 05:24:17,722 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 07:47:00] 2025-06-03 05:24:17,723 | INFO     | sum of deviations: -56241908469.50001
[2025-06-03 07:47:00] 2025-06-03 05:24:17,724 | INFO     | mean x: 1748921546.5
[2025-06-03 07:47:00] 2025-06-03 05:24:17,724 | INFO     | mean y: 2521940.142201835
[2025-06-03 07:47:00] 2025-06-03 05:24:17,724 | INFO     | -- intersect: 30621564839.5852
[2025-06-03 07:47:00] 2025-06-03 05:24:17,724 | INFO     | intersect: 30621564839.5852
[2025-06-03 07:47:00] 2025-06-03 05:24:17,724 | INFO     | chi2: 0.9719430781494871
[2025-06-03 07:47:00] 2025-06-03 05:24:17,724 | INFO     | current chi2=0.9719430781494871 (change=62.09923975775007 %)
[2025-06-03 07:47:00] 2025-06-03 05:24:17,725 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 07:47:00] 2025-06-03 05:24:17,726 | INFO     | sum of deviations: -52529132215.0
[2025-06-03 07:47:00] 2025-06-03 05:24:17,726 | INFO     | mean x: 1748921699.0
[2025-06-03 07:47:00] 2025-06-03 05:24:17,726 | INFO     | mean y: 2519289.7417840376
[2025-06-03 07:47:00] 2025-06-03 05:24:17,727 | INFO     | -- intersect: 30661868403.108124
[2025-06-03 07:47:00] 2025-06-03 05:24:17,727 | INFO     | intersect: 30661868403.108124
[2025-06-03 07:47:00] 2025-06-03 05:24:17,727 | INFO     | chi2: 0.9626067472154933
[2025-06-03 07:47:00] 2025-06-03 05:24:17,727 | INFO     | current chi2=0.9626067472154933 (change=0.960584127186698 %)
[2025-06-03 07:47:00] 2025-06-03 05:24:17,727 | INFO     | left removable region: 20
[2025-06-03 07:47:00] 2025-06-03 05:24:17,727 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 07:47:00] 2025-06-03 05:24:17,729 | INFO     | sum of deviations: -23016339317.999992
[2025-06-03 07:47:00] 2025-06-03 05:24:17,729 | INFO     | mean x: 1748921668.5
[2025-06-03 07:47:00] 2025-06-03 05:24:17,729 | INFO     | mean y: 2520137.5104166665
[2025-06-03 07:47:00] 2025-06-03 05:24:17,729 | INFO     | -- intersect: 18344080571.193024
[2025-06-03 07:47:00] 2025-06-03 05:24:17,729 | INFO     | intersect: 18344080571.193024
[2025-06-03 07:47:00] 2025-06-03 05:24:17,730 | INFO     | chi2: 0.1406909352593708
[2025-06-03 07:47:00] 2025-06-03 05:24:17,730 | INFO     | -- intersect: 18344080571.193024
[2025-06-03 07:47:00] 2025-06-03 05:24:17,730 | INFO     | current memory leak: -10.49 B/s (using 192 data points, chi2=0.14)
[2025-06-03 07:47:00] 2025-06-03 05:24:17,731 | INFO     | ..............................
[2025-06-03 07:47:00] 2025-06-03 05:24:17,731 | INFO     | . Timing measurements:
[2025-06-03 07:47:00] 2025-06-03 05:24:17,731 | INFO     | . get job = 0 s
[2025-06-03 07:47:00] 2025-06-03 05:24:17,731 | INFO     | . initial setup = 3 s
[2025-06-03 07:47:00] 2025-06-03 05:24:17,731 | INFO     | . payload setup = 13 s
[2025-06-03 07:47:00] 2025-06-03 05:24:17,731 | INFO     | . stage-in = 0 s
[2025-06-03 07:47:00] 2025-06-03 05:24:17,731 | INFO     | . payload execution = 13566 s
[2025-06-03 07:47:00] 2025-06-03 05:24:17,731 | INFO     | . stage-out = 3 s
[2025-06-03 07:47:00] 2025-06-03 05:24:17,731 | INFO     | . log creation = 1 s
[2025-06-03 07:47:00] 2025-06-03 05:24:17,731 | INFO     | ..............................
[2025-06-03 07:47:00] 2025-06-03 05:24:18,356 | INFO     | 
[2025-06-03 07:47:00] 2025-06-03 05:24:18,357 | INFO     | job summary report
[2025-06-03 07:47:00] 2025-06-03 05:24:18,357 | INFO     | --------------------------------------------------
[2025-06-03 07:47:00] 2025-06-03 05:24:18,357 | INFO     | PanDA job id: 6677391103
[2025-06-03 07:47:00] 2025-06-03 05:24:18,357 | INFO     | task id: 45006595
[2025-06-03 07:47:00] 2025-06-03 05:24:18,357 | INFO     | errors: (none)
[2025-06-03 07:47:00] 2025-06-03 05:24:18,357 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:47:00] 2025-06-03 05:24:18,357 | INFO     | pilot state: finished 
[2025-06-03 07:47:00] 2025-06-03 05:24:18,358 | INFO     | transexitcode: 0
[2025-06-03 07:47:00] 2025-06-03 05:24:18,358 | INFO     | exeerrorcode: 0
[2025-06-03 07:47:00] 2025-06-03 05:24:18,358 | INFO     | exeerrordiag: 
[2025-06-03 07:47:00] 2025-06-03 05:24:18,358 | INFO     | exitcode: 0
[2025-06-03 07:47:00] 2025-06-03 05:24:18,358 | INFO     | exitmsg: OK
[2025-06-03 07:47:00] 2025-06-03 05:24:18,358 | INFO     | cpuconsumptiontime: 50493 s
[2025-06-03 07:47:00] 2025-06-03 05:24:18,358 | INFO     | nevents: 400
[2025-06-03 07:47:00] 2025-06-03 05:24:18,358 | INFO     | neventsw: 0
[2025-06-03 07:47:00] 2025-06-03 05:24:18,358 | INFO     | pid: 19179
[2025-06-03 07:47:00] 2025-06-03 05:24:18,358 | INFO     | pgrp: 19179
[2025-06-03 07:47:00] 2025-06-03 05:24:18,359 | INFO     | corecount: 8
[2025-06-03 07:47:00] 2025-06-03 05:24:18,359 | INFO     | event service: False
[2025-06-03 07:47:00] 2025-06-03 05:24:18,359 | INFO     | sizes: {0: 2405178, 1: 2405178, 10: 2405412, 12: 2405440, 13584: 2435057, 13588: 2444000, 13591: 2444184, 13669: 2444354}
[2025-06-03 07:47:00] 2025-06-03 05:24:18,359 | INFO     | --------------------------------------------------
[2025-06-03 07:47:00] 2025-06-03 05:24:18,359 | INFO     | 
[2025-06-03 07:47:00] 2025-06-03 05:24:18,359 | INFO     | executing command: ls -lF /var/lib/boinc/slots/30
[2025-06-03 07:47:00] 2025-06-03 05:24:18,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,416 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:47:00] 2025-06-03 05:24:18,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,416 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:47:00] 2025-06-03 05:24:18,416 | INFO     | job 6677391103 has completed (purged errors)
[2025-06-03 07:47:00] 2025-06-03 05:24:18,416 | INFO     | overall cleanup function is called
[2025-06-03 07:47:00] 2025-06-03 05:24:18,990 | INFO     | PID=10623 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 07:47:00] 2025-06-03 05:24:18,990 | INFO     | .. there are 9 such processes running
[2025-06-03 07:47:00] 2025-06-03 05:24:19,425 | INFO     | --- collectZombieJob: --- 10, [19179]
[2025-06-03 07:47:00] 2025-06-03 05:24:19,426 | INFO     | zombie collector waiting for pid 19179
[2025-06-03 07:47:00] 2025-06-03 05:24:19,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:47:00] 2025-06-03 05:24:19,426 | INFO     | collected zombie processes
[2025-06-03 07:47:00] 2025-06-03 05:24:19,426 | INFO     | will attempt to kill all subprocesses of pid=19179
[2025-06-03 07:47:00] 2025-06-03 05:24:19,527 | INFO     | process IDs to be killed: [19179] (in reverse order)
[2025-06-03 07:47:00] 2025-06-03 05:24:20,408 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:47:00] 2025-06-03 05:24:20,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:47:00] 2025-06-03 05:24:20,412 | INFO     | did not find any defunct processes belonging to 19179
[2025-06-03 07:47:00] 2025-06-03 05:24:20,414 | INFO     | did not find any defunct processes belonging to 19179
[2025-06-03 07:47:00] 2025-06-03 05:24:20,415 | INFO     | ready for new job
[2025-06-03 07:47:00] 2025-06-03 05:24:20,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:47:00] 2025-06-03 05:24:20,417 | INFO     | **************************************
[2025-06-03 07:47:00] 2025-06-03 05:24:20,417 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:47:00] 2025-06-03 05:24:20,417 | INFO     | **************************************
[2025-06-03 07:47:00] 2025-06-03 05:24:20,417 | INFO     | 
[2025-06-03 07:47:00] 2025-06-03 05:24:20,418 | INFO     | pilot is running in a VM
[2025-06-03 07:47:00] 2025-06-03 05:24:20,418 | INFO     | architecture information:
[2025-06-03 07:47:00] 2025-06-03 05:24:20,428 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:47:00] 2025-06-03 05:24:20,557 | INFO     | cat /etc/os-release:
[2025-06-03 07:47:00] NAME="CentOS Linux"
[2025-06-03 07:47:00] VERSION="7 (Core)"
[2025-06-03 07:47:00] ID="centos"
[2025-06-03 07:47:00] ID_LIKE="rhel fedora"
[2025-06-03 07:47:00] VERSION_ID="7"
[2025-06-03 07:47:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:47:00] ANSI_COLOR="0;31"
[2025-06-03 07:47:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:47:00] HOME_URL="https://www.centos.org/"
[2025-06-03 07:47:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:47:00] 
[2025-06-03 07:47:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:47:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:47:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:47:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:47:00] 
[2025-06-03 07:47:00] 2025-06-03 05:24:20,558 | INFO     | **************************************
[2025-06-03 07:47:00] 2025-06-03 05:24:21,061 | INFO     | executing command: df -mP /var/lib/boinc/slots/30
[2025-06-03 07:47:00] 2025-06-03 05:24:21,393 | INFO     | sufficient remaining disk space (496920166400 B)
[2025-06-03 07:47:00] 2025-06-03 05:24:21,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:47:00] 2025-06-03 05:24:21,394 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:47:00] 2025-06-03 05:24:21,394 | INFO     | update_server=False
[2025-06-03 07:47:00] 2025-06-03 05:24:21,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:47:00] 2025-06-03 05:24:21,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:47:00] 2025-06-03 05:24:21,394 | INFO     | aborting loop
[2025-06-03 07:47:00] 2025-06-03 05:24:21,403 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 07:47:00] 2025-06-03 05:24:21,403 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:47:00] 2025-06-03 05:24:21,403 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:47:00] 2025-06-03 05:24:21,403 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:47:00] 2025-06-03 05:24:21,974 | INFO     | all job control threads have been joined
[2025-06-03 07:47:00] 2025-06-03 05:24:22,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:47:00] 2025-06-03 05:24:22,275 | INFO     | all data control threads have been joined
[2025-06-03 07:47:00] 2025-06-03 05:24:22,383 | INFO     | all payload control threads have been joined
[2025-06-03 07:47:00] 2025-06-03 05:24:22,399 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:22,401 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:22,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:47:00] 2025-06-03 05:24:22,895 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:47:00] 2025-06-03 05:24:22,981 | INFO     | [job] control thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:23,097 | INFO     | [job] validate thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:23,127 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:23,282 | INFO     | [data] control thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:23,391 | INFO     | [payload] control thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:23,410 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:23,581 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:23,730 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:23,872 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:23,898 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:23,902 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:24,588 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:26,106 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:31,733 | INFO     | job.realtimelogging is not enabled
[2025-06-03 07:47:00] 2025-06-03 05:24:32,740 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:47:00] 2025-06-03 05:24:33,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152668878656)>', '<ExcThread(monitor, started 140152441980672)>']
[2025-06-03 07:47:00] 2025-06-03 05:24:33,475 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:47:00] 2025-06-03 05:24:33,476 | INFO     | [monitor] control thread has ended
[2025-06-03 07:47:00] 2025-06-03 05:24:38,201 | INFO     | all workflow threads have been joined
[2025-06-03 07:47:00] 2025-06-03 05:24:38,202 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:47:00] 2025-06-03 05:24:38,202 | INFO     | traces error code: 0
[2025-06-03 07:47:00] 2025-06-03 05:24:38,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:47:00] 2025-06-03 05:24:38,537 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:47:00] 2025-06-03 05:24:38,563 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:47:00] 2025-06-03 05:24:38,587 [wrapper] pilotpid: 10623
[2025-06-03 07:47:00] 2025-06-03 05:24:38,702 [wrapper] Pilot exit status: 0
[2025-06-03 07:47:00] 2025-06-03 05:24:39,206 [wrapper] pandaids: 6677391103
[2025-06-03 07:47:00] 2025-06-03 05:24:39,769 [wrapper] cleanup supervisor_pilot  6281 10624
[2025-06-03 07:47:00] 2025-06-03 05:24:39,815 [wrapper] Test setup, not cleaning
[2025-06-03 07:47:00] 2025-06-03 05:24:39,855 [wrapper] apfmon messages muted
[2025-06-03 07:47:00] 2025-06-03 05:24:39,928 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:47:00] 2025-06-03 05:24:40,064 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:47:00]  *** Error codes and diagnostics ***
[2025-06-03 07:47:00]     "exeErrorCode": 0,
[2025-06-03 07:47:00]     "exeErrorDiag": "",
[2025-06-03 07:47:00]     "pilotErrorCode": 0,
[2025-06-03 07:47:00]     "pilotErrorDiag": "",
[2025-06-03 07:47:00]  *** Listing of results directory ***
[2025-06-03 07:47:00] total 396608
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:12 queuedata.json
[2025-06-03 07:47:00] -rwx------. 1 boinc boinc     37140 Jun  2 20:14 runpilot2-wrapper.sh
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc       100 Jun  3 03:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:47:00] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 03:35 run_atlas
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc       105 Jun  3 03:35 job.xml
[2025-06-03 07:47:00] -rw-r--r--. 2 boinc boinc 214700244 Jun  3 03:35 EVNT.45006593._000276.pool.root.1
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc      6392 Jun  3 03:35 init_data.xml
[2025-06-03 07:47:00] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:35 start_atlas.sh
[2025-06-03 07:47:00] drwxrwx--x. 2 boinc boinc        68 Jun  3 03:35 shared
[2025-06-03 07:47:00] -rw-r--r--. 2 boinc boinc    508876 Jun  3 03:35 input.tar.gz
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc         0 Jun  3 03:35 boinc_lockfile
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc      2521 Jun  3 03:35 pandaJob.out
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc    988081 Jun  3 03:36 agis_schedconf.cvmfs.json
[2025-06-03 07:47:00] drwx------. 4 boinc boinc      4096 Jun  3 03:36 pilot3
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc 184481203 Jun  3 07:21 HITS.45006595._006882.pool.root.1
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc       531 Jun  3 07:22 boinc_task_state.xml
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc      1019 Jun  3 07:22 memory_monitor_summary.json
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc   1603667 Jun  3 07:22 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc    372628 Jun  3 07:22 log.45006595._006882.job.log.tgz.1
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc        95 Jun  3 07:23 pilot_heartbeat.json
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc      7681 Jun  3 07:24 heartbeat.json
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc      4612 Jun  3 07:24 pilotlog.txt
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc   1188067 Jun  3 07:24 log.45006595._006882.job.log.1
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc       357 Jun  3 07:24 output.list
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc       620 Jun  3 07:24 runtime_log
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc   1576960 Jun  3 07:24 result.tar.gz
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc      8673 Jun  3 07:24 runtime_log.err
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc       656 Jun  3 07:24 LsBODmvqOg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWwfKDmQ1dGmn.diag
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc      8192 Jun  3 07:47 boinc_mmap_file
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc        28 Jun  3 07:47 wrapper_checkpoint.txt
[2025-06-03 07:47:00] -rw-r--r--. 1 boinc boinc     20587 Jun  3 07:47 stderr.txt
[2025-06-03 07:47:00] HITS file was successfully produced:
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc 184481203 Jun  3 07:21 shared/HITS.pool.root.1
[2025-06-03 07:47:00]  *** Contents of shared directory: ***
[2025-06-03 07:47:00] total 391888
[2025-06-03 07:47:00] -rw-r--r--. 2 boinc boinc 214700244 Jun  3 03:35 ATLAS.root_0
[2025-06-03 07:47:00] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:35 start_atlas.sh
[2025-06-03 07:47:00] -rw-r--r--. 2 boinc boinc    508876 Jun  3 03:35 input.tar.gz
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc 184481203 Jun  3 07:21 HITS.pool.root.1
[2025-06-03 07:47:00] -rw-------. 1 boinc boinc   1576960 Jun  3 07:24 result.tar.gz
07:47:02 (6615): run_atlas exited; CPU time 50657.025872
07:47:02 (6615): called boinc_finish(0)

</stderr_txt>
]]>

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