Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:40:15 (27510): wrapper (7.7.26015): starting
22:40:15 (27510): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 22:40:15] Arguments: --nthreads 8
[2025-06-02 22:40:15] Threads: 8
[2025-06-02 22:40:15] Checking for CVMFS
[2025-06-02 22:40:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 22:40:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 22:40:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 22:40:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 22:40:18] 2.11.2.0 27863 31001 95784 146718 3 16 17157893 25165824 4633 130560 0 14784826 99.757 18161175 4918 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 22:40:18] CVMFS is ok
[2025-06-02 22:40:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 22:40:18] Checking for apptainer binary...
[2025-06-02 22:40:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 22:40:18] Running /usr/bin/apptainer --version
[2025-06-02 22:40:18] apptainer version 1.3.2-1.el7
[2025-06-02 22:40:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 22:40:32] cg-vwn495.simple-grid.lan
[2025-06-02 22:40:32] apptainer works
[2025-06-02 22:40:32] Set ATHENA_PROC_NUMBER=8
[2025-06-02 22:40:32] Set ATHENA_CORE_NUMBER=8
[2025-06-02 22:40:32] Starting ATLAS job with PandaID=6677391278
[2025-06-02 22:40:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 02:48:44]  *** The last 200 lines of the pilot log: ***
[2025-06-03 02:48:44] 2025-06-03 00:10:23,773 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 02:48:44] 2025-06-03 00:10:23,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 02:48:44] 2025-06-03 00:10:23,774 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 02:48:44] 2025-06-03 00:10:23,774 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 02:48:44] 2025-06-03 00:10:23,778 | INFO     | fitting pss+swap vs Time
[2025-06-03 02:48:44] 2025-06-03 00:10:23,779 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 02:48:44] 2025-06-03 00:10:23,780 | INFO     | sum of deviations: 22874116506.50001
[2025-06-03 02:48:44] 2025-06-03 00:10:23,780 | INFO     | mean x: 1748903416.5
[2025-06-03 02:48:44] 2025-06-03 00:10:23,781 | INFO     | mean y: 2532162.4278350514
[2025-06-03 02:48:44] 2025-06-03 00:10:23,781 | INFO     | -- intersect: -17667530136.058945
[2025-06-03 02:48:44] 2025-06-03 00:10:23,781 | INFO     | intersect: -17667530136.058945
[2025-06-03 02:48:44] 2025-06-03 00:10:23,781 | INFO     | chi2: 7.416489941529666
[2025-06-03 02:48:44] 2025-06-03 00:10:23,781 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 02:48:44] 2025-06-03 00:10:23,804 | INFO     | sum of deviations: 37397572072.00001
[2025-06-03 02:48:44] 2025-06-03 00:10:23,804 | INFO     | mean x: 1748903264.0
[2025-06-03 02:48:44] 2025-06-03 00:10:23,804 | INFO     | mean y: 2544909.5396825396
[2025-06-03 02:48:44] 2025-06-03 00:10:23,804 | INFO     | -- intersect: -31240799605.376358
[2025-06-03 02:48:44] 2025-06-03 00:10:23,805 | INFO     | intersect: -31240799605.376358
[2025-06-03 02:48:44] 2025-06-03 00:10:23,805 | INFO     | chi2: 6.714274920294815
[2025-06-03 02:48:44] 2025-06-03 00:10:23,805 | INFO     | current chi2=6.714274920294815 (change=9.468293313561992 %)
[2025-06-03 02:48:44] 2025-06-03 00:10:23,805 | INFO     | right removable region: 188
[2025-06-03 02:48:44] 2025-06-03 00:10:23,805 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 02:48:44] 2025-06-03 00:10:23,807 | INFO     | sum of deviations: -46530912484.0
[2025-06-03 02:48:44] 2025-06-03 00:10:23,807 | INFO     | mean x: 1748903569.0
[2025-06-03 02:48:44] 2025-06-03 00:10:23,807 | INFO     | mean y: 2594145.9206349207
[2025-06-03 02:48:44] 2025-06-03 00:10:23,807 | INFO     | -- intersect: 38876283059.851234
[2025-06-03 02:48:44] 2025-06-03 00:10:23,807 | INFO     | intersect: 38876283059.851234
[2025-06-03 02:48:44] 2025-06-03 00:10:23,807 | INFO     | chi2: 2.4391814045589055
[2025-06-03 02:48:44] 2025-06-03 00:10:23,807 | INFO     | current chi2=2.4391814045589055 (change=67.11137716373928 %)
[2025-06-03 02:48:44] 2025-06-03 00:10:23,808 | INFO     | sum of square deviations: 1931608310.0
[2025-06-03 02:48:44] 2025-06-03 00:10:23,809 | INFO     | sum of deviations: -80106722773.5
[2025-06-03 02:48:44] 2025-06-03 00:10:23,809 | INFO     | mean x: 1748903721.5
[2025-06-03 02:48:44] 2025-06-03 00:10:23,809 | INFO     | mean y: 2625556.929347826
[2025-06-03 02:48:44] 2025-06-03 00:10:23,809 | INFO     | -- intersect: 72532312269.52325
[2025-06-03 02:48:44] 2025-06-03 00:10:23,809 | INFO     | intersect: 72532312269.52325
[2025-06-03 02:48:44] 2025-06-03 00:10:23,810 | INFO     | chi2: 0.9777237367606637
[2025-06-03 02:48:44] 2025-06-03 00:10:23,810 | INFO     | current chi2=0.9777237367606637 (change=59.91590724112328 %)
[2025-06-03 02:48:44] 2025-06-03 00:10:23,810 | INFO     | sum of square deviations: 1778377530.0
[2025-06-03 02:48:44] 2025-06-03 00:10:23,811 | INFO     | sum of deviations: -79954897280.99998
[2025-06-03 02:48:44] 2025-06-03 00:10:23,811 | INFO     | mean x: 1748903874.0
[2025-06-03 02:48:44] 2025-06-03 00:10:23,811 | INFO     | mean y: 2625361.4804469272
[2025-06-03 02:48:44] 2025-06-03 00:10:23,811 | INFO     | -- intersect: 78632402920.58678
[2025-06-03 02:48:44] 2025-06-03 00:10:23,812 | INFO     | intersect: 78632402920.58678
[2025-06-03 02:48:44] 2025-06-03 00:10:23,812 | INFO     | chi2: 0.9412841373434082
[2025-06-03 02:48:44] 2025-06-03 00:10:23,812 | INFO     | current chi2=0.9412841373434082 (change=3.7269832005904875 %)
[2025-06-03 02:48:44] 2025-06-03 00:10:23,812 | INFO     | left removable region: 30
[2025-06-03 02:48:44] 2025-06-03 00:10:23,812 | INFO     | sum of square deviations: 1223016419.5
[2025-06-03 02:48:44] 2025-06-03 00:10:23,813 | INFO     | sum of deviations: -54565309317.500015
[2025-06-03 02:48:44] 2025-06-03 00:10:23,813 | INFO     | mean x: 1748904148.5
[2025-06-03 02:48:44] 2025-06-03 00:10:23,813 | INFO     | mean y: 2632337.006329114
[2025-06-03 02:48:44] 2025-06-03 00:10:23,814 | INFO     | -- intersect: 78030608337.99532
[2025-06-03 02:48:44] 2025-06-03 00:10:23,814 | INFO     | intersect: 78030608337.99532
[2025-06-03 02:48:44] 2025-06-03 00:10:23,814 | INFO     | chi2: 0.1327069081280433
[2025-06-03 02:48:44] 2025-06-03 00:10:23,814 | INFO     | -- intersect: 78030608337.99532
[2025-06-03 02:48:44] 2025-06-03 00:10:23,814 | INFO     | current memory leak: -44.62 B/s (using 158 data points, chi2=0.13)
[2025-06-03 02:48:44] 2025-06-03 00:10:23,815 | INFO     | ..............................
[2025-06-03 02:48:44] 2025-06-03 00:10:23,815 | INFO     | . Timing measurements:
[2025-06-03 02:48:44] 2025-06-03 00:10:23,815 | INFO     | . get job = 0 s
[2025-06-03 02:48:44] 2025-06-03 00:10:23,816 | INFO     | . initial setup = 9 s
[2025-06-03 02:48:44] 2025-06-03 00:10:23,816 | INFO     | . payload setup = 163 s
[2025-06-03 02:48:44] 2025-06-03 00:10:23,816 | INFO     | . stage-in = 0 s
[2025-06-03 02:48:44] 2025-06-03 00:10:23,816 | INFO     | . payload execution = 11944 s
[2025-06-03 02:48:44] 2025-06-03 00:10:23,816 | INFO     | . stage-out = 3 s
[2025-06-03 02:48:44] 2025-06-03 00:10:23,816 | INFO     | . log creation = 1 s
[2025-06-03 02:48:44] 2025-06-03 00:10:23,816 | INFO     | ..............................
[2025-06-03 02:48:44] 2025-06-03 00:10:24,361 | INFO     | 
[2025-06-03 02:48:44] 2025-06-03 00:10:24,362 | INFO     | job summary report
[2025-06-03 02:48:44] 2025-06-03 00:10:24,362 | INFO     | --------------------------------------------------
[2025-06-03 02:48:44] 2025-06-03 00:10:24,362 | INFO     | PanDA job id: 6677391278
[2025-06-03 02:48:44] 2025-06-03 00:10:24,362 | INFO     | task id: 45006595
[2025-06-03 02:48:44] 2025-06-03 00:10:24,362 | INFO     | errors: (none)
[2025-06-03 02:48:44] 2025-06-03 00:10:24,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 02:48:44] 2025-06-03 00:10:24,362 | INFO     | pilot state: finished 
[2025-06-03 02:48:44] 2025-06-03 00:10:24,362 | INFO     | transexitcode: 0
[2025-06-03 02:48:44] 2025-06-03 00:10:24,362 | INFO     | exeerrorcode: 0
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | exeerrordiag: 
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | exitcode: 0
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | exitmsg: OK
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | cpuconsumptiontime: 43824 s
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | nevents: 400
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | neventsw: 0
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | pid: 12167
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | pgrp: 12167
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | corecount: 8
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | event service: False
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | sizes: {0: 2404349, 1: 2404951, 2: 2405234, 3: 2405234, 13: 2405262, 24: 2405318, 35: 2405474, 45: 2405502, 56: 2405530, 67: 2405558, 78: 2405586, 88: 2405922, 98:
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | --------------------------------------------------
[2025-06-03 02:48:44] 2025-06-03 00:10:24,363 | INFO     | 
[2025-06-03 02:48:44] 2025-06-03 00:10:24,364 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 02:48:44] 2025-06-03 00:10:24,688 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,688 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,688 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,688 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,688 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,689 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,689 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,689 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,689 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,689 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,689 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,689 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,689 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,689 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,689 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,689 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,689 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,690 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 02:48:44] 2025-06-03 00:10:24,690 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,690 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 02:48:44] 2025-06-03 00:10:24,690 | INFO     | job 6677391278 has completed (purged errors)
[2025-06-03 02:48:44] 2025-06-03 00:10:24,690 | INFO     | overall cleanup function is called
[2025-06-03 02:48:44] 2025-06-03 00:10:25,698 | INFO     | --- collectZombieJob: --- 10, [12167]
[2025-06-03 02:48:44] 2025-06-03 00:10:25,699 | INFO     | zombie collector waiting for pid 12167
[2025-06-03 02:48:44] 2025-06-03 00:10:25,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 02:48:44] 2025-06-03 00:10:25,699 | INFO     | collected zombie processes
[2025-06-03 02:48:44] 2025-06-03 00:10:25,699 | INFO     | will attempt to kill all subprocesses of pid=12167
[2025-06-03 02:48:44] 2025-06-03 00:10:25,823 | INFO     | process IDs to be killed: [12167] (in reverse order)
[2025-06-03 02:48:44] 2025-06-03 00:10:26,712 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 02:48:44] 2025-06-03 00:10:26,712 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 02:48:44] 2025-06-03 00:10:26,715 | INFO     | did not find any defunct processes belonging to 12167
[2025-06-03 02:48:44] 2025-06-03 00:10:26,718 | INFO     | did not find any defunct processes belonging to 12167
[2025-06-03 02:48:44] 2025-06-03 00:10:26,718 | INFO     | ready for new job
[2025-06-03 02:48:44] 2025-06-03 00:10:26,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 02:48:44] 2025-06-03 00:10:26,720 | INFO     | **************************************
[2025-06-03 02:48:44] 2025-06-03 00:10:26,720 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 02:48:44] 2025-06-03 00:10:26,720 | INFO     | **************************************
[2025-06-03 02:48:44] 2025-06-03 00:10:26,720 | INFO     | 
[2025-06-03 02:48:44] 2025-06-03 00:10:26,721 | INFO     | pilot is running in a VM
[2025-06-03 02:48:44] 2025-06-03 00:10:26,721 | INFO     | architecture information:
[2025-06-03 02:48:44] 2025-06-03 00:10:26,738 | INFO     | executing command: cat /etc/os-release
[2025-06-03 02:48:44] 2025-06-03 00:10:27,060 | INFO     | cat /etc/os-release:
[2025-06-03 02:48:44] NAME="CentOS Linux"
[2025-06-03 02:48:44] VERSION="7 (Core)"
[2025-06-03 02:48:44] ID="centos"
[2025-06-03 02:48:44] ID_LIKE="rhel fedora"
[2025-06-03 02:48:44] VERSION_ID="7"
[2025-06-03 02:48:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 02:48:44] ANSI_COLOR="0;31"
[2025-06-03 02:48:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 02:48:44] HOME_URL="https://www.centos.org/"
[2025-06-03 02:48:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 02:48:44] 
[2025-06-03 02:48:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 02:48:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 02:48:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 02:48:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 02:48:44] 
[2025-06-03 02:48:44] 2025-06-03 00:10:27,060 | INFO     | **************************************
[2025-06-03 02:48:44] 2025-06-03 00:10:27,564 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 02:48:44] 2025-06-03 00:10:27,799 | INFO     | sufficient remaining disk space (497038655488 B)
[2025-06-03 02:48:44] 2025-06-03 00:10:27,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 02:48:44] 2025-06-03 00:10:27,800 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 02:48:44] 2025-06-03 00:10:27,800 | INFO     | update_server=False
[2025-06-03 02:48:44] 2025-06-03 00:10:27,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 02:48:44] 2025-06-03 00:10:27,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 02:48:44] 2025-06-03 00:10:28,159 | INFO     | all payload control threads have been joined
[2025-06-03 02:48:44] 2025-06-03 00:10:28,262 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 02:48:44] 2025-06-03 00:10:28,263 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 02:48:44] 2025-06-03 00:10:28,263 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:48:44] 2025-06-03 00:10:28,263 | INFO     | will abort loop
[2025-06-03 02:48:44] 2025-06-03 00:10:28,552 | INFO     | all job control threads have been joined
[2025-06-03 02:48:44] 2025-06-03 00:10:28,556 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 02:48:44] 2025-06-03 00:10:28,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 02:48:44] 2025-06-03 00:10:28,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 02:48:44] 2025-06-03 00:10:28,806 | INFO     | [job] retrieve thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:28,891 | INFO     | all data control threads have been joined
[2025-06-03 02:48:44] 2025-06-03 00:10:28,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:48:44] 2025-06-03 00:10:28,985 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:29,035 | INFO     | [job] validate thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:29,120 | INFO     | [payload] validate_post thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:29,166 | INFO     | [payload] control thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:29,269 | INFO     | [job] job monitor thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:29,559 | INFO     | [job] control thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:29,577 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:29,810 | INFO     | [data] copytool_out thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:29,862 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:29,897 | INFO     | [data] copytool_in thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:29,898 | INFO     | [data] control thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:29,957 | INFO     | [job] queue monitor thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:29,980 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:30,232 | INFO     | [payload] failed_post thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:30,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 02:48:44] 2025-06-03 00:10:34,875 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 02:48:44] 2025-06-03 00:10:35,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336960595776)>', '<ExcThread(monitor, started 140336294778624)>']
[2025-06-03 02:48:44] 2025-06-03 00:10:36,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 02:48:44] 2025-06-03 00:10:36,603 | INFO     | [monitor] control thread has ended
[2025-06-03 02:48:44] 2025-06-03 00:10:40,828 | INFO     | all workflow threads have been joined
[2025-06-03 02:48:44] 2025-06-03 00:10:40,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 02:48:44] 2025-06-03 00:10:40,829 | INFO     | traces error code: 0
[2025-06-03 02:48:44] 2025-06-03 00:10:40,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 02:48:44] 2025-06-03 00:10:41,180 [wrapper] ==== pilot stdout END ====
[2025-06-03 02:48:44] 2025-06-03 00:10:41,281 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 02:48:44] 2025-06-03 00:10:41,397 [wrapper] pilotpid: 1547
[2025-06-03 02:48:44] 2025-06-03 00:10:41,507 [wrapper] Pilot exit status: 0
[2025-06-03 02:48:44] 2025-06-03 00:10:41,938 [wrapper] pandaids: 6677391278
[2025-06-03 02:48:44] 2025-06-03 00:10:43,043 [wrapper] cleanup supervisor_pilot  7019 1548
[2025-06-03 02:48:44] 2025-06-03 00:10:43,166 [wrapper] Test setup, not cleaning
[2025-06-03 02:48:44] 2025-06-03 00:10:43,265 [wrapper] apfmon messages muted
[2025-06-03 02:48:44] 2025-06-03 00:10:43,383 [wrapper] ==== wrapper stdout END ====
[2025-06-03 02:48:44] 2025-06-03 00:10:43,473 [wrapper] ==== wrapper stderr END ====
[2025-06-03 02:48:44]  *** Error codes and diagnostics ***
[2025-06-03 02:48:44]     "exeErrorCode": 0,
[2025-06-03 02:48:44]     "exeErrorDiag": "",
[2025-06-03 02:48:44]     "pilotErrorCode": 0,
[2025-06-03 02:48:44]     "pilotErrorDiag": "",
[2025-06-03 02:48:44]  *** Listing of results directory ***
[2025-06-03 02:48:44] total 387128
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-03 02:48:44] -rwx------. 1 boinc boinc     37140 Jun  2 20:16 runpilot2-wrapper.sh
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:16 queuedata.json
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc       100 Jun  2 22:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 02:48:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 22:40 run_atlas
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc       105 Jun  2 22:40 job.xml
[2025-06-03 02:48:44] -rw-r--r--. 2 boinc boinc 216647304 Jun  2 22:40 EVNT.45006593._000283.pool.root.1
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc      6392 Jun  2 22:40 init_data.xml
[2025-06-03 02:48:44] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:40 start_atlas.sh
[2025-06-03 02:48:44] drwxrwx--x. 2 boinc boinc        68 Jun  2 22:40 shared
[2025-06-03 02:48:44] -rw-r--r--. 2 boinc boinc    508872 Jun  2 22:40 input.tar.gz
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc         0 Jun  2 22:40 boinc_lockfile
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc      2521 Jun  2 22:40 pandaJob.out
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc    987975 Jun  2 22:43 agis_schedconf.cvmfs.json
[2025-06-03 02:48:44] drwx------. 4 boinc boinc      4096 Jun  2 22:43 pilot3
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc 173098844 Jun  3 02:07 HITS.45006595._007057.pool.root.1
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc       531 Jun  3 02:07 boinc_task_state.xml
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc      1012 Jun  3 02:08 memory_monitor_summary.json
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc   1603667 Jun  3 02:08 agis_ddmendpoints.agis.ALL.json
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc    357466 Jun  3 02:08 log.45006595._007057.job.log.tgz.1
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc        95 Jun  3 02:09 pilot_heartbeat.json
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc      7688 Jun  3 02:10 heartbeat.json
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc      4603 Jun  3 02:10 pilotlog.txt
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc   1063568 Jun  3 02:10 log.45006595._007057.job.log.1
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc       357 Jun  3 02:10 output.list
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc       620 Jun  3 02:10 runtime_log
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc   1443840 Jun  3 02:10 result.tar.gz
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc      8673 Jun  3 02:10 runtime_log.err
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc       656 Jun  3 02:10 7seLDmdtOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQ9VKDm5rYocm.diag
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc      8192 Jun  3 02:48 boinc_mmap_file
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc        28 Jun  3 02:48 wrapper_checkpoint.txt
[2025-06-03 02:48:44] -rw-r--r--. 1 boinc boinc     20500 Jun  3 02:48 stderr.txt
[2025-06-03 02:48:44] HITS file was successfully produced:
[2025-06-03 02:48:44] -rw-------. 1 boinc boinc 173098844 Jun  3 02:07 shared/HITS.pool.root.1
[2025-06-03 02:48:44]  *** Contents of shared directory: ***
[2025-06-03 02:48:45] total 382544
[2025-06-03 02:48:45] -rw-r--r--. 2 boinc boinc 216647304 Jun  2 22:40 ATLAS.root_0
[2025-06-03 02:48:45] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:40 start_atlas.sh
[2025-06-03 02:48:45] -rw-r--r--. 2 boinc boinc    508872 Jun  2 22:40 input.tar.gz
[2025-06-03 02:48:45] -rw-------. 1 boinc boinc 173098844 Jun  3 02:07 HITS.pool.root.1
[2025-06-03 02:48:45] -rw-------. 1 boinc boinc   1443840 Jun  3 02:10 result.tar.gz
02:48:46 (27510): run_atlas exited; CPU time 43983.623905
02:48:46 (27510): called boinc_finish(0)

</stderr_txt>
]]>

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