Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:48:50 (3051): wrapper (7.7.26015): starting
02:48:50 (3051): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 02:48:50] Arguments: --nthreads 8
[2025-06-03 02:48:50] Threads: 8
[2025-06-03 02:48:50] Checking for CVMFS
[2025-06-03 02:48:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:48:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:48:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:48:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:48:53] 2.11.2.0 27863 31250 95584 146723 3 59 17317907 25165825 4632 130560 0 14905997 99.759 18232646 4922 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 02:48:53] CVMFS is ok
[2025-06-03 02:48:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:48:53] Checking for apptainer binary...
[2025-06-03 02:48:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:48:53] Running /usr/bin/apptainer --version
[2025-06-03 02:48:53] apptainer version 1.3.2-1.el7
[2025-06-03 02:48:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:55:32] cg-vwn495.simple-grid.lan
[2025-06-03 03:55:32] apptainer works
[2025-06-03 03:55:32] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:55:32] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:55:32] Starting ATLAS job with PandaID=6677391460
[2025-06-03 03:55:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:20:09]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:20:09] 2025-06-03 05:14:36,199 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6677391460/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 07:20:09] 2025-06-03 05:14:36,199 | INFO     | extracted standard info from prmon json
[2025-06-03 07:20:09] 2025-06-03 05:14:36,199 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 07:20:09] 2025-06-03 05:14:36,200 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 07:20:09] 2025-06-03 05:14:36,200 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 07:20:09] 2025-06-03 05:14:36,200 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 07:20:09] 2025-06-03 05:14:36,204 | INFO     | fitting pss+swap vs Time
[2025-06-03 07:20:09] 2025-06-03 05:14:36,204 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,206 | INFO     | sum of deviations: 8348357031.999996
[2025-06-03 07:20:09] 2025-06-03 05:14:36,206 | INFO     | mean x: 1748921664.0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,206 | INFO     | mean y: 2464040.2590673575
[2025-06-03 07:20:09] 2025-06-03 05:14:36,206 | INFO     | -- intersect: -6547405954.16485
[2025-06-03 07:20:09] 2025-06-03 05:14:36,206 | INFO     | intersect: -6547405954.16485
[2025-06-03 07:20:09] 2025-06-03 05:14:36,206 | INFO     | chi2: 2.4145241734035654
[2025-06-03 07:20:09] 2025-06-03 05:14:36,207 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,208 | INFO     | sum of deviations: 20995052468.0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,208 | INFO     | mean x: 1748921511.5
[2025-06-03 07:20:09] 2025-06-03 05:14:36,217 | INFO     | mean y: 2475218.5
[2025-06-03 07:20:09] 2025-06-03 05:14:36,217 | INFO     | -- intersect: -17819162044.612663
[2025-06-03 07:20:09] 2025-06-03 05:14:36,217 | INFO     | intersect: -17819162044.612663
[2025-06-03 07:20:09] 2025-06-03 05:14:36,217 | INFO     | chi2: 1.6056909517765303
[2025-06-03 07:20:09] 2025-06-03 05:14:36,218 | INFO     | current chi2=1.6056909517765303 (change=33.49865909550561 %)
[2025-06-03 07:20:09] 2025-06-03 05:14:36,218 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,219 | INFO     | sum of deviations: 20387613858.000004
[2025-06-03 07:20:09] 2025-06-03 05:14:36,219 | INFO     | mean x: 1748921359.0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,219 | INFO     | mean y: 2474639.6775956284
[2025-06-03 07:20:09] 2025-06-03 05:14:36,219 | INFO     | -- intersect: -18761202709.367764
[2025-06-03 07:20:09] 2025-06-03 05:14:36,220 | INFO     | intersect: -18761202709.367764
[2025-06-03 07:20:09] 2025-06-03 05:14:36,220 | INFO     | chi2: 1.6070408927223772
[2025-06-03 07:20:09] 2025-06-03 05:14:36,220 | INFO     | current chi2=1.6070408927223772 (change=-0.0840722770688388 %)
[2025-06-03 07:20:09] 2025-06-03 05:14:36,220 | INFO     | right removable region: 182
[2025-06-03 07:20:09] 2025-06-03 05:14:36,220 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,222 | INFO     | sum of deviations: -22035371569.5
[2025-06-03 07:20:09] 2025-06-03 05:14:36,222 | INFO     | mean x: 1748921816.5
[2025-06-03 07:20:09] 2025-06-03 05:14:36,222 | INFO     | mean y: 2491180.090425532
[2025-06-03 07:20:09] 2025-06-03 05:14:36,222 | INFO     | -- intersect: 18707205929.12031
[2025-06-03 07:20:09] 2025-06-03 05:14:36,222 | INFO     | intersect: 18707205929.12031
[2025-06-03 07:20:09] 2025-06-03 05:14:36,222 | INFO     | chi2: 0.9159589150531864
[2025-06-03 07:20:09] 2025-06-03 05:14:36,222 | INFO     | current chi2=0.9159589150531864 (change=62.0646202203049 %)
[2025-06-03 07:20:09] 2025-06-03 05:14:36,223 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,224 | INFO     | sum of deviations: -17574449774.0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,224 | INFO     | mean x: 1748921969.0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,224 | INFO     | mean y: 2486891.306010929
[2025-06-03 07:20:09] 2025-06-03 05:14:36,224 | INFO     | -- intersect: 16177083019.101696
[2025-06-03 07:20:09] 2025-06-03 05:14:36,224 | INFO     | intersect: 16177083019.101696
[2025-06-03 07:20:09] 2025-06-03 05:14:36,225 | INFO     | chi2: 0.893955295015826
[2025-06-03 07:20:09] 2025-06-03 05:14:36,225 | INFO     | current chi2=0.893955295015826 (change=2.402249672528453 %)
[2025-06-03 07:20:09] 2025-06-03 05:14:36,225 | INFO     | left removable region: 20
[2025-06-03 07:20:09] 2025-06-03 05:14:36,225 | INFO     | sum of square deviations: 1318277740.5
[2025-06-03 07:20:09] 2025-06-03 05:14:36,226 | INFO     | sum of deviations: 2304395536.0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,226 | INFO     | mean x: 1748921938.5
[2025-06-03 07:20:09] 2025-06-03 05:14:36,227 | INFO     | mean y: 2491282.7901234566
[2025-06-03 07:20:09] 2025-06-03 05:14:36,227 | INFO     | -- intersect: -3054685353.1161146
[2025-06-03 07:20:09] 2025-06-03 05:14:36,227 | INFO     | intersect: -3054685353.1161146
[2025-06-03 07:20:09] 2025-06-03 05:14:36,227 | INFO     | chi2: 0.0006043518776430689
[2025-06-03 07:20:09] 2025-06-03 05:14:36,227 | INFO     | -- intersect: -3054685353.1161146
[2025-06-03 07:20:09] 2025-06-03 05:14:36,227 | INFO     | current memory leak: 1.75 B/s (using 162 data points, chi2=0.00)
[2025-06-03 07:20:09] 2025-06-03 05:14:36,228 | INFO     | ..............................
[2025-06-03 07:20:09] 2025-06-03 05:14:36,228 | INFO     | . Timing measurements:
[2025-06-03 07:20:09] 2025-06-03 05:14:36,228 | INFO     | . get job = 0 s
[2025-06-03 07:20:09] 2025-06-03 05:14:36,228 | INFO     | . initial setup = 2 s
[2025-06-03 07:20:09] 2025-06-03 05:14:36,229 | INFO     | . payload setup = 11 s
[2025-06-03 07:20:09] 2025-06-03 05:14:36,229 | INFO     | . stage-in = 0 s
[2025-06-03 07:20:09] 2025-06-03 05:14:36,229 | INFO     | . payload execution = 11788 s
[2025-06-03 07:20:09] 2025-06-03 05:14:36,229 | INFO     | . stage-out = 3 s
[2025-06-03 07:20:09] 2025-06-03 05:14:36,229 | INFO     | . log creation = 1 s
[2025-06-03 07:20:09] 2025-06-03 05:14:36,229 | INFO     | ..............................
[2025-06-03 07:20:09] 2025-06-03 05:14:36,865 | INFO     | 
[2025-06-03 07:20:09] 2025-06-03 05:14:36,866 | INFO     | job summary report
[2025-06-03 07:20:09] 2025-06-03 05:14:36,866 | INFO     | --------------------------------------------------
[2025-06-03 07:20:09] 2025-06-03 05:14:36,866 | INFO     | PanDA job id: 6677391460
[2025-06-03 07:20:09] 2025-06-03 05:14:36,866 | INFO     | task id: 45006595
[2025-06-03 07:20:09] 2025-06-03 05:14:36,866 | INFO     | errors: (none)
[2025-06-03 07:20:09] 2025-06-03 05:14:36,866 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:20:09] 2025-06-03 05:14:36,866 | INFO     | pilot state: finished 
[2025-06-03 07:20:09] 2025-06-03 05:14:36,866 | INFO     | transexitcode: 0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,866 | INFO     | exeerrorcode: 0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,866 | INFO     | exeerrordiag: 
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | exitcode: 0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | exitmsg: OK
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | cpuconsumptiontime: 43979 s
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | nevents: 400
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | neventsw: 0
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | pid: 20916
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | pgrp: 20916
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | corecount: 8
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | event service: False
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | sizes: {0: 2405034, 1: 2405205, 10: 2405411, 11: 2405439, 11803: 2434548, 11807: 2443491, 11811: 2443675, 11900: 2443845}
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | --------------------------------------------------
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | 
[2025-06-03 07:20:09] 2025-06-03 05:14:36,867 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 07:20:09] 2025-06-03 05:14:37,246 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,247 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,247 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,247 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,247 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,247 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,248 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,248 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,248 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,248 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,248 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,248 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,248 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:20:09] 2025-06-03 05:14:37,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:20:09] 2025-06-03 05:14:37,248 | INFO     | job 6677391460 has completed (purged errors)
[2025-06-03 07:20:09] 2025-06-03 05:14:37,249 | INFO     | overall cleanup function is called
[2025-06-03 07:20:09] 2025-06-03 05:14:38,257 | INFO     | --- collectZombieJob: --- 10, [20916]
[2025-06-03 07:20:09] 2025-06-03 05:14:38,258 | INFO     | zombie collector waiting for pid 20916
[2025-06-03 07:20:09] 2025-06-03 05:14:38,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:20:09] 2025-06-03 05:14:38,258 | INFO     | collected zombie processes
[2025-06-03 07:20:09] 2025-06-03 05:14:38,258 | INFO     | will attempt to kill all subprocesses of pid=20916
[2025-06-03 07:20:09] 2025-06-03 05:14:38,344 | INFO     | process IDs to be killed: [20916] (in reverse order)
[2025-06-03 07:20:09] 2025-06-03 05:14:38,920 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:20:09] 2025-06-03 05:14:38,921 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:20:09] 2025-06-03 05:14:38,924 | INFO     | did not find any defunct processes belonging to 20916
[2025-06-03 07:20:09] 2025-06-03 05:14:38,927 | INFO     | did not find any defunct processes belonging to 20916
[2025-06-03 07:20:09] 2025-06-03 05:14:38,928 | INFO     | ready for new job
[2025-06-03 07:20:09] 2025-06-03 05:14:38,928 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:20:09] 2025-06-03 05:14:38,929 | INFO     | **************************************
[2025-06-03 07:20:09] 2025-06-03 05:14:38,929 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:20:09] 2025-06-03 05:14:38,930 | INFO     | **************************************
[2025-06-03 07:20:09] 2025-06-03 05:14:38,930 | INFO     | 
[2025-06-03 07:20:09] 2025-06-03 05:14:38,930 | INFO     | pilot is running in a VM
[2025-06-03 07:20:09] 2025-06-03 05:14:38,930 | INFO     | architecture information:
[2025-06-03 07:20:09] 2025-06-03 05:14:38,934 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:20:09] 2025-06-03 05:14:39,119 | INFO     | cat /etc/os-release:
[2025-06-03 07:20:09] NAME="CentOS Linux"
[2025-06-03 07:20:09] VERSION="7 (Core)"
[2025-06-03 07:20:09] ID="centos"
[2025-06-03 07:20:09] ID_LIKE="rhel fedora"
[2025-06-03 07:20:09] VERSION_ID="7"
[2025-06-03 07:20:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:20:09] ANSI_COLOR="0;31"
[2025-06-03 07:20:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:20:09] HOME_URL="https://www.centos.org/"
[2025-06-03 07:20:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:20:09] 
[2025-06-03 07:20:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:20:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:20:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:20:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:20:09] 
[2025-06-03 07:20:09] 2025-06-03 05:14:39,119 | INFO     | **************************************
[2025-06-03 07:20:09] 2025-06-03 05:14:39,623 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 07:20:09] 2025-06-03 05:14:39,717 | INFO     | sufficient remaining disk space (496935895040 B)
[2025-06-03 07:20:09] 2025-06-03 05:14:39,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:20:09] 2025-06-03 05:14:39,718 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:20:09] 2025-06-03 05:14:39,718 | INFO     | update_server=False
[2025-06-03 07:20:09] 2025-06-03 05:14:39,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:20:09] 2025-06-03 05:14:39,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:20:09] 2025-06-03 05:14:39,779 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:20:09] 2025-06-03 05:14:39,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:20:09] 2025-06-03 05:14:39,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:20:09] 2025-06-03 05:14:39,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:20:09] 2025-06-03 05:14:40,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:20:09] 2025-06-03 05:14:40,017 | INFO     | aborting loop
[2025-06-03 07:20:09] 2025-06-03 05:14:40,484 | INFO     | all data control threads have been joined
[2025-06-03 07:20:09] 2025-06-03 05:14:40,724 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:40,797 | INFO     | all payload control threads have been joined
[2025-06-03 07:20:09] 2025-06-03 05:14:40,830 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:41,022 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:41,134 | INFO     | all job control threads have been joined
[2025-06-03 07:20:09] 2025-06-03 05:14:41,315 | INFO     | [job] validate thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:41,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:20:09] 2025-06-03 05:14:41,491 | INFO     | [data] control thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:41,790 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:41,804 | INFO     | [payload] control thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:41,855 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:41,878 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:41,922 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:42,043 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:42,070 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:42,141 | INFO     | [job] control thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:42,171 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:42,392 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:43,730 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:20:09] 2025-06-03 05:14:44,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139968241121088)>', '<ExcThread(monitor, started 139967682574080)>']
[2025-06-03 07:20:09] 2025-06-03 05:14:44,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:20:09] 2025-06-03 05:14:44,809 | INFO     | [monitor] control thread has ended
[2025-06-03 07:20:09] 2025-06-03 05:14:49,737 | INFO     | all workflow threads have been joined
[2025-06-03 07:20:09] 2025-06-03 05:14:49,738 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:20:09] 2025-06-03 05:14:49,738 | INFO     | traces error code: 0
[2025-06-03 07:20:09] 2025-06-03 05:14:49,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:20:09] 2025-06-03 05:14:50,036 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:20:09] 2025-06-03 05:14:50,096 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:20:09] 2025-06-03 05:14:50,170 [wrapper] pilotpid: 12529
[2025-06-03 07:20:09] 2025-06-03 05:14:50,191 [wrapper] Pilot exit status: 0
[2025-06-03 07:20:09] 2025-06-03 05:14:50,565 [wrapper] pandaids: 6677391460
[2025-06-03 07:20:09] 2025-06-03 05:14:51,497 [wrapper] cleanup supervisor_pilot 17228 12530
[2025-06-03 07:20:09] 2025-06-03 05:14:51,571 [wrapper] Test setup, not cleaning
[2025-06-03 07:20:09] 2025-06-03 05:14:51,631 [wrapper] apfmon messages muted
[2025-06-03 07:20:09] 2025-06-03 05:14:51,744 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:20:09] 2025-06-03 05:14:51,838 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:20:09]  *** Error codes and diagnostics ***
[2025-06-03 07:20:09]     "exeErrorCode": 0,
[2025-06-03 07:20:09]     "exeErrorDiag": "",
[2025-06-03 07:20:09]     "pilotErrorCode": 0,
[2025-06-03 07:20:09]     "pilotErrorDiag": "",
[2025-06-03 07:20:09]  *** Listing of results directory ***
[2025-06-03 07:20:09] total 389224
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:14 queuedata.json
[2025-06-03 07:20:09] -rwx------. 1 boinc boinc     37140 Jun  2 20:16 runpilot2-wrapper.sh
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc       100 Jun  3 02:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:20:09] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 02:48 run_atlas
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc       105 Jun  3 02:48 job.xml
[2025-06-03 07:20:09] -rw-r--r--. 2 boinc boinc 214305592 Jun  3 02:48 EVNT.45006593._000286.pool.root.1
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc      6392 Jun  3 02:48 init_data.xml
[2025-06-03 07:20:09] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:48 start_atlas.sh
[2025-06-03 07:20:09] drwxrwx--x. 2 boinc boinc        68 Jun  3 02:48 shared
[2025-06-03 07:20:09] -rw-r--r--. 2 boinc boinc    508876 Jun  3 02:48 input.tar.gz
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc         0 Jun  3 02:48 boinc_lockfile
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc      2520 Jun  3 03:55 pandaJob.out
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc    988081 Jun  3 03:55 agis_schedconf.cvmfs.json
[2025-06-03 07:20:09] drwx------. 4 boinc boinc      4096 Jun  3 03:55 pilot3
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc 177590161 Jun  3 07:11 HITS.45006595._007144.pool.root.1
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc       531 Jun  3 07:11 boinc_task_state.xml
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc      1018 Jun  3 07:12 memory_monitor_summary.json
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc   1603667 Jun  3 07:13 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc    373797 Jun  3 07:13 log.45006595._007144.job.log.tgz.1
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc        95 Jun  3 07:13 pilot_heartbeat.json
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc      7684 Jun  3 07:14 heartbeat.json
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc      4417 Jun  3 07:14 pilotlog.txt
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc   1051139 Jun  3 07:14 log.45006595._007144.job.log.1
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc       357 Jun  3 07:14 output.list
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc       620 Jun  3 07:14 runtime_log
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc   1443840 Jun  3 07:14 result.tar.gz
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc      8673 Jun  3 07:14 runtime_log.err
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc       656 Jun  3 07:14 CmsLDmusOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmM9VKDmn1kEBn.diag
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc      8192 Jun  3 07:20 boinc_mmap_file
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc        28 Jun  3 07:20 wrapper_checkpoint.txt
[2025-06-03 07:20:09] -rw-r--r--. 1 boinc boinc     20477 Jun  3 07:20 stderr.txt
[2025-06-03 07:20:09] HITS file was successfully produced:
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc 177590161 Jun  3 07:11 shared/HITS.pool.root.1
[2025-06-03 07:20:09]  *** Contents of shared directory: ***
[2025-06-03 07:20:09] total 384640
[2025-06-03 07:20:09] -rw-r--r--. 2 boinc boinc 214305592 Jun  3 02:48 ATLAS.root_0
[2025-06-03 07:20:09] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:48 start_atlas.sh
[2025-06-03 07:20:09] -rw-r--r--. 2 boinc boinc    508876 Jun  3 02:48 input.tar.gz
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc 177590161 Jun  3 07:11 HITS.pool.root.1
[2025-06-03 07:20:09] -rw-------. 1 boinc boinc   1443840 Jun  3 07:14 result.tar.gz
07:20:11 (3051): run_atlas exited; CPU time 44118.826597
07:20:11 (3051): called boinc_finish(0)

</stderr_txt>
]]>

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