Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:51:46 (8620): wrapper (7.7.26015): starting
02:51:46 (8620): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 02:51:46] Arguments: --nthreads 8
[2025-06-03 02:51:46] Threads: 8
[2025-06-03 02:51:46] Checking for CVMFS
[2025-06-03 02:51:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:51:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:51:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:51:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:51:48] 2.11.2.0 13816 31094 88620 146723 2 60 24022863 25165824 4637 130560 0 15067756 99.795 17889115 2370 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 02:51:48] CVMFS is ok
[2025-06-03 02:51:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:51:48] Checking for apptainer binary...
[2025-06-03 02:51:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:51:48] Running /usr/bin/apptainer --version
[2025-06-03 02:51:48] apptainer version 1.3.2-1.el7
[2025-06-03 02:51:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:22:14] cg-vwn369.simple-grid.lan
[2025-06-03 03:22:14] apptainer works
[2025-06-03 03:22:14] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:22:14] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:22:14] Starting ATLAS job with PandaID=6677390715
[2025-06-03 03:22:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:28:09]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:28:09] 2025-06-03 05:06:06,048 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6677390715/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 07:28:09] 2025-06-03 05:06:06,049 | INFO     | extracted standard info from prmon json
[2025-06-03 07:28:09] 2025-06-03 05:06:06,049 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 07:28:09] 2025-06-03 05:06:06,049 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 07:28:09] 2025-06-03 05:06:06,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 07:28:09] 2025-06-03 05:06:06,050 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 07:28:09] 2025-06-03 05:06:06,055 | INFO     | fitting pss+swap vs Time
[2025-06-03 07:28:09] 2025-06-03 05:06:06,056 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,057 | INFO     | sum of deviations: 49644108026.49999
[2025-06-03 07:28:09] 2025-06-03 05:06:06,058 | INFO     | mean x: 1748920737.5
[2025-06-03 07:28:09] 2025-06-03 05:06:06,058 | INFO     | mean y: 2436980.331730769
[2025-06-03 07:28:09] 2025-06-03 05:06:06,058 | INFO     | -- intersect: -31113253935.269062
[2025-06-03 07:28:09] 2025-06-03 05:06:06,058 | INFO     | intersect: -31113253935.269062
[2025-06-03 07:28:09] 2025-06-03 05:06:06,066 | INFO     | chi2: 6.668456403135803
[2025-06-03 07:28:09] 2025-06-03 05:06:06,066 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,068 | INFO     | sum of deviations: 62086969797.00001
[2025-06-03 07:28:09] 2025-06-03 05:06:06,068 | INFO     | mean x: 1748920585.0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,068 | INFO     | mean y: 2446434.1231527096
[2025-06-03 07:28:09] 2025-06-03 05:06:06,069 | INFO     | -- intersect: -41859031288.87391
[2025-06-03 07:28:09] 2025-06-03 05:06:06,069 | INFO     | intersect: -41859031288.87391
[2025-06-03 07:28:09] 2025-06-03 05:06:06,069 | INFO     | chi2: 5.969427995976703
[2025-06-03 07:28:09] 2025-06-03 05:06:06,069 | INFO     | current chi2=5.969427995976703 (change=10.482611940454248 %)
[2025-06-03 07:28:09] 2025-06-03 05:06:06,069 | INFO     | right removable region: 202
[2025-06-03 07:28:09] 2025-06-03 05:06:06,070 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,071 | INFO     | sum of deviations: -21730966594.0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,072 | INFO     | mean x: 1748920890.0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,072 | INFO     | mean y: 2492334.5467980294
[2025-06-03 07:28:09] 2025-06-03 05:06:06,072 | INFO     | -- intersect: 14654367528.20087
[2025-06-03 07:28:09] 2025-06-03 05:06:06,072 | INFO     | intersect: 14654367528.20087
[2025-06-03 07:28:09] 2025-06-03 05:06:06,072 | INFO     | chi2: 1.86728577612623
[2025-06-03 07:28:09] 2025-06-03 05:06:06,073 | INFO     | current chi2=1.86728577612623 (change=71.99823072625698 %)
[2025-06-03 07:28:09] 2025-06-03 05:06:06,073 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 07:28:09] 2025-06-03 05:06:06,075 | INFO     | sum of deviations: -47477797489.0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,075 | INFO     | mean x: 1748921042.5
[2025-06-03 07:28:09] 2025-06-03 05:06:06,075 | INFO     | mean y: 2513137.616161616
[2025-06-03 07:28:09] 2025-06-03 05:06:06,075 | INFO     | -- intersect: 34500825484.56231
[2025-06-03 07:28:09] 2025-06-03 05:06:06,075 | INFO     | intersect: 34500825484.56231
[2025-06-03 07:28:09] 2025-06-03 05:06:06,075 | INFO     | chi2: 0.9641403620772845
[2025-06-03 07:28:09] 2025-06-03 05:06:06,076 | INFO     | current chi2=0.9641403620772845 (change=48.36674844289566 %)
[2025-06-03 07:28:09] 2025-06-03 05:06:06,076 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,082 | INFO     | sum of deviations: -43953631129.99999
[2025-06-03 07:28:09] 2025-06-03 05:06:06,082 | INFO     | mean x: 1748921195.0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,082 | INFO     | mean y: 2510078.409326425
[2025-06-03 07:28:09] 2025-06-03 05:06:06,082 | INFO     | -- intersect: 34487198667.86591
[2025-06-03 07:28:09] 2025-06-03 05:06:06,082 | INFO     | intersect: 34487198667.86591
[2025-06-03 07:28:09] 2025-06-03 05:06:06,083 | INFO     | chi2: 0.9547489013747487
[2025-06-03 07:28:09] 2025-06-03 05:06:06,083 | INFO     | current chi2=0.9547489013747487 (change=0.9740760860069684 %)
[2025-06-03 07:28:09] 2025-06-03 05:06:06,083 | INFO     | left removable region: 30
[2025-06-03 07:28:09] 2025-06-03 05:06:06,084 | INFO     | sum of square deviations: 1577789583.0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,085 | INFO     | sum of deviations: -10883043519.5
[2025-06-03 07:28:09] 2025-06-03 05:06:06,085 | INFO     | mean x: 1748921469.5
[2025-06-03 07:28:09] 2025-06-03 05:06:06,085 | INFO     | mean y: 2502800.843023256
[2025-06-03 07:28:09] 2025-06-03 05:06:06,085 | INFO     | -- intersect: 12065954524.593182
[2025-06-03 07:28:09] 2025-06-03 05:06:06,095 | INFO     | intersect: 12065954524.593182
[2025-06-03 07:28:09] 2025-06-03 05:06:06,095 | INFO     | chi2: 0.09911138707198035
[2025-06-03 07:28:09] 2025-06-03 05:06:06,096 | INFO     | -- intersect: 12065954524.593182
[2025-06-03 07:28:09] 2025-06-03 05:06:06,096 | INFO     | current memory leak: -6.90 B/s (using 172 data points, chi2=0.10)
[2025-06-03 07:28:09] 2025-06-03 05:06:06,097 | INFO     | ..............................
[2025-06-03 07:28:09] 2025-06-03 05:06:06,097 | INFO     | . Timing measurements:
[2025-06-03 07:28:09] 2025-06-03 05:06:06,097 | INFO     | . get job = 0 s
[2025-06-03 07:28:09] 2025-06-03 05:06:06,097 | INFO     | . initial setup = 7 s
[2025-06-03 07:28:09] 2025-06-03 05:06:06,097 | INFO     | . payload setup = 153 s
[2025-06-03 07:28:09] 2025-06-03 05:06:06,097 | INFO     | . stage-in = 0 s
[2025-06-03 07:28:09] 2025-06-03 05:06:06,098 | INFO     | . payload execution = 12789 s
[2025-06-03 07:28:09] 2025-06-03 05:06:06,098 | INFO     | . stage-out = 3 s
[2025-06-03 07:28:09] 2025-06-03 05:06:06,098 | INFO     | . log creation = 1 s
[2025-06-03 07:28:09] 2025-06-03 05:06:06,098 | INFO     | ..............................
[2025-06-03 07:28:09] 2025-06-03 05:06:06,255 | INFO     | 
[2025-06-03 07:28:09] 2025-06-03 05:06:06,255 | INFO     | job summary report
[2025-06-03 07:28:09] 2025-06-03 05:06:06,256 | INFO     | --------------------------------------------------
[2025-06-03 07:28:09] 2025-06-03 05:06:06,256 | INFO     | PanDA job id: 6677390715
[2025-06-03 07:28:09] 2025-06-03 05:06:06,256 | INFO     | task id: 45006595
[2025-06-03 07:28:09] 2025-06-03 05:06:06,256 | INFO     | errors: (none)
[2025-06-03 07:28:09] 2025-06-03 05:06:06,256 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:28:09] 2025-06-03 05:06:06,256 | INFO     | pilot state: finished 
[2025-06-03 07:28:09] 2025-06-03 05:06:06,256 | INFO     | transexitcode: 0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,256 | INFO     | exeerrorcode: 0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,256 | INFO     | exeerrordiag: 
[2025-06-03 07:28:09] 2025-06-03 05:06:06,257 | INFO     | exitcode: 0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,257 | INFO     | exitmsg: OK
[2025-06-03 07:28:09] 2025-06-03 05:06:06,257 | INFO     | cpuconsumptiontime: 47161 s
[2025-06-03 07:28:09] 2025-06-03 05:06:06,257 | INFO     | nevents: 400
[2025-06-03 07:28:09] 2025-06-03 05:06:06,257 | INFO     | neventsw: 0
[2025-06-03 07:28:09] 2025-06-03 05:06:06,257 | INFO     | pid: 5250
[2025-06-03 07:28:09] 2025-06-03 05:06:06,257 | INFO     | pgrp: 5250
[2025-06-03 07:28:09] 2025-06-03 05:06:06,257 | INFO     | corecount: 8
[2025-06-03 07:28:09] 2025-06-03 05:06:06,257 | INFO     | event service: False
[2025-06-03 07:28:09] 2025-06-03 05:06:06,257 | INFO     | sizes: {0: 2404944, 1: 2405199, 12: 2405199, 23: 2405227, 33: 2405255, 44: 2405311, 55: 2405467, 66: 2405495, 76: 2405523, 79: 2405785, 87: 2405841, 12946: 2435334
[2025-06-03 07:28:09] 2025-06-03 05:06:06,258 | INFO     | --------------------------------------------------
[2025-06-03 07:28:09] 2025-06-03 05:06:06,258 | INFO     | 
[2025-06-03 07:28:09] 2025-06-03 05:06:06,258 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 07:28:09] 2025-06-03 05:06:06,298 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,299 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,299 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,299 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,299 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,299 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,300 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,300 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,300 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,300 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,301 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:28:09] 2025-06-03 05:06:06,301 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,301 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:28:09] 2025-06-03 05:06:06,301 | INFO     | job 6677390715 has completed (purged errors)
[2025-06-03 07:28:09] 2025-06-03 05:06:06,301 | INFO     | overall cleanup function is called
[2025-06-03 07:28:09] 2025-06-03 05:06:07,311 | INFO     | --- collectZombieJob: --- 10, [5250]
[2025-06-03 07:28:09] 2025-06-03 05:06:07,311 | INFO     | zombie collector waiting for pid 5250
[2025-06-03 07:28:09] 2025-06-03 05:06:07,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:28:09] 2025-06-03 05:06:07,311 | INFO     | collected zombie processes
[2025-06-03 07:28:09] 2025-06-03 05:06:07,311 | INFO     | will attempt to kill all subprocesses of pid=5250
[2025-06-03 07:28:09] 2025-06-03 05:06:07,468 | INFO     | process IDs to be killed: [5250] (in reverse order)
[2025-06-03 07:28:09] 2025-06-03 05:06:08,171 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:28:09] 2025-06-03 05:06:08,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:28:09] 2025-06-03 05:06:08,175 | INFO     | did not find any defunct processes belonging to 5250
[2025-06-03 07:28:09] 2025-06-03 05:06:08,178 | INFO     | did not find any defunct processes belonging to 5250
[2025-06-03 07:28:09] 2025-06-03 05:06:08,179 | INFO     | ready for new job
[2025-06-03 07:28:09] 2025-06-03 05:06:08,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:28:09] 2025-06-03 05:06:08,181 | INFO     | **************************************
[2025-06-03 07:28:09] 2025-06-03 05:06:08,181 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:28:09] 2025-06-03 05:06:08,181 | INFO     | **************************************
[2025-06-03 07:28:09] 2025-06-03 05:06:08,181 | INFO     | 
[2025-06-03 07:28:09] 2025-06-03 05:06:08,182 | INFO     | pilot is running in a VM
[2025-06-03 07:28:09] 2025-06-03 05:06:08,182 | INFO     | architecture information:
[2025-06-03 07:28:09] 2025-06-03 05:06:08,183 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:28:09] 2025-06-03 05:06:08,498 | INFO     | cat /etc/os-release:
[2025-06-03 07:28:09] NAME="CentOS Linux"
[2025-06-03 07:28:09] VERSION="7 (Core)"
[2025-06-03 07:28:09] ID="centos"
[2025-06-03 07:28:09] ID_LIKE="rhel fedora"
[2025-06-03 07:28:09] VERSION_ID="7"
[2025-06-03 07:28:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:28:09] ANSI_COLOR="0;31"
[2025-06-03 07:28:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:28:09] HOME_URL="https://www.centos.org/"
[2025-06-03 07:28:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:28:09] 
[2025-06-03 07:28:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:28:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:28:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:28:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:28:09] 
[2025-06-03 07:28:09] 2025-06-03 05:06:08,499 | INFO     | **************************************
[2025-06-03 07:28:09] 2025-06-03 05:06:09,001 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 07:28:09] 2025-06-03 05:06:09,261 | INFO     | sufficient remaining disk space (496531144704 B)
[2025-06-03 07:28:09] 2025-06-03 05:06:09,261 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:28:09] 2025-06-03 05:06:09,261 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:28:09] 2025-06-03 05:06:09,262 | INFO     | update_server=False
[2025-06-03 07:28:09] 2025-06-03 05:06:09,262 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:28:09] 2025-06-03 05:06:09,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:28:09] 2025-06-03 05:06:09,263 | INFO     | aborting loop
[2025-06-03 07:28:09] 2025-06-03 05:06:09,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:28:09] 2025-06-03 05:06:09,402 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:28:09] 2025-06-03 05:06:09,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:28:09] 2025-06-03 05:06:09,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:28:09] 2025-06-03 05:06:09,730 | INFO     | all data control threads have been joined
[2025-06-03 07:28:09] 2025-06-03 05:06:10,268 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:10,271 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:10,427 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:10,462 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:10,546 | INFO     | all job control threads have been joined
[2025-06-03 07:28:09] 2025-06-03 05:06:10,591 | INFO     | all payload control threads have been joined
[2025-06-03 07:28:09] 2025-06-03 05:06:10,736 | INFO     | [data] control thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:10,832 | INFO     | [job] validate thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:10,925 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:10,958 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:11,020 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:11,021 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:11,272 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:11,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:28:09] 2025-06-03 05:06:11,552 | INFO     | [job] control thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:11,598 | INFO     | [payload] control thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:11,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:12,284 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:12,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:28:09] 2025-06-03 05:06:16,429 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:28:09] 2025-06-03 05:06:16,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691536938816)>', '<ExcThread(monitor, started 140691099342592)>']
[2025-06-03 07:28:09] 2025-06-03 05:06:17,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:28:09] 2025-06-03 05:06:17,450 | INFO     | [monitor] control thread has ended
[2025-06-03 07:28:09] 2025-06-03 05:06:21,831 | INFO     | all workflow threads have been joined
[2025-06-03 07:28:09] 2025-06-03 05:06:21,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:28:09] 2025-06-03 05:06:21,831 | INFO     | traces error code: 0
[2025-06-03 07:28:09] 2025-06-03 05:06:21,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:28:09] 2025-06-03 05:06:22,333 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:28:09] 2025-06-03 05:06:22,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:28:09] 2025-06-03 05:06:22,482 [wrapper] pilotpid: 29087
[2025-06-03 07:28:09] 2025-06-03 05:06:22,588 [wrapper] Pilot exit status: 0
[2025-06-03 07:28:09] 2025-06-03 05:06:23,097 [wrapper] pandaids: 6677390715
[2025-06-03 07:28:09] 2025-06-03 05:06:24,067 [wrapper] cleanup supervisor_pilot  2793 29088
[2025-06-03 07:28:09] 2025-06-03 05:06:24,122 [wrapper] Test setup, not cleaning
[2025-06-03 07:28:09] 2025-06-03 05:06:24,221 [wrapper] apfmon messages muted
[2025-06-03 07:28:09] 2025-06-03 05:06:24,285 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:28:09] 2025-06-03 05:06:24,402 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:28:09]  *** Error codes and diagnostics ***
[2025-06-03 07:28:09]     "exeErrorCode": 0,
[2025-06-03 07:28:09]     "exeErrorDiag": "",
[2025-06-03 07:28:09]     "pilotErrorCode": 0,
[2025-06-03 07:28:09]     "pilotErrorDiag": "",
[2025-06-03 07:28:09]  *** Listing of results directory ***
[2025-06-03 07:28:09] total 388472
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:05 queuedata.json
[2025-06-03 07:28:09] -rwx------. 1 boinc boinc     37140 Jun  2 20:06 runpilot2-wrapper.sh
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc       100 Jun  3 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:28:09] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 02:51 run_atlas
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc       105 Jun  3 02:51 job.xml
[2025-06-03 07:28:09] -rw-r--r--. 2 boinc boinc 218371827 Jun  3 02:51 EVNT.45006593._000273.pool.root.1
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc      6391 Jun  3 02:51 init_data.xml
[2025-06-03 07:28:09] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:51 start_atlas.sh
[2025-06-03 07:28:09] drwxrwx--x. 2 boinc boinc        68 Jun  3 02:51 shared
[2025-06-03 07:28:09] -rw-r--r--. 2 boinc boinc    508876 Jun  3 02:51 input.tar.gz
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc         0 Jun  3 02:51 boinc_lockfile
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc      2518 Jun  3 03:22 pandaJob.out
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc    988081 Jun  3 03:25 agis_schedconf.cvmfs.json
[2025-06-03 07:28:09] drwx------. 4 boinc boinc      4096 Jun  3 03:25 pilot3
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc 172628025 Jun  3 07:03 HITS.45006595._006803.pool.root.1
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc       531 Jun  3 07:03 boinc_task_state.xml
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc      1016 Jun  3 07:04 memory_monitor_summary.json
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc   1603667 Jun  3 07:04 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc    359511 Jun  3 07:04 log.45006595._006803.job.log.tgz.1
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc        95 Jun  3 07:05 pilot_heartbeat.json
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc      7683 Jun  3 07:06 heartbeat.json
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc      4416 Jun  3 07:06 pilotlog.txt
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc   1123744 Jun  3 07:06 log.45006595._006803.job.log.1
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc       357 Jun  3 07:06 output.list
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc       620 Jun  3 07:06 runtime_log
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc   1505280 Jun  3 07:06 result.tar.gz
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc       656 Jun  3 07:06 vPyNDmujOg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXvfKDmlyHs0n.diag
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc      8659 Jun  3 07:06 runtime_log.err
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc      8192 Jun  3 07:28 boinc_mmap_file
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc        28 Jun  3 07:28 wrapper_checkpoint.txt
[2025-06-03 07:28:09] -rw-r--r--. 1 boinc boinc     20509 Jun  3 07:28 stderr.txt
[2025-06-03 07:28:09] HITS file was successfully produced:
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc 172628025 Jun  3 07:03 shared/HITS.pool.root.1
[2025-06-03 07:28:09]  *** Contents of shared directory: ***
[2025-06-03 07:28:09] total 383828
[2025-06-03 07:28:09] -rw-r--r--. 2 boinc boinc 218371827 Jun  3 02:51 ATLAS.root_0
[2025-06-03 07:28:09] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:51 start_atlas.sh
[2025-06-03 07:28:09] -rw-r--r--. 2 boinc boinc    508876 Jun  3 02:51 input.tar.gz
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc 172628025 Jun  3 07:03 HITS.pool.root.1
[2025-06-03 07:28:09] -rw-------. 1 boinc boinc   1505280 Jun  3 07:06 result.tar.gz
07:28:11 (8620): run_atlas exited; CPU time 47347.160496
07:28:11 (8620): called boinc_finish(0)

</stderr_txt>
]]>

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