Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:35:50 (20089): wrapper (7.7.26015): starting
06:35:50 (20089): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:35:50] Arguments: --nthreads 8
[2025-06-03 06:35:50] Threads: 8
[2025-06-03 06:35:50] Checking for CVMFS
[2025-06-03 06:35:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:35:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:35:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:35:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:35:52] 2.11.2.0 14372 31283 98464 146729 2 59 22023949 25165825 4635 130560 0 15900578 99.831 18059437 2158 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 06:35:52] CVMFS is ok
[2025-06-03 06:35:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:35:52] Checking for apptainer binary...
[2025-06-03 06:35:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:35:52] Running /usr/bin/apptainer --version
[2025-06-03 06:35:52] apptainer version 1.3.2-1.el7
[2025-06-03 06:35:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:39:16] cg-vwn440.simple-grid.lan
[2025-06-03 06:39:16] apptainer works
[2025-06-03 06:39:16] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:39:16] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:39:16] Starting ATLAS job with PandaID=6677386295
[2025-06-03 06:39:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:41:28]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:41:28] 2025-06-03 08:26:00,814 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:41:28] 2025-06-03 08:26:00,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:41:28] 2025-06-03 08:26:00,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:41:28] 2025-06-03 08:26:00,819 | INFO     | fitting pss+swap vs Time
[2025-06-03 10:41:28] 2025-06-03 08:26:00,820 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 10:41:28] 2025-06-03 08:26:00,822 | INFO     | sum of deviations: 42860583872.5
[2025-06-03 10:41:28] 2025-06-03 08:26:00,822 | INFO     | mean x: 1748932638.5
[2025-06-03 10:41:28] 2025-06-03 08:26:00,822 | INFO     | mean y: 2485064.7952380953
[2025-06-03 10:41:28] 2025-06-03 08:26:00,822 | INFO     | -- intersect: -26101373365.124195
[2025-06-03 10:41:28] 2025-06-03 08:26:00,822 | INFO     | intersect: -26101373365.124195
[2025-06-03 10:41:28] 2025-06-03 08:26:00,822 | INFO     | chi2: 8.578240867702467
[2025-06-03 10:41:28] 2025-06-03 08:26:00,823 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 10:41:28] 2025-06-03 08:26:00,824 | INFO     | sum of deviations: 56826947361.00002
[2025-06-03 10:41:28] 2025-06-03 08:26:00,824 | INFO     | mean x: 1748932486.0
[2025-06-03 10:41:28] 2025-06-03 08:26:00,824 | INFO     | mean y: 2495496.0390243903
[2025-06-03 10:41:28] 2025-06-03 08:26:00,825 | INFO     | -- intersect: -37202195263.38383
[2025-06-03 10:41:28] 2025-06-03 08:26:00,825 | INFO     | intersect: -37202195263.38383
[2025-06-03 10:41:28] 2025-06-03 08:26:00,825 | INFO     | chi2: 7.891112005525882
[2025-06-03 10:41:28] 2025-06-03 08:26:00,825 | INFO     | current chi2=7.891112005525882 (change=8.01013719215629 %)
[2025-06-03 10:41:28] 2025-06-03 08:26:00,825 | INFO     | right removable region: 204
[2025-06-03 10:41:28] 2025-06-03 08:26:00,826 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 10:41:28] 2025-06-03 08:26:00,829 | INFO     | sum of deviations: -32443145789.00003
[2025-06-03 10:41:28] 2025-06-03 08:26:00,830 | INFO     | mean x: 1748932791.0
[2025-06-03 10:41:28] 2025-06-03 08:26:00,830 | INFO     | mean y: 2542370.6097560977
[2025-06-03 10:41:28] 2025-06-03 08:26:00,830 | INFO     | -- intersect: 21243124046.984425
[2025-06-03 10:41:28] 2025-06-03 08:26:00,830 | INFO     | intersect: 21243124046.984425
[2025-06-03 10:41:28] 2025-06-03 08:26:00,830 | INFO     | chi2: 3.317077012888058
[2025-06-03 10:41:28] 2025-06-03 08:26:00,830 | INFO     | current chi2=3.317077012888058 (change=61.33150066493202 %)
[2025-06-03 10:41:28] 2025-06-03 08:26:00,831 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 10:41:28] 2025-06-03 08:26:00,832 | INFO     | sum of deviations: -80189927322.5
[2025-06-03 10:41:28] 2025-06-03 08:26:00,833 | INFO     | mean x: 1748932943.5
[2025-06-03 10:41:28] 2025-06-03 08:26:00,833 | INFO     | mean y: 2580379.965
[2025-06-03 10:41:28] 2025-06-03 08:26:00,833 | INFO     | -- intersect: 56539927284.95891
[2025-06-03 10:41:28] 2025-06-03 08:26:00,833 | INFO     | intersect: 56539927284.95891
[2025-06-03 10:41:28] 2025-06-03 08:26:00,833 | INFO     | chi2: 1.0819767159941855
[2025-06-03 10:41:28] 2025-06-03 08:26:00,833 | INFO     | current chi2=1.0819767159941855 (change=67.38162207900781 %)
[2025-06-03 10:41:28] 2025-06-03 08:26:00,834 | INFO     | sum of square deviations: 2299168690.0
[2025-06-03 10:41:28] 2025-06-03 08:26:00,838 | INFO     | sum of deviations: -85900752477.0
[2025-06-03 10:41:28] 2025-06-03 08:26:00,839 | INFO     | mean x: 1748933096.0
[2025-06-03 10:41:28] 2025-06-03 08:26:00,839 | INFO     | mean y: 2585121.1128205126
[2025-06-03 10:41:28] 2025-06-03 08:26:00,839 | INFO     | -- intersect: 65345623947.17185
[2025-06-03 10:41:28] 2025-06-03 08:26:00,839 | INFO     | intersect: 65345623947.17185
[2025-06-03 10:41:28] 2025-06-03 08:26:00,839 | INFO     | chi2: 0.9708103631392407
[2025-06-03 10:41:28] 2025-06-03 08:26:00,840 | INFO     | current chi2=0.9708103631392407 (change=10.274375706209025 %)
[2025-06-03 10:41:28] 2025-06-03 08:26:00,840 | INFO     | left removable region: 30
[2025-06-03 10:41:28] 2025-06-03 08:26:00,840 | INFO     | sum of square deviations: 1633472487.5
[2025-06-03 10:41:28] 2025-06-03 08:26:00,841 | INFO     | sum of deviations: -58169958985.00001
[2025-06-03 10:41:28] 2025-06-03 08:26:00,842 | INFO     | mean x: 1748933370.5
[2025-06-03 10:41:28] 2025-06-03 08:26:00,842 | INFO     | mean y: 2588314.379310345
[2025-06-03 10:41:28] 2025-06-03 08:26:00,842 | INFO     | -- intersect: 62284250973.5325
[2025-06-03 10:41:28] 2025-06-03 08:26:00,842 | INFO     | intersect: 62284250973.5325
[2025-06-03 10:41:28] 2025-06-03 08:26:00,842 | INFO     | chi2: 0.16757749483637163
[2025-06-03 10:41:28] 2025-06-03 08:26:00,842 | INFO     | -- intersect: 62284250973.5325
[2025-06-03 10:41:28] 2025-06-03 08:26:00,842 | INFO     | current memory leak: -35.61 B/s (using 174 data points, chi2=0.17)
[2025-06-03 10:41:28] 2025-06-03 08:26:00,843 | INFO     | ..............................
[2025-06-03 10:41:28] 2025-06-03 08:26:00,843 | INFO     | . Timing measurements:
[2025-06-03 10:41:28] 2025-06-03 08:26:00,843 | INFO     | . get job = 0 s
[2025-06-03 10:41:28] 2025-06-03 08:26:00,844 | INFO     | . initial setup = 8 s
[2025-06-03 10:41:28] 2025-06-03 08:26:00,844 | INFO     | . payload setup = 165 s
[2025-06-03 10:41:28] 2025-06-03 08:26:00,844 | INFO     | . stage-in = 0 s
[2025-06-03 10:41:28] 2025-06-03 08:26:00,844 | INFO     | . payload execution = 12949 s
[2025-06-03 10:41:28] 2025-06-03 08:26:00,844 | INFO     | . stage-out = 3 s
[2025-06-03 10:41:28] 2025-06-03 08:26:00,844 | INFO     | . log creation = 1 s
[2025-06-03 10:41:28] 2025-06-03 08:26:00,844 | INFO     | ..............................
[2025-06-03 10:41:28] 2025-06-03 08:26:00,990 | INFO     | 
[2025-06-03 10:41:28] 2025-06-03 08:26:00,991 | INFO     | job summary report
[2025-06-03 10:41:28] 2025-06-03 08:26:00,991 | INFO     | --------------------------------------------------
[2025-06-03 10:41:28] 2025-06-03 08:26:00,991 | INFO     | PanDA job id: 6677386295
[2025-06-03 10:41:28] 2025-06-03 08:26:00,991 | INFO     | task id: 45006595
[2025-06-03 10:41:28] 2025-06-03 08:26:00,991 | INFO     | errors: (none)
[2025-06-03 10:41:28] 2025-06-03 08:26:00,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:41:28] 2025-06-03 08:26:00,991 | INFO     | pilot state: finished 
[2025-06-03 10:41:28] 2025-06-03 08:26:00,991 | INFO     | transexitcode: 0
[2025-06-03 10:41:28] 2025-06-03 08:26:00,991 | INFO     | exeerrorcode: 0
[2025-06-03 10:41:28] 2025-06-03 08:26:00,991 | INFO     | exeerrordiag: 
[2025-06-03 10:41:28] 2025-06-03 08:26:00,991 | INFO     | exitcode: 0
[2025-06-03 10:41:28] 2025-06-03 08:26:00,992 | INFO     | exitmsg: OK
[2025-06-03 10:41:28] 2025-06-03 08:26:00,992 | INFO     | cpuconsumptiontime: 47501 s
[2025-06-03 10:41:28] 2025-06-03 08:26:00,992 | INFO     | nevents: 400
[2025-06-03 10:41:28] 2025-06-03 08:26:00,992 | INFO     | neventsw: 0
[2025-06-03 10:41:28] 2025-06-03 08:26:00,992 | INFO     | pid: 8385
[2025-06-03 10:41:28] 2025-06-03 08:26:00,992 | INFO     | pgrp: 8385
[2025-06-03 10:41:28] 2025-06-03 08:26:00,992 | INFO     | corecount: 8
[2025-06-03 10:41:28] 2025-06-03 08:26:00,992 | INFO     | event service: False
[2025-06-03 10:41:28] 2025-06-03 08:26:00,992 | INFO     | sizes: {0: 2405176, 1: 2405204, 12: 2405204, 23: 2405232, 33: 2405260, 44: 2405316, 55: 2405472, 65: 2405500, 76: 2405528, 87: 2405584, 88: 2405818, 98: 2406126, 1
[2025-06-03 10:41:28] 2025-06-03 08:26:00,992 | INFO     | --------------------------------------------------
[2025-06-03 10:41:28] 2025-06-03 08:26:00,992 | INFO     | 
[2025-06-03 10:41:28] 2025-06-03 08:26:00,993 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2025-06-03 10:41:28] 2025-06-03 08:26:01,504 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,505 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,505 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,505 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,505 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,506 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:41:28] 2025-06-03 08:26:01,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,507 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:41:28] 2025-06-03 08:26:01,507 | INFO     | job 6677386295 has completed (purged errors)
[2025-06-03 10:41:28] 2025-06-03 08:26:01,507 | INFO     | overall cleanup function is called
[2025-06-03 10:41:28] 2025-06-03 08:26:02,515 | INFO     | --- collectZombieJob: --- 10, [8385]
[2025-06-03 10:41:28] 2025-06-03 08:26:02,516 | INFO     | zombie collector waiting for pid 8385
[2025-06-03 10:41:28] 2025-06-03 08:26:02,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:41:28] 2025-06-03 08:26:02,516 | INFO     | collected zombie processes
[2025-06-03 10:41:28] 2025-06-03 08:26:02,516 | INFO     | will attempt to kill all subprocesses of pid=8385
[2025-06-03 10:41:28] 2025-06-03 08:26:02,639 | INFO     | process IDs to be killed: [8385] (in reverse order)
[2025-06-03 10:41:28] 2025-06-03 08:26:03,609 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:41:28] 2025-06-03 08:26:03,609 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:41:28] 2025-06-03 08:26:03,613 | INFO     | did not find any defunct processes belonging to 8385
[2025-06-03 10:41:28] 2025-06-03 08:26:03,616 | INFO     | did not find any defunct processes belonging to 8385
[2025-06-03 10:41:28] 2025-06-03 08:26:03,617 | INFO     | ready for new job
[2025-06-03 10:41:28] 2025-06-03 08:26:03,620 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:41:28] 2025-06-03 08:26:03,622 | INFO     | **************************************
[2025-06-03 10:41:28] 2025-06-03 08:26:03,622 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:41:28] 2025-06-03 08:26:03,623 | INFO     | **************************************
[2025-06-03 10:41:28] 2025-06-03 08:26:03,623 | INFO     | 
[2025-06-03 10:41:28] 2025-06-03 08:26:03,623 | INFO     | pilot is running in a VM
[2025-06-03 10:41:28] 2025-06-03 08:26:03,623 | INFO     | architecture information:
[2025-06-03 10:41:28] 2025-06-03 08:26:03,634 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:41:28] 2025-06-03 08:26:03,969 | INFO     | cat /etc/os-release:
[2025-06-03 10:41:28] NAME="CentOS Linux"
[2025-06-03 10:41:28] VERSION="7 (Core)"
[2025-06-03 10:41:28] ID="centos"
[2025-06-03 10:41:28] ID_LIKE="rhel fedora"
[2025-06-03 10:41:28] VERSION_ID="7"
[2025-06-03 10:41:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:41:28] ANSI_COLOR="0;31"
[2025-06-03 10:41:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:41:28] HOME_URL="https://www.centos.org/"
[2025-06-03 10:41:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:41:28] 
[2025-06-03 10:41:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:41:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:41:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:41:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:41:28] 
[2025-06-03 10:41:28] 2025-06-03 08:26:03,969 | INFO     | **************************************
[2025-06-03 10:41:28] 2025-06-03 08:26:04,473 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2025-06-03 10:41:28] 2025-06-03 08:26:04,751 | INFO     | sufficient remaining disk space (496521707520 B)
[2025-06-03 10:41:28] 2025-06-03 08:26:04,752 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:41:28] 2025-06-03 08:26:04,752 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:41:28] 2025-06-03 08:26:04,752 | INFO     | update_server=False
[2025-06-03 10:41:28] 2025-06-03 08:26:04,752 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:41:28] 2025-06-03 08:26:04,755 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 10:41:28] 2025-06-03 08:26:04,756 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:41:28] 2025-06-03 08:26:04,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:41:28] 2025-06-03 08:26:04,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:41:28] 2025-06-03 08:26:04,850 | INFO     | all payload control threads have been joined
[2025-06-03 10:41:28] 2025-06-03 08:26:05,109 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 10:41:28] 2025-06-03 08:26:05,110 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 10:41:28] 2025-06-03 08:26:05,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:41:28] 2025-06-03 08:26:05,110 | INFO     | will abort loop
[2025-06-03 10:41:28] 2025-06-03 08:26:05,210 | INFO     | all job control threads have been joined
[2025-06-03 10:41:28] 2025-06-03 08:26:05,301 | INFO     | all data control threads have been joined
[2025-06-03 10:41:28] 2025-06-03 08:26:05,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:41:28] 2025-06-03 08:26:05,758 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:05,806 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:05,856 | INFO     | [payload] control thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:05,872 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:05,935 | INFO     | [job] validate thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:06,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:41:28] 2025-06-03 08:26:06,065 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:06,091 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:06,116 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:06,216 | INFO     | [job] control thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:06,242 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:06,307 | INFO     | [data] control thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:06,594 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:06,618 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:07,011 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:07,391 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:07,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:41:28] 2025-06-03 08:26:11,906 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:41:28] 2025-06-03 08:26:12,694 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713123338048)>', '<ExcThread(monitor, started 140712372852480)>']
[2025-06-03 10:41:28] 2025-06-03 08:26:12,803 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:41:28] 2025-06-03 08:26:12,804 | INFO     | [monitor] control thread has ended
[2025-06-03 10:41:28] 2025-06-03 08:26:17,720 | INFO     | all workflow threads have been joined
[2025-06-03 10:41:28] 2025-06-03 08:26:17,720 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:41:28] 2025-06-03 08:26:17,721 | INFO     | traces error code: 0
[2025-06-03 10:41:28] 2025-06-03 08:26:17,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:41:28] 2025-06-03 08:26:18,161 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:41:28] 2025-06-03 08:26:18,256 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:41:28] 2025-06-03 08:26:18,312 [wrapper] pilotpid: 31861
[2025-06-03 10:41:28] 2025-06-03 08:26:18,369 [wrapper] Pilot exit status: 0
[2025-06-03 10:41:28] 2025-06-03 08:26:18,772 [wrapper] pandaids: 6677386295
[2025-06-03 10:41:28] 2025-06-03 08:26:19,693 [wrapper] cleanup supervisor_pilot  7006 31862
[2025-06-03 10:41:28] 2025-06-03 08:26:19,753 [wrapper] Test setup, not cleaning
[2025-06-03 10:41:28] 2025-06-03 08:26:19,883 [wrapper] apfmon messages muted
[2025-06-03 10:41:28] 2025-06-03 08:26:20,003 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:41:28] 2025-06-03 08:26:20,092 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:41:28]  *** Error codes and diagnostics ***
[2025-06-03 10:41:28]     "exeErrorCode": 0,
[2025-06-03 10:41:28]     "exeErrorDiag": "",
[2025-06-03 10:41:28]     "pilotErrorCode": 0,
[2025-06-03 10:41:28]     "pilotErrorDiag": "",
[2025-06-03 10:41:28]  *** Listing of results directory ***
[2025-06-03 10:41:28] total 387228
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:05 queuedata.json
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:07 pilot3.tar.gz
[2025-06-03 10:41:28] -rwx------. 1 boinc boinc     37140 Jun  2 19:07 runpilot2-wrapper.sh
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc       100 Jun  3 06:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:41:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 06:35 run_atlas
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc       105 Jun  3 06:35 job.xml
[2025-06-03 10:41:28] -rw-r--r--. 2 boinc boinc 214963399 Jun  3 06:35 EVNT.45006593._000195.pool.root.1
[2025-06-03 10:41:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:35 start_atlas.sh
[2025-06-03 10:41:28] drwxrwx--x. 2 boinc boinc        68 Jun  3 06:35 shared
[2025-06-03 10:41:28] -rw-r--r--. 2 boinc boinc    508875 Jun  3 06:35 input.tar.gz
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc      6393 Jun  3 06:35 init_data.xml
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc         0 Jun  3 06:35 boinc_lockfile
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc      2520 Jun  3 06:39 pandaJob.out
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc    988073 Jun  3 06:42 agis_schedconf.cvmfs.json
[2025-06-03 10:41:28] drwx------. 4 boinc boinc      4096 Jun  3 06:42 pilot3
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc 174716304 Jun  3 10:23 HITS.45006595._004854.pool.root.1
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc       531 Jun  3 10:23 boinc_task_state.xml
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc      1016 Jun  3 10:24 memory_monitor_summary.json
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc   1603667 Jun  3 10:24 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc    362714 Jun  3 10:24 log.45006595._004854.job.log.tgz.1
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc        95 Jun  3 10:25 pilot_heartbeat.json
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc      7693 Jun  3 10:26 heartbeat.json
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc      4726 Jun  3 10:26 pilotlog.txt
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc   1144677 Jun  3 10:26 log.45006595._004854.job.log.1
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc       357 Jun  3 10:26 output.list
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc       620 Jun  3 10:26 runtime_log
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc   1525760 Jun  3 10:26 result.tar.gz
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc      8673 Jun  3 10:26 runtime_log.err
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc       656 Jun  3 10:26 4nkKDmfoNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5dfKDmEdHsNm.diag
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc      8192 Jun  3 10:41 boinc_mmap_file
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc        28 Jun  3 10:41 wrapper_checkpoint.txt
[2025-06-03 10:41:28] -rw-r--r--. 1 boinc boinc     20513 Jun  3 10:41 stderr.txt
[2025-06-03 10:41:28] HITS file was successfully produced:
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc 174716304 Jun  3 10:23 shared/HITS.pool.root.1
[2025-06-03 10:41:28]  *** Contents of shared directory: ***
[2025-06-03 10:41:28] total 382560
[2025-06-03 10:41:28] -rw-r--r--. 2 boinc boinc 214963399 Jun  3 06:35 ATLAS.root_0
[2025-06-03 10:41:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:35 start_atlas.sh
[2025-06-03 10:41:28] -rw-r--r--. 2 boinc boinc    508875 Jun  3 06:35 input.tar.gz
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc 174716304 Jun  3 10:23 HITS.pool.root.1
[2025-06-03 10:41:28] -rw-------. 1 boinc boinc   1525760 Jun  3 10:26 result.tar.gz
10:41:30 (20089): run_atlas exited; CPU time 47679.128044
10:41:30 (20089): called boinc_finish(0)

</stderr_txt>
]]>

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