Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:21:37 (296889): wrapper (7.7.26015): starting
11:21:37 (296889): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 11:21:37] Arguments: --nthreads 4
[2025-06-04 11:21:37] Threads: 4
[2025-06-04 11:21:37] Checking for CVMFS
[2025-06-04 11:21:37] No cvmfs_config command found, will try listing directly
[2025-06-04 11:21:37] CVMFS is ok
[2025-06-04 11:21:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:21:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:21:37] Further information can be found at the LHC@home message board.
[2025-06-04 11:21:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:21:37] Checking for apptainer binary...
[2025-06-04 11:21:37] which: no apptainer in ((null))
[2025-06-04 11:21:37] apptainer is not installed, using version from CVMFS
[2025-06-04 11:21:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:21:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-04 11:21:37] apptainer works
[2025-06-04 11:21:37] Set ATHENA_PROC_NUMBER=4
[2025-06-04 11:21:37] Set ATHENA_CORE_NUMBER=4
[2025-06-04 11:21:37] Starting ATLAS job with PandaID=6677390683
[2025-06-04 11:21:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:15:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:15:45] 2025-06-04 12:13:04,363 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4776/.job.ad'
[2025-06-04 14:15:45] 2025-06-04 12:13:04,364 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:15:45] 2025-06-04 12:13:04,368 | INFO     | executing command: lscpu
[2025-06-04 14:15:45] 2025-06-04 12:13:04,435 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:15:45] 2025-06-04 12:13:05,943 | INFO     | monitor loop #749: job 0:6677390683 is in state 'finished'
[2025-06-04 14:15:45] 2025-06-04 12:13:05,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:15:45] 2025-06-04 12:13:08,446 | INFO     | monitor loop #750: job 0:6677390683 is in state 'finished'
[2025-06-04 14:15:45] 2025-06-04 12:13:08,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:15:45] 2025-06-04 12:13:08,899 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 14:15:45] 2025-06-04 12:13:08,900 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6677390683/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:15:45] 2025-06-04 12:13:08,901 | INFO     | extracted standard info from prmon json
[2025-06-04 14:15:45] 2025-06-04 12:13:08,901 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:15:45] 2025-06-04 12:13:08,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:15:45] 2025-06-04 12:13:08,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:15:45] 2025-06-04 12:13:08,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:15:45] 2025-06-04 12:13:08,906 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:15:45] 2025-06-04 12:13:08,907 | INFO     | sum of square deviations: 1470248962.0
[2025-06-04 14:15:45] 2025-06-04 12:13:08,908 | INFO     | sum of deviations: -36531626899.500015
[2025-06-04 14:15:45] 2025-06-04 12:13:08,908 | INFO     | mean x: 1749034029.5
[2025-06-04 14:15:45] 2025-06-04 12:13:08,908 | INFO     | mean y: 2410674.363095238
[2025-06-04 14:15:45] 2025-06-04 12:13:08,908 | INFO     | -- intersect: 43461076690.563354
[2025-06-04 14:15:45] 2025-06-04 12:13:08,908 | INFO     | intersect: 43461076690.563354
[2025-06-04 14:15:45] 2025-06-04 12:13:08,909 | INFO     | chi2: 1.7946662236150444
[2025-06-04 14:15:45] 2025-06-04 12:13:08,909 | INFO     | sum of square deviations: 1342841922.0
[2025-06-04 14:15:45] 2025-06-04 12:13:08,910 | INFO     | sum of deviations: -34466980365.0
[2025-06-04 14:15:45] 2025-06-04 12:13:08,910 | INFO     | mean x: 1749033877.0
[2025-06-04 14:15:45] 2025-06-04 12:13:08,911 | INFO     | mean y: 2413146.3312883438
[2025-06-04 14:15:45] 2025-06-04 12:13:08,911 | INFO     | -- intersect: 44895200084.71735
[2025-06-04 14:15:45] 2025-06-04 12:13:08,911 | INFO     | intersect: 44895200084.71735
[2025-06-04 14:15:45] 2025-06-04 12:13:08,911 | INFO     | chi2: 1.789194561735518
[2025-06-04 14:15:45] 2025-06-04 12:13:08,911 | INFO     | current chi2=1.789194561735518 (change=0.304884652506837 %)
[2025-06-04 14:15:45] 2025-06-04 12:13:08,911 | INFO     | right removable region: 162
[2025-06-04 14:15:45] 2025-06-04 12:13:08,912 | INFO     | sum of square deviations: 1342841922.0
[2025-06-04 14:15:45] 2025-06-04 12:13:08,913 | INFO     | sum of deviations: -61601518559.99999
[2025-06-04 14:15:45] 2025-06-04 12:13:08,913 | INFO     | mean x: 1749034182.0
[2025-06-04 14:15:45] 2025-06-04 12:13:08,913 | INFO     | mean y: 2440274.6503067487
[2025-06-04 14:15:45] 2025-06-04 12:13:08,913 | INFO     | -- intersect: 80237619009.67003
[2025-06-04 14:15:45] 2025-06-04 12:13:08,913 | INFO     | intersect: 80237619009.67003
[2025-06-04 14:15:45] 2025-06-04 12:13:08,913 | INFO     | chi2: 0.20159874312733553
[2025-06-04 14:15:45] 2025-06-04 12:13:08,913 | INFO     | current chi2=0.20159874312733553 (change=88.76678345674496 %)
[2025-06-04 14:15:45] 2025-06-04 12:13:08,914 | INFO     | sum of square deviations: 1223016419.5
[2025-06-04 14:15:45] 2025-06-04 12:13:08,915 | INFO     | sum of deviations: -56196237098.50001
[2025-06-04 14:15:45] 2025-06-04 12:13:08,915 | INFO     | mean x: 1749034334.5
[2025-06-04 14:15:45] 2025-06-04 12:13:08,915 | INFO     | mean y: 2433368.4367088606
[2025-06-04 14:15:45] 2025-06-04 12:13:08,915 | INFO     | -- intersect: 80368605553.73103
[2025-06-04 14:15:45] 2025-06-04 12:13:08,915 | INFO     | intersect: 80368605553.73103
[2025-06-04 14:15:45] 2025-06-04 12:13:08,915 | INFO     | chi2: 0.19911200098508042
[2025-06-04 14:15:45] 2025-06-04 12:13:08,916 | INFO     | current chi2=0.19911200098508042 (change=1.2335107370607035 %)
[2025-06-04 14:15:45] 2025-06-04 12:13:08,916 | INFO     | left removable region: 20
[2025-06-04 14:15:45] 2025-06-04 12:13:08,916 | INFO     | sum of square deviations: 887813855.5
[2025-06-04 14:15:45] 2025-06-04 12:13:08,917 | INFO     | sum of deviations: -40580539018.00001
[2025-06-04 14:15:45] 2025-06-04 12:13:08,917 | INFO     | mean x: 1749034456.5
[2025-06-04 14:15:45] 2025-06-04 12:13:08,917 | INFO     | mean y: 2418240.4225352113
[2025-06-04 14:15:45] 2025-06-04 12:13:08,917 | INFO     | -- intersect: 79947961516.32907
[2025-06-04 14:15:45] 2025-06-04 12:13:08,917 | INFO     | intersect: 79947961516.32907
[2025-06-04 14:15:45] 2025-06-04 12:13:08,917 | INFO     | chi2: 0.17641975955066724
[2025-06-04 14:15:45] 2025-06-04 12:13:08,918 | INFO     | -- intersect: 79947961516.32907
[2025-06-04 14:15:45] 2025-06-04 12:13:08,918 | INFO     | current memory leak: -45.71 B/s (using 142 data points, chi2=0.18)
[2025-06-04 14:15:45] 2025-06-04 12:13:08,918 | INFO     | ..............................
[2025-06-04 14:15:45] 2025-06-04 12:13:08,919 | INFO     | . Timing measurements:
[2025-06-04 14:15:45] 2025-06-04 12:13:08,919 | INFO     | . get job = 0 s
[2025-06-04 14:15:45] 2025-06-04 12:13:08,919 | INFO     | . initial setup = 1 s
[2025-06-04 14:15:45] 2025-06-04 12:13:08,919 | INFO     | . payload setup = 7 s
[2025-06-04 14:15:45] 2025-06-04 12:13:08,919 | INFO     | . stage-in = 0 s
[2025-06-04 14:15:45] 2025-06-04 12:13:08,919 | INFO     | . payload execution = 10245 s
[2025-06-04 14:15:45] 2025-06-04 12:13:08,919 | INFO     | . stage-out = 0 s
[2025-06-04 14:15:45] 2025-06-04 12:13:08,919 | INFO     | . log creation = 0 s
[2025-06-04 14:15:45] 2025-06-04 12:13:08,919 | INFO     | ..............................
[2025-06-04 14:15:45] 2025-06-04 12:13:09,296 | INFO     | 
[2025-06-04 14:15:45] 2025-06-04 12:13:09,297 | INFO     | job summary report
[2025-06-04 14:15:45] 2025-06-04 12:13:09,298 | INFO     | --------------------------------------------------
[2025-06-04 14:15:45] 2025-06-04 12:13:09,298 | INFO     | PanDA job id: 6677390683
[2025-06-04 14:15:45] 2025-06-04 12:13:09,298 | INFO     | task id: 45006595
[2025-06-04 14:15:45] 2025-06-04 12:13:09,299 | INFO     | errors: (none)
[2025-06-04 14:15:45] 2025-06-04 12:13:09,299 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:15:45] 2025-06-04 12:13:09,299 | INFO     | pilot state: finished 
[2025-06-04 14:15:45] 2025-06-04 12:13:09,299 | INFO     | transexitcode: 0
[2025-06-04 14:15:45] 2025-06-04 12:13:09,299 | INFO     | exeerrorcode: 0
[2025-06-04 14:15:45] 2025-06-04 12:13:09,299 | INFO     | exeerrordiag: 
[2025-06-04 14:15:45] 2025-06-04 12:13:09,299 | INFO     | exitcode: 0
[2025-06-04 14:15:45] 2025-06-04 12:13:09,299 | INFO     | exitmsg: OK
[2025-06-04 14:15:45] 2025-06-04 12:13:09,299 | INFO     | cpuconsumptiontime: 39292 s
[2025-06-04 14:15:45] 2025-06-04 12:13:09,299 | INFO     | nevents: 400
[2025-06-04 14:15:45] 2025-06-04 12:13:09,299 | INFO     | neventsw: 0
[2025-06-04 14:15:45] 2025-06-04 12:13:09,299 | INFO     | pid: 309686
[2025-06-04 14:15:45] 2025-06-04 12:13:09,300 | INFO     | pgrp: 309686
[2025-06-04 14:15:45] 2025-06-04 12:13:09,300 | INFO     | corecount: 4
[2025-06-04 14:15:45] 2025-06-04 12:13:09,300 | INFO     | event service: False
[2025-06-04 14:15:45] 2025-06-04 12:13:09,300 | INFO     | sizes: {0: 2405017, 1: 2405216, 5: 2405422, 12: 2405478, 10257: 2434019, 10259: 2442982, 10260: 2443166, 10265: 2443336}
[2025-06-04 14:15:45] 2025-06-04 12:13:09,300 | INFO     | --------------------------------------------------
[2025-06-04 14:15:45] 2025-06-04 12:13:09,300 | INFO     | 
[2025-06-04 14:15:45] 2025-06-04 12:13:09,300 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-06-04 14:15:45] 2025-06-04 12:13:09,322 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,323 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,323 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,323 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,323 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,323 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,323 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,323 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,324 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,324 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,324 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,324 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,324 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,324 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,324 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,324 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:15:45] 2025-06-04 12:13:09,324 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,324 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:15:45] 2025-06-04 12:13:09,325 | INFO     | job 6677390683 has completed (purged errors)
[2025-06-04 14:15:45] 2025-06-04 12:13:09,325 | INFO     | overall cleanup function is called
[2025-06-04 14:15:45] 2025-06-04 12:13:10,332 | INFO     | --- collectZombieJob: --- 10, [309686]
[2025-06-04 14:15:45] 2025-06-04 12:13:10,333 | INFO     | zombie collector waiting for pid 309686
[2025-06-04 14:15:45] 2025-06-04 12:13:10,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:15:45] 2025-06-04 12:13:10,333 | INFO     | collected zombie processes
[2025-06-04 14:15:45] 2025-06-04 12:13:10,333 | INFO     | will attempt to kill all subprocesses of pid=309686
[2025-06-04 14:15:45] 2025-06-04 12:13:10,702 | INFO     | process IDs to be killed: [309686] (in reverse order)
[2025-06-04 14:15:45] 2025-06-04 12:13:10,821 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:15:45] 2025-06-04 12:13:10,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:15:45] 2025-06-04 12:13:10,834 | INFO     | did not find any defunct processes belonging to 309686
[2025-06-04 14:15:45] 2025-06-04 12:13:10,845 | INFO     | did not find any defunct processes belonging to 309686
[2025-06-04 14:15:45] 2025-06-04 12:13:10,845 | INFO     | ready for new job
[2025-06-04 14:15:45] 2025-06-04 12:13:10,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:15:45] 2025-06-04 12:13:10,847 | INFO     | **************************************
[2025-06-04 14:15:45] 2025-06-04 12:13:10,848 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:15:45] 2025-06-04 12:13:10,848 | INFO     | **************************************
[2025-06-04 14:15:45] 2025-06-04 12:13:10,848 | INFO     | 
[2025-06-04 14:15:45] 2025-06-04 12:13:10,852 | INFO     | architecture information:
[2025-06-04 14:15:45] 2025-06-04 12:13:10,852 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:15:45] 2025-06-04 12:13:10,869 | INFO     | cat /etc/os-release:
[2025-06-04 14:15:45] NAME="CentOS Linux"
[2025-06-04 14:15:45] VERSION="7 (Core)"
[2025-06-04 14:15:45] ID="centos"
[2025-06-04 14:15:45] ID_LIKE="rhel fedora"
[2025-06-04 14:15:45] VERSION_ID="7"
[2025-06-04 14:15:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:15:45] ANSI_COLOR="0;31"
[2025-06-04 14:15:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:15:45] HOME_URL="https://www.centos.org/"
[2025-06-04 14:15:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:15:45] 
[2025-06-04 14:15:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:15:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:15:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:15:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:15:45] 
[2025-06-04 14:15:45] 2025-06-04 12:13:10,870 | INFO     | **************************************
[2025-06-04 14:15:45] 2025-06-04 12:13:11,373 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-06-04 14:15:45] 2025-06-04 12:13:11,391 | INFO     | sufficient remaining disk space (649481682944 B)
[2025-06-04 14:15:45] 2025-06-04 12:13:11,391 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:15:45] 2025-06-04 12:13:11,391 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:15:45] 2025-06-04 12:13:11,391 | INFO     | update_server=False
[2025-06-04 14:15:45] 2025-06-04 12:13:11,391 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:15:45] 2025-06-04 12:13:11,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:15:45] 2025-06-04 12:13:11,418 | INFO     | all data control threads have been joined
[2025-06-04 14:15:45] 2025-06-04 12:13:11,884 | INFO     | all payload control threads have been joined
[2025-06-04 14:15:45] 2025-06-04 12:13:11,954 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:15:45] 2025-06-04 12:13:11,955 | INFO     | aborting loop
[2025-06-04 14:15:45] 2025-06-04 12:13:12,266 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:15:45] 2025-06-04 12:13:12,267 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:15:45] 2025-06-04 12:13:12,267 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:15:45] 2025-06-04 12:13:12,392 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:12,423 | INFO     | [data] control thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:12,676 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:12,684 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:12,689 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:12,713 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:12,821 | INFO     | all job control threads have been joined
[2025-06-04 14:15:45] 2025-06-04 12:13:12,889 | INFO     | [payload] control thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:12,948 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:12,960 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:13,398 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:13,554 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:13,557 | INFO     | [job] validate thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:13,826 | INFO     | [job] control thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:13,839 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:14,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:15:45] 2025-06-04 12:13:14,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:15:45] 2025-06-04 12:13:15,053 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:18,874 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:15:45] 2025-06-04 12:13:19,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22912538904384)>', '<ExcThread(monitor, started 22912234931968)>']
[2025-06-04 14:15:45] 2025-06-04 12:13:19,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:15:45] 2025-06-04 12:13:19,302 | INFO     | [monitor] control thread has ended
[2025-06-04 14:15:45] 2025-06-04 12:13:24,190 | INFO     | all workflow threads have been joined
[2025-06-04 14:15:45] 2025-06-04 12:13:24,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:15:45] 2025-06-04 12:13:24,191 | INFO     | traces error code: 0
[2025-06-04 14:15:45] 2025-06-04 12:13:24,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:15:45] 2025-06-04 12:13:24,384 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:15:45] 2025-06-04 12:13:24,388 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:15:45] 2025-06-04 12:13:24,390 [wrapper] pilotpid: 300554
[2025-06-04 14:15:45] 2025-06-04 12:13:24,393 [wrapper] Pilot exit status: 0
[2025-06-04 14:15:45] 2025-06-04 12:13:24,404 [wrapper] pandaids: 6677390683
[2025-06-04 14:15:45] 2025-06-04 12:13:24,484 [wrapper] cleanup supervisor_pilot  586368 300555
[2025-06-04 14:15:45] 2025-06-04 12:13:24,486 [wrapper] Test setup, not cleaning
[2025-06-04 14:15:45] 2025-06-04 12:13:24,490 [wrapper] apfmon messages muted
[2025-06-04 14:15:45] 2025-06-04 12:13:24,492 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:15:45] 2025-06-04 12:13:24,495 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:15:45]  *** Error codes and diagnostics ***
[2025-06-04 14:15:45]     "exeErrorCode": 0,
[2025-06-04 14:15:45]     "exeErrorDiag": "",
[2025-06-04 14:15:45]     "pilotErrorCode": 0,
[2025-06-04 14:15:45]     "pilotErrorDiag": "",
[2025-06-04 14:15:45]  *** Listing of results directory ***
[2025-06-04 14:15:45] total 389020
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc      5111 Jun  2 20:05 queuedata.json
[2025-06-04 14:15:45] -rwx------ 1 boinc boinc     37140 Jun  2 20:06 runpilot2-wrapper.sh
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:15:45] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:21 run_atlas
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:21 job.xml
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc      6632 Jun  4 11:21 init_data.xml
[2025-06-04 14:15:45] -rw-r--r-- 2 boinc boinc 216711123 Jun  4 11:21 EVNT.45006593._000271.pool.root.1
[2025-06-04 14:15:45] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:21 start_atlas.sh
[2025-06-04 14:15:45] drwxrwx--x 2 boinc boinc      4096 Jun  4 11:21 shared
[2025-06-04 14:15:45] -rw-r--r-- 2 boinc boinc    508877 Jun  4 11:21 input.tar.gz
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:21 boinc_lockfile
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc      2521 Jun  4 11:21 pandaJob.out
[2025-06-04 14:15:45] -rw------- 1 boinc boinc    986766 Jun  4 11:21 agis_schedconf.cvmfs.json
[2025-06-04 14:15:45] -rw------- 1 boinc boinc   1603667 Jun  4 11:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:15:45] drwx------ 4 boinc boinc      4096 Jun  4 11:21 pilot3
[2025-06-04 14:15:45] -rw------- 1 boinc boinc 175265286 Jun  4 14:12 HITS.45006595._006771.pool.root.1
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc       528 Jun  4 14:12 boinc_task_state.xml
[2025-06-04 14:15:45] -rw------- 1 boinc boinc        95 Jun  4 14:12 pilot_heartbeat.json
[2025-06-04 14:15:45] -rw------- 1 boinc boinc      1035 Jun  4 14:12 memory_monitor_summary.json
[2025-06-04 14:15:45] -rw------- 1 boinc boinc    308368 Jun  4 14:13 log.45006595._006771.job.log.tgz.1
[2025-06-04 14:15:45] -rw------- 1 boinc boinc      7728 Jun  4 14:13 heartbeat.json
[2025-06-04 14:15:45] -rw------- 1 boinc boinc      4363 Jun  4 14:13 pilotlog.txt
[2025-06-04 14:15:45] -rw------- 1 boinc boinc    963969 Jun  4 14:13 log.45006595._006771.job.log.1
[2025-06-04 14:15:45] -rw------- 1 boinc boinc       357 Jun  4 14:13 output.list
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc       620 Jun  4 14:13 runtime_log
[2025-06-04 14:15:45] -rw------- 1 boinc boinc   1290240 Jun  4 14:13 result.tar.gz
[2025-06-04 14:15:45] -rw------- 1 boinc boinc       666 Jun  4 14:13 SDpNDmujOg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPvfKDmAb4C8m.diag
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc      9026 Jun  4 14:13 runtime_log.err
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc        26 Jun  4 14:15 wrapper_checkpoint.txt
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc      8192 Jun  4 14:15 boinc_mmap_file
[2025-06-04 14:15:45] -rw-r--r-- 1 boinc boinc     20954 Jun  4 14:15 stderr.txt
[2025-06-04 14:15:45] HITS file was successfully produced:
[2025-06-04 14:15:45] -rw------- 1 boinc boinc 175265286 Jun  4 14:12 shared/HITS.pool.root.1
[2025-06-04 14:15:45]  *** Contents of shared directory: ***
[2025-06-04 14:15:45] total 384576
[2025-06-04 14:15:45] -rw-r--r-- 2 boinc boinc 216711123 Jun  4 11:21 ATLAS.root_0
[2025-06-04 14:15:45] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:21 start_atlas.sh
[2025-06-04 14:15:45] -rw-r--r-- 2 boinc boinc    508877 Jun  4 11:21 input.tar.gz
[2025-06-04 14:15:45] -rw------- 1 boinc boinc 175265286 Jun  4 14:12 HITS.pool.root.1
[2025-06-04 14:15:45] -rw------- 1 boinc boinc   1290240 Jun  4 14:13 result.tar.gz
14:15:47 (296889): run_atlas exited; CPU time 39669.292026
14:15:47 (296889): called boinc_finish(0)

</stderr_txt>
]]>

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