Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:04:16 (24467): wrapper (7.7.26015): starting
05:04:16 (24467): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:04:16] Arguments: --nthreads 8
[2025-06-03 05:04:16] Threads: 8
[2025-06-03 05:04:16] Checking for CVMFS
[2025-06-03 05:04:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:04:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:04:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:04:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:04:17] 2.11.2.0 14868 31331 101240 146724 3 201 24809861 25165825 4097 130560 0 15819832 99.768 19318602 2586 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 05:04:17] CVMFS is ok
[2025-06-03 05:04:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:04:17] Checking for apptainer binary...
[2025-06-03 05:04:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:04:17] Running /usr/bin/apptainer --version
[2025-06-03 05:04:17] apptainer version 1.3.2-1.el7
[2025-06-03 05:04:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 05:04:18] cg-vwn478.simple-grid.lan
[2025-06-03 05:04:18] apptainer works
[2025-06-03 05:04:19] Set ATHENA_PROC_NUMBER=8
[2025-06-03 05:04:19] Set ATHENA_CORE_NUMBER=8
[2025-06-03 05:04:19] Starting ATLAS job with PandaID=6677394164
[2025-06-03 05:04:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:49:52]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:49:52] 2025-06-03 06:15:45,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:49:52] 2025-06-03 06:15:45,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:49:52] 2025-06-03 06:15:45,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:49:52] 2025-06-03 06:15:45,791 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:49:52] 2025-06-03 06:15:45,792 | INFO     | sum of square deviations: 1995283922.5
[2025-06-03 08:49:52] 2025-06-03 06:15:45,793 | INFO     | sum of deviations: -36586387941.5
[2025-06-03 08:49:52] 2025-06-03 06:15:45,793 | INFO     | mean x: 1748925584.5
[2025-06-03 08:49:52] 2025-06-03 06:15:45,793 | INFO     | mean y: 2531487.1559139783
[2025-06-03 08:49:52] 2025-06-03 06:15:45,793 | INFO     | -- intersect: 32071586519.26333
[2025-06-03 08:49:52] 2025-06-03 06:15:45,793 | INFO     | intersect: 32071586519.26333
[2025-06-03 08:49:52] 2025-06-03 06:15:45,799 | INFO     | chi2: 2.690024358843039
[2025-06-03 08:49:52] 2025-06-03 06:15:45,800 | INFO     | sum of square deviations: 1838657730.0
[2025-06-03 08:49:52] 2025-06-03 06:15:45,801 | INFO     | sum of deviations: -22636780909.00001
[2025-06-03 08:49:52] 2025-06-03 06:15:45,801 | INFO     | mean x: 1748925432.0
[2025-06-03 08:49:52] 2025-06-03 06:15:45,801 | INFO     | mean y: 2544811.1049723756
[2025-06-03 08:49:52] 2025-06-03 06:15:45,801 | INFO     | -- intersect: 21534579395.030605
[2025-06-03 08:49:52] 2025-06-03 06:15:45,801 | INFO     | intersect: 21534579395.030605
[2025-06-03 08:49:52] 2025-06-03 06:15:45,802 | INFO     | chi2: 1.9278550021253895
[2025-06-03 08:49:52] 2025-06-03 06:15:45,802 | INFO     | current chi2=1.9278550021253895 (change=28.33317676890678 %)
[2025-06-03 08:49:52] 2025-06-03 06:15:45,802 | INFO     | sum of square deviations: 1690450300.0
[2025-06-03 08:49:52] 2025-06-03 06:15:45,803 | INFO     | sum of deviations: -21058599675.5
[2025-06-03 08:49:52] 2025-06-03 06:15:45,804 | INFO     | mean x: 1748925279.5
[2025-06-03 08:49:52] 2025-06-03 06:15:45,804 | INFO     | mean y: 2546435.4261363638
[2025-06-03 08:49:52] 2025-06-03 06:15:45,804 | INFO     | -- intersect: 21789591770.833187
[2025-06-03 08:49:52] 2025-06-03 06:15:45,804 | INFO     | intersect: 21789591770.833187
[2025-06-03 08:49:52] 2025-06-03 06:15:45,804 | INFO     | chi2: 1.927079030774285
[2025-06-03 08:49:52] 2025-06-03 06:15:45,805 | INFO     | current chi2=1.927079030774285 (change=0.0402505038111751 %)
[2025-06-03 08:49:52] 2025-06-03 06:15:45,805 | INFO     | right removable region: 175
[2025-06-03 08:49:52] 2025-06-03 06:15:45,805 | INFO     | sum of square deviations: 1838657730.0
[2025-06-03 08:49:52] 2025-06-03 06:15:45,806 | INFO     | sum of deviations: -69289441280.0
[2025-06-03 08:49:52] 2025-06-03 06:15:45,806 | INFO     | mean x: 1748925737.0
[2025-06-03 08:49:52] 2025-06-03 06:15:45,806 | INFO     | mean y: 2562996.2209944753
[2025-06-03 08:49:52] 2025-06-03 06:15:45,806 | INFO     | -- intersect: 65910472434.560135
[2025-06-03 08:49:52] 2025-06-03 06:15:45,807 | INFO     | intersect: 65910472434.560135
[2025-06-03 08:49:52] 2025-06-03 06:15:45,807 | INFO     | chi2: 0.9777583761838391
[2025-06-03 08:49:52] 2025-06-03 06:15:45,807 | INFO     | current chi2=0.9777583761838391 (change=63.652434113854405 %)
[2025-06-03 08:49:52] 2025-06-03 06:15:45,807 | INFO     | sum of square deviations: 1690450300.0
[2025-06-03 08:49:52] 2025-06-03 06:15:45,815 | INFO     | sum of deviations: -67482727542.0
[2025-06-03 08:49:52] 2025-06-03 06:15:45,815 | INFO     | mean x: 1748925889.5
[2025-06-03 08:49:52] 2025-06-03 06:15:45,815 | INFO     | mean y: 2561096.25
[2025-06-03 08:49:52] 2025-06-03 06:15:45,815 | INFO     | -- intersect: 69819632495.67445
[2025-06-03 08:49:52] 2025-06-03 06:15:45,815 | INFO     | intersect: 69819632495.67445
[2025-06-03 08:49:52] 2025-06-03 06:15:45,815 | INFO     | chi2: 0.9613517223080887
[2025-06-03 08:49:52] 2025-06-03 06:15:45,816 | INFO     | current chi2=0.9613517223080887 (change=1.6779865328062975 %)
[2025-06-03 08:49:52] 2025-06-03 06:15:45,816 | INFO     | left removable region: 20
[2025-06-03 08:49:52] 2025-06-03 06:15:45,816 | INFO     | sum of square deviations: 1154663510.0
[2025-06-03 08:49:52] 2025-06-03 06:15:45,817 | INFO     | sum of deviations: -42382524523.999985
[2025-06-03 08:49:52] 2025-06-03 06:15:45,817 | INFO     | mean x: 1748925859.0
[2025-06-03 08:49:52] 2025-06-03 06:15:45,817 | INFO     | mean y: 2568583.625806452
[2025-06-03 08:49:52] 2025-06-03 06:15:45,817 | INFO     | -- intersect: 64197801625.783035
[2025-06-03 08:49:52] 2025-06-03 06:15:45,817 | INFO     | intersect: 64197801625.783035
[2025-06-03 08:49:52] 2025-06-03 06:15:45,818 | INFO     | chi2: 0.1569815365739125
[2025-06-03 08:49:52] 2025-06-03 06:15:45,818 | INFO     | -- intersect: 64197801625.783035
[2025-06-03 08:49:52] 2025-06-03 06:15:45,818 | INFO     | current memory leak: -36.71 B/s (using 155 data points, chi2=0.16)
[2025-06-03 08:49:52] 2025-06-03 06:15:45,819 | INFO     | ..............................
[2025-06-03 08:49:52] 2025-06-03 06:15:45,819 | INFO     | . Timing measurements:
[2025-06-03 08:49:52] 2025-06-03 06:15:45,819 | INFO     | . get job = 0 s
[2025-06-03 08:49:52] 2025-06-03 06:15:45,819 | INFO     | . initial setup = 2 s
[2025-06-03 08:49:52] 2025-06-03 06:15:45,819 | INFO     | . payload setup = 13 s
[2025-06-03 08:49:52] 2025-06-03 06:15:45,819 | INFO     | . stage-in = 0 s
[2025-06-03 08:49:52] 2025-06-03 06:15:45,819 | INFO     | . payload execution = 11325 s
[2025-06-03 08:49:52] 2025-06-03 06:15:45,819 | INFO     | . stage-out = 4 s
[2025-06-03 08:49:52] 2025-06-03 06:15:45,820 | INFO     | . log creation = 1 s
[2025-06-03 08:49:52] 2025-06-03 06:15:45,820 | INFO     | ..............................
[2025-06-03 08:49:52] 2025-06-03 06:15:46,391 | INFO     | 
[2025-06-03 08:49:52] 2025-06-03 06:15:46,391 | INFO     | job summary report
[2025-06-03 08:49:52] 2025-06-03 06:15:46,391 | INFO     | --------------------------------------------------
[2025-06-03 08:49:52] 2025-06-03 06:15:46,391 | INFO     | PanDA job id: 6677394164
[2025-06-03 08:49:52] 2025-06-03 06:15:46,391 | INFO     | task id: 45006595
[2025-06-03 08:49:52] 2025-06-03 06:15:46,391 | INFO     | errors: (none)
[2025-06-03 08:49:52] 2025-06-03 06:15:46,391 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | pilot state: finished 
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | transexitcode: 0
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | exeerrorcode: 0
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | exeerrordiag: 
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | exitcode: 0
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | exitmsg: OK
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | cpuconsumptiontime: 43205 s
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | nevents: 400
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | neventsw: 0
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | pid: 4587
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | pgrp: 4587
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | corecount: 8
[2025-06-03 08:49:52] 2025-06-03 06:15:46,392 | INFO     | event service: False
[2025-06-03 08:49:52] 2025-06-03 06:15:46,393 | INFO     | sizes: {0: 2404349, 1: 2405205, 2: 2405233, 10: 2405439, 12: 2405467, 11342: 2434454, 11347: 2443395, 11349: 2443479, 11444: 2443649}
[2025-06-03 08:49:52] 2025-06-03 06:15:46,393 | INFO     | --------------------------------------------------
[2025-06-03 08:49:52] 2025-06-03 06:15:46,393 | INFO     | 
[2025-06-03 08:49:52] 2025-06-03 06:15:46,393 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-03 08:49:52] 2025-06-03 06:15:46,891 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,891 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,892 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,892 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,892 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,892 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,892 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,892 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,892 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,892 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,892 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,893 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,893 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,893 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,893 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,893 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,893 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,893 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:49:52] 2025-06-03 06:15:46,893 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,893 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:49:52] 2025-06-03 06:15:46,894 | INFO     | job 6677394164 has completed (purged errors)
[2025-06-03 08:49:52] 2025-06-03 06:15:46,894 | INFO     | overall cleanup function is called
[2025-06-03 08:49:52] 2025-06-03 06:15:47,901 | INFO     | --- collectZombieJob: --- 10, [4587]
[2025-06-03 08:49:52] 2025-06-03 06:15:47,902 | INFO     | zombie collector waiting for pid 4587
[2025-06-03 08:49:52] 2025-06-03 06:15:47,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:49:52] 2025-06-03 06:15:47,902 | INFO     | collected zombie processes
[2025-06-03 08:49:52] 2025-06-03 06:15:47,902 | INFO     | will attempt to kill all subprocesses of pid=4587
[2025-06-03 08:49:52] 2025-06-03 06:15:48,023 | INFO     | process IDs to be killed: [4587] (in reverse order)
[2025-06-03 08:49:52] 2025-06-03 06:15:48,207 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:49:52] 2025-06-03 06:15:48,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:49:52] 2025-06-03 06:15:48,211 | INFO     | did not find any defunct processes belonging to 4587
[2025-06-03 08:49:52] 2025-06-03 06:15:48,213 | INFO     | did not find any defunct processes belonging to 4587
[2025-06-03 08:49:52] 2025-06-03 06:15:48,214 | INFO     | ready for new job
[2025-06-03 08:49:52] 2025-06-03 06:15:48,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:49:52] 2025-06-03 06:15:48,215 | INFO     | **************************************
[2025-06-03 08:49:52] 2025-06-03 06:15:48,216 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:49:52] 2025-06-03 06:15:48,216 | INFO     | **************************************
[2025-06-03 08:49:52] 2025-06-03 06:15:48,216 | INFO     | 
[2025-06-03 08:49:52] 2025-06-03 06:15:48,216 | INFO     | pilot is running in a VM
[2025-06-03 08:49:52] 2025-06-03 06:15:48,217 | INFO     | architecture information:
[2025-06-03 08:49:52] 2025-06-03 06:15:48,229 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:49:52] 2025-06-03 06:15:48,399 | INFO     | cat /etc/os-release:
[2025-06-03 08:49:52] NAME="CentOS Linux"
[2025-06-03 08:49:52] VERSION="7 (Core)"
[2025-06-03 08:49:52] ID="centos"
[2025-06-03 08:49:52] ID_LIKE="rhel fedora"
[2025-06-03 08:49:52] VERSION_ID="7"
[2025-06-03 08:49:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:49:52] ANSI_COLOR="0;31"
[2025-06-03 08:49:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:49:52] HOME_URL="https://www.centos.org/"
[2025-06-03 08:49:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:49:52] 
[2025-06-03 08:49:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:49:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:49:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:49:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:49:52] 
[2025-06-03 08:49:52] 2025-06-03 06:15:48,399 | INFO     | **************************************
[2025-06-03 08:49:52] 2025-06-03 06:15:48,903 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-03 08:49:52] 2025-06-03 06:15:49,014 | INFO     | sufficient remaining disk space (496774414336 B)
[2025-06-03 08:49:52] 2025-06-03 06:15:49,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:49:52] 2025-06-03 06:15:49,015 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:49:52] 2025-06-03 06:15:49,015 | INFO     | update_server=False
[2025-06-03 08:49:52] 2025-06-03 06:15:49,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:49:52] 2025-06-03 06:15:49,015 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 08:49:52] 2025-06-03 06:15:49,015 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:49:52] 2025-06-03 06:15:49,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:49:52] 2025-06-03 06:15:49,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:49:52] 2025-06-03 06:15:49,041 | INFO     | all job control threads have been joined
[2025-06-03 08:49:52] 2025-06-03 06:15:49,125 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 08:49:52] 2025-06-03 06:15:49,125 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 08:49:52] 2025-06-03 06:15:49,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:49:52] 2025-06-03 06:15:49,125 | INFO     | will abort loop
[2025-06-03 08:49:52] 2025-06-03 06:15:49,770 | INFO     | all data control threads have been joined
[2025-06-03 08:49:52] 2025-06-03 06:15:50,021 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:50,047 | INFO     | [job] control thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:50,059 | INFO     | all payload control threads have been joined
[2025-06-03 08:49:52] 2025-06-03 06:15:50,089 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:50,132 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:50,285 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:50,342 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:50,451 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:50,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:49:52] 2025-06-03 06:15:50,742 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:50,777 | INFO     | [data] control thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:50,829 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:50,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:49:52] 2025-06-03 06:15:51,065 | INFO     | [payload] control thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:51,171 | INFO     | [job] validate thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:51,292 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:52,001 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:52,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:49:52] 2025-06-03 06:15:52,470 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:56,423 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:49:52] 2025-06-03 06:15:58,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140533053417280)>', '<ExcThread(monitor, started 140531866793728)>']
[2025-06-03 08:49:52] 2025-06-03 06:15:59,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:49:52] 2025-06-03 06:15:59,075 | INFO     | [monitor] control thread has ended
[2025-06-03 08:49:52] 2025-06-03 06:16:03,104 | INFO     | all workflow threads have been joined
[2025-06-03 08:49:52] 2025-06-03 06:16:03,104 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:49:52] 2025-06-03 06:16:03,105 | INFO     | traces error code: 0
[2025-06-03 08:49:52] 2025-06-03 06:16:03,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:49:52] 2025-06-03 06:16:03,624 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:49:52] 2025-06-03 06:16:03,721 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:49:52] 2025-06-03 06:16:03,828 [wrapper] pilotpid: 28434
[2025-06-03 08:49:52] 2025-06-03 06:16:03,943 [wrapper] Pilot exit status: 0
[2025-06-03 08:49:52] 2025-06-03 06:16:04,323 [wrapper] pandaids: 6677394164
[2025-06-03 08:49:52] 2025-06-03 06:16:04,880 [wrapper] cleanup supervisor_pilot  6803 28435
[2025-06-03 08:49:52] 2025-06-03 06:16:04,993 [wrapper] Test setup, not cleaning
[2025-06-03 08:49:52] 2025-06-03 06:16:05,113 [wrapper] apfmon messages muted
[2025-06-03 08:49:52] 2025-06-03 06:16:05,228 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:49:52] 2025-06-03 06:16:05,324 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:49:52]  *** Error codes and diagnostics ***
[2025-06-03 08:49:52]     "exeErrorCode": 0,
[2025-06-03 08:49:52]     "exeErrorDiag": "",
[2025-06-03 08:49:52]     "pilotErrorCode": 0,
[2025-06-03 08:49:52]     "pilotErrorDiag": "",
[2025-06-03 08:49:52]  *** Listing of results directory ***
[2025-06-03 08:49:52] total 384788
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:18 queuedata.json
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:18 pilot3.tar.gz
[2025-06-03 08:49:52] -rwx------. 1 boinc boinc     37140 Jun  2 21:18 runpilot2-wrapper.sh
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc       100 Jun  3 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:49:52] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 05:04 run_atlas
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc       105 Jun  3 05:04 job.xml
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc      6392 Jun  3 05:04 init_data.xml
[2025-06-03 08:49:52] -rw-r--r--. 2 boinc boinc 213762410 Jun  3 05:04 EVNT.45006593._000364.pool.root.1
[2025-06-03 08:49:52] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:04 start_atlas.sh
[2025-06-03 08:49:52] drwxrwx--x. 2 boinc boinc        68 Jun  3 05:04 shared
[2025-06-03 08:49:52] -rw-r--r--. 2 boinc boinc    508875 Jun  3 05:04 input.tar.gz
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc         0 Jun  3 05:04 boinc_lockfile
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc      2521 Jun  3 05:04 pandaJob.out
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc    988073 Jun  3 05:04 agis_schedconf.cvmfs.json
[2025-06-03 08:49:52] drwx------. 4 boinc boinc      4096 Jun  3 05:04 pilot3
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc 173701810 Jun  3 08:12 HITS.45006595._009092.pool.root.1
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc       531 Jun  3 08:13 boinc_task_state.xml
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc      1017 Jun  3 08:14 memory_monitor_summary.json
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc   1603667 Jun  3 08:14 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc    365961 Jun  3 08:14 log.45006595._009092.job.log.tgz.1
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc        95 Jun  3 08:15 pilot_heartbeat.json
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc      7694 Jun  3 08:15 heartbeat.json
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc      4725 Jun  3 08:16 pilotlog.txt
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc   1001679 Jun  3 08:16 log.45006595._009092.job.log.1
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc       357 Jun  3 08:16 output.list
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc       620 Jun  3 08:16 runtime_log
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc   1382400 Jun  3 08:16 result.tar.gz
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc      8659 Jun  3 08:16 runtime_log.err
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc       656 Jun  3 08:16 Q0GNDmArPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHHgKDmXNW0on.diag
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc      8192 Jun  3 08:49 boinc_mmap_file
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc        28 Jun  3 08:49 wrapper_checkpoint.txt
[2025-06-03 08:49:52] -rw-r--r--. 1 boinc boinc     20487 Jun  3 08:49 stderr.txt
[2025-06-03 08:49:52] HITS file was successfully produced:
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc 173701810 Jun  3 08:12 shared/HITS.pool.root.1
[2025-06-03 08:49:52]  *** Contents of shared directory: ***
[2025-06-03 08:49:52] total 380256
[2025-06-03 08:49:52] -rw-r--r--. 2 boinc boinc 213762410 Jun  3 05:04 ATLAS.root_0
[2025-06-03 08:49:52] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:04 start_atlas.sh
[2025-06-03 08:49:52] -rw-r--r--. 2 boinc boinc    508875 Jun  3 05:04 input.tar.gz
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc 173701810 Jun  3 08:12 HITS.pool.root.1
[2025-06-03 08:49:52] -rw-------. 1 boinc boinc   1382400 Jun  3 08:16 result.tar.gz
08:49:54 (24467): run_atlas exited; CPU time 43343.475902
08:49:54 (24467): called boinc_finish(0)

</stderr_txt>
]]>

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