Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:41:52 (3632530): wrapper (7.7.26015): starting
02:41:52 (3632530): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 02:41:52] Arguments: --nthreads 4
[2025-06-04 02:41:52] Threads: 4
[2025-06-04 02:41:52] Checking for CVMFS
[2025-06-04 02:41:52] No cvmfs_config command found, will try listing directly
[2025-06-04 02:41:52] CVMFS is ok
[2025-06-04 02:41:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:41:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:41:52] Further information can be found at the LHC@home message board.
[2025-06-04 02:41:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:41:52] Checking for apptainer binary...
[2025-06-04 02:41:52] which: no apptainer in ((null))
[2025-06-04 02:41:52] apptainer is not installed, using version from CVMFS
[2025-06-04 02:41:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:41:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-04 02:41:52] apptainer works
[2025-06-04 02:41:52] Set ATHENA_PROC_NUMBER=4
[2025-06-04 02:41:52] Set ATHENA_CORE_NUMBER=4
[2025-06-04 02:41:52] Starting ATLAS job with PandaID=6677390649
[2025-06-04 02:41:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:41:22]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:41:22] 2025-06-04 03:33:55,113 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6677390649/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:41:22] 2025-06-04 03:33:55,114 | INFO     | extracted standard info from prmon json
[2025-06-04 05:41:22] 2025-06-04 03:33:55,114 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:41:22] 2025-06-04 03:33:55,114 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:41:22] 2025-06-04 03:33:55,115 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:41:22] 2025-06-04 03:33:55,115 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:41:22] 2025-06-04 03:33:55,118 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:41:22] 2025-06-04 03:33:55,119 | INFO     | sum of square deviations: 1496660620.0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,120 | INFO     | sum of deviations: -9297445722.999996
[2025-06-04 05:41:22] 2025-06-04 03:33:55,120 | INFO     | mean x: 1749002875.0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,120 | INFO     | mean y: 2324000.5443786983
[2025-06-04 05:41:22] 2025-06-04 03:33:55,120 | INFO     | -- intersect: 10867351838.10681
[2025-06-04 05:41:22] 2025-06-04 03:33:55,120 | INFO     | intersect: 10867351838.10681
[2025-06-04 05:41:22] 2025-06-04 03:33:55,121 | INFO     | chi2: 2.3117370515090094
[2025-06-04 05:41:22] 2025-06-04 03:33:55,121 | INFO     | sum of square deviations: 1367709365.0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,122 | INFO     | sum of deviations: 1922553042.999996
[2025-06-04 05:41:22] 2025-06-04 03:33:55,122 | INFO     | mean x: 1749002722.5
[2025-06-04 05:41:22] 2025-06-04 03:33:55,122 | INFO     | mean y: 2336963.7804878047
[2025-06-04 05:41:22] 2025-06-04 03:33:55,123 | INFO     | -- intersect: -2456190112.5166407
[2025-06-04 05:41:22] 2025-06-04 03:33:55,123 | INFO     | intersect: -2456190112.5166407
[2025-06-04 05:41:22] 2025-06-04 03:33:55,123 | INFO     | chi2: 1.4762121453447858
[2025-06-04 05:41:22] 2025-06-04 03:33:55,123 | INFO     | current chi2=1.4762121453447858 (change=36.14273109559871 %)
[2025-06-04 05:41:22] 2025-06-04 03:33:55,123 | INFO     | sum of square deviations: 1246386160.0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,124 | INFO     | sum of deviations: 2181545195.9999995
[2025-06-04 05:41:22] 2025-06-04 03:33:55,125 | INFO     | mean x: 1749002570.0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,125 | INFO     | mean y: 2337289.4213836477
[2025-06-04 05:41:22] 2025-06-04 03:33:55,125 | INFO     | -- intersect: -3058935594.3975067
[2025-06-04 05:41:22] 2025-06-04 03:33:55,125 | INFO     | intersect: -3058935594.3975067
[2025-06-04 05:41:22] 2025-06-04 03:33:55,125 | INFO     | chi2: 1.4772544377059638
[2025-06-04 05:41:22] 2025-06-04 03:33:55,125 | INFO     | current chi2=1.4772544377059638 (change=-0.07060586545536665 %)
[2025-06-04 05:41:22] 2025-06-04 03:33:55,125 | INFO     | right removable region: 158
[2025-06-04 05:41:22] 2025-06-04 03:33:55,126 | INFO     | sum of square deviations: 1367709365.0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,127 | INFO     | sum of deviations: -31838430066.5
[2025-06-04 05:41:22] 2025-06-04 03:33:55,127 | INFO     | mean x: 1749003027.5
[2025-06-04 05:41:22] 2025-06-04 03:33:55,127 | INFO     | mean y: 2350250.6036585364
[2025-06-04 05:41:22] 2025-06-04 03:33:55,127 | INFO     | -- intersect: 40716782718.612335
[2025-06-04 05:41:22] 2025-06-04 03:33:55,127 | INFO     | intersect: 40716782718.612335
[2025-06-04 05:41:22] 2025-06-04 03:33:55,127 | INFO     | chi2: 0.8943362656889073
[2025-06-04 05:41:22] 2025-06-04 03:33:55,127 | INFO     | current chi2=0.8943362656889073 (change=61.31323564221457 %)
[2025-06-04 05:41:22] 2025-06-04 03:33:55,128 | INFO     | sum of square deviations: 1246386160.0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,129 | INFO     | sum of deviations: -27288303335.0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,129 | INFO     | mean x: 1749003180.0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,129 | INFO     | mean y: 2344546.352201258
[2025-06-04 05:41:22] 2025-06-04 03:33:55,129 | INFO     | -- intersect: 38294914571.134575
[2025-06-04 05:41:22] 2025-06-04 03:33:55,129 | INFO     | intersect: 38294914571.134575
[2025-06-04 05:41:22] 2025-06-04 03:33:55,129 | INFO     | chi2: 0.885093155645044
[2025-06-04 05:41:22] 2025-06-04 03:33:55,130 | INFO     | current chi2=0.885093155645044 (change=1.0335161838420348 %)
[2025-06-04 05:41:22] 2025-06-04 03:33:55,130 | INFO     | left removable region: 20
[2025-06-04 05:41:22] 2025-06-04 03:33:55,130 | INFO     | sum of square deviations: 814878534.5
[2025-06-04 05:41:22] 2025-06-04 03:33:55,131 | INFO     | sum of deviations: -11152259913.000002
[2025-06-04 05:41:22] 2025-06-04 03:33:55,131 | INFO     | mean x: 1749003149.5
[2025-06-04 05:41:22] 2025-06-04 03:33:55,131 | INFO     | mean y: 2353728.695652174
[2025-06-04 05:41:22] 2025-06-04 03:33:55,131 | INFO     | -- intersect: 23938850870.380512
[2025-06-04 05:41:22] 2025-06-04 03:33:55,131 | INFO     | intersect: 23938850870.380512
[2025-06-04 05:41:22] 2025-06-04 03:33:55,131 | INFO     | chi2: 0.014716230654429108
[2025-06-04 05:41:22] 2025-06-04 03:33:55,132 | INFO     | -- intersect: 23938850870.380512
[2025-06-04 05:41:22] 2025-06-04 03:33:55,132 | INFO     | current memory leak: -13.69 B/s (using 138 data points, chi2=0.01)
[2025-06-04 05:41:22] 2025-06-04 03:33:55,132 | INFO     | ..............................
[2025-06-04 05:41:22] 2025-06-04 03:33:55,133 | INFO     | . Timing measurements:
[2025-06-04 05:41:22] 2025-06-04 03:33:55,133 | INFO     | . get job = 0 s
[2025-06-04 05:41:22] 2025-06-04 03:33:55,133 | INFO     | . initial setup = 1 s
[2025-06-04 05:41:22] 2025-06-04 03:33:55,133 | INFO     | . payload setup = 7 s
[2025-06-04 05:41:22] 2025-06-04 03:33:55,133 | INFO     | . stage-in = 0 s
[2025-06-04 05:41:22] 2025-06-04 03:33:55,133 | INFO     | . payload execution = 10278 s
[2025-06-04 05:41:22] 2025-06-04 03:33:55,133 | INFO     | . stage-out = 0 s
[2025-06-04 05:41:22] 2025-06-04 03:33:55,133 | INFO     | . log creation = 0 s
[2025-06-04 05:41:22] 2025-06-04 03:33:55,133 | INFO     | ..............................
[2025-06-04 05:41:22] 2025-06-04 03:33:55,240 | INFO     | 
[2025-06-04 05:41:22] 2025-06-04 03:33:55,241 | INFO     | job summary report
[2025-06-04 05:41:22] 2025-06-04 03:33:55,241 | INFO     | --------------------------------------------------
[2025-06-04 05:41:22] 2025-06-04 03:33:55,241 | INFO     | PanDA job id: 6677390649
[2025-06-04 05:41:22] 2025-06-04 03:33:55,241 | INFO     | task id: 45006595
[2025-06-04 05:41:22] 2025-06-04 03:33:55,241 | INFO     | errors: (none)
[2025-06-04 05:41:22] 2025-06-04 03:33:55,241 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:41:22] 2025-06-04 03:33:55,241 | INFO     | pilot state: finished 
[2025-06-04 05:41:22] 2025-06-04 03:33:55,241 | INFO     | transexitcode: 0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,241 | INFO     | exeerrorcode: 0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,241 | INFO     | exeerrordiag: 
[2025-06-04 05:41:22] 2025-06-04 03:33:55,241 | INFO     | exitcode: 0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,242 | INFO     | exitmsg: OK
[2025-06-04 05:41:22] 2025-06-04 03:33:55,242 | INFO     | cpuconsumptiontime: 39543 s
[2025-06-04 05:41:22] 2025-06-04 03:33:55,242 | INFO     | nevents: 400
[2025-06-04 05:41:22] 2025-06-04 03:33:55,242 | INFO     | neventsw: 0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,242 | INFO     | pid: 3643167
[2025-06-04 05:41:22] 2025-06-04 03:33:55,242 | INFO     | pgrp: 3643167
[2025-06-04 05:41:22] 2025-06-04 03:33:55,242 | INFO     | corecount: 4
[2025-06-04 05:41:22] 2025-06-04 03:33:55,242 | INFO     | event service: False
[2025-06-04 05:41:22] 2025-06-04 03:33:55,242 | INFO     | sizes: {0: 2405017, 1: 2405216, 5: 2405422, 11: 2405478, 10289: 2434020, 10290: 2442983, 10292: 2443167, 10296: 2443337}
[2025-06-04 05:41:22] 2025-06-04 03:33:55,242 | INFO     | --------------------------------------------------
[2025-06-04 05:41:22] 2025-06-04 03:33:55,242 | INFO     | 
[2025-06-04 05:41:22] 2025-06-04 03:33:55,242 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-06-04 05:41:22] 2025-06-04 03:33:55,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,268 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:41:22] 2025-06-04 03:33:55,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,268 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:41:22] 2025-06-04 03:33:55,268 | INFO     | job 6677390649 has completed (purged errors)
[2025-06-04 05:41:22] 2025-06-04 03:33:55,268 | INFO     | overall cleanup function is called
[2025-06-04 05:41:22] 2025-06-04 03:33:56,275 | INFO     | --- collectZombieJob: --- 10, [3643167]
[2025-06-04 05:41:22] 2025-06-04 03:33:56,276 | INFO     | zombie collector waiting for pid 3643167
[2025-06-04 05:41:22] 2025-06-04 03:33:56,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:41:22] 2025-06-04 03:33:56,276 | INFO     | collected zombie processes
[2025-06-04 05:41:22] 2025-06-04 03:33:56,276 | INFO     | will attempt to kill all subprocesses of pid=3643167
[2025-06-04 05:41:22] 2025-06-04 03:33:56,618 | INFO     | process IDs to be killed: [3643167] (in reverse order)
[2025-06-04 05:41:22] 2025-06-04 03:33:56,740 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:41:22] 2025-06-04 03:33:56,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:41:22] 2025-06-04 03:33:56,752 | INFO     | did not find any defunct processes belonging to 3643167
[2025-06-04 05:41:22] 2025-06-04 03:33:56,764 | INFO     | did not find any defunct processes belonging to 3643167
[2025-06-04 05:41:22] 2025-06-04 03:33:56,764 | INFO     | ready for new job
[2025-06-04 05:41:22] 2025-06-04 03:33:56,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:41:22] 2025-06-04 03:33:56,766 | INFO     | **************************************
[2025-06-04 05:41:22] 2025-06-04 03:33:56,767 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:41:22] 2025-06-04 03:33:56,767 | INFO     | **************************************
[2025-06-04 05:41:22] 2025-06-04 03:33:56,767 | INFO     | 
[2025-06-04 05:41:22] 2025-06-04 03:33:56,771 | INFO     | architecture information:
[2025-06-04 05:41:22] 2025-06-04 03:33:56,772 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:41:22] 2025-06-04 03:33:56,789 | INFO     | cat /etc/os-release:
[2025-06-04 05:41:22] NAME="CentOS Linux"
[2025-06-04 05:41:22] VERSION="7 (Core)"
[2025-06-04 05:41:22] ID="centos"
[2025-06-04 05:41:22] ID_LIKE="rhel fedora"
[2025-06-04 05:41:22] VERSION_ID="7"
[2025-06-04 05:41:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:41:22] ANSI_COLOR="0;31"
[2025-06-04 05:41:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:41:22] HOME_URL="https://www.centos.org/"
[2025-06-04 05:41:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:41:22] 
[2025-06-04 05:41:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:41:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:41:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:41:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:41:22] 
[2025-06-04 05:41:22] 2025-06-04 03:33:56,789 | INFO     | **************************************
[2025-06-04 05:41:22] 2025-06-04 03:33:57,292 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-06-04 05:41:22] 2025-06-04 03:33:57,310 | INFO     | sufficient remaining disk space (643052863488 B)
[2025-06-04 05:41:22] 2025-06-04 03:33:57,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:41:22] 2025-06-04 03:33:57,311 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:41:22] 2025-06-04 03:33:57,311 | INFO     | update_server=False
[2025-06-04 05:41:22] 2025-06-04 03:33:57,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:41:22] 2025-06-04 03:33:57,311 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:41:22] 2025-06-04 03:33:57,312 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:41:22] 2025-06-04 03:33:57,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:41:22] 2025-06-04 03:33:57,312 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:41:22] 2025-06-04 03:33:57,312 | INFO     | aborting loop
[2025-06-04 05:41:22] 2025-06-04 03:33:57,313 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:41:22] 2025-06-04 03:33:57,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:41:22] 2025-06-04 03:33:57,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:41:22] 2025-06-04 03:33:57,907 | INFO     | all data control threads have been joined
[2025-06-04 05:41:22] 2025-06-04 03:33:58,316 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:58,319 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:58,463 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:58,470 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:58,661 | INFO     | all job control threads have been joined
[2025-06-04 05:41:22] 2025-06-04 03:33:58,720 | INFO     | all payload control threads have been joined
[2025-06-04 05:41:22] 2025-06-04 03:33:58,885 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:58,896 | INFO     | [job] validate thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:58,912 | INFO     | [data] control thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:58,937 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:59,314 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:59,458 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:59,464 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:59,651 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:59,666 | INFO     | [job] control thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:33:59,726 | INFO     | [payload] control thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:34:00,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:41:22] 2025-06-04 03:34:01,255 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:34:01,319 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:41:22] 2025-06-04 03:34:02,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23148930742080)>', '<ExcThread(monitor, started 23148692997888)>']
[2025-06-04 05:41:22] 2025-06-04 03:34:02,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:41:22] 2025-06-04 03:34:02,335 | INFO     | [monitor] control thread has ended
[2025-06-04 05:41:22] 2025-06-04 03:34:07,152 | INFO     | all workflow threads have been joined
[2025-06-04 05:41:22] 2025-06-04 03:34:07,153 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:41:22] 2025-06-04 03:34:07,153 | INFO     | traces error code: 0
[2025-06-04 05:41:22] 2025-06-04 03:34:07,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:41:22] 2025-06-04 03:34:07,313 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:41:22] 2025-06-04 03:34:07,316 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:41:22] 2025-06-04 03:34:07,319 [wrapper] pilotpid: 3636204
[2025-06-04 05:41:22] 2025-06-04 03:34:07,322 [wrapper] Pilot exit status: 0
[2025-06-04 05:41:22] 2025-06-04 03:34:07,333 [wrapper] pandaids: 6677390649
[2025-06-04 05:41:22] 2025-06-04 03:34:07,409 [wrapper] cleanup supervisor_pilot 3914072 3636205
[2025-06-04 05:41:22] 2025-06-04 03:34:07,413 [wrapper] Test setup, not cleaning
[2025-06-04 05:41:22] 2025-06-04 03:34:07,416 [wrapper] apfmon messages muted
[2025-06-04 05:41:22] 2025-06-04 03:34:07,419 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:41:22] 2025-06-04 03:34:07,422 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:41:22]  *** Error codes and diagnostics ***
[2025-06-04 05:41:22]     "exeErrorCode": 0,
[2025-06-04 05:41:22]     "exeErrorDiag": "",
[2025-06-04 05:41:22]     "pilotErrorCode": 0,
[2025-06-04 05:41:22]     "pilotErrorDiag": "",
[2025-06-04 05:41:22]  *** Listing of results directory ***
[2025-06-04 05:41:22] total 394708
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc      5111 Jun  2 20:02 queuedata.json
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-04 05:41:22] -rwx------ 1 boinc boinc     37140 Jun  2 20:04 runpilot2-wrapper.sh
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc       100 Jun  4 02:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:41:22] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 02:41 run_atlas
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc       105 Jun  4 02:41 job.xml
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc      6632 Jun  4 02:41 init_data.xml
[2025-06-04 05:41:22] -rw-r--r-- 2 boinc boinc 218272603 Jun  4 02:41 EVNT.45006593._000270.pool.root.1
[2025-06-04 05:41:22] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:41 start_atlas.sh
[2025-06-04 05:41:22] drwxrwx--x 2 boinc boinc      4096 Jun  4 02:41 shared
[2025-06-04 05:41:22] -rw-r--r-- 2 boinc boinc    508869 Jun  4 02:41 input.tar.gz
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc         0 Jun  4 02:41 boinc_lockfile
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc      2521 Jun  4 02:41 pandaJob.out
[2025-06-04 05:41:22] -rw------- 1 boinc boinc    986069 Jun  4 02:42 agis_schedconf.cvmfs.json
[2025-06-04 05:41:22] -rw------- 1 boinc boinc   1603667 Jun  4 02:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:41:22] drwx------ 4 boinc boinc      4096 Jun  4 02:42 pilot3
[2025-06-04 05:41:22] -rw------- 1 boinc boinc 179544745 Jun  4 05:33 HITS.45006595._006737.pool.root.1
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc       529 Jun  4 05:33 boinc_task_state.xml
[2025-06-04 05:41:22] -rw------- 1 boinc boinc      1035 Jun  4 05:33 memory_monitor_summary.json
[2025-06-04 05:41:22] -rw------- 1 boinc boinc    297204 Jun  4 05:33 log.45006595._006737.job.log.tgz.1
[2025-06-04 05:41:22] -rw------- 1 boinc boinc        95 Jun  4 05:33 pilot_heartbeat.json
[2025-06-04 05:41:22] -rw------- 1 boinc boinc      7729 Jun  4 05:33 heartbeat.json
[2025-06-04 05:41:22] -rw------- 1 boinc boinc      4486 Jun  4 05:34 pilotlog.txt
[2025-06-04 05:41:22] -rw------- 1 boinc boinc    968658 Jun  4 05:34 log.45006595._006737.job.log.1
[2025-06-04 05:41:22] -rw------- 1 boinc boinc       357 Jun  4 05:34 output.list
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc       620 Jun  4 05:34 runtime_log
[2025-06-04 05:41:22] -rw------- 1 boinc boinc   1280000 Jun  4 05:34 result.tar.gz
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc      9026 Jun  4 05:34 runtime_log.err
[2025-06-04 05:41:22] -rw------- 1 boinc boinc       665 Jun  4 05:34 KaoKDmchOg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwufKDmeAH9Jo.diag
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc        26 Jun  4 05:41 wrapper_checkpoint.txt
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc      8192 Jun  4 05:41 boinc_mmap_file
[2025-06-04 05:41:22] -rw-r--r-- 1 boinc boinc     20666 Jun  4 05:41 stderr.txt
[2025-06-04 05:41:22] HITS file was successfully produced:
[2025-06-04 05:41:22] -rw------- 1 boinc boinc 179544745 Jun  4 05:33 shared/HITS.pool.root.1
[2025-06-04 05:41:22]  *** Contents of shared directory: ***
[2025-06-04 05:41:22] total 390272
[2025-06-04 05:41:22] -rw-r--r-- 2 boinc boinc 218272603 Jun  4 02:41 ATLAS.root_0
[2025-06-04 05:41:22] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:41 start_atlas.sh
[2025-06-04 05:41:22] -rw-r--r-- 2 boinc boinc    508869 Jun  4 02:41 input.tar.gz
[2025-06-04 05:41:22] -rw------- 1 boinc boinc 179544745 Jun  4 05:33 HITS.pool.root.1
[2025-06-04 05:41:22] -rw------- 1 boinc boinc   1280000 Jun  4 05:34 result.tar.gz
05:41:24 (3632530): run_atlas exited; CPU time 39940.893937
05:41:24 (3632530): called boinc_finish(0)

</stderr_txt>
]]>

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