Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-03 06:20:11 (12992): Detected: vboxwrapper 26206
2025-06-03 06:20:11 (12992): Detected: BOINC client v8.0.2
2025-06-03 06:20:12 (12992): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-06-03 06:20:12 (12992): Successfully copied 'init_data.xml' to the shared directory.
2025-06-03 06:20:13 (12992): Create VM. (boinc_c43b0a97672d45f9, slot#1)
2025-06-03 06:20:13 (12992): Setting Memory Size for VM. (4800MB)
2025-06-03 06:20:13 (12992): Setting CPU Count for VM. (8)
2025-06-03 06:20:14 (12992): Setting Chipset Options for VM.
2025-06-03 06:20:14 (12992): Setting Graphics Controller Options for VM.
2025-06-03 06:20:14 (12992): Setting Boot Options for VM.
2025-06-03 06:20:14 (12992): Setting Network Configuration for NAT.
2025-06-03 06:20:15 (12992): Enabling VM Network Access.
2025-06-03 06:20:15 (12992): Disabling USB Support for VM.
2025-06-03 06:20:15 (12992): Disabling COM Port Support for VM.
2025-06-03 06:20:15 (12992): Disabling LPT Port Support for VM.
2025-06-03 06:20:16 (12992): Disabling Audio Support for VM.
2025-06-03 06:20:16 (12992): Disabling Clipboard Support for VM.
2025-06-03 06:20:16 (12992): Disabling Drag and Drop Support for VM.
2025-06-03 06:20:16 (12992): Adding storage controller(s) to VM.
2025-06-03 06:20:17 (12992): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-03 06:20:20 (12992): Adding VirtualBox Guest Additions to VM.
2025-06-03 06:20:20 (12992): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-03 06:20:20 (12992): forwarding host port 61425 to guest port 80
2025-06-03 06:20:20 (12992): Enabling remote desktop for VM.
2025-06-03 06:20:21 (12992): Required extension pack not installed, remote desktop not enabled.
2025-06-03 06:20:21 (12992): Enabling shared directory for VM.
2025-06-03 06:20:21 (12992): Starting VM using VBoxManage interface. (boinc_c43b0a97672d45f9, slot#1)
2025-06-03 06:20:27 (12992): Successfully started VM. (PID = '27456')
2025-06-03 06:20:27 (12992): Reporting VM Process ID to BOINC.
2025-06-03 06:20:27 (12992): Guest Log: BIOS: VirtualBox 7.0.6
2025-06-03 06:20:27 (12992): Guest Log: CPUID EDX: 0x178bfbff
2025-06-03 06:20:27 (12992): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-03 06:20:27 (12992): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-03 06:20:27 (12992): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-03 06:20:27 (12992): Detected: Web Application Enabled (http://localhost:61425)
2025-06-03 06:20:27 (12992): Preference change detected
2025-06-03 06:20:27 (12992): Setting CPU throttle for VM. (100%)
2025-06-03 06:20:28 (12992): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-03 06:20:29 (12992): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-03 06:20:29 (12992): Guest Log: BIOS: Booting from Hard Disk...
2025-06-03 06:20:31 (12992): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-03 06:20:31 (12992): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-03 06:20:31 (12992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-03 06:20:38 (12992): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-03 06:20:38 (12992): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-03 06:20:42 (12992): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-03 06:20:42 (12992): Guest Log: 00:00:00.000140 main     Log opened 2025-06-03T06:20:40.245805000Z
2025-06-03 06:20:42 (12992): Guest Log: 00:00:00.000224 main     OS Product: Linux
2025-06-03 06:20:42 (12992): Guest Log: 00:00:00.000252 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-03 06:20:42 (12992): Guest Log: 00:00:00.000273 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-03 06:20:42 (12992): Guest Log: 00:00:00.000294 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-03 06:20:42 (12992): Guest Log: 00:00:00.000295 main     Process ID: 1366
2025-06-03 06:20:42 (12992): Guest Log: 00:00:00.000295 main     Package type: LINUX_64BITS_GENERIC
2025-06-03 06:20:42 (12992): Guest Log: 00:00:00.001450 main     5.2.32 r132073 started. Verbose level = 0
2025-06-03 06:20:42 (12992): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-03 06:20:42 (12992): Guest Log: [INFO] Mounting shared directory
2025-06-03 06:20:42 (12992): Guest Log: [INFO] Checking for init_data.xml
2025-06-03 06:20:52 (12992): Guest Log: 00:00:10.002846 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 877 802 000ns (GuestNow=1 748 928 052 370 333 000 ns GuestLast=1 748 931 640 248 135 000 ns fSetTimeLastLoop=true )
2025-06-03 06:21:07 (12992): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-03 06:21:07 (12992): Guest Log: [INFO] Detected branch: prod
2025-06-03 06:21:10 (12992): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-03 06:21:10 (12992): Guest Log: Copying input files
2025-06-03 06:21:11 (12992): Guest Log: Copied input files into RunAtlas.
2025-06-03 06:21:11 (12992): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-03 06:21:11 (12992): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-03 06:21:11 (12992): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-03 06:21:11 (12992): Guest Log: Further information can be found at the LHC@home message board.
2025-06-03 06:21:47 (12992): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-03 06:21:50 (12992): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-03 06:21:50 (12992): Guest Log: 2.6.3.0 1664 0 32348 146731 4 1 3120513 4096000 0 65024 0 0 n/a 1290 110 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-03 06:21:50 (12992): Guest Log: copied the webapp to /var/www
2025-06-03 06:21:50 (12992): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-03 06:21:50 (12992): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-03 06:21:53 (12992): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-03 06:21:53 (12992): Guest Log:  *** Starting ATLAS job. (PandaID=6677384191 taskID=45006595) ***
2025-06-03 06:53:44 (12992): VM state change detected. (old = 'running', new = 'paused')
2025-06-03 07:28:55 (12992): VM state change detected. (old = 'paused', new = 'running')
2025-06-03 07:29:03 (12992): Guest Log: 00:33:10.881558 timesync vgsvcTimeSyncWorker: Radical host time change: 2 120 249 000 000ns (HostNow=1 748 932 143 474 000 000 ns HostLast=1 748 930 023 225 000 000 ns)
2025-06-03 07:29:13 (12992): Guest Log: 00:33:20.888029 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 120 231 899 000ns (GuestNow=1 748 932 153 480 540 000 ns GuestLast=1 748 930 033 248 641 000 ns fSetTimeLastLoop=true )
2025-06-03 08:17:57 (12992): Guest Log:  *** Job finished ***
2025-06-03 08:17:57 (12992): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:48,078 | INFO     | [payload] failed_post thread has finished
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:48,582 | INFO     | [payload] control thread has finished
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:49,977 | INFO     | [data] queue_monitor thread has finished
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:50,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140547116697408)>', '<ExcThread(monitor, started 140546068694784)>']
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:51,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:51,013 | INFO     | [monitor] control thread has ended
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,253 | INFO     | all workflow threads have been joined
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,253 | INFO     | end of generic workflow (traces error code: 0)
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,254 | INFO     | traces error code: 0
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,254 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,332 [wrapper] ==== pilot stdout END ====
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,337 [wrapper] ==== wrapper stdout RESUME ====
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,341 [wrapper] pilotpid: 6042
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,346 [wrapper] Pilot exit status: 0
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,436 [wrapper] pandaids: 6677384191
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,464 [wrapper] cleanup supervisor_pilot 25023 6043
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,469 [wrapper] Test setup, not cleaning
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,474 [wrapper] apfmon messages muted
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,479 [wrapper] ==== wrapper stdout END ====
2025-06-03 08:17:57 (12992): Guest Log: 2025-06-03 07:17:55,483 [wrapper] ==== wrapper stderr END ====
2025-06-03 08:17:57 (12992): Guest Log:  *** Error codes and diagnostics ***
2025-06-03 08:17:57 (12992): Guest Log:     "exeErrorCode": 0,
2025-06-03 08:17:57 (12992): Guest Log:     "exeErrorDiag": "",
2025-06-03 08:17:57 (12992): Guest Log:     "pilotErrorCode": 0,
2025-06-03 08:17:57 (12992): Guest Log:     "pilotErrorDiag": "",
2025-06-03 08:17:57 (12992): Guest Log:  *** Listing of results directory ***
2025-06-03 08:17:57 (12992): Guest Log: total 185772
2025-06-03 08:17:57 (12992): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  2 16:11 pilot3.tar.gz
2025-06-03 08:17:57 (12992): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  2 16:38 queuedata.json
2025-06-03 08:17:57 (12992): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  2 16:38 runpilot2-wrapper.sh
2025-06-03 08:17:57 (12992): Guest Log: -rwxr-xr-x. 1 atlas atlas      9130 Jun  3 05:21 init_data.xml
2025-06-03 08:17:57 (12992): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 Jun  3 05:21 input.tar.gz
2025-06-03 08:17:57 (12992): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  3 05:21 start_atlas.sh
2025-06-03 08:17:57 (12992): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  3 05:21 EVNT.45006593._000161.pool.root.1 -> /data/./ATLAS.root_0
2025-06-03 08:17:57 (12992): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Jun  3 05:21 pandaJob.out
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas    986901 Jun  3 05:25 agis_schedconf.cvmfs.json
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  3 05:25 agis_ddmendpoints.agis.ALL.json
2025-06-03 08:17:57 (12992): Guest Log: drwx------. 4 atlas atlas      4096 Jun  3 05:25 pilot3
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas 185083085 Jun  3 07:16 HITS.45006595._004011.pool.root.1
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas      1033 Jun  3 07:16 memory_monitor_summary.json
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas    292360 Jun  3 07:16 log.45006595._004011.job.log.tgz.1
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas        97 Jun  3 07:17 pilot_heartbeat.json
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas      7729 Jun  3 07:17 heartbeat.json
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas      4536 Jun  3 07:17 pilotlog.txt
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas    399814 Jun  3 07:17 log.45006595._004011.job.log.1
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas       357 Jun  3 07:17 output.list
2025-06-03 08:17:57 (12992): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  3 07:17 runtime_log
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas    706560 Jun  3 07:17 result.tar.gz
2025-06-03 08:17:57 (12992): Guest Log: -rw-r--r--. 1 atlas atlas      8583 Jun  3 07:17 runtime_log.err
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas       650 Jun  3 07:17 4FTNDmvLNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCSfKDmuEBf0m.diag
2025-06-03 08:17:57 (12992): Guest Log: Looking for outputfile HITS.45006595._004011.pool.root.1
2025-06-03 08:17:57 (12992): Guest Log: HITS file was successfully produced
2025-06-03 08:17:57 (12992): Guest Log: -rw-------. 1 atlas atlas 185083085 Jun  3 07:16 /home/atlas/RunAtlas/HITS.45006595._004011.pool.root.1
2025-06-03 08:17:58 (12992): Guest Log: Successfully finished the ATLAS job!
2025-06-03 08:17:58 (12992): Guest Log: Copying the results back to the shared directory!
2025-06-03 08:17:58 (12992): Guest Log:  *** Contents of shared directory: ***
2025-06-03 08:17:58 (12992): Guest Log: total 390688
2025-06-03 08:17:58 (12992): Guest Log: -rwxrwxrwx. 1 root root 213728769 Jun  3 05:20 ATLAS.root_0
2025-06-03 08:17:58 (12992): Guest Log: -rwxrwxrwx. 1 root root 185083085 Jun  3 07:17 HITS.pool.root.1
2025-06-03 08:17:58 (12992): Guest Log: -rwxrwxrwx. 1 root root      9130 Jun  3 05:20 init_data.xml
2025-06-03 08:17:58 (12992): Guest Log: -rwxrwxrwx. 1 root root    508877 Jun  2 20:22 input.tar.gz
2025-06-03 08:17:58 (12992): Guest Log: -rwxrwxrwx. 1 root root    706560 Jun  3 07:17 result.tar.gz
2025-06-03 08:17:58 (12992): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  2 20:22 start_atlas.sh
2025-06-03 08:17:58 (12992): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-03 08:17:58 (12992): VM Completion File Detected.
2025-06-03 08:17:58 (12992): Powering off VM.
2025-06-03 08:17:58 (12992): Successfully stopped VM.
2025-06-03 08:17:58 (12992): Deregistering VM. (boinc_c43b0a97672d45f9, slot#1)
2025-06-03 08:17:58 (12992): Removing network bandwidth throttle group from VM.
2025-06-03 08:17:59 (12992): Removing VM from VirtualBox.
08:18:04 (12992): called boinc_finish(0)

</stderr_txt>
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