Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:57:27 (4977): wrapper (7.7.26015): starting
08:57:27 (4977): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:57:27] Arguments: --nthreads 8
[2025-06-03 08:57:27] Threads: 8
[2025-06-03 08:57:27] Checking for CVMFS
[2025-06-03 08:57:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:57:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:57:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:57:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:57:28] 2.11.2.0 20340 31603 94912 146731 0 114 14663489 25165825 4362 130560 0 16034664 99.804 16991733 2465 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:57:28] CVMFS is ok
[2025-06-03 08:57:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:57:28] Checking for apptainer binary...
[2025-06-03 08:57:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:57:28] Running /usr/bin/apptainer --version
[2025-06-03 08:57:29] apptainer version 1.3.2-1.el7
[2025-06-03 08:57:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:57:30] cg-vwn373.simple-grid.lan
[2025-06-03 08:57:30] apptainer works
[2025-06-03 08:57:30] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:57:30] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:57:30] Starting ATLAS job with PandaID=6677393989
[2025-06-03 08:57:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:12:59]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:12:59] 2025-06-03 10:48:53,807 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:12:59] 2025-06-03 10:48:53,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:12:59] 2025-06-03 10:48:53,807 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:12:59] 2025-06-03 10:48:53,807 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:12:59] 2025-06-03 10:48:53,812 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:12:59] 2025-06-03 10:48:53,813 | INFO     | sum of square deviations: 3531973200.0
[2025-06-03 14:12:59] 2025-06-03 10:48:53,815 | INFO     | sum of deviations: -11097021972.999992
[2025-06-03 14:12:59] 2025-06-03 10:48:53,816 | INFO     | mean x: 1748940760.0
[2025-06-03 14:12:59] 2025-06-03 10:48:53,816 | INFO     | mean y: 2490022.6044444446
[2025-06-03 14:12:59] 2025-06-03 10:48:53,816 | INFO     | -- intersect: 5497445092.817125
[2025-06-03 14:12:59] 2025-06-03 10:48:53,816 | INFO     | intersect: 5497445092.817125
[2025-06-03 14:12:59] 2025-06-03 10:48:53,816 | INFO     | chi2: 2.614531955966557
[2025-06-03 14:12:59] 2025-06-03 10:48:53,817 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 14:12:59] 2025-06-03 10:48:53,819 | INFO     | sum of deviations: 4312779330.500005
[2025-06-03 14:12:59] 2025-06-03 10:48:53,819 | INFO     | mean x: 1748940607.5
[2025-06-03 14:12:59] 2025-06-03 10:48:53,819 | INFO     | mean y: 2500045.959090909
[2025-06-03 14:12:59] 2025-06-03 10:48:53,819 | INFO     | -- intersect: -2282019118.13746
[2025-06-03 14:12:59] 2025-06-03 10:48:53,819 | INFO     | intersect: -2282019118.13746
[2025-06-03 14:12:59] 2025-06-03 10:48:53,819 | INFO     | chi2: 1.8066530719035072
[2025-06-03 14:12:59] 2025-06-03 10:48:53,820 | INFO     | current chi2=1.8066530719035072 (change=30.899560520551677 %)
[2025-06-03 14:12:59] 2025-06-03 10:48:53,820 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 14:12:59] 2025-06-03 10:48:53,822 | INFO     | sum of deviations: 4208421720.000002
[2025-06-03 14:12:59] 2025-06-03 10:48:53,822 | INFO     | mean x: 1748940455.0
[2025-06-03 14:12:59] 2025-06-03 10:48:53,822 | INFO     | mean y: 2499973.6139534884
[2025-06-03 14:12:59] 2025-06-03 10:48:53,822 | INFO     | -- intersect: -2385915458.3580823
[2025-06-03 14:12:59] 2025-06-03 10:48:53,822 | INFO     | intersect: -2385915458.3580823
[2025-06-03 14:12:59] 2025-06-03 10:48:53,822 | INFO     | chi2: 1.8069834064349388
[2025-06-03 14:12:59] 2025-06-03 10:48:53,823 | INFO     | current chi2=1.8069834064349388 (change=-0.018284336742281405 %)
[2025-06-03 14:12:59] 2025-06-03 10:48:53,823 | INFO     | right removable region: 214
[2025-06-03 14:12:59] 2025-06-03 10:48:53,823 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 14:12:59] 2025-06-03 10:48:53,825 | INFO     | sum of deviations: -49038564381.5
[2025-06-03 14:12:59] 2025-06-03 10:48:53,825 | INFO     | mean x: 1748940912.5
[2025-06-03 14:12:59] 2025-06-03 10:48:53,825 | INFO     | mean y: 2514929.1227272726
[2025-06-03 14:12:59] 2025-06-03 10:48:53,825 | INFO     | -- intersect: 25978701295.538677
[2025-06-03 14:12:59] 2025-06-03 10:48:53,826 | INFO     | intersect: 25978701295.538677
[2025-06-03 14:12:59] 2025-06-03 10:48:53,826 | INFO     | chi2: 1.0164731002173895
[2025-06-03 14:12:59] 2025-06-03 10:48:53,826 | INFO     | current chi2=1.0164731002173895 (change=61.12217722572784 %)
[2025-06-03 14:12:59] 2025-06-03 10:48:53,826 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 14:12:59] 2025-06-03 10:48:53,828 | INFO     | sum of deviations: -48495218441.0
[2025-06-03 14:12:59] 2025-06-03 10:48:53,828 | INFO     | mean x: 1748941065.0
[2025-06-03 14:12:59] 2025-06-03 10:48:53,828 | INFO     | mean y: 2514516.0465116277
[2025-06-03 14:12:59] 2025-06-03 10:48:53,829 | INFO     | -- intersect: 27525128979.619488
[2025-06-03 14:12:59] 2025-06-03 10:48:53,829 | INFO     | intersect: 27525128979.619488
[2025-06-03 14:12:59] 2025-06-03 10:48:53,829 | INFO     | chi2: 0.9992476426599369
[2025-06-03 14:12:59] 2025-06-03 10:48:53,829 | INFO     | current chi2=0.9992476426599369 (change=1.6946299468002233 %)
[2025-06-03 14:12:59] 2025-06-03 10:48:53,829 | INFO     | left removable region: 20
[2025-06-03 14:12:59] 2025-06-03 10:48:53,830 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 14:12:59] 2025-06-03 10:48:53,831 | INFO     | sum of deviations: -18891793177.499996
[2025-06-03 14:12:59] 2025-06-03 10:48:53,831 | INFO     | mean x: 1748941034.5
[2025-06-03 14:12:59] 2025-06-03 10:48:53,831 | INFO     | mean y: 2515314.1907216497
[2025-06-03 14:12:59] 2025-06-03 10:48:53,832 | INFO     | -- intersect: 14596580294.042673
[2025-06-03 14:12:59] 2025-06-03 10:48:53,832 | INFO     | intersect: 14596580294.042673
[2025-06-03 14:12:59] 2025-06-03 10:48:53,832 | INFO     | chi2: 0.12799910516511206
[2025-06-03 14:12:59] 2025-06-03 10:48:53,832 | INFO     | -- intersect: 14596580294.042673
[2025-06-03 14:12:59] 2025-06-03 10:48:53,832 | INFO     | current memory leak: -8.34 B/s (using 194 data points, chi2=0.13)
[2025-06-03 14:12:59] 2025-06-03 10:48:53,833 | INFO     | ..............................
[2025-06-03 14:12:59] 2025-06-03 10:48:53,833 | INFO     | . Timing measurements:
[2025-06-03 14:12:59] 2025-06-03 10:48:53,833 | INFO     | . get job = 0 s
[2025-06-03 14:12:59] 2025-06-03 10:48:53,834 | INFO     | . initial setup = 3 s
[2025-06-03 14:12:59] 2025-06-03 10:48:53,834 | INFO     | . payload setup = 14 s
[2025-06-03 14:12:59] 2025-06-03 10:48:53,834 | INFO     | . stage-in = 0 s
[2025-06-03 14:12:59] 2025-06-03 10:48:53,834 | INFO     | . payload execution = 13734 s
[2025-06-03 14:12:59] 2025-06-03 10:48:53,834 | INFO     | . stage-out = 3 s
[2025-06-03 14:12:59] 2025-06-03 10:48:53,834 | INFO     | . log creation = 1 s
[2025-06-03 14:12:59] 2025-06-03 10:48:53,834 | INFO     | ..............................
[2025-06-03 14:12:59] 2025-06-03 10:48:54,035 | INFO     | 
[2025-06-03 14:12:59] 2025-06-03 10:48:54,035 | INFO     | job summary report
[2025-06-03 14:12:59] 2025-06-03 10:48:54,036 | INFO     | --------------------------------------------------
[2025-06-03 14:12:59] 2025-06-03 10:48:54,036 | INFO     | PanDA job id: 6677393989
[2025-06-03 14:12:59] 2025-06-03 10:48:54,036 | INFO     | task id: 45006595
[2025-06-03 14:12:59] 2025-06-03 10:48:54,036 | INFO     | errors: (none)
[2025-06-03 14:12:59] 2025-06-03 10:48:54,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:12:59] 2025-06-03 10:48:54,036 | INFO     | pilot state: finished 
[2025-06-03 14:12:59] 2025-06-03 10:48:54,036 | INFO     | transexitcode: 0
[2025-06-03 14:12:59] 2025-06-03 10:48:54,036 | INFO     | exeerrorcode: 0
[2025-06-03 14:12:59] 2025-06-03 10:48:54,036 | INFO     | exeerrordiag: 
[2025-06-03 14:12:59] 2025-06-03 10:48:54,036 | INFO     | exitcode: 0
[2025-06-03 14:12:59] 2025-06-03 10:48:54,037 | INFO     | exitmsg: OK
[2025-06-03 14:12:59] 2025-06-03 10:48:54,037 | INFO     | cpuconsumptiontime: 50611 s
[2025-06-03 14:12:59] 2025-06-03 10:48:54,037 | INFO     | nevents: 400
[2025-06-03 14:12:59] 2025-06-03 10:48:54,037 | INFO     | neventsw: 0
[2025-06-03 14:12:59] 2025-06-03 10:48:54,037 | INFO     | pid: 19134
[2025-06-03 14:12:59] 2025-06-03 10:48:54,037 | INFO     | pgrp: 19134
[2025-06-03 14:12:59] 2025-06-03 10:48:54,037 | INFO     | corecount: 8
[2025-06-03 14:12:59] 2025-06-03 10:48:54,037 | INFO     | event service: False
[2025-06-03 14:12:59] 2025-06-03 10:48:54,037 | INFO     | sizes: {0: 2405007, 1: 2405206, 2: 2405206, 11: 2405440, 12: 2405468, 13752: 2435413, 13757: 2444356, 13759: 2444412, 13840: 2444582}
[2025-06-03 14:12:59] 2025-06-03 10:48:54,037 | INFO     | --------------------------------------------------
[2025-06-03 14:12:59] 2025-06-03 10:48:54,037 | INFO     | 
[2025-06-03 14:12:59] 2025-06-03 10:48:54,038 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-03 14:12:59] 2025-06-03 10:48:54,115 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,116 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,116 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,116 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,116 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,116 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,116 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,116 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,117 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,117 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:12:59] 2025-06-03 10:48:54,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,118 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:12:59] 2025-06-03 10:48:54,118 | INFO     | job 6677393989 has completed (purged errors)
[2025-06-03 14:12:59] 2025-06-03 10:48:54,118 | INFO     | overall cleanup function is called
[2025-06-03 14:12:59] 2025-06-03 10:48:55,126 | INFO     | --- collectZombieJob: --- 10, [19134]
[2025-06-03 14:12:59] 2025-06-03 10:48:55,127 | INFO     | zombie collector waiting for pid 19134
[2025-06-03 14:12:59] 2025-06-03 10:48:55,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:12:59] 2025-06-03 10:48:55,127 | INFO     | collected zombie processes
[2025-06-03 14:12:59] 2025-06-03 10:48:55,127 | INFO     | will attempt to kill all subprocesses of pid=19134
[2025-06-03 14:12:59] 2025-06-03 10:48:55,245 | INFO     | process IDs to be killed: [19134] (in reverse order)
[2025-06-03 14:12:59] 2025-06-03 10:48:55,863 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:12:59] 2025-06-03 10:48:55,864 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:12:59] 2025-06-03 10:48:55,867 | INFO     | did not find any defunct processes belonging to 19134
[2025-06-03 14:12:59] 2025-06-03 10:48:55,878 | INFO     | did not find any defunct processes belonging to 19134
[2025-06-03 14:12:59] 2025-06-03 10:48:55,878 | INFO     | ready for new job
[2025-06-03 14:12:59] 2025-06-03 10:48:55,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:12:59] 2025-06-03 10:48:55,880 | INFO     | **************************************
[2025-06-03 14:12:59] 2025-06-03 10:48:55,881 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:12:59] 2025-06-03 10:48:55,881 | INFO     | **************************************
[2025-06-03 14:12:59] 2025-06-03 10:48:55,881 | INFO     | 
[2025-06-03 14:12:59] 2025-06-03 10:48:55,881 | INFO     | pilot is running in a VM
[2025-06-03 14:12:59] 2025-06-03 10:48:55,882 | INFO     | architecture information:
[2025-06-03 14:12:59] 2025-06-03 10:48:55,896 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:12:59] 2025-06-03 10:48:56,127 | INFO     | cat /etc/os-release:
[2025-06-03 14:12:59] NAME="CentOS Linux"
[2025-06-03 14:12:59] VERSION="7 (Core)"
[2025-06-03 14:12:59] ID="centos"
[2025-06-03 14:12:59] ID_LIKE="rhel fedora"
[2025-06-03 14:12:59] VERSION_ID="7"
[2025-06-03 14:12:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:12:59] ANSI_COLOR="0;31"
[2025-06-03 14:12:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:12:59] HOME_URL="https://www.centos.org/"
[2025-06-03 14:12:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:12:59] 
[2025-06-03 14:12:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:12:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:12:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:12:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:12:59] 
[2025-06-03 14:12:59] 2025-06-03 10:48:56,127 | INFO     | **************************************
[2025-06-03 14:12:59] 2025-06-03 10:48:56,631 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-03 14:12:59] 2025-06-03 10:48:56,901 | INFO     | sufficient remaining disk space (497116250112 B)
[2025-06-03 14:12:59] 2025-06-03 10:48:56,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:12:59] 2025-06-03 10:48:56,902 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:12:59] 2025-06-03 10:48:56,902 | INFO     | update_server=False
[2025-06-03 14:12:59] 2025-06-03 10:48:56,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:12:59] 2025-06-03 10:48:56,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:12:59] 2025-06-03 10:48:56,907 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:12:59] 2025-06-03 10:48:56,908 | INFO     | aborting loop
[2025-06-03 14:12:59] 2025-06-03 10:48:56,991 | INFO     | PID=10070 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 14:12:59] 2025-06-03 10:48:56,991 | INFO     | .. there are 9 such processes running
[2025-06-03 14:12:59] 2025-06-03 10:48:56,992 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:12:59] 2025-06-03 10:48:56,992 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:12:59] 2025-06-03 10:48:56,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:12:59] 2025-06-03 10:48:57,117 | INFO     | all data control threads have been joined
[2025-06-03 14:12:59] 2025-06-03 10:48:57,621 | INFO     | all payload control threads have been joined
[2025-06-03 14:12:59] 2025-06-03 10:48:57,908 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:57,914 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:58,012 | INFO     | all job control threads have been joined
[2025-06-03 14:12:59] 2025-06-03 10:48:58,123 | INFO     | [data] control thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:58,195 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:58,287 | INFO     | [job] validate thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:58,628 | INFO     | [payload] control thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:58,709 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:58,737 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:58,866 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:58,909 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:59,018 | INFO     | [job] control thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:59,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:12:59] 2025-06-03 10:48:59,049 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:59,271 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:48:59,389 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:49:00,053 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:49:00,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:12:59] 2025-06-03 10:49:04,234 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:12:59] 2025-06-03 10:49:06,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507640833856)>', '<ExcThread(monitor, started 140506902296320)>']
[2025-06-03 14:12:59] 2025-06-03 10:49:07,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:12:59] 2025-06-03 10:49:07,050 | INFO     | [monitor] control thread has ended
[2025-06-03 14:12:59] 2025-06-03 10:49:11,247 | INFO     | all workflow threads have been joined
[2025-06-03 14:12:59] 2025-06-03 10:49:11,248 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:12:59] 2025-06-03 10:49:11,248 | INFO     | traces error code: 0
[2025-06-03 14:12:59] 2025-06-03 10:49:11,248 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:12:59] 2025-06-03 10:49:11,488 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:12:59] 2025-06-03 10:49:11,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:12:59] 2025-06-03 10:49:11,628 [wrapper] pilotpid: 10070
[2025-06-03 14:12:59] 2025-06-03 10:49:11,777 [wrapper] Pilot exit status: 0
[2025-06-03 14:12:59] 2025-06-03 10:49:12,219 [wrapper] pandaids: 6677393989
[2025-06-03 14:12:59] 2025-06-03 10:49:12,471 [wrapper] cleanup supervisor_pilot 25284 10071
[2025-06-03 14:12:59] 2025-06-03 10:49:12,495 [wrapper] Test setup, not cleaning
[2025-06-03 14:12:59] 2025-06-03 10:49:12,523 [wrapper] apfmon messages muted
[2025-06-03 14:12:59] 2025-06-03 10:49:12,540 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:12:59] 2025-06-03 10:49:12,656 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:12:59]  *** Error codes and diagnostics ***
[2025-06-03 14:12:59]     "exeErrorCode": 0,
[2025-06-03 14:12:59]     "exeErrorDiag": "",
[2025-06-03 14:12:59]     "pilotErrorCode": 0,
[2025-06-03 14:12:59]     "pilotErrorDiag": "",
[2025-06-03 14:12:59]  *** Listing of results directory ***
[2025-06-03 14:12:59] total 394416
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:02 pilot3.tar.gz
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:14 queuedata.json
[2025-06-03 14:12:59] -rwx------. 1 boinc boinc     37140 Jun  2 21:14 runpilot2-wrapper.sh
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:12:59] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:57 run_atlas
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:57 job.xml
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc      6393 Jun  3 08:57 init_data.xml
[2025-06-03 14:12:59] -rw-r--r--. 2 boinc boinc 212763814 Jun  3 08:57 EVNT.45006593._000357.pool.root.1
[2025-06-03 14:12:59] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:57 start_atlas.sh
[2025-06-03 14:12:59] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:57 shared
[2025-06-03 14:12:59] -rw-r--r--. 2 boinc boinc    508870 Jun  3 08:57 input.tar.gz
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:57 boinc_lockfile
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc      2521 Jun  3 08:57 pandaJob.out
[2025-06-03 14:12:59] -rw-------. 1 boinc boinc    986901 Jun  3 08:57 agis_schedconf.cvmfs.json
[2025-06-03 14:12:59] drwx------. 4 boinc boinc      4096 Jun  3 08:57 pilot3
[2025-06-03 14:12:59] -rw-------. 1 boinc boinc 184117705 Jun  3 12:46 HITS.45006595._008917.pool.root.1
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc       531 Jun  3 12:46 boinc_task_state.xml
[2025-06-03 14:12:59] -rw-------. 1 boinc boinc      1021 Jun  3 12:47 memory_monitor_summary.json
[2025-06-03 14:12:59] -rw-------. 1 boinc boinc   1603667 Jun  3 12:47 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:12:59] -rw-------. 1 boinc boinc    388762 Jun  3 12:47 log.45006595._008917.job.log.tgz.1
[2025-06-03 14:12:59] -rw-------. 1 boinc boinc        95 Jun  3 12:47 pilot_heartbeat.json
[2025-06-03 14:12:59] -rw-------. 1 boinc boinc      7690 Jun  3 12:48 heartbeat.json
[2025-06-03 14:12:59] -rw-------. 1 boinc boinc      4809 Jun  3 12:49 pilotlog.txt
[2025-06-03 14:12:59] -rw-------. 1 boinc boinc   1203297 Jun  3 12:49 log.45006595._008917.job.log.1
[2025-06-03 14:12:59] -rw-------. 1 boinc boinc       357 Jun  3 12:49 output.list
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:49 runtime_log
[2025-06-03 14:12:59] -rw-------. 1 boinc boinc   1607680 Jun  3 12:49 result.tar.gz
[2025-06-03 14:12:59] -rw-------. 1 boinc boinc       656 Jun  3 12:49 SxTKDm6mPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEFgKDmwCRl4n.diag
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc      8673 Jun  3 12:49 runtime_log.err
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc      8192 Jun  3 14:12 boinc_mmap_file
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc        28 Jun  3 14:12 wrapper_checkpoint.txt
[2025-06-03 14:12:59] -rw-r--r--. 1 boinc boinc     20570 Jun  3 14:12 stderr.txt
[2025-06-03 14:13:00] HITS file was successfully produced:
[2025-06-03 14:13:00] -rw-------. 1 boinc boinc 184117705 Jun  3 12:46 shared/HITS.pool.root.1
[2025-06-03 14:13:00]  *** Contents of shared directory: ***
[2025-06-03 14:13:00] total 389672
[2025-06-03 14:13:00] -rw-r--r--. 2 boinc boinc 212763814 Jun  3 08:57 ATLAS.root_0
[2025-06-03 14:13:00] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:57 start_atlas.sh
[2025-06-03 14:13:00] -rw-r--r--. 2 boinc boinc    508870 Jun  3 08:57 input.tar.gz
[2025-06-03 14:13:00] -rw-------. 1 boinc boinc 184117705 Jun  3 12:46 HITS.pool.root.1
[2025-06-03 14:13:00] -rw-------. 1 boinc boinc   1607680 Jun  3 12:49 result.tar.gz
14:13:01 (4977): run_atlas exited; CPU time 50783.655901
14:13:01 (4977): called boinc_finish(0)

</stderr_txt>
]]>

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